View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1375_low_33 (Length: 223)

Name: NF1375_low_33
Description: NF1375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1375_low_33
NF1375_low_33
[»] chr5 (37 HSPs)
chr5 (30-134)||(38942984-38943086)
chr5 (161-223)||(18183456-18183518)
chr5 (167-223)||(2865242-2865298)
chr5 (167-223)||(5819416-5819472)
chr5 (167-223)||(19359623-19359679)
chr5 (168-223)||(5818932-5818987)
chr5 (168-223)||(15372360-15372415)
chr5 (167-221)||(8647440-8647494)
chr5 (161-223)||(8647925-8647987)
chr5 (166-215)||(14215242-14215291)
chr5 (167-223)||(164193-164249)
chr5 (167-223)||(19359138-19359194)
chr5 (167-223)||(24362323-24362379)
chr5 (157-215)||(15708963-15709021)
chr5 (161-223)||(24331555-24331617)
chr5 (167-220)||(8461421-8461474)
chr5 (158-223)||(29455229-29455294)
chr5 (168-223)||(18182973-18183028)
chr5 (167-221)||(4623150-4623204)
chr5 (167-220)||(7349507-7349560)
chr5 (158-223)||(8460923-8460988)
chr5 (162-223)||(14215730-14215791)
chr5 (168-220)||(16019077-16019129)
chr5 (165-223)||(2864754-2864812)
chr5 (167-212)||(14464018-14464063)
chr5 (167-223)||(4222209-4222265)
chr5 (163-221)||(24332052-24332111)
chr5 (126-164)||(38943720-38943758)
chr5 (167-216)||(25000583-25000632)
chr5 (155-223)||(15371861-15371928)
chr5 (167-223)||(15709455-15709511)
chr5 (167-223)||(16018591-16018647)
chr5 (167-223)||(29454742-29454798)
chr5 (167-216)||(6018316-6018365)
chr5 (167-223)||(7348561-7348617)
chr5 (171-223)||(24325218-24325270)
chr5 (171-223)||(24361843-24361895)
[»] chr6 (32 HSPs)
chr6 (155-221)||(11445476-11445542)
chr6 (167-223)||(11277069-11277125)
chr6 (161-223)||(22219840-22219902)
chr6 (162-223)||(12935154-12935215)
chr6 (153-221)||(12935646-12935714)
chr6 (167-223)||(18257139-18257195)
chr6 (167-223)||(20741102-20741158)
chr6 (167-223)||(23074001-23074057)
chr6 (155-222)||(11444977-11445044)
chr6 (168-221)||(18504922-18504975)
chr6 (167-223)||(1149467-1149523)
chr6 (167-215)||(15827640-15827688)
chr6 (167-223)||(23075615-23075671)
chr6 (168-223)||(10899942-10899997)
chr6 (162-223)||(2319669-2319730)
chr6 (167-216)||(15828135-15828184)
chr6 (160-221)||(28472632-28472693)
chr6 (160-221)||(29859821-29859882)
chr6 (167-223)||(10900417-10900473)
chr6 (167-223)||(18257624-18257680)
chr6 (167-223)||(20741591-20741647)
chr6 (164-223)||(29033433-29033492)
chr6 (167-216)||(31470317-31470366)
chr6 (167-223)||(1149919-1149975)
chr6 (167-223)||(18505406-18505462)
chr6 (167-223)||(31470803-31470859)
chr6 (167-221)||(22534214-22534268)
chr6 (165-215)||(29035132-29035182)
chr6 (168-221)||(2322707-2322760)
chr6 (168-221)||(3835215-3835268)
chr6 (167-223)||(4811374-4811430)
chr6 (167-213)||(4811753-4811799)
[»] chr2 (36 HSPs)
chr2 (156-223)||(26538088-26538155)
chr2 (161-223)||(26538566-26538628)
chr2 (161-223)||(18451318-18451380)
chr2 (161-223)||(20440518-20440580)
chr2 (167-223)||(11091007-11091063)
chr2 (167-223)||(18450832-18450888)
chr2 (167-223)||(20444751-20444807)
chr2 (167-223)||(22374322-22374378)
chr2 (167-223)||(28616615-28616671)
chr2 (167-223)||(40815347-40815403)
chr2 (160-220)||(43058822-43058882)
chr2 (162-221)||(239350-239409)
chr2 (168-223)||(11090524-11090579)
chr2 (168-223)||(40027627-40027682)
chr2 (161-223)||(7446833-7446895)
chr2 (163-221)||(15551497-15551555)
chr2 (167-223)||(239839-239895)
chr2 (167-223)||(1978110-1978166)
chr2 (167-223)||(1978596-1978652)
chr2 (167-223)||(22374812-22374868)
chr2 (167-215)||(28617109-28617157)
chr2 (167-223)||(40027142-40027198)
chr2 (168-223)||(14432145-14432200)
chr2 (168-215)||(40815840-40815887)
chr2 (165-223)||(8972237-8972295)
chr2 (167-221)||(35779710-35779764)
chr2 (171-220)||(3025472-3025521)
chr2 (167-220)||(28847185-28847238)
chr2 (167-223)||(3025949-3026004)
chr2 (161-221)||(14432630-14432690)
chr2 (167-223)||(35781150-35781206)
chr2 (162-216)||(8425352-8425406)
chr2 (167-221)||(43058335-43058389)
chr2 (167-223)||(7446344-7446400)
chr2 (168-223)||(8425847-8425902)
chr2 (165-210)||(15552553-15552598)
[»] chr1 (35 HSPs)
chr1 (165-223)||(33144406-33144464)
chr1 (167-223)||(8678543-8678599)
chr1 (161-223)||(21856038-21856100)
chr1 (167-220)||(39154510-39154563)
chr1 (167-220)||(50970280-50970333)
chr1 (167-223)||(4636458-4636514)
chr1 (167-223)||(5539818-5539874)
chr1 (167-219)||(5540309-5540361)
chr1 (167-223)||(8679028-8679084)
chr1 (155-223)||(9018963-9019031)
chr1 (163-223)||(17433702-17433762)
chr1 (167-223)||(18984121-18984177)
chr1 (167-223)||(29869622-29869678)
chr1 (167-223)||(50970765-50970821)
chr1 (168-223)||(15173099-15173154)
chr1 (167-221)||(15173582-15173636)
chr1 (167-221)||(29870108-29870162)
chr1 (173-223)||(33143925-33143975)
chr1 (167-223)||(15646194-15646250)
chr1 (167-223)||(15646682-15646738)
chr1 (167-223)||(18984606-18984662)
chr1 (167-223)||(29307429-29307485)
chr1 (168-223)||(5963065-5963120)
chr1 (167-221)||(21856532-21856586)
chr1 (167-221)||(26859061-26859115)
chr1 (156-221)||(9019452-9019517)
chr1 (167-216)||(29306955-29307004)
chr1 (166-223)||(47826965-47827022)
chr1 (163-223)||(39154017-39154077)
chr1 (167-223)||(52268292-52268348)
chr1 (163-223)||(52269235-52269295)
chr1 (157-223)||(26859546-26859612)
chr1 (154-223)||(2733444-2733513)
chr1 (167-213)||(17433218-17433264)
chr1 (167-223)||(5962580-5962636)
[»] chr4 (48 HSPs)
chr4 (162-223)||(23494930-23494991)
chr4 (167-223)||(15523237-15523293)
chr4 (167-223)||(22434181-22434237)
chr4 (167-223)||(45082911-45082967)
chr4 (164-223)||(46193892-46193951)
chr4 (167-221)||(11153636-11153690)
chr4 (162-216)||(18764014-18764068)
chr4 (162-223)||(12234326-12234387)
chr4 (165-221)||(4219557-4219613)
chr4 (157-221)||(22434665-22434729)
chr4 (167-223)||(25447249-25447305)
chr4 (167-223)||(25447723-25447779)
chr4 (164-220)||(33109683-33109739)
chr4 (167-223)||(46193407-46193463)
chr4 (164-223)||(2118292-2118351)
chr4 (164-223)||(23494442-23494501)
chr4 (161-223)||(25937666-25937728)
chr4 (151-216)||(20471005-20471070)
chr4 (168-220)||(4220049-4220101)
chr4 (167-223)||(15523721-15523777)
chr4 (167-223)||(16318263-16318319)
chr4 (167-223)||(25938158-25938214)
chr4 (167-219)||(48293596-48293648)
chr4 (167-223)||(51021282-51021338)
chr4 (168-223)||(54995554-54995609)
chr4 (167-220)||(35363091-35363144)
chr4 (167-223)||(10258374-10258430)
chr4 (167-223)||(12234816-12234872)
chr4 (167-223)||(20958346-20958402)
chr4 (167-223)||(33109951-33110007)
chr4 (163-223)||(38962306-38962366)
chr4 (168-223)||(18751602-18751657)
chr4 (168-223)||(48526668-48526723)
chr4 (168-223)||(54995072-54995127)
chr4 (161-223)||(51020793-51020855)
chr4 (167-223)||(11153148-11153204)
chr4 (168-218)||(2118787-2118837)
chr4 (172-216)||(20957196-20957240)
chr4 (167-223)||(48526198-48526254)
chr4 (167-210)||(22170436-22170479)
chr4 (167-221)||(16691560-16691614)
chr4 (167-221)||(44892637-44892691)
chr4 (168-221)||(16690939-16690992)
chr4 (165-218)||(44219375-44219428)
chr4 (155-187)||(33689819-33689851)
chr4 (162-218)||(34789876-34789932)
chr4 (183-223)||(43243767-43243807)
chr4 (167-223)||(48708297-48708353)
[»] scaffold1223 (2 HSPs)
scaffold1223 (167-223)||(1228-1284)
scaffold1223 (163-223)||(751-811)
[»] scaffold0951 (2 HSPs)
scaffold0951 (151-223)||(2154-2226)
scaffold0951 (167-223)||(1669-1725)
[»] chr8 (28 HSPs)
chr8 (155-223)||(19176777-19176845)
chr8 (167-223)||(41681136-41681192)
chr8 (161-220)||(34541038-34541097)
chr8 (161-223)||(11656451-11656513)
chr8 (158-215)||(12571856-12571913)
chr8 (162-223)||(19176287-19176348)
chr8 (167-223)||(9930144-9930200)
chr8 (167-223)||(13225126-13225182)
chr8 (167-223)||(31133707-31133763)
chr8 (167-217)||(11656950-11657000)
chr8 (161-223)||(33742918-33742980)
chr8 (162-220)||(44831735-44831793)
chr8 (167-223)||(9178122-9178178)
chr8 (167-223)||(11337009-11337065)
chr8 (167-223)||(31133222-31133278)
chr8 (167-223)||(41681621-41681677)
chr8 (167-223)||(44831249-44831305)
chr8 (168-223)||(9928912-9928967)
chr8 (168-223)||(33328161-33328216)
chr8 (169-216)||(13224645-13224692)
chr8 (157-201)||(9177659-9177703)
chr8 (168-212)||(12572349-12572393)
chr8 (167-212)||(33328638-33328683)
chr8 (167-223)||(4629799-4629855)
chr8 (168-220)||(4630276-4630328)
chr8 (155-210)||(43958199-43958254)
chr8 (155-205)||(10919691-10919741)
chr8 (151-187)||(2208700-2208736)
[»] chr7 (28 HSPs)
chr7 (168-220)||(4641443-4641495)
chr7 (167-223)||(19590527-19590583)
chr7 (161-223)||(19591012-19591074)
chr7 (161-223)||(38859128-38859190)
chr7 (167-223)||(2658841-2658897)
chr7 (167-223)||(35289388-35289444)
chr7 (167-223)||(37786769-37786825)
chr7 (168-223)||(19830423-19830478)
chr7 (161-220)||(37787257-37787316)
chr7 (167-216)||(34533793-34533842)
chr7 (167-220)||(38858645-38858698)
chr7 (167-219)||(19830910-19830962)
chr7 (167-223)||(32004616-32004672)
chr7 (167-223)||(32005101-32005157)
chr7 (167-223)||(35288905-35288961)
chr7 (168-223)||(4478187-4478242)
chr7 (155-223)||(38160941-38161009)
chr7 (168-223)||(29100338-29100393)
chr7 (167-222)||(34534279-34534334)
chr7 (178-223)||(29099863-29099908)
chr7 (155-223)||(2659327-2659395)
chr7 (167-223)||(28583441-28583497)
chr7 (168-206)||(4641945-4641983)
chr7 (162-223)||(23952727-23952789)
chr7 (171-223)||(23953216-23953268)
chr7 (164-210)||(34594582-34594628)
chr7 (167-216)||(28584416-28584465)
chr7 (155-187)||(48247577-48247609)
[»] chr3 (49 HSPs)
chr3 (167-223)||(31779139-31779195)
chr3 (167-223)||(32535450-32535506)
chr3 (167-223)||(39556064-39556120)
chr3 (162-221)||(20840557-20840616)
chr3 (167-221)||(39555580-39555634)
chr3 (161-223)||(43973927-43973989)
chr3 (161-221)||(24301045-24301105)
chr3 (160-223)||(29801903-29801966)
chr3 (167-221)||(20841050-20841104)
chr3 (161-223)||(26837842-26837904)
chr3 (161-223)||(30104478-30104540)
chr3 (167-216)||(4275858-4275907)
chr3 (162-223)||(5137468-5137529)
chr3 (168-221)||(32534962-32535015)
chr3 (167-220)||(37727420-37727473)
chr3 (167-223)||(25853236-25853292)
chr3 (167-223)||(29801358-29801414)
chr3 (167-223)||(30098250-30098306)
chr3 (167-223)||(31778655-31778711)
chr3 (168-223)||(25612464-25612519)
chr3 (162-221)||(48452986-48453045)
chr3 (167-221)||(23644464-23644518)
chr3 (167-221)||(27393663-27393717)
chr3 (167-221)||(27394066-27394120)
chr3 (162-223)||(17464488-17464549)
chr3 (167-223)||(23644952-23645008)
chr3 (167-223)||(50116896-50116952)
chr3 (167-223)||(51473430-51473486)
chr3 (168-223)||(5136983-5137038)
chr3 (168-223)||(41046703-41046758)
chr3 (169-223)||(22425300-22425354)
chr3 (167-221)||(37222060-37222114)
chr3 (167-209)||(45965940-45965982)
chr3 (161-223)||(51474821-51474883)
chr3 (163-216)||(25853721-25853774)
chr3 (167-223)||(23228494-23228550)
chr3 (167-223)||(37726931-37726987)
chr3 (168-219)||(24300560-24300610)
chr3 (168-223)||(26837363-26837418)
chr3 (167-210)||(43973443-43973486)
chr3 (167-216)||(17464986-17465035)
chr3 (155-210)||(25420641-25420696)
chr3 (168-223)||(26274570-26274625)
chr3 (167-206)||(37220559-37220598)
chr3 (161-215)||(22424810-22424864)
chr3 (156-189)||(50901049-50901082)
chr3 (157-218)||(52375824-52375885)
chr3 (170-218)||(23227267-23227315)
chr3 (171-223)||(25419150-25419202)
[»] scaffold0295 (2 HSPs)
scaffold0295 (162-223)||(4790-4851)
scaffold0295 (165-216)||(5285-5336)
[»] scaffold0417 (2 HSPs)
scaffold0417 (167-223)||(11110-11166)
scaffold0417 (184-223)||(10640-10679)
[»] scaffold0273 (1 HSPs)
scaffold0273 (167-223)||(4694-4750)
[»] scaffold0176 (2 HSPs)
scaffold0176 (167-223)||(19108-19164)
scaffold0176 (171-223)||(18841-18893)
[»] scaffold0019 (1 HSPs)
scaffold0019 (155-223)||(134160-134228)
[»] scaffold0007 (2 HSPs)
scaffold0007 (168-223)||(64792-64847)
scaffold0007 (167-219)||(64304-64356)
[»] scaffold0432 (2 HSPs)
scaffold0432 (168-215)||(10367-10414)
scaffold0432 (168-223)||(9935-9990)
[»] scaffold0113 (1 HSPs)
scaffold0113 (169-223)||(28730-28784)
[»] scaffold1585 (1 HSPs)
scaffold1585 (167-223)||(569-625)
[»] scaffold0057 (2 HSPs)
scaffold0057 (168-223)||(61945-62000)
scaffold0057 (167-221)||(61030-61084)
[»] scaffold0027 (2 HSPs)
scaffold0027 (160-223)||(42645-42708)
scaffold0027 (168-221)||(42172-42225)
[»] scaffold0076 (1 HSPs)
scaffold0076 (168-223)||(8496-8551)


Alignment Details
Target: chr5 (Bit Score: 94; Significance: 5e-46; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 30 - 134
Target Start/End: Original strand, 38942984 - 38943086
Alignment:
Q  30 atgccctaactctaaaaatcagacattaaacattcatatatttcattttaataagcaaaactttcattgaaagtgagcaaactagcacaactatatgtgc 129  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38942984 atgccctaactctaaa--tcagacattaaacattcatatatttcattttaataagcaaaactttcattgaaagtgagcaaactagcacaactatatgtgc 38943081  T
Q  130 aaagt 134  Q
    |||||    
T  38943082 aaagt 38943086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 18183518 - 18183456
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18183518 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 18183456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 2865298 - 2865242
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2865298 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 2865242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 5819472 - 5819416
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5819472 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 5819416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 19359679 - 19359623
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19359679 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 19359623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 5818932 - 5818987
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5818932 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 5818987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 15372415 - 15372360
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15372415 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 15372360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 8647440 - 8647494
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8647440 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 8647494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 8647987 - 8647925
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  8647987 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgccct 8647925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 14215242 - 14215291
Alignment:
Q  166 acttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14215242 acttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 14215291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 164193 - 164249
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  164193 cttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgccct 164249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 19359138 - 19359194
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  19359138 cttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgccct 19359194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 24362379 - 24362323
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  24362379 cttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgccct 24362323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 15708963 - 15709021
Alignment:
Q  157 aaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 215  Q
    ||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  15708963 aaaatttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggt 15709021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 24331555 - 24331617
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  24331555 tttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgccct 24331617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 8461474 - 8461421
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  8461474 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgc 8461421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 29455294 - 29455229
Alignment:
Q  158 aaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| || ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  29455294 aaattaaggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgccct 29455229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 18182973 - 18183028
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||    
T  18182973 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgccct 18183028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 4623150 - 4623204
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  4623150 cttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcc 4623204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 7349560 - 7349507
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    |||||||||||||||||||||||||||||||  ||||||||||| |||||||||    
T  7349560 cttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgc 7349507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 8460923 - 8460988
Alignment:
Q  158 aaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| ||| ||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  8460923 aaatataggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgccct 8460988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 14215791 - 14215730
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| |||||||||| ||||||||||||||||||| | |||||||||||||| |||||||||    
T  14215791 ttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgccct 14215730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 16019129 - 16019077
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||    
T  16019129 ttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgc 16019077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 2864754 - 2864812
Alignment:
Q  165 gacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| || || ||||||    
T  2864754 gacttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgccct 2864812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 14464063 - 14464018
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaact 212  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||    
T  14464063 cttaattacacttttagtcctcgtgttttggcctactcacgaaact 14464018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 4222265 - 4222209
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||| ||||||    
T  4222265 cttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgccct 4222209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 24332111 - 24332052
Alignment:
Q  163 tagacttaattacactttt-ggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    ||||||||||||||||||| |||| || ||||||||| |||||||||||||| |||||||    
T  24332111 tagacttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgcc 24332052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 38943720 - 38943758
Alignment:
Q  126 gtgcaaagtagctaaaaaccaacatatatataaaattta 164  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  38943720 gtgcaaagtagctaaaaaccaacatatatatacaattta 38943758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 25000632 - 25000583
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    ||||||||||||||||||| || ||||||||| ||||||||||| |||||    
T  25000632 cttaattacacttttggtcttcatgttttggcctactcacgaaattggtc 25000583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 15371861 - 15371928
Alignment:
Q  155 ataaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||| || |||||||||||||||||| ||||||| ||||||  |||||||| || ||||||||||||    
T  15371861 ataaaaatttgacttaattacacttttgatcctcgtattttggtctactcacg-aattggtcctgccct 15371928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 15709511 - 15709455
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||| | |||||||||| |||||| |||||| ||| ||||||    
T  15709511 cttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgccct 15709455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 16018591 - 16018647
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||| |||||||||||| || |||||||| || || ||||||    
T  16018591 cttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgccct 16018647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 29454742 - 29454798
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||| ||||||||||| | |||||||||| ||||||||||| ||||| ||||||    
T  29454742 cttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgccct 29454798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 6018316 - 6018365
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    |||||||||| ||||||| |||||||||||   |||||||||||||||||    
T  6018316 cttaattacatttttggttctcgtgttttgttctactcacgaaactggtc 6018365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 7348561 - 7348617
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||| ||||||||||| |||||| |  ||||||||||| ||||| ||||||    
T  7348561 cttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgccct 7348617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 24325218 - 24325270
Alignment:
Q  171 attacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| || ||||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgccct 24325270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 24361843 - 24361895
Alignment:
Q  171 attacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| || ||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgccct 24361895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 11445542 - 11445476
Alignment:
Q  155 ataaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11445542 ataaaatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 11445476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 11277125 - 11277069
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11277125 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 11277069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 22219902 - 22219840
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22219902 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 22219840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 12935154 - 12935215
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 12935215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 12935714 - 12935646
Alignment:
Q  153 atataaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||| || ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12935714 atataacatataggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcc 12935646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 18257139 - 18257195
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18257139 cttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgccct 18257195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 20741102 - 20741158
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20741102 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 20741158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 23074001 - 23074057
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23074001 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 23074057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 11444977 - 11445044
Alignment:
Q  155 ataaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccc 222  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  11444977 ataaattttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgccc 11445044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 18504922 - 18504975
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 18504975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 1149467 - 1149523
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  1149467 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgccct 1149523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 15827640 - 15827688
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15827640 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 15827688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 23075671 - 23075615
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  23075671 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgccct 23075615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 10899942 - 10899997
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccct 10899997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 2319669 - 2319730
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| |||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  2319669 ttaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgccct 2319730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 15828184 - 15828135
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15828184 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 15828135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 28472632 - 28472693
Alignment:
Q  160 atttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  28472632 atttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgcc 28472693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 29859821 - 29859882
Alignment:
Q  160 atttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  29859821 atttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgcc 29859882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 10900473 - 10900417
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  10900473 cttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgccct 10900417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 18257680 - 18257624
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  18257680 cttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgccct 18257624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 20741647 - 20741591
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  20741647 cttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgccct 20741591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 29033433 - 29033492
Alignment:
Q  164 agacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||    
T  29033433 agacttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgccct 29033492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 31470317 - 31470366
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  31470317 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtc 31470366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 1149975 - 1149919
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||| || |||||| |||||||||| ||||||    
T  1149975 cttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgccct 1149919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 18505462 - 18505406
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||    
T  18505462 cttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgccct 18505406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 31470859 - 31470803
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||| ||||||| || |||||||||||||||| |||||||    
T  31470859 cttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgccct 31470803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 22534268 - 22534214
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||||||||||| ||||| |  |||||||||| ||||||||||    
T  22534268 cttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 29035182 - 29035132
Alignment:
Q  165 gacttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 215  Q
    ||||||||||||||||| ||||||||||||| || ||||||||||| ||||    
T  29035182 gacttaattacacttttcgtcctcgtgttttagcctactcacgaaattggt 29035132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 2322760 - 2322707
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||||| |||||||||||  ||||||||||||| ||| ||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcc 2322707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 3835268 - 3835215
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||||||  |||||||| | ||||||||||| ||||||||||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcc 3835215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 4811374 - 4811430
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||  || ||||||  ||||||||||||||||| ||||||    
T  4811374 cttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgccct 4811430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 4811799 - 4811753
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactg 213  Q
    |||||||| ||||||| ||||||||||||||| |||||| |||||||    
T  4811799 cttaattatacttttgatcctcgtgttttggcctactcatgaaactg 4811753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 2e-23; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 26538088 - 26538155
Alignment:
Q  156 taaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26538088 taaaattaaggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgccct 26538155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 26538628 - 26538566
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26538628 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 26538566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 18451380 - 18451318
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  18451380 tttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgccct 18451318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 20440580 - 20440518
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  20440580 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgccct 20440518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 11091063 - 11091007
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  11091063 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgccct 11091007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 18450832 - 18450888
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  18450832 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagccct 18450888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 20444751 - 20444807
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  20444751 cttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgccct 20444807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 22374322 - 22374378
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  22374322 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgccct 22374378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 28616615 - 28616671
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  28616615 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgccct 28616671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 40815347 - 40815403
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgccct 40815403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 43058882 - 43058822
Alignment:
Q  160 atttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    |||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  43058882 atttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgc 43058822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 239350 - 239409
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  239350 ttaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc 239409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 11090524 - 11090579
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  11090524 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgccct 11090579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 40027682 - 40027627
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccct 40027627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 7446895 - 7446833
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  7446895 tttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgccct 7446833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 15551497 - 15551555
Alignment:
Q  163 tagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||    
T  15551497 tagacttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcc 15551555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 239895 - 239839
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  239895 cttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccct 239839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 1978110 - 1978166
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||    
T  1978110 cttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgccct 1978166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 1978652 - 1978596
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  1978652 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgccct 1978596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 22374868 - 22374812
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  22374868 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgccct 22374812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 28617157 - 28617109
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 215  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28617157 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggt 28617109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 40027142 - 40027198
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||    
T  40027142 cttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgccct 40027198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 14432145 - 14432200
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgccct 14432200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 40815887 - 40815840
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 215  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40815887 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggt 40815840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 8972237 - 8972295
Alignment:
Q  165 gacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||||||    
T  8972237 gacttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccct 8972295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 35779710 - 35779764
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||    
T  35779710 cttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgcc 35779764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 3025472 - 3025521
Alignment:
Q  171 attacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  3025472 attacatttttggtcctcgtgttttggcctactcacgaaactggtcctgc 3025521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 28847238 - 28847185
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    |||||||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  28847238 cttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgc 28847185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 3026004 - 3025949
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||    
T  3026004 cttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgccct 3025949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 14432690 - 14432630
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    ||||| |||||||||| ||||||||||||||||||||| |||||| |||||||||| ||||    
T  14432690 tttagccttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgcc 14432630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 35781206 - 35781150
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| ||||| ||||||    
T  35781206 cttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgccct 35781150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 8425352 - 8425406
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  8425352 ttagatttaattacacttttggtccttgtgttttggcctactcacgaaattggtc 8425406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 43058335 - 43058389
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||| |||||||||||||||  |||||| ||||||||||||||    
T  43058335 cttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcc 43058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 7446344 - 7446400
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||| ||||||||||||||  |||||| |||| ||||||||||||    
T  7446344 cttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgccct 7446400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 8425902 - 8425847
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||| || |||||||||  ||||||||||| ||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgccct 8425847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 15552598 - 15552553
Alignment:
Q  165 gacttaattacacttttggtcctcgtgttttggcttactcacgaaa 210  Q
    ||||||||||||||||||||| |  ||||||||| |||||||||||    
T  15552598 gacttaattacacttttggtcataatgttttggcctactcacgaaa 15552553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 9e-23; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 33144464 - 33144406
Alignment:
Q  165 gacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33144464 gacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 33144406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 8678543 - 8678599
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8678543 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 8678599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 21856038 - 21856100
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  21856038 tttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgccct 21856100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 39154563 - 39154510
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39154563 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 39154510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 50970280 - 50970333
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50970280 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 50970333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 4636514 - 4636458
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  4636514 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgccct 4636458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 5539818 - 5539874
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  5539818 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccct 5539874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 5540361 - 5540309
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctg 219  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5540361 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctg 5540309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 8679084 - 8679028
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  8679084 cttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgccct 8679028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 9018963 - 9019031
Alignment:
Q  155 ataaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||    
T  9018963 ataaactttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgccct 9019031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 17433762 - 17433702
Alignment:
Q  163 tagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||    
T  17433762 tagacttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgccct 17433702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 18984121 - 18984177
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  18984121 cttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgccct 18984177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 29869622 - 29869678
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  29869622 cttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgccct 29869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 50970821 - 50970765
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  50970821 cttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgccct 50970765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 15173099 - 15173154
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgccct 15173154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 15173636 - 15173582
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  15173636 cttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc 15173582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 29870162 - 29870108
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  29870162 cttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcc 29870108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 33143925 - 33143975
Alignment:
Q  173 tacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 33143975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 15646194 - 15646250
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  15646194 cttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgccct 15646250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 15646738 - 15646682
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||    
T  15646738 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctaccct 15646682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 18984662 - 18984606
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  18984662 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgccct 18984606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 29307485 - 29307429
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  29307485 cttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgccct 29307429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 5963120 - 5963065
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| || ||||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccct 5963065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 21856586 - 21856532
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||| |||||||    
T  21856586 cttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcc 21856532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 26859061 - 26859115
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  26859061 cttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgcc 26859115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 9019517 - 9019452
Alignment:
Q  156 taaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||| ||||| |||||||||||||||||||||||||||||| | ||||||| |||||||| |||||    
T  9019517 taaagtttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgcc 9019452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 29306955 - 29307004
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  29306955 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtc 29307004  T

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Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 47826965 - 47827022
Alignment:
Q  166 acttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  47826965 acttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgccct 47827022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 39154017 - 39154077
Alignment:
Q  163 tagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||| || ||||||||| |||||||||||||| || ||||||    
T  39154017 tagacttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgccct 39154077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 52268292 - 52268348
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||    
T  52268292 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgccct 52268348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 52269295 - 52269235
Alignment:
Q  163 tagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||  ||| |||||||    
T  52269295 tagacttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgccct 52269235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 26859612 - 26859546
Alignment:
Q  157 aaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| ||| |||||||||||||||| ||||||||||||||  |||||||||||||  |||||||||    
T  26859612 aaaatataggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgccct 26859546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 2733513 - 2733444
Alignment:
Q  154 tataaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||| ||||| |||||||| |||||||||||| |||||||||| || || ||||| ||||||||||||    
T  2733513 tataaattttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgccct 2733444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 17433218 - 17433264
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactg 213  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||||    
T  17433218 cttaattacacttttggtcctcatgttttggcctactcatgaaactg 17433264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 5962580 - 5962636
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||| |||||||||||||||| |||  || ||||||||||||||| |||||    
T  5962580 cttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggccct 5962636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 23494991 - 23494930
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 23494930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 15523237 - 15523293
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15523237 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 15523293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 22434181 - 22434237
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22434181 cttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgccct 22434237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 45082967 - 45082911
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  45082967 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgccct 45082911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 46193951 - 46193892
Alignment:
Q  164 agacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  46193951 agacttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccct 46193892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 11153690 - 11153636
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11153690 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 11153636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 18764068 - 18764014
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 18764014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 12234326 - 12234387
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  12234326 ttaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgccct 12234387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 4219557 - 4219613
Alignment:
Q  165 gacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  4219557 gacttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 4219613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 22434729 - 22434665
Alignment:
Q  157 aaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  22434729 aaaatttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 22434665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 25447249 - 25447305
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  25447249 cttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccct 25447305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 25447779 - 25447723
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  25447779 cttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgccct 25447723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 33109683 - 33109739
Alignment:
Q  164 agacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  33109683 agacttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgc 33109739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 46193407 - 46193463
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  46193407 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccct 46193463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 2118292 - 2118351
Alignment:
Q  164 agacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  2118292 agacttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgccct 2118351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 23494442 - 23494501
Alignment:
Q  164 agacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  23494442 agacttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgccct 23494501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 25937666 - 25937728
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  25937666 tttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgccct 25937728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 20471070 - 20471005
Alignment:
Q  151 atatataaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    ||||||| || |||| |||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  20471070 atatatataacttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtc 20471005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 4220101 - 4220049
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  4220101 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgc 4220049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 15523777 - 15523721
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  15523777 cttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgccct 15523721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 16318319 - 16318263
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  16318319 cttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgccct 16318263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 25938214 - 25938158
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  25938214 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgccct 25938158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 48293596 - 48293648
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  48293596 cttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctg 48293648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 51021338 - 51021282
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  51021338 cttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgccct 51021282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 54995609 - 54995554
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| || ||||||    
T  54995609 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccct 54995554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 35363144 - 35363091
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||| ||||    
T  35363144 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgc 35363091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 10258430 - 10258374
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||| |||| |||||| |||| ||||||||||||    
T  10258430 cttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgccct 10258374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 12234872 - 12234816
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| || ||||||    
T  12234872 cttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgccct 12234816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 20958402 - 20958346
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||    
T  20958402 cttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgccct 20958346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 33110007 - 33109951
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||| ||||||||| | ||||||||| ||||||||||||    
T  33110007 cttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgccct 33109951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 38962366 - 38962306
Alignment:
Q  163 tagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||| ||||||||||||||||||||  || ||||||||||||||| |||||    
T  38962366 tagacttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggccct 38962306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 18751602 - 18751657
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||| ||||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgccct 18751657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 48526723 - 48526668
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgccct 48526668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 54995072 - 54995127
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||    
T  54995072 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctaccct 54995127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 51020793 - 51020855
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||||||||| ||||| |||||||||| | |||| ||||||||||||||||    
T  51020793 tttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgccct 51020855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 11153148 - 11153204
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||| ||||| ||||||    
T  11153148 cttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgccct 11153204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 2118837 - 2118787
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcct 218  Q
    |||||||||||||||||| |||||||||||| | |||| ||||||||||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcct 2118787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 20957196 - 20957240
Alignment:
Q  172 ttacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtc 20957240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 48526198 - 48526254
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||| ||||||||||| | |||||| ||||||||  |||||||    
T  48526198 cttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgccct 48526254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 22170479 - 22170436
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaa 210  Q
    |||||||||||||||||||||||||||||| | |||| ||||||    
T  22170479 cttaattacacttttggtcctcgtgttttgacctactgacgaaa 22170436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 16691614 - 16691560
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||| |||  |||||||| | ||||||||||| ||||||||||    
T  16691614 cttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcc 16691560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 44892691 - 44892637
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||| | ||||||||||||||||||| | ||||||||||| |||| |||||    
T  44892691 cttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgcc 44892637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 16690939 - 16690992
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    ||||||||| |||||||||| ||||||||   ||||||||||| ||||||||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcc 16690992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 44219375 - 44219428
Alignment:
Q  165 gacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcct 218  Q
    |||||||||||||||||||||||||| ||||  |  |||||||||| |||||||    
T  44219375 gacttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcct 44219428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 33689819 - 33689851
Alignment:
Q  155 ataaaatttagacttaattacacttttggtcct 187  Q
    ||||||||||| |||||||||||||||||||||    
T  33689819 ataaaatttaggcttaattacacttttggtcct 33689851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 34789932 - 34789876
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcct 218  Q
    |||||||||||||||||||||||||| |  ||||| |  |||||||||| |||||||    
T  34789932 ttagacttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 34789876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 43243807 - 43243767
Alignment:
Q  183 gtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||| ||||||||||| ||||| ||||||    
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgccct 43243767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 48708297 - 48708353
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||  |||||||||| ||  ||||||| || |||||||||    
T  48708297 cttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgccct 48708353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 1284 - 1228
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1284 cttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgccct 1228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 751 - 811
Alignment:
Q  163 tagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  751 tagacttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgccct 811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 2226 - 2154
Alignment:
Q  151 atatataaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||| || |||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  2226 atatatataacttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgccct 2154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 1669 - 1725
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  1669 cttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgccct 1725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 19176845 - 19176777
Alignment:
Q  155 ataaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| |||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  19176845 ataatatttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgccct 19176777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 41681136 - 41681192
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41681136 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 41681192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 34541097 - 34541038
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34541097 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 34541038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 11656451 - 11656513
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  11656451 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgccct 11656513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 12571856 - 12571913
Alignment:
Q  158 aaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 215  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12571856 aaatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggt 12571913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 19176287 - 19176348
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  19176287 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgccct 19176348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 9930200 - 9930144
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  9930200 cttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgccct 9930144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 13225182 - 13225126
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  13225182 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgccct 13225126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 31133763 - 31133707
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  31133763 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgccct 31133707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 11657000 - 11656950
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcc 217  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11657000 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcc 11656950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 33742918 - 33742980
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||    
T  33742918 tttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgccct 33742980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 44831793 - 44831735
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    |||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  44831793 ttaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgc 44831735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 9178178 - 9178122
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| || ||||||    
T  9178178 cttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccct 9178122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 11337065 - 11337009
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||    
T  11337065 cttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgccct 11337009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 31133222 - 31133278
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  31133222 cttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgccct 31133278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 41681677 - 41681621
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  41681677 cttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctaccct 41681621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 44831249 - 44831305
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  44831249 cttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgccct 44831305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 9928912 - 9928967
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgccct 9928967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 33328161 - 33328216
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| || ||||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccct 33328216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 13224645 - 13224692
Alignment:
Q  169 taattacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc 13224692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 9177659 - 9177703
Alignment:
Q  157 aaaatttagacttaattacacttttggtcctcgtgttttggctta 201  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||    
T  9177659 aaaatataggcttaattacacttttggtcctcgtgttttggctta 9177703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 12572393 - 12572349
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaact 212  Q
    ||||||||||||||||||||||||||||||  |||||||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaact 12572349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 33328683 - 33328638
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaact 212  Q
    |||||||| |||||||||||||||||||| || |||||||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaact 33328638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 4629799 - 4629855
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||| |||||||  | ||||||||||||| || |||||||||||||||||||||    
T  4629799 cttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgccct 4629855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 4630328 - 4630276
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    ||||||||||||||| || |||||||||||  ||||||||||| |||||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgc 4630276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 43958199 - 43958254
Alignment:
Q  155 ataaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaa 210  Q
    |||| ||||||||||||||| |||||||||| ||||||||||   |||||||||||    
T  43958199 ataatatttagacttaattatacttttggtcttcgtgttttgatctactcacgaaa 43958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 10919741 - 10919691
Alignment:
Q  155 ataaaatttagacttaattacacttttggtcctcgtgttttggcttactca 205  Q
    |||||||| || |||||||| ||||||||||||||||||||| | ||||||    
T  10919741 ataaaattaaggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 2208700 - 2208736
Alignment:
Q  151 atatataaaatttagacttaattacacttttggtcct 187  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  2208700 atatataacatttagacttaattacacttttgatcct 2208736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 1e-21; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 4641443 - 4641495
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 4641495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 19590527 - 19590583
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19590527 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 19590583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 19591074 - 19591012
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  19591074 tttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgccct 19591012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 38859190 - 38859128
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  38859190 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccct 38859128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 2658841 - 2658897
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  2658841 cttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgccct 2658897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 35289444 - 35289388
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  35289444 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgccct 35289388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 37786769 - 37786825
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  37786769 cttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgccct 37786825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 19830423 - 19830478
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  19830423 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgccct 19830478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 37787316 - 37787257
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  37787316 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 37787257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 34533793 - 34533842
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34533793 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 34533842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 38858645 - 38858698
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  38858645 cttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgc 38858698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 19830962 - 19830910
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctg 219  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  19830962 cttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctg 19830910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 32004616 - 32004672
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||| || |||||||||    
T  32004616 cttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgccct 32004672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 32005157 - 32005101
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  32005157 cttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgccct 32005101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 35288905 - 35288961
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  35288905 cttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgccct 35288961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 4478242 - 4478187
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  4478242 ttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgccct 4478187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 38160941 - 38161009
Alignment:
Q  155 ataaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| |||||| ||||||||||||||||||||||| |||||||| ||||||||||| |  |||||||||    
T  38160941 ataatatttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgccct 38161009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 29100393 - 29100338
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||  ||||||| ||| ||||||||||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgccct 29100338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 34534334 - 34534279
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccc 222  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  34534334 cttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgccc 34534279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 29099863 - 29099908
Alignment:
Q  178 ttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgccct 29099908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 2659395 - 2659327
Alignment:
Q  155 ataaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||| |||| |||||||||| |||||||||||| |||||||| || ||| |||||||||| ||||||    
T  2659395 ataaaaattaggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgccct 2659327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 28583441 - 28583497
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| |||||| || | |||| |||||||    
T  28583441 cttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgccct 28583497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 4641983 - 4641945
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcac 206  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac 4641945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 23952727 - 23952789
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttg-gcttactcacgaaactggtcctgccct 223  Q
    |||| ||||||||||||||||||||||||||||||  | ||||||||||| ||||| ||||||    
T  23952727 ttaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgccct 23952789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 23953268 - 23953216
Alignment:
Q  171 attacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||| |||||||||||||||||||   |||||||||||||||||| |||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccct 23953216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 34594582 - 34594628
Alignment:
Q  164 agacttaattacacttttggtcctcgtgttttggcttactcacgaaa 210  Q
    ||||||||||||||||||||||||||  ||||| || ||||||||||    
T  34594582 agacttaattacacttttggtcctcgcattttgactaactcacgaaa 34594628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 28584465 - 28584416
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    ||||||||||||||| ||||||||| |||||| || |||||||| |||||    
T  28584465 cttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtc 28584416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 48247577 - 48247609
Alignment:
Q  155 ataaaatttagacttaattacacttttggtcct 187  Q
    ||||||||||| |||||||||||||||||||||    
T  48247577 ataaaatttaggcttaattacacttttggtcct 48247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 31779195 - 31779139
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31779195 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 31779139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 32535506 - 32535450
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32535506 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 32535450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 39556120 - 39556064
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39556120 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 39556064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 20840557 - 20840616
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20840557 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 20840616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 39555580 - 39555634
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39555580 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 39555634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 43973989 - 43973927
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  43973989 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgccct 43973927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 24301105 - 24301045
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  24301105 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcc 24301045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 29801966 - 29801903
Alignment:
Q  160 atttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  29801966 atttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgccct 29801903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 20841104 - 20841050
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  20841104 cttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcc 20841050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 26837904 - 26837842
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||    
T  26837904 tttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgccct 26837842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 30104478 - 30104540
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||    
T  30104478 tttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgccct 30104540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 4275907 - 4275858
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4275907 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 4275858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 5137529 - 5137468
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  5137529 ttaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgccct 5137468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 32534962 - 32535015
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcc 32535015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 37727473 - 37727420
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgc 220  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  37727473 cttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgc 37727420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 25853236 - 25853292
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  25853236 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgccct 25853292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 29801358 - 29801414
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||    
T  29801358 cttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgccct 29801414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 30098306 - 30098250
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||    
T  30098306 cttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgccct 30098250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 31778655 - 31778711
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||  |||||| |||||||||||||||||    
T  31778655 cttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgccct 31778711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 25612519 - 25612464
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgccct 25612464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 48452986 - 48453045
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||| ||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  48452986 ttaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc 48453045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 23644464 - 23644518
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  23644464 cttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgcc 23644518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 27393663 - 27393717
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  27393663 cttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgcc 27393717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 27394120 - 27394066
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||||||||||||||||||| |||||||||||  |||||||||    
T  27394120 cttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcc 27394066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 17464488 - 17464549
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| |||||||||||||||||||||||||||||||| || || ||||||||||| ||||||    
T  17464488 ttaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgccct 17464549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 23645008 - 23644952
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  23645008 cttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctaccct 23644952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 50116952 - 50116896
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| ||||| ||||||    
T  50116952 cttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgccct 50116896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 51473430 - 51473486
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||  || |||||||| ||||||||||||    
T  51473430 cttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgccct 51473486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 5136983 - 5137038
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||| ||||||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgccct 5137038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 41046703 - 41046758
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||| || | |||||||||||| ||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgccct 41046758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 22425354 - 22425300
Alignment:
Q  169 taattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||| ||| |||||||||| |||||| ||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgccct 22425300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 37222114 - 37222060
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||||||||||||||||||| | ||||||| ||| ||||||||||    
T  37222114 cttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgcc 37222060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 45965940 - 45965982
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaa 209  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  45965940 cttaattacacttttggtcctcgtgttttggcatactcacgaa 45965982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 51474883 - 51474821
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||| |||||||||||||||||| | ||||||||||| ||||||||||| ||||| ||||||    
T  51474883 tttaggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgccct 51474821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 25853774 - 25853721
Alignment:
Q  163 tagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    |||||||||||||||||||| |||||||||||||   |||||||||||||||||    
T  25853774 tagacttaattacacttttgatcctcgtgttttgctctactcacgaaactggtc 25853721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 23228550 - 23228494
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| || || ||||||    
T  23228550 cttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgccct 23228494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 37726931 - 37726987
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||  | || ||||||||||| |||||||    
T  37726931 cttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgccct 37726987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 24300560 - 24300610
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctg 219  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  24300560 ttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctg 24300610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 26837363 - 26837418
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||| |||||||||| || ||||||| ||||||||||| ||||||||||||    
T  26837363 ttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgccct 26837418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 43973443 - 43973486
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaa 210  Q
    |||||||||||||||||||||||||||||| | |||||||||||    
T  43973443 cttaattacacttttggtcctcgtgttttgtcctactcacgaaa 43973486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 17465035 - 17464986
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    |||||||||| ||||||||||||||||||||| ||| || ||||||||||    
T  17465035 cttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtc 17464986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 25420696 - 25420641
Alignment:
Q  155 ataaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaa 210  Q
    ||||||| |||||||||||||||||||| || |||| ||||| | |||||||||||    
T  25420696 ataaaatctagacttaattacacttttgatcatcgtattttgacctactcacgaaa 25420641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 26274570 - 26274625
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||| ||||| |||| || ||||||  ||||||||||||||||||||||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgccct 26274625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 37220559 - 37220598
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcac 206  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  37220559 cttaattacacttttggtcctcgtattttggcctactcac 37220598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 22424810 - 22424864
Alignment:
Q  161 tttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 215  Q
    ||||| |||||||||||||||||| |||||||||  || |||| |||||||||||    
T  22424810 tttaggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggt 22424864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 50901082 - 50901049
Alignment:
Q  156 taaaatttagacttaattacacttttggtcctcg 189  Q
    |||||||||| |||||||||||||||||||||||    
T  50901082 taaaatttaggcttaattacacttttggtcctcg 50901049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 52375885 - 52375824
Alignment:
Q  157 aaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcct 218  Q
    |||| |||| |||||||||||||||||||||||  ||||| |  |||||||||| |||||||    
T  52375885 aaaaattaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 52375824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 23227267 - 23227315
Alignment:
Q  170 aattacacttttggtcctcgtgttttggcttactcacgaaactggtcct 218  Q
    ||||| ||||||||||   |||||||||||||||||||||| |||||||    
T  23227267 aattagacttttggtctctgtgttttggcttactcacgaaaatggtcct 23227315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 25419150 - 25419202
Alignment:
Q  171 attacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| |||||||||| ||||||||| |||||||||||||| | || |||||||    
T  25419150 attatacttttggtcttcgtgttttagcttactcacgaaattagttctgccct 25419202  T

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Target: scaffold0295 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 4790 - 4851
Alignment:
Q  162 ttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  4790 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgccct 4851  T

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Target: scaffold0295; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 5336 - 5285
Alignment:
Q  165 gacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtc 216  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  5336 gacttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtc 5285  T

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Target: scaffold0417 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 11166 - 11110
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  11166 cttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgccct 11110  T

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Target: scaffold0417; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 10640 - 10679
Alignment:
Q  184 tcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgccct 10679  T

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Target: scaffold0273 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 4750 - 4694
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  4750 cttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgccct 4694  T

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Target: scaffold0176 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 19164 - 19108
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  19164 cttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgccct 19108  T

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Target: scaffold0176; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 18841 - 18893
Alignment:
Q  171 attacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||| ||||||    
T  18841 attacacttttggtccttctgttttggcctactcacgaaactggtcttgccct 18893  T

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Target: scaffold0019 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 134228 - 134160
Alignment:
Q  155 ataaaatttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  134228 ataatatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgccct 134160  T

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Target: scaffold0007 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 64847 - 64792
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgccct 64792  T

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Target: scaffold0007; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 64304 - 64356
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctg 219  Q
    |||||||||||||||||||||||||||||| | |||||||||||||| |||||    
T  64304 cttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctg 64356  T

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Target: scaffold0432 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 10414 - 10367
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 215  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggt 10367  T

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Target: scaffold0432; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 9935 - 9990
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||| |||||||||||||||||| || || ||||||||||| || ||||||    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgccct 9990  T

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Target: scaffold0113 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 28784 - 28730
Alignment:
Q  169 taattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||    
T  28784 taattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgccct 28730  T

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Target: scaffold1585 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 569 - 625
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| || || ||||||    
T  569 cttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgccct 625  T

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Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 62000 - 61945
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    ||||||||||||||| ||||||||||||||  ||||||||||| ||||||| ||||    
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctaccct 61945  T

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Target: scaffold0057; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 61030 - 61084
Alignment:
Q  167 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||| || |||||||    
T  61030 cttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgcc 61084  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 42708 - 42645
Alignment:
Q  160 atttagacttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||| |||||||| |||||||| |||||||||||||  |||||| ||||||| | |||||||    
T  42708 atttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgccct 42645  T

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Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 42172 - 42225
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcc 221  Q
    |||||||||||||| || ||||||||||||  || ||||||||||| |||||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgcc 42225  T

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Target: scaffold0076 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 8551 - 8496
Alignment:
Q  168 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgccct 223  Q
    |||||||||||||||||| || ||||||||  |||| |||||||||||||| ||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctaccct 8496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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