View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1375_low_7 (Length: 458)
Name: NF1375_low_7
Description: NF1375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1375_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 352; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 65 - 449
Target Start/End: Complemental strand, 46787561 - 46787177
Alignment:
| Q |
65 |
acaaattgcatccggaagctgatgttatattctgggttttgtctggtttgctgaaacacttaaaagatgaaggttatgtacctgataaaaagtttattct |
164 |
Q |
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| T |
46787561 |
acaaattgcatccggaagctgatgttatattctgggttttgtctggtttgctgaaacacttaaaagatgaaggttatgtacctgataaaaagtttattct |
46787462 |
T |
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| Q |
165 |
cttttacttggaacaagataaagaggactagttaccacatttattctgactattcattttcaatgagaattgagaaccacattgatggttgtccagtaag |
264 |
Q |
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| T |
46787461 |
cttttacttggaacaagataaagaggactagttaccacatttattctgactattcattttcaatgagaattgagaaccacattgatggttgtccagtaag |
46787362 |
T |
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| Q |
265 |
tagctagctgccagcaatgttatgttggatttgtacttagatgaaacactatgcatgtacgacactgataaggacgaagggattatgtaggagcacaact |
364 |
Q |
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| T |
46787361 |
tagctagctgccagcaatgttatgttggatttgtacttagatgaaacactatgcatgtacgacactgataaggacgaagggagtatgtaggagcacaact |
46787262 |
T |
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| Q |
365 |
taactaaattattctcaataagaaaattgattaactaatttagtttnnnnnnnttaaaattgtctacaatttgtactagtattat |
449 |
Q |
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| T |
46787261 |
taattaaattattctcaataagaaaattgattaactaatttagttaaaaaaaattaaaattgtctacaatttgtactagtattat |
46787177 |
T |
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