View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13760_low_13 (Length: 286)

Name: NF13760_low_13
Description: NF13760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13760_low_13
NF13760_low_13
[»] chr6 (20 HSPs)
chr6 (28-286)||(235224-235489)
chr6 (28-246)||(28075665-28075889)
chr6 (28-286)||(17353795-17354060)
chr6 (55-286)||(27788722-27788952)
chr6 (55-209)||(20711754-20711907)
chr6 (72-209)||(34397776-34397914)
chr6 (83-246)||(19987043-19987207)
chr6 (55-197)||(19737726-19737867)
chr6 (55-173)||(13727433-13727550)
chr6 (55-173)||(21479449-21479566)
chr6 (55-173)||(33774072-33774189)
chr6 (55-173)||(21280500-21280617)
chr6 (55-141)||(24711033-24711118)
chr6 (72-141)||(30832573-30832643)
chr6 (73-120)||(1155899-1155946)
chr6 (72-125)||(21183724-21183777)
chr6 (83-120)||(27994778-27994815)
chr6 (73-125)||(2477634-2477686)
chr6 (89-125)||(20611794-20611830)
chr6 (132-172)||(30121706-30121746)
[»] chr8 (30 HSPs)
chr8 (28-286)||(42600620-42600885)
chr8 (28-286)||(10917230-10917494)
chr8 (55-285)||(23798295-23798524)
chr8 (55-190)||(23606663-23606797)
chr8 (55-197)||(45475745-45475886)
chr8 (72-197)||(41879109-41879235)
chr8 (72-197)||(13534735-13534861)
chr8 (72-197)||(13624275-13624401)
chr8 (72-173)||(30883281-30883383)
chr8 (55-173)||(5860778-5860895)
chr8 (72-173)||(2952270-2952372)
chr8 (55-173)||(3048551-3048668)
chr8 (55-125)||(7944556-7944624)
chr8 (72-123)||(34789911-34789962)
chr8 (72-125)||(5942697-5942750)
chr8 (132-172)||(25561640-25561680)
chr8 (132-170)||(8102845-8102883)
chr8 (72-125)||(8102913-8102966)
chr8 (72-125)||(11290185-11290238)
chr8 (132-172)||(8646129-8646169)
chr8 (132-172)||(15167547-15167587)
chr8 (55-126)||(37430192-37430261)
chr8 (73-125)||(39332455-39332507)
chr8 (132-172)||(41677307-41677347)
chr8 (55-125)||(15078759-15078827)
chr8 (135-172)||(11290113-11290150)
chr8 (72-125)||(15167464-15167517)
chr8 (87-124)||(38009203-38009240)
chr8 (132-172)||(7944656-7944696)
chr8 (132-172)||(15078689-15078729)
[»] chr3 (31 HSPs)
chr3 (55-286)||(53506918-53507147)
chr3 (55-209)||(34290670-34290823)
chr3 (55-286)||(44708318-44708549)
chr3 (55-282)||(54407192-54407417)
chr3 (28-286)||(50939233-50939498)
chr3 (55-209)||(43207272-43207424)
chr3 (55-209)||(9878721-9878874)
chr3 (55-246)||(37168248-37168439)
chr3 (83-209)||(48157058-48157185)
chr3 (72-197)||(8073387-8073512)
chr3 (55-197)||(3953930-3954071)
chr3 (55-173)||(54619237-54619354)
chr3 (28-173)||(27078569-27078720)
chr3 (28-173)||(27084366-27084517)
chr3 (55-173)||(38681127-38681244)
chr3 (83-180)||(18372427-18372525)
chr3 (55-141)||(21582758-21582843)
chr3 (55-173)||(36716059-36716176)
chr3 (56-173)||(29620423-29620539)
chr3 (55-141)||(47467671-47467756)
chr3 (55-141)||(53149348-53149433)
chr3 (55-127)||(42098803-42098873)
chr3 (132-172)||(29598040-29598080)
chr3 (132-172)||(49393023-49393063)
chr3 (132-172)||(52374590-52374630)
chr3 (83-122)||(49393097-49393136)
chr3 (55-120)||(36605974-36606036)
chr3 (55-123)||(28689395-28689461)
chr3 (72-125)||(54574876-54574929)
chr3 (132-172)||(8420258-8420298)
chr3 (132-172)||(42453344-42453384)
[»] chr1 (33 HSPs)
chr1 (28-286)||(13913479-13913746)
chr1 (28-286)||(19955567-19955831)
chr1 (55-286)||(1366911-1367141)
chr1 (28-209)||(27559564-27559751)
chr1 (28-286)||(40501789-40502054)
chr1 (55-282)||(9173056-9173281)
chr1 (28-209)||(17168883-17169070)
chr1 (55-197)||(23185366-23185507)
chr1 (83-204)||(44895584-44895706)
chr1 (72-197)||(4971666-4971792)
chr1 (55-173)||(9181038-9181155)
chr1 (55-190)||(5316626-5316760)
chr1 (55-197)||(51607472-51607613)
chr1 (72-197)||(50881369-50881495)
chr1 (72-173)||(44655704-44655806)
chr1 (55-157)||(5027528-5027629)
chr1 (86-173)||(27906779-27906867)
chr1 (55-141)||(14146295-14146380)
chr1 (55-141)||(3406413-3406498)
chr1 (55-141)||(3440322-3440407)
chr1 (55-141)||(6771786-6771871)
chr1 (72-141)||(41697185-41697255)
chr1 (72-131)||(16140061-16140120)
chr1 (72-125)||(33170771-33170824)
chr1 (72-125)||(43235818-43235871)
chr1 (132-172)||(39134856-39134896)
chr1 (55-116)||(21740970-21741029)
chr1 (72-122)||(38853537-38853587)
chr1 (92-125)||(26803960-26803993)
chr1 (72-125)||(39134771-39134824)
chr1 (84-125)||(45758506-45758547)
chr1 (87-116)||(52127521-52127550)
chr1 (72-120)||(5533329-5533377)
[»] chr7 (26 HSPs)
chr7 (28-286)||(20091280-20091544)
chr7 (28-246)||(23551069-23551294)
chr7 (28-286)||(48983843-48984107)
chr7 (28-286)||(47984968-47985232)
chr7 (28-246)||(10329409-10329632)
chr7 (55-246)||(24525718-24525907)
chr7 (55-209)||(19692010-19692163)
chr7 (55-286)||(38414909-38415138)
chr7 (83-187)||(25010371-25010476)
chr7 (55-209)||(8239601-8239756)
chr7 (55-190)||(8171572-8171706)
chr7 (55-173)||(18776799-18776916)
chr7 (72-161)||(29077184-29077274)
chr7 (55-141)||(10955468-10955553)
chr7 (55-141)||(12596320-12596405)
chr7 (72-120)||(9021848-9021896)
chr7 (132-172)||(7398380-7398420)
chr7 (132-172)||(17800354-17800394)
chr7 (72-125)||(36891579-36891632)
chr7 (132-172)||(23859002-23859042)
chr7 (72-120)||(23859079-23859127)
chr7 (72-114)||(6765729-6765771)
chr7 (87-125)||(9014825-9014863)
chr7 (72-120)||(17800269-17800317)
chr7 (132-172)||(26917815-26917855)
chr7 (132-172)||(27237556-27237596)
[»] chr4 (39 HSPs)
chr4 (55-286)||(40089360-40089590)
chr4 (28-209)||(34027500-34027687)
chr4 (55-246)||(19498389-19498576)
chr4 (83-286)||(24969278-24969485)
chr4 (55-209)||(32128505-32128658)
chr4 (55-209)||(43455564-43455717)
chr4 (28-209)||(54083241-54083428)
chr4 (83-246)||(38352314-38352478)
chr4 (55-246)||(37777256-37777447)
chr4 (55-209)||(16844942-16845095)
chr4 (55-209)||(2790774-2790927)
chr4 (55-209)||(16882428-16882581)
chr4 (55-197)||(47128920-47129061)
chr4 (72-197)||(35465040-35465166)
chr4 (72-197)||(35779373-35779499)
chr4 (55-190)||(34768607-34768741)
chr4 (72-197)||(10978833-10978959)
chr4 (72-197)||(23509846-23509972)
chr4 (55-197)||(48209173-48209314)
chr4 (72-197)||(13460140-13460266)
chr4 (55-173)||(38209624-38209741)
chr4 (95-197)||(10428276-10428379)
chr4 (86-173)||(55255226-55255314)
chr4 (55-131)||(54780777-54780851)
chr4 (55-141)||(5128875-5128960)
chr4 (72-141)||(1105521-1105591)
chr4 (55-141)||(32915374-32915459)
chr4 (55-141)||(37514648-37514733)
chr4 (55-125)||(4167924-4167992)
chr4 (132-173)||(36118590-36118631)
chr4 (132-172)||(2135451-2135491)
chr4 (132-172)||(37746854-37746894)
chr4 (132-172)||(39329525-39329565)
chr4 (28-58)||(24969505-24969535)
chr4 (132-172)||(15735030-15735070)
chr4 (73-125)||(27112036-27112088)
chr4 (132-172)||(30507205-30507245)
chr4 (132-172)||(36178607-36178647)
chr4 (132-172)||(40217164-40217204)
[»] chr5 (32 HSPs)
chr5 (28-286)||(16198791-16199056)
chr5 (29-286)||(9364130-9364393)
chr5 (55-209)||(38869394-38869547)
chr5 (28-286)||(27923921-27924185)
chr5 (55-205)||(28822373-28822522)
chr5 (28-243)||(7670806-7671028)
chr5 (30-283)||(40389535-40389792)
chr5 (55-209)||(16799358-16799510)
chr5 (72-194)||(16592120-16592243)
chr5 (55-197)||(27078939-27079080)
chr5 (55-197)||(30854258-30854398)
chr5 (55-173)||(34756397-34756514)
chr5 (55-141)||(36187910-36187995)
chr5 (72-197)||(22986604-22986719)
chr5 (55-141)||(19523183-19523268)
chr5 (72-141)||(2274874-2274944)
chr5 (72-141)||(15480135-15480205)
chr5 (72-128)||(23284108-23284164)
chr5 (84-125)||(40794385-40794426)
chr5 (132-172)||(11242449-11242489)
chr5 (132-172)||(15639575-15639615)
chr5 (132-172)||(34425832-34425872)
chr5 (72-120)||(36868922-36868970)
chr5 (55-120)||(31194643-31194705)
chr5 (72-125)||(2530943-2530996)
chr5 (72-117)||(10543682-10543727)
chr5 (72-125)||(33037781-33037834)
chr5 (132-172)||(2024771-2024811)
chr5 (132-172)||(7079561-7079601)
chr5 (72-120)||(26718995-26719043)
chr5 (72-120)||(26988739-26988787)
chr5 (132-172)||(40794456-40794496)
[»] chr2 (28 HSPs)
chr2 (28-286)||(27506740-27507005)
chr2 (55-209)||(10762599-10762752)
chr2 (55-286)||(9045868-9046097)
chr2 (55-286)||(26715967-26716196)
chr2 (55-286)||(24410272-24410505)
chr2 (72-197)||(29939911-29940037)
chr2 (122-286)||(8327503-8327669)
chr2 (55-173)||(3155168-3155285)
chr2 (55-173)||(4505845-4505962)
chr2 (72-163)||(6964968-6965060)
chr2 (72-173)||(8907128-8907230)
chr2 (73-173)||(12337498-12337599)
chr2 (55-141)||(3952989-3953074)
chr2 (55-141)||(7162767-7162852)
chr2 (55-125)||(16097008-16097076)
chr2 (72-125)||(37182670-37182723)
chr2 (132-172)||(10252335-10252375)
chr2 (132-172)||(24035679-24035719)
chr2 (132-172)||(29694312-29694352)
chr2 (72-119)||(22727551-22727598)
chr2 (28-58)||(8327690-8327720)
chr2 (72-117)||(12134089-12134134)
chr2 (72-125)||(28425759-28425812)
chr2 (132-172)||(11912892-11912932)
chr2 (132-172)||(12134174-12134214)
chr2 (132-172)||(37182598-37182638)
chr2 (132-172)||(38400726-38400766)
chr2 (73-125)||(38400798-38400850)
[»] scaffold0039 (1 HSPs)
scaffold0039 (55-204)||(106459-106607)
[»] scaffold0070 (1 HSPs)
scaffold0070 (72-197)||(1271-1397)
[»] scaffold0001 (1 HSPs)
scaffold0001 (76-141)||(181903-181969)
[»] scaffold0012 (1 HSPs)
scaffold0012 (72-125)||(206538-206591)
[»] scaffold1590 (1 HSPs)
scaffold1590 (72-119)||(307-354)
[»] scaffold0227 (1 HSPs)
scaffold0227 (72-125)||(16028-16081)
[»] scaffold0022 (2 HSPs)
scaffold0022 (132-172)||(40012-40052)
scaffold0022 (132-172)||(138072-138112)
[»] scaffold0007 (2 HSPs)
scaffold0007 (132-172)||(230993-231033)
scaffold0007 (72-120)||(230908-230956)
[»] scaffold1320 (2 HSPs)
scaffold1320 (55-125)||(1355-1423)
scaffold1320 (132-172)||(1285-1325)
[»] scaffold0018 (2 HSPs)
scaffold0018 (72-125)||(173559-173612)
scaffold0018 (132-172)||(173644-173684)


Alignment Details
Target: chr6 (Bit Score: 153; Significance: 4e-81; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 28 - 286
Target Start/End: Original strand, 235224 - 235489
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  235224 aaaaagcaatgatctatttatattttttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgag 235323  T
Q  121 aaacccccaccaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnntttt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||        |||    
T  235324 aaacccccaccaacaccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaa-gggacagaaaatggttgagggtattaaaaaaaattt 235422  T
Q  221 ggagggcagtagtactagtgggtatt-nnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    ||||||||||||||||||||||||||          || ||||||||||||||||||||||||||||    
T  235423 ggagggcagtagtactagtgggtattaaaaaaaaaattaaggtccatgactgagggaggcccagctc 235489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 28 - 246
Target Start/End: Complemental strand, 28075889 - 28075665
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||||||||| |||||||||||||||||||       ||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||    
T  28075889 aaaaagcaatgttctatttatattttttaaaagataaatataaggtgccg--tatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgag 28075792  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttt 219  Q
     |||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||         |    
T  28075791 gaacccccacctaacaccaaaaacaagaggacctaattctaataggcataaaaggctaaaacaaggagacagaaaatggctgggggtattaaaaaaaaat 28075692  T
Q  220 tggagggcagtagtactagtgggtatt 246  Q
    |||||| ||||||||||||||||||||    
T  28075691 tggaggacagtagtactagtgggtatt 28075665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 17354060 - 17353795
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||||||||| |||||||||||||||||||       ||||||||| ||  ||||||||| ||||||||||| ||||||||||||| |||||||||||     
T  17354060 aaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgat 17353963  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt-nnnnnnntt 218  Q
     |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||              
T  17353962 gaacccccacctaacaccaaaagcaagaggacctaattctaatagacctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaaa 17353863  T
Q  219 ttggagggcagtagtactagtgggtattnnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    || |||||||||||||||||||||||||         |||||| ||||||||||||||||||||||||    
T  17353862 ttagagggcagtagtactagtgggtattaaaaaaaaattgaggcccatgactgagggaggcccagctc 17353795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 55 - 286
Target Start/End: Original strand, 27788722 - 27788952
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||    
T  27788722 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagatgacct 27788819  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttttggagggcagtagtactagtgggtatt-nnnnnn 252  Q
    |||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||         ||||||||||||| ||||||||||||||           
T  27788820 aattttaataggcctaaaagactaaaataaggggacagaaaatggttgggggtattaaaaaaa-attggagggcagtaatactagtgggtattaaaaaaa 27788918  T
Q  253 nnnttgaggtccatgactgagggaggcccagctc 286  Q
       |||||| ||||||||||||||||||||||||    
T  27788919 aatttgaggcccatgactgagggaggcccagctc 27788952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 20711754 - 20711907
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| | ||||  |||||||||| |||||    
T  20711754 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccatctaacattaaaagcaagatgacct 20711851  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  20711852 aattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtatt 20711907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 72 - 209
Target Start/End: Complemental strand, 34397914 - 34397776
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||||||| |||||| |||||||||| |||| ||||||| |||| ||||  |||||||||||||||| ||||||||||||||||||||||    
T  34397914 gtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgaggaacctccacttaacaccaaaagcaagaagacctaattctaataggcctaa 34397815  T
Q  171 aaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  34397814 aaggctaaaacaagaggacagaaaatggttgggggtatt 34397776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 83 - 246
Target Start/End: Complemental strand, 19987207 - 19987043
Alignment:
Q  83 gtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaac 181  Q
    ||||||||||| |||||||||  |||| ||||||| || || ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19987207 gtacacccaaatgtgaaaatggttaccatatacataaggaatccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaac 19987108  T
Q  182 aaggggacagaaaatggttgggggtattnnnnnnnttttggagggcagtagtactagtgggtatt 246  Q
    |||||||| |||||||| ||||||||||         ||| ||||||||||||||||||||||||    
T  19987107 aaggggacggaaaatggctgggggtattaaaaaaaaattgaagggcagtagtactagtgggtatt 19987043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 19737726 - 19737867
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||| | |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||    
T  19737726 taaatacaaggtgccg--tatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 19737823  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatg 197  Q
    |||| |||||  ||||||||||||||||||| ||||||||||||    
T  19737824 aattttaataatcctaaaaggctaaaacaagaggacagaaaatg 19737867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 13727433 - 13727550
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||    
T  13727433 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 13727530  T
Q  154 aattctaataggcctaaaag 173  Q
    ||||||||||  ||||||||    
T  13727531 aattctaataatcctaaaag 13727550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 21479566 - 21479449
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||    
T  21479566 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 21479469  T
Q  154 aattctaataggcctaaaag 173  Q
    ||||||||||  ||||||||    
T  21479468 aattctaataatcctaaaag 21479449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 33774189 - 33774072
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||    
T  33774189 taaatacaaggtgccg--tatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 33774092  T
Q  154 aattctaataggcctaaaag 173  Q
    ||||||||||  ||||||||    
T  33774091 aattctaataatcctaaaag 33774072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 21280617 - 21280500
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||| ||||||||||||||||||||||| ||| |||||| |||||||||| |||||||| ||    
T  21280617 taaatacaaggtgccg--tatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaactcccacctaacaccaaaatcaagaggaact 21280520  T
Q  154 aattctaataggcctaaaag 173  Q
    ||||||||||  ||||||||    
T  21280519 aattctaataatcctaaaag 21280500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 24711033 - 24711118
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  ||||||||  |||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  24711033 taaatacaaggtgccg--tatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 24711118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 30832573 - 30832643
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||||||  ||||||||| || |||||||||||||||||| |||||| |||||||||| ||||||||||    
T  30832573 gtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaacccccacctaacaccaaaa 30832643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 1155899 - 1155946
Alignment:
Q  73 tatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||||||    
T  1155899 tatatatgcggtacatccagaggtgaaaatgactaccgtatacatgag 1155946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 21183724 - 21183777
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||  |||||||||||| ||||||| ||||||||||||||||| ||||    
T  21183724 gtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacc 21183777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 120
Target Start/End: Complemental strand, 27994815 - 27994778
Alignment:
Q  83 gtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  27994815 gtacactcaaaggtgaaaatcactaccgtatacatgag 27994778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 2477634 - 2477686
Alignment:
Q  73 tatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||  |||||| ||| |||||||| ||||||||||||||||| ||||    
T  2477634 tatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 2477686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 20611830 - 20611794
Alignment:
Q  89 ccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  20611830 ccaaaggtgaaaatcactaccgtatacatgaggaacc 20611794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 30121746 - 30121706
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||||||||||||||||||||  |||||||||| |||||||    
T  30121746 aacaccaaaagcaagaggacccgattctaatagacctaaaa 30121706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 9e-73; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 42600885 - 42600620
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    |||||||||||||||||||||||||||||||       ||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||    
T  42600885 aaaaagcaatgatctatttatattttttaaaagataaatataaggtgccg--tatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgag 42600788  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttt 219  Q
     |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||       |||    
T  42600787 gaacccccacctaacaccaaaagcaagaagacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctggggttattaaattttttt 42600688  T
Q  220 tggagggcagtagtactagtgggtatt-nnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    |||||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||    
T  42600687 tggagggcagtagtactagtgggtattaaaaataaaattgaggcccatgactgagggaggcccagctc 42600620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 10917494 - 10917230
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||| |||||||||||||||||||||||||       ||||||||||||  ||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  10917494 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccttatacatgag 10917397  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttt 219  Q
     |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||    
T  10917396 gaacccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaattttttt 10917297  T
Q  220 tggagggcagtagtactagtgggtattnnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    || || |||||||||||||||||||||         ||| || |||||| |||||||||||||||||    
T  10917296 tgaagagcagtagtactagtgggtattaaaaaaaaattgtggcccatgagtgagggaggcccagctc 10917230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 55 - 285
Target Start/End: Original strand, 23798295 - 23798524
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  23798295 taaatataaggtgccg--tatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 23798392  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttttggagggcagtagtactagtgggtatt-nnnnnn 252  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||         ||||||||||||| ||||||||||||||           
T  23798393 aattctaataggcctaaaagactaaaacaaggggacagaaaatggttgggggtattaaaaaca-attggagggcagtaatactagtgggtattaaaaaaa 23798491  T
Q  253 nnnttgaggtccatgactgagggaggcccagct 285  Q
       |||||| |||||||||||||||||||||||    
T  23798492 aatttgaggcccatgactgagggaggcccagct 23798524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 55 - 190
Target Start/End: Original strand, 23606663 - 23606797
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  23606663 taaatataaggtgccg--tatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 23606760  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggaca 190  Q
    |||||||||||||||||||| ||||||||||||||||    
T  23606761 aattctaataggcctaaaagactaaaacaaggggaca 23606797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 45475886 - 45475745
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||    
T  45475886 taaatacaaggtgccg--tatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggaact 45475789  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatg 197  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  45475788 aattctaataggcctaaaaggctaaaacaagaggacagaaaatg 45475745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 72 - 197
Target Start/End: Complemental strand, 41879235 - 41879109
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||| ||||||||||||  |||||    
T  41879235 gtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 41879136  T
Q  171 aaggctaaaacaaggggacagaaaatg 197  Q
    |||||||||||||| ||||||||||||    
T  41879135 aaggctaaaacaagaggacagaaaatg 41879109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 13534735 - 13534861
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||| | ||||||||||||  |||||    
T  13534735 gtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagagaaactaattctaataatcctaa 13534834  T
Q  171 aaggctaaaacaaggggacagaaaatg 197  Q
    |||||||||||||| ||||||||||||    
T  13534835 aaggctaaaacaagaggacagaaaatg 13534861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 13624275 - 13624401
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||| | ||||||||||||  |||||    
T  13624275 gtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagagaaactaattctaataatcctaa 13624374  T
Q  171 aaggctaaaacaaggggacagaaaatg 197  Q
    |||||||||||||| ||||||||||||    
T  13624375 aaggctaaaacaagaggacagaaaatg 13624401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 30883383 - 30883281
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||||||||||||  |||||    
T  30883383 gtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 30883284  T
Q  171 aag 173  Q
    |||    
T  30883283 aag 30883281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 5860778 - 5860895
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||||| ||    
T  5860778 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaaaccccaacctaacaccaaaatcaagaggaact 5860875  T
Q  154 aattctaataggcctaaaag 173  Q
    ||||||||||  ||||||||    
T  5860876 aattctaataatcctaaaag 5860895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 2952270 - 2952372
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||||||||||||  |||||    
T  2952270 gtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 2952369  T
Q  171 aag 173  Q
    |||    
T  2952370 aag 2952372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 3048551 - 3048668
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||| | || ||||||||||||||||||||| ||| ||||| |||| |||||||||| |||||||| ||    
T  3048551 taaatacaaggtgccg--tatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaaccctcacctaacaccaaaatcaagaggaact 3048648  T
Q  154 aattctaataggcctaaaag 173  Q
    ||||||||||  ||||||||    
T  3048649 aattctaataatcctaaaag 3048668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 7944556 - 7944624
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||| |||||||||  ||||||||  |||||||||||||||||||| ||||||||||||||||| ||||    
T  7944556 taaatacaaggtgccg--tatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgaggaacc 7944624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 34789911 - 34789962
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaa 123  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  34789911 gtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagaaa 34789962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 5942750 - 5942697
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  5942750 gtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacc 5942697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 25561640 - 25561680
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  25561640 aacaccaaaagcaagaggacccaattctaataggcctaaaa 25561680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 8102883 - 8102845
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  8102883 aacaccaaaagcaagaggacccaattctaataggcctaa 8102845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 8102966 - 8102913
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||| ||||||| |||||||||||| | ||||||||||||||| ||||    
T  8102966 gtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacc 8102913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 11290238 - 11290185
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||  |||||| ||||||||||||| ||||||||||||||||| ||||    
T  11290238 gtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagcaacc 11290185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 8646169 - 8646129
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  8646169 aacaccaaaagcaagatgacctaattcgaataggcctaaaa 8646129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 15167547 - 15167587
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  15167547 aacaccaaaagtaagaggacccaattctaataggcctaaaa 15167587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 37430192 - 37430261
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaaccc 126  Q
    |||||| |||||||||  |||||||||  |||||| | |||| ||||||||||||||||||||||| |||||    
T  37430192 taaatacaaggtgccg--tatatatgcgttacacctagaggtaaaaatgactaccgtatacatgaggaaccc 37430261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 39332455 - 39332507
Alignment:
Q  73 tatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||| || ||||| |||||||||||||| ||||||||||||||||| ||||    
T  39332455 tatataagcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacc 39332507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 41677307 - 41677347
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  41677307 aacaccaaaagcaagaggacccgattctaataggcctaaaa 41677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 15078827 - 15078759
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||||||| |  |||||||||  |||||||||| |||||||| |||| |||||||||||| ||||    
T  15078827 taaatataaggtgctg--tatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 15078759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 11290150 - 11290113
Alignment:
Q  135 accaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  11290150 accaaaagcaacaggacccaattctaataggcctaaaa 11290113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 15167464 - 15167517
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    ||||||||||  |||||||||| |||||||| |||| |||||||||||| ||||    
T  15167464 gtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 15167517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 38009203 - 38009240
Alignment:
Q  87 acccaaaggtgaaaatgactaccgtatacatgagaaac 124  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  38009203 acccaaaggtgaaaattactaccatatacatgagaaac 38009240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 7944656 - 7944696
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||||||||||||  |||| ||||||||||||||    
T  7944656 aacaccaaaagcaagaggacacaattttaataggcctaaaa 7944696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 15078729 - 15078689
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||| ||||||||| |||||||| ||||||||||    
T  15078729 aacaccaaaagtaagaggacccaattctaacaggcctaaaa 15078689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 3e-72; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 55 - 286
Target Start/End: Original strand, 53506918 - 53507147
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||||||||| |||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  53506918 taaatataaggtaccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaacaccaaaagcaagaggacct 53507015  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttttggagggcagtagtactagtgggtattnnnnnnn 253  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||           
T  53507016 aattctaataggcctaaaaggctaaaacaaggggacataaaatggttgggggtattaaaaaaa-attggagggcagtagtactagtgggtattaaaaaaa 53507114  T
Q  254 nnttgaggtccatgactgagggaggcccagctc 286  Q
      |||||| ||||||||||||||||||||||||    
T  53507115 aattgaggcccatgactgagggaggcccagctc 53507147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 34290670 - 34290823
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| |||||||||||    
T  34290670 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacctaacaccaaaaacaagaggacct 34290767  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34290768 aattctaataggcctaaaaggctaaaacaaggggacataaaatggttgggggtatt 34290823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 55 - 286
Target Start/End: Complemental strand, 44708549 - 44708318
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||    
T  44708549 taaatataaggtgccg--tatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagatgacct 44708452  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttttggagggcagtagtactagtgggtatt-nnnnnn 252  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||         |||||| |||||||||||||||| ||||           
T  44708451 aattctaataggcctaaaaggctaaaacaaggggacataaaatggctgggggtattaaaaaaaaattggagagcagtagtactagtggatattaaaaaaa 44708352  T
Q  253 nnnttgaggtccatgactgagggaggcccagctc 286  Q
       |||||| ||||||||||||||||||||||||    
T  44708351 aaattgaggcccatgactgagggaggcccagctc 44708318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 55 - 282
Target Start/End: Original strand, 54407192 - 54407417
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  54407192 taaatataaggtgccg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatacat-agtaacccccacctaacaccaaaagcaagaggacct 54407288  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttttggagggcagtagtactagtgggtattnnnnnnn 253  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||         ||||||||||||||||||||| ||||||           
T  54407289 aattctaataggcctaaaaggctaaaagaaggggacagaaaatagctgggggtattaaaaaaaaattggagggcagtagtactagtaggtattaaaaaaa 54407388  T
Q  254 nnttgaggtccatgactgagggaggccca 282  Q
      |||||| ||||||||||||||||||||    
T  54407389 aattgaggcccatgactgagggaggccca 54407417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 28 - 286
Target Start/End: Original strand, 50939233 - 50939498
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    |||||||||||||||||||||||||||||||       ||||||||||||  ||||||||  |||||||||||||| |||||||||||||||||||||||    
T  50939233 aaaaagcaatgatctatttatattttttaaaagataaatataaggtgccgtatatatatg--gtacacccaaaggtaaaaatgactaccgtatacatgag 50939330  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt-nnnnnnntt 218  Q
     ||||||| || |||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||||              
T  50939331 gaacccccgcctaacaccaaaagcaaaaggacctaattctaataggcctaaaagactaaaacaaggagacagaaaatggctggggttattaaaaaaaaaa 50939430  T
Q  219 ttggagggcagtagtactagtgggtattnnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    |||||||||||||||||| |||||||||         |||||| ||||||||||||||||||||||||    
T  50939431 ttggagggcagtagtactggtgggtattaaaaaaaaattgaggcccatgactgagggaggcccagctc 50939498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 43207272 - 43207424
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| ||||| | |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  43207272 taaatataaggtgccg--tatatatgcggtacatc-aaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 43207368  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  43207369 aattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt 43207424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 9878721 - 9878874
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||||||||||| |  ||||||||| ||||||||||||||||||||||||| ||||||||| || |||||||| | ||| ||||||||||||||||||    
T  9878721 taaatataaggtgcag--tatatatgcggtacacccaaaggtgaaaatgactatcgtatacataaggaacccccatctaacgccaaaagcaagaggacct 9878818  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  9878819 aattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt 9878874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 55 - 246
Target Start/End: Complemental strand, 37168439 - 37168248
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||  ||| |||||||||||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||    
T  37168439 taaatataaggtgccg--tatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacactaaaagcaagaggacct 37168342  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt-nnnnnnnttttggagggcagtagtactagtgggtatt 246  Q
    |||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||          ||||||||||||||||||||||||||||    
T  37168341 aattataataggcctaaaaggctaaaacaaggggacataaaatagctgggggtattaaaaaaaaaattggagggcagtagtactagtgggtatt 37168248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 48157185 - 48157058
Alignment:
Q  83 gtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaac 181  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||  |||| ||||||||||||||| |||||||| ||||| ||||||||||||||    
T  48157185 gtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacttaacatcaaaagcaagaggacgtaattctagtaggcttaaaaggctaaaac 48157086  T
Q  182 aaggggacagaaaatggttgggggtatt 209  Q
    ||||||||||||||||| ||||||||||    
T  48157085 aaggggacagaaaatggctgggggtatt 48157058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 8073387 - 8073512
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccaccaacaccaaaagcaagaggacctaattctaataggcctaaa 171  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||    |||||||||||||| |||| ||||||||||||||||||||    
T  8073387 gtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaaccccacataacaccaaaagcaataggaactaattctaataggcctaaa 8073486  T
Q  172 aggctaaaacaaggggacagaaaatg 197  Q
    ||||||||||||| ||||| ||||||    
T  8073487 aggctaaaacaagaggacataaaatg 8073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 3953930 - 3954071
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| ||||||||||||  |||||||||||||| |||||||||| |||||||||| |||||||| ||    
T  3953930 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 3954027  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatg 197  Q
    ||||||||||  ||||||||||||||||||| | ||||||||||    
T  3954028 aattctaataatcctaaaaggctaaaacaagagaacagaaaatg 3954071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 54619237 - 54619354
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||    
T  54619237 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 54619334  T
Q  154 aattctaataggcctaaaag 173  Q
    ||||||||||  ||||||||    
T  54619335 aattctaataatcctaaaag 54619354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 27078569 - 27078720
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||||||||| |||||||||||||||||||       || || ||||||  ||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  27078569 aaaaagcaatgttctatttatattttttaaaagataaatacaaagtgccg--tatatatgcggtatacccagaggtgaaaatgactaccgtatacatgag 27078666  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaag 173  Q
    ||||||| ||| |||||||||| ||||| || ||||||||||||  ||||||||    
T  27078667 aaacccctacctaacaccaaaatcaagatgaactaattctaataatcctaaaag 27078720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 27084366 - 27084517
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||||||||| |||||||||||||||||||       || || ||||||  ||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  27084366 aaaaagcaatgttctatttatattttttaaaagataaatacaaagtgccg--tatatatgcggtatacccagaggtgaaaatgactaccgtatacatgag 27084463  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaag 173  Q
    ||||||| ||| |||||||||| ||||| || ||||||||||||  ||||||||    
T  27084464 aaacccctacctaacaccaaaatcaagatgaactaattctaataatcctaaaag 27084517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 38681127 - 38681244
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||| ||||| ||||| ||| |||||||||||||||||||||||||||| || ||||||| |||||||||| |||||||| ||    
T  38681127 taaatacaaggtgccg--tatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaaaccccacctaacaccaaaatcaagaggaact 38681224  T
Q  154 aattctaataggcctaaaag 173  Q
    ||||||||||  ||||||||    
T  38681225 aattctaataatcctaaaag 38681244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 180
Target Start/End: Complemental strand, 18372525 - 18372427
Alignment:
Q  83 gtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaa 180  Q
    |||||| || |||||||||||||||||||||||||||| || ||||| | |||||||||| |||||||| ||||||||||||  |||||||||||||||    
T  18372525 gtacacacagaggtgaaaatgactaccgtatacatgaggaatccccatctaacaccaaaatcaagaggaactaattctaataatcctaaaaggctaaaa 18372427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 21582843 - 21582758
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  21582843 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 21582758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 36716059 - 36716176
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| ||||||||| ||| ||||||||| ||||  ||||||||| |||||||||| |||||||| ||    
T  36716059 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagggacccccacctaacaccaaaatcaagaggaact 36716156  T
Q  154 aattctaataggcctaaaag 173  Q
    ||||||||||  ||||||||    
T  36716157 aattctaataatcctaaaag 36716176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 29620423 - 29620539
Alignment:
Q  56 aaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggaccta 154  Q
    ||||| |||||||||  ||||||||| ||| | ||| |||||||||||||||||||||||||||| |||||||||| ||||||| || |||||||| |||    
T  29620423 aaatacaaggtgccg--tatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccacaatcaagaggaacta 29620520  T
Q  155 attctaataggcctaaaag 173  Q
    ||| |||||  ||||||||    
T  29620521 attttaataatcctaaaag 29620539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 47467756 - 47467671
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  |||||||||  |||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  47467756 taaatacaaggtgccg--tatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 47467671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 53149348 - 53149433
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  ||||||||| |||||| || || | ||||||||||||||||||||||| |||||||||| ||||||||||    
T  53149348 taaatacaaggtgccg--tatatatgcggtacactcagagataaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 53149433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 42098873 - 42098803
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccc 127  Q
    |||||| |||||||||  ||||||||| ||| || || |||||||||||||||||||||||||||| ||||||    
T  42098873 taaatacaaggtgccg--tatatatgcggtatactcagaggtgaaaatgactaccgtatacatgaggaacccc 42098803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 29598080 - 29598040
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  29598080 aacaccaaaagcaagatgacctaattctaataggcctaaaa 29598040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 49393063 - 49393023
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  49393063 aacaccaaaagtaagaggacctaattctaataggcctaaaa 49393023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 52374630 - 52374590
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  52374630 aacaccaaaagcaagaggactcaattctaataggcctaaaa 52374590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 49393136 - 49393097
Alignment:
Q  83 gtacacccaaaggtgaaaatgactaccgtatacatgagaa 122  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  49393136 gtacacccaaaggtaaaaattactaccgtatacatgagaa 49393097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 36606036 - 36605974
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    |||||| |||||||||  ||||||||| ||||||||| || ||||||| |||||||||||||||||    
T  36606036 taaatacaaggtgccg--tatatatgcggtacacccagagatgaaaat-actaccgtatacatgag 36605974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 28689395 - 28689461
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaa 123  Q
    |||||| |||||||||  |||||||||  || | |||||||||||||| ||| ||||||||||||||||    
T  28689395 taaatacaaggtgccg--tatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgagaaa 28689461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 54574876 - 54574929
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||| ||||||||||| || ||||| |||||| |||||||||| ||||    
T  54574876 gtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgaggaacc 54574929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 8420298 - 8420258
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||||||||| ||| |||||||||| ||||||||    
T  8420298 aacaccaaaagcaagagaacccaattctaatatgcctaaaa 8420258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 42453384 - 42453344
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||| ||||||||  |||||||||||||||||||    
T  42453384 aacaccaaaagtaagaggactcaattctaataggcctaaaa 42453344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 3e-72; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 286
Target Start/End: Original strand, 13913479 - 13913746
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    |||||||||||||||||||||||||||||||       |||||| |||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  13913479 aaaaagcaatgatctatttatattttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgag 13913578  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt-nnnnnnntt 218  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||              
T  13913579 aaacccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaatgggacagaaaatggttgggggtattaaaaaaaaaa 13913678  T
Q  219 ttggagggcagtagtactagtgggtattnnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    ||| ||||||||||||||||||||||||         |||||| ||||||||||||||||||||||||    
T  13913679 ttgaagggcagtagtactagtgggtattaaaaaaaaattgaggcccatgactgagggaggcccagctc 13913746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 19955831 - 19955567
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    |||||||||||||||||||||||||||||||       |||||||| |||  ||||||||| |||||||||||||||||||||||||||||||| |||||    
T  19955831 aaaaagcaatgatctatttatattttttaaaagataaatataaggtaccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgag 19955734  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttt 219  Q
     |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||        |||    
T  19955733 gaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtataattttttttt 19955634  T
Q  220 tggagggcagtagtactagtgggtattnnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    |||||||||| ||||||||||||||||         |||||| |||||||||||||||| |||||||    
T  19955633 tggagggcagcagtactagtgggtattaaaaaaaaattgaggcccatgactgagggaggtccagctc 19955567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 55 - 286
Target Start/End: Original strand, 1366911 - 1367141
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||| |||||||||||||||| |||||    
T  1366911 taaatataaggtgccg--tatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaacccccacctaacaccaaaagcaagatgacct 1367008  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttttggagggcagtagtactagtgggtatt-nnnnnn 252  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||       ||||||||||||||| ||||||||||||||           
T  1367009 aattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt-aaaaaattttggagggcagtaatactagtgggtattaaaattt 1367107  T
Q  253 nnnttgaggtccatgactgagggaggcccagctc 286  Q
       |||||| ||||||||||||||||||||||||    
T  1367108 tttttgaggcccatgactgagggaggcccagctc 1367141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 27559751 - 27559564
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||||||||| |||||||||||||||||||       ||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27559751 aaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 27559654  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
     |||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27559653 gaacccccacctaacaccataagtaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtatt 27559564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 28 - 286
Target Start/End: Original strand, 40501789 - 40502054
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    |||||| ||||||||||||||||||||||||       ||||||||| ||  ||||||||| |||||||||||||| ||||||||||||||||||||||     
T  40501789 aaaaagtaatgatctatttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaa 40501886  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttt 219  Q
     |||| ||||| |||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||        ||    
T  40501887 gaacctccacctaacaccaaaagcaagatgatctaattctaatagacctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaatt 40501986  T
Q  220 tggagggcagtagtactagtgggtatt-nnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    | |||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||    
T  40501987 tagagggcagtagtactagtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctc 40502054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 55 - 282
Target Start/End: Original strand, 9173056 - 9173281
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  9173056 taaatataaggtgccg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagtaagaggacct 9173153  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttttggagggcagtagtactagtgggtattnnnnnnn 253  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||         |||||||||| || ||||||||||||||           
T  9173154 aattctaataggcctaaaagactaaaacaaggggacagaaaatggctggggatattaaaaaaa-attggagggcaataatactagtgggtattaaaaaaa 9173252  T
Q  254 nnttgaggtccatgactgagggaggccca 282  Q
      |||||| ||||||||||||||||||||    
T  9173253 aattgaggcccatgactgagggaggccca 9173281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 17169070 - 17168883
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||||||||| |||||||||||||||||||       |||||||||  |  ||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  17169070 aaaaagcaatgttctatttatattttttaaaagataaatataaggtgttg--tatatatgcggtacacccaaaggtgaaaatgactaccatatacatgag 17168973  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
     |||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17168972 gaacccctacctaacaccaaaagcaagaagacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtatt 17168883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 23185507 - 23185366
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||    
T  23185507 taaatacaaggtgccg--tatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggaact 23185410  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatg 197  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  23185409 aattctaataggcctaaaaggctaaaacaagaggacagaaaatg 23185366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 44895706 - 44895584
Alignment:
Q  83 gtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaac 181  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44895706 gtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaac 44895607  T
Q  182 aaggggacagaaaatggttgggg 204  Q
    || |||||||||||||| |||||    
T  44895606 aaagggacagaaaatggctgggg 44895584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 4971666 - 4971792
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||||||||| | |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  4971666 gtatatatgcggtacacccataagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggaactaattctaataggcctaa 4971765  T
Q  171 aaggctaaaacaaggggacagaaaatg 197  Q
    |||||||||||||| ||||| ||||||    
T  4971766 aaggctaaaacaagaggacaaaaaatg 4971792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 9181038 - 9181155
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  9181038 taaatataaggtgccg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 9181135  T
Q  154 aattctaataggcctaaaag 173  Q
    ||||||||||||||||||||    
T  9181136 aattctaataggcctaaaag 9181155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 55 - 190
Target Start/End: Complemental strand, 5316760 - 5316626
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||    
T  5316760 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 5316663  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggaca 190  Q
    ||||||||||  ||||||||||||||||||| |||||    
T  5316662 aattctaataatcctaaaaggctaaaacaagaggaca 5316626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 51607472 - 51607613
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaaccccca-ccaacaccaaaagcaagaggacct 153  Q
    ||||||||||||| | | ||||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||| | || ||||||||||||||||| |    
T  51607472 taaatataaggtggccg-tatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaactcccatctaataccaaaagcaagaggacat 51607570  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatg 197  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||    
T  51607571 aattctaataggcctaaaaggctaaaa-aagggaacagaaaatg 51607613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 72 - 197
Target Start/End: Complemental strand, 50881495 - 50881369
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||||| | | |||||||||||||||| ||||||||||| |||| ||||| ||||||||||  ||||||| ||||||||||||  |||||    
T  50881495 gtatatatgcggtacatctagaggtgaaaatgactacagtatacatgaggaacctccacctaacaccaaaattaagaggaactaattctaataatcctaa 50881396  T
Q  171 aaggctaaaacaaggggacagaaaatg 197  Q
    |||||||||||||| ||||||||||||    
T  50881395 aaggctaaaacaagaggacagaaaatg 50881369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 44655806 - 44655704
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||||||||||||  |||||    
T  44655806 gtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 44655707  T
Q  171 aag 173  Q
    |||    
T  44655706 aag 44655704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 5027629 - 5027528
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||| |||| ||||| |||||||||| ||||||||||||||||||| ||    
T  5027629 taaatacaaggtgccg--tatatatgcggtacacccataggtgaaaatgactaccatatagatgaggaacccccacctaacaccaaaagcaagaggaact 5027532  T
Q  154 aatt 157  Q
    ||||    
T  5027531 aatt 5027528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 27906779 - 27906867
Alignment:
Q  86 cacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaag 173  Q
    |||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||||||||||||  ||||||||    
T  27906779 cacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaag 27906867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 14146380 - 14146295
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  ||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||| ||||||||||    
T  14146380 taaatacaaggtgccg--tatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 14146295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 3406498 - 3406413
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  ||||||||| |||||| |  |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  3406498 taaatacaaggtgccg--tatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 3406413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 3440322 - 3440407
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  ||||||||| |||||| |  |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  3440322 taaatacaaggtgccg--tatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 3440407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 6771871 - 6771786
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||| ||| |||| ||||| ||||||||||    
T  6771871 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaacctccacctaacaccaaaa 6771786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 41697185 - 41697255
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||||||| ||||| ||| | |||||||||||||||||||||||||| |||||||||| ||||||||||    
T  41697185 gtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 41697255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 16140120 - 16140061
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc 131  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||| || |||||||    
T  16140120 gtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaatccccacc 16140061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 33170824 - 33170771
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||| ||||||| || ||||||||| ||||||||||||||||||||||    
T  33170824 gtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaaacc 33170771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 43235818 - 43235871
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||  |||||||||||||||||||| |||| |||||||||||| ||||    
T  43235818 gtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacc 43235871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 39134856 - 39134896
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  39134856 aacaccaaaagcaagaggacccaattctaataggcttaaaa 39134896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 21740970 - 21741029
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtataca 116  Q
    |||||| |||||||||  |||||||||  |||||||| ||||||||||||||||| ||||||    
T  21740970 taaatacaaggtgccg--tatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 38853587 - 38853537
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaa 122  Q
    |||||||||  ||| | |||||||||||||| |||||||||||||||||||    
T  38853587 gtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgagaa 38853537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 26803993 - 26803960
Alignment:
Q  92 aaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    ||||||||||| ||||||||||||||||||||||    
T  26803993 aaggtgaaaatcactaccgtatacatgagaaacc 26803960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 39134771 - 39134824
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    ||||||||||  ||||||||||||||| ||| ||||| ||||||||||| ||||    
T  39134771 gtatatatgcaatacacccaaaggtgataatcactactgtatacatgaggaacc 39134824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 45758547 - 45758506
Alignment:
Q  84 tacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||| |||||||||||||| ||||||||||||||||| ||||    
T  45758547 tacatccaaaggtgaaaatcactaccgtatacatgaggaacc 45758506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 116
Target Start/End: Original strand, 52127521 - 52127550
Alignment:
Q  87 acccaaaggtgaaaatgactaccgtataca 116  Q
    ||||||||||||||||||||||||||||||    
T  52127521 acccaaaggtgaaaatgactaccgtataca 52127550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 5533377 - 5533329
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    |||||||||  |||||  ||||||||||||| |||||||||||||||||    
T  5533377 gtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgag 5533329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 8e-70; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 28 - 286
Target Start/End: Original strand, 20091280 - 20091544
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||| |||||||||||||||||||||||||       ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20091280 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 20091377  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttt 219  Q
     |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||         |    
T  20091378 gaacccccacctaacaccaaaagtaagaggacctaattctaataggcctaaaaggctaaaacaagggtacataaaatggttgggggtattaaaaaaaaat 20091477  T
Q  220 tggagggcagtagtactagtgggtattnnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    ||||||||||||||||| |||||||||         |||||| ||||||||||||||||||||||||    
T  20091478 tggagggcagtagtactggtgggtattaaaaaaaaattgaggcccatgactgagggaggcccagctc 20091544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 28 - 246
Target Start/End: Original strand, 23551069 - 23551294
Alignment:
Q  28 aaaaagcaatgatctatttatatttttt--------aaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatga 119  Q
    ||||||||||||||||||||||||||||        |||||||||||| ||  ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  23551069 aaaaagcaatgatctatttatatttttttaaaagataaatataaggtgtcg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatacatga 23551166  T
Q  120 gaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnntt 218  Q
    | |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| | ||||||||       ||    
T  23551167 ggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaagctaaaacaaggggacaaaaaatggctaggggtattaaatttttt 23551266  T
Q  219 ttggagggcagtagtactagtgggtatt 246  Q
    ||||||||||||||||||||||||||||    
T  23551267 ttggagggcagtagtactagtgggtatt 23551294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 28 - 286
Target Start/End: Original strand, 48983843 - 48984107
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||| |||||||||||||||||||||||||       ||||||||| ||  ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  48983843 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaataactaccgtatacatgag 48983940  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttt 219  Q
     |||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||         |    
T  48983941 gaacccccacctaacaccaaaagtaagaggacttaattctaataggcctaaaaggctaaaacaagggtacaaaaaatggttgggggtattaaaaaaaaat 48984040  T
Q  220 tggagggcagtagtactagtgggtattnnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    |||||||||||||||||||||||||||         |||||| ||||||||||||||||||||||||    
T  48984041 tggagggcagtagtactagtgggtattaaaaaaaaattgaggcccatgactgagggaggcccagctc 48984107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 28 - 286
Target Start/End: Original strand, 47984968 - 47985232
Alignment:
Q  28 aaaaagcaatgatctatttatatttttt--------aaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatga 119  Q
    ||||||||||| ||||||||||||||||        |||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||    
T  47984968 aaaaagcaatgttctatttatatttttttaaaagaaaaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatga 47985065  T
Q  120 gaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnntt 218  Q
    | |||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||             
T  47985066 ggaacccccacctaacacaaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggctggggatattaaaaaaa-a 47985164  T
Q  219 ttggagggcagtagtactagtgggtattnnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    ||||||||||||| ||||||||||||||         |||||| ||||||||||||||||||||||||    
T  47985165 ttggagggcagtaatactagtgggtattaaaaaaaaattgaggcccatgactgagggaggcccagctc 47985232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 28 - 246
Target Start/End: Original strand, 10329409 - 10329632
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||||||||| |||||||||||||||||||       ||||||||||||  ||||||||  | | ||||||||||||||||||||||||||||||||||    
T  10329409 aaaaagcaatgttctatttatattttttaaaagataaatataaggtgccg--tatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgag 10329506  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttt 219  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||       | |    
T  10329507 aaacccccacttaacaccaaaagcaagaggacctaattctaataggcgtaaaaggctaaaacaaggggacaaaaaatggctgggggtatt-aaaaaatat 10329605  T
Q  220 tggagggcagtagtactagtgggtatt 246  Q
    |||||||||||||||||||||||||||    
T  10329606 tggagggcagtagtactagtgggtatt 10329632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 55 - 246
Target Start/End: Original strand, 24525718 - 24525907
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||||||||||||| ||||||  || ||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  24525718 taaatataaggtgccgtgtatat--gcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 24525815  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttttggagggcagtagtactagtgggtatt 246  Q
    |||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||         ||||||||||||||||||||||||||||    
T  24525816 aattctaatatgcctaaaaggctaaaacaagggggcagaaaatggctgggggtattaaaaaaa-attggagggcagtagtactagtgggtatt 24525907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 209
Target Start/End: Complemental strand, 19692163 - 19692010
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||||||||||||   ||||||||| ||||||| ||||||||||||||||  |||||||||||| ||||| | || ||||||||||||||||||||||    
T  19692163 taaatataaggtgcca--tatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgaggaaccctcgcctaacaccaaaagcaagaggacct 19692066  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19692065 aattctaataggcctaaaagactaaaacaaggggacagaaaatggttgggggtatt 19692010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 55 - 286
Target Start/End: Original strand, 38414909 - 38415138
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||| ||  ||||||||  |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  38414909 taaatataaggtgacg--tatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 38415006  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttttggagggcagtagtactagtgggtattnnnnnnn 253  Q
    |||||||||||||||||||| |||||||||||| | ||||||||| || |||||||         |||||||||| || ||||||||||||||           
T  38415007 aattctaataggcctaaaagactaaaacaagggaatagaaaatggctgagggtattaaaaaaa-attggagggcaataatactagtgggtattaaaaaaa 38415105  T
Q  254 nnttgaggtccatgactgagggaggcccagctc 286  Q
      |||||| |||||||| |||||||||||||||    
T  38415106 atttgaggcccatgactaagggaggcccagctc 38415138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 83 - 187
Target Start/End: Complemental strand, 25010476 - 25010371
Alignment:
Q  83 gtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaac 181  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25010476 gtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaac 25010377  T
Q  182 aagggg 187  Q
    ||||||    
T  25010376 aagggg 25010371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 55 - 209
Target Start/End: Complemental strand, 8239756 - 8239601
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccc--cacc-aacaccaaaagcaagaggac 151  Q
    ||||||||| ||||||  ||||||||  ||||||||||| |||||||||| ||||||||| ||||| ||||||  |||  ||||||||||||||||||||    
T  8239756 taaatataatgtgccg--tatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacccctccacttaacaccaaaagcaagaggac 8239659  T
Q  152 ctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  8239658 ctaattctaataggcctaaaaggctaaaacaaggggacaacaaatggttgggggtatt 8239601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 55 - 190
Target Start/End: Original strand, 8171572 - 8171706
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||    
T  8171572 taaatacaaggtgccg--tatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 8171669  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggaca 190  Q
    ||||||||||  ||||||||||||||||||| |||||    
T  8171670 aattctaataatcctaaaaggctaaaacaagaggaca 8171706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 18776799 - 18776916
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||    
T  18776799 taaatacaaggtgccg--tatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaacccccacctaacaccaaaaacaagaggaact 18776896  T
Q  154 aattctaataggcctaaaag 173  Q
    ||||||||||  ||||||||    
T  18776897 aattctaataatcctaaaag 18776916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 29077274 - 29077184
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaa 161  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||||||||||    
T  29077274 gtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaa 29077184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 10955553 - 10955468
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    ||||||||||||||||  ||||||||| |||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  10955553 taaatataaggtgccg--tatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 10955468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 12596320 - 12596405
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  ||||||||  ||||||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||    
T  12596320 taaatacaaggtgccg--tatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaacaccaaaa 12596405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 9021848 - 9021896
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||    
T  9021848 gtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgag 9021896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 7398420 - 7398380
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  7398420 aacaccaaaagcaagaggacccaattctaataggcctaaaa 7398380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 17800354 - 17800394
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  17800354 aacaccaaaagcaagaggacccaattctaataggcctaaaa 17800394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 36891632 - 36891579
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||| | ||||| |||||||||||||| ||||||||||||||||| ||||    
T  36891632 gtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacc 36891579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 23859042 - 23859002
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||| ||||||||||| |||||||||||||||||||    
T  23859042 aacaccaaatgcaagaggacccaattctaataggcctaaaa 23859002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 23859127 - 23859079
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||||||||  ||||||||||| ||||||| |||||||||||||||||    
T  23859127 gtatatatgcgatacacccaaagatgaaaattactaccgtatacatgag 23859079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 114
Target Start/End: Original strand, 6765729 - 6765771
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtata 114  Q
    ||||||| |||||||| |||||||||||||| |||||||||||    
T  6765729 gtatataagccgtacatccaaaggtgaaaatcactaccgtata 6765771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 125
Target Start/End: Original strand, 9014825 - 9014863
Alignment:
Q  87 acccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  9014825 acccaaaggtgaaaatcactaccgtatacatgagtaacc 9014863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 17800269 - 17800317
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    |||||||||  ||||||||||| |||||||| |||||||||| ||||||    
T  17800269 gtatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatgag 17800317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 26917815 - 26917855
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||||||||||||||| |||| |||||||||| ||||||||    
T  26917815 aacaccaaaagcaagaagacccaattctaataagcctaaaa 26917855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 27237556 - 27237596
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||| |||||||| |||| |||||||||||||||||||    
T  27237556 aacaccataagcaagatgacccaattctaataggcctaaaa 27237596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 55 - 286
Target Start/End: Complemental strand, 40089590 - 40089360
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  40089590 taaatataaggtgccg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 40089493  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttttggagggcagtagtactagtgggtattnnnnnnn 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||         |||||||||| |||||||||||||||||           
T  40089492 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgagggtattaaaaaaaaattggagggcactagtactagtgggtattaaaaaaa 40089393  T
Q  254 nnttgaggtccatgactgagggaggcccagctc 286  Q
      |||||| ||||||||||||||||||||||||    
T  40089392 aattgaggcccatgactgagggaggcccagctc 40089360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 34027687 - 34027500
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||||||||| |||||||||||||||||||       ||||||||| ||  ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  34027687 aaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactacggtatacatgag 34027590  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
     |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34027589 gaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtatt 34027500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 55 - 246
Target Start/End: Complemental strand, 19498576 - 19498389
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||    ||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  19498576 taaatataaggtgccg----tatatgcggtacagccaaaggtgaaaatgactactgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 19498481  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttttggagggcagtagtactagtgggtatt 246  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||         ||||||||||||||||||||||||||||    
T  19498480 aattctaataggcctaaaaggctaaaacaaggggacagataatggctgggggtattaaaaaaa-attggagggcagtagtactagtgggtatt 19498389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 83 - 286
Target Start/End: Complemental strand, 24969485 - 24969278
Alignment:
Q  83 gtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaac 181  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24969485 gtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggatctaattctaataggcctaaaaggctaaaac 24969386  T
Q  182 aaggggacagaaaatggttgggggtatt--nnnnnnnttttggagggcagtagtactagtgggtatt-nnnnnnnnnttgaggtccatgactgagggagg 278  Q
    ||||||||||||||||| ||||||||||           ||||||||||||||||||||||||||||          |||||| ||||||||||||||||    
T  24969385 aaggggacagaaaatggctgggggtattaaaaaaaaaaattggagggcagtagtactagtgggtattaaaaaaaaaattgaggcccatgactgagggagg 24969286  T
Q  279 cccagctc 286  Q
    ||||||||    
T  24969285 cccagctc 24969278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 55 - 209
Target Start/End: Complemental strand, 32128658 - 32128505
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  32128658 taaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacataagaaacccccacctaacaccaaaagcaagaggacct 32128561  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
    |||||||||||||||||||| || ||||||||||||| ||||||| ||||||||||    
T  32128560 aattctaataggcctaaaagactgaaacaaggggacataaaatggctgggggtatt 32128505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 43455564 - 43455717
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||| ||||||||||    
T  43455564 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccgaaagtaagaggacct 43455661  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
    ||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  43455662 aattcaaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtatt 43455717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 54083241 - 54083428
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||| |||||||||||||||||||||||||       ||||||||||||  ||||||||| |||||||||||| | |||||||||||||||||||||||    
T  54083241 aaaaaacaatgatctatttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaagataaaaatgactaccgtatacatgag 54083338  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
     |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||    
T  54083339 gaacccctacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggagacagaaaatggctaggggtatt 54083428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 83 - 246
Target Start/End: Original strand, 38352314 - 38352478
Alignment:
Q  83 gtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaac 181  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38352314 gtacacccaaaggtgaaaatgactaccgtgtacatgaggaacccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaac 38352413  T
Q  182 aaggggacagaaaatggttgggggtattnnnnnnnttttggagggcagtagtactagtgggtatt 246  Q
    ||||||||||||||||| ||||||||||         ||||| ||||||||||||||||||||||    
T  38352414 aaggggacagaaaatggctgggggtattaaaaaaaaattggaaggcagtagtactagtgggtatt 38352478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 55 - 246
Target Start/End: Original strand, 37777256 - 37777447
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| ||||| || | |||||||||||||||| |||||    
T  37777256 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccctcaactaacaccaaaagcaagatgacct 37777353  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt-nnnnnnnttttggagggcagtagtactagtgggtatt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||          ||||||||||||||||||||||||||||    
T  37777354 aattctaataggcctaaaaggctaaaacaaggggacagaaaatagctggaggtattaaaaaaaaaattggagggcagtagtactagtgggtatt 37777447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 55 - 209
Target Start/End: Complemental strand, 16845095 - 16844942
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||| ||  ||||||||  |||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||    
T  16845095 taaatataaggtgtcg--tatatatgtagtacacccaacggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagatgacct 16844998  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  16844997 aattctaataggcctaaaagactaaaacaaggggacagaaaatggtcgggggtatt 16844942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 2790774 - 2790927
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||   |||||||||||||||||    
T  2790774 taaatataaggtaccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaatggcaaaagcaagaggacct 2790871  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
    |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||    
T  2790872 aattctaataggcctaaaagactaaaacaaggggacataaaatggctgggggtatt 2790927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 16882428 - 16882581
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||||||||||||| ||||||| |  ||||||| |||||||||||||||||||||||  ||| | ||||| |||| ||||||||||||||||||||||    
T  16882428 taaatataaggtgccgtgtatatacg--gtacaccaaaaggtgaaaatgactaccgtatgtatggggaaccctcacctaacaccaaaagcaagaggacct 16882525  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  16882526 aattctaataggcctaaaaggctaaaacaaggggacagaaaatagctgggggtatt 16882581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 47129061 - 47128920
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||    
T  47129061 taaatacaaggtgccg--tatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 47128964  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatg 197  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||    
T  47128963 aattctaataatcctaaaaggctaaaacaagaggacagaaaatg 47128920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 197
Target Start/End: Complemental strand, 35465166 - 35465040
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||||||| ||| |||||||| ||||||||||||||||| || ||||||| |||||||||||||| | ||||||||||||||||||||||    
T  35465166 gtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgaggaatccccacctaacaccaaaagcaacatgacctaattctaataggcctaa 35465067  T
Q  171 aaggctaaaacaaggggacagaaaatg 197  Q
    |||||||||||||| ||||||||||||    
T  35465066 aaggctaaaacaagaggacagaaaatg 35465040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 35779373 - 35779499
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||  |||| |||| |||||||||||||| |||||||||||||||||||    
T  35779373 gtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaaccttcacctaacatcaaaagcaagaggaactaattctaataggcctaa 35779472  T
Q  171 aaggctaaaacaaggggacagaaaatg 197  Q
    |||||||||||||| || |||||||||    
T  35779473 aaggctaaaacaagagggcagaaaatg 35779499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 55 - 190
Target Start/End: Original strand, 34768607 - 34768741
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| ||||||||| |||||||||||| ||||||||||||||| |||||||||| |||||||||| |||||||| ||    
T  34768607 taaatataaggtgccg--tatatatgcggtacacccagaggtgaaaatgattaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 34768704  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggaca 190  Q
    ||||||||||  ||||||||||||||||||| |||||    
T  34768705 aattctaataatcctaaaaggctaaaacaagaggaca 34768741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 72 - 197
Target Start/End: Complemental strand, 10978959 - 10978833
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||||||||| | |||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||||||||||||  |||||    
T  10978959 gtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 10978860  T
Q  171 aaggctaaaacaaggggacagaaaatg 197  Q
    |||||||||||||| | ||||||||||    
T  10978859 aaggctaaaacaagagaacagaaaatg 10978833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 23509846 - 23509972
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||||||| | |||||||||||||||||||| ||||||| |||||||||| |||||||||| |||||||| ||||||||||||  |||||    
T  23509846 gtatatatgcggtacacctagaggtgaaaatgactaccgtagacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 23509945  T
Q  171 aaggctaaaacaaggggacagaaaatg 197  Q
    |||||||||||||| ||||||||||||    
T  23509946 aaggctaaaacaagaggacagaaaatg 23509972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 48209314 - 48209173
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| || ||    
T  48209314 taaatacaaggtgccg--tatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaaacccccacctaacaccaaaatcaagaagaact 48209217  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatg 197  Q
    ||||||||||  |||| |||||||||||||| ||||||||||||    
T  48209216 aattctaataatcctataaggctaaaacaagaggacagaaaatg 48209173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 197
Target Start/End: Complemental strand, 13460266 - 13460140
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||| ||||| | ||||||||||||||||||||||| || |||||||||| |||||||||| |||||||| ||||||||||||  |||||    
T  13460266 gtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 13460167  T
Q  171 aaggctaaaacaaggggacagaaaatg 197  Q
    ||||||||||||||  |||||||||||    
T  13460166 aaggctaaaacaagaagacagaaaatg 13460140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 38209624 - 38209741
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||    
T  38209624 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 38209721  T
Q  154 aattctaataggcctaaaag 173  Q
    ||||||||||  ||||||||    
T  38209722 aattctaataatcctaaaag 38209741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 10428276 - 10428379
Alignment:
Q  95 gtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaa 193  Q
    |||||||||||||||||||||||||| |||| ||||| |||||||||| |||||||| |||||| |||||  ||||||||||||||||||| ||||||||    
T  10428276 gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatcaagaggaactaattataataatcctaaaaggctaaaacaagaggacagaa 10428375  T
Q  194 aatg 197  Q
    ||||    
T  10428376 aatg 10428379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 55255314 - 55255226
Alignment:
Q  86 cacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaag 173  Q
    |||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||||||||||||  ||||||||    
T  55255314 cacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaag 55255226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 54780851 - 54780777
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc 131  Q
    |||||| |||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54780851 taaatacaaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 54780777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 5128875 - 5128960
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  ||||||||| || |||||| |||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  5128875 taaatacaaggtgccg--tatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 5128960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 1105591 - 1105521
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||||||| ||||||| | ||||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  1105591 gtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaacccccacctaacaccaaaa 1105521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 32915459 - 32915374
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  ||||||||  ||||||||| |||| ||||||| ||||||||||||||| |||||||||| ||||||||||    
T  32915459 taaatacaaggtgccg--tatatatgtggtacacccagaggtaaaaatgattaccgtatacatgaggaacccccacctaacaccaaaa 32915374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 37514733 - 37514648
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  ||||||||| |||||| || |||||||||||||||||||||||||||  || ||||||| ||||||||||    
T  37514733 taaatacaaggtgccg--tatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaagaatccccacctaacaccaaaa 37514648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 4167924 - 4167992
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||| |||||||||  |||||||||  ||||||||||||||||||| |||||| |||||||||| ||||    
T  4167924 taaatacaaggtgccg--tatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacc 4167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 36118590 - 36118631
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaag 173  Q
    |||||||||||||||| |||| ||||||||||||||||||||    
T  36118590 aacaccaaaagcaagatgacccaattctaataggcctaaaag 36118631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 2135451 - 2135491
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  2135451 aacaccaaaagcaagaggacccaattctaataagcctaaaa 2135491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 37746854 - 37746894
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  37746854 aacaccaaaagcaagatgacccaattctaataggcctaaaa 37746894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 39329525 - 39329565
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  39329525 aacaccaaaagcaagaagaccaaattctaataggcctaaaa 39329565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 24969535 - 24969505
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa 58  Q
    |||||||||||||||||||||||||||||||    
T  24969535 aaaaagcaatgatctatttatattttttaaa 24969505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 15735070 - 15735030
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||||||||||||||| |||| |||||||| ||||||||||    
T  15735070 aacaccaaaagcaagaagacccaattctaacaggcctaaaa 15735030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 27112088 - 27112036
Alignment:
Q  73 tatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||  |||||| ||| |||||||| ||||||||||||||||| ||||    
T  27112088 tatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 27112036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 30507205 - 30507245
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||||||||||||  |||||| ||||||||||||    
T  30507205 aacaccaaaagcaagaggactcaattcttataggcctaaaa 30507245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 36178647 - 36178607
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||||||||||||||||||||  |||||||| |||||||||    
T  36178647 aacaccaaaagcaagaggacccgattctaatgggcctaaaa 36178607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 40217204 - 40217164
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||||||||||||| | |||| |||||||||||||||||||    
T  40217204 aacaccaaaagcaaaatgacccaattctaataggcctaaaa 40217164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 28 - 286
Target Start/End: Original strand, 16198791 - 16199056
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||||||||| |||||||||||||||||||       ||||||||| ||  |||||||||  |||||||||||||||||||||||||||||||||||||    
T  16198791 aaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcg--tatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgag 16198888  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttt 219  Q
     |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||         |    
T  16198889 gaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaat 16198988  T
Q  220 tggagggcagtagtactagtgggtatt-nnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    ||||||||||||||| |||||||||||          |||||| ||||||||||||||||||||||||    
T  16198989 tggagggcagtagtattagtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctc 16199056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 29 - 286
Target Start/End: Complemental strand, 9364393 - 9364130
Alignment:
Q  29 aaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgaga 121  Q
    |||||||||| |||||||||||||||||||       ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||     
T  9364393 aaaagcaatgttctatttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 9364296  T
Q  122 aacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnntttt 220  Q
    |||||||||| |||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| ||||||||||         ||    
T  9364295 aacccccacctaacatcaaaagcaagaggacctaattctaatagacctaaaagactaaaacaaggggacataaaatggctgggggtattaaaaaaaaatt 9364196  T
Q  221 ggagggcagtagtactagtgggtattnnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    |||| |||||||||||||||| ||||         |||||| ||||||||||||||||||||||||    
T  9364195 ggagagcagtagtactagtggatattaaaaaaaaattgaggcccatgactgagggaggcccagctc 9364130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 38869394 - 38869547
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38869394 taaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaacaccaaaagcaagaggacct 38869491  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
    |||||||||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  38869492 aattctaataggcctaaaagactaaaacaaggggacagaaaatgactgggggtatt 38869547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 27924185 - 27923921
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    |||||||||||| ||||||||||||||||||       ||||||||||||  ||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  27924185 aaaaagcaatgacctatttatattttttaaaagataaatataaggtgccg--tatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgag 27924088  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttt 219  Q
     ||| ||| || |||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||         |    
T  27924087 gaacgcccgcctaacaccaaaagcaaaaggacctaattctaataggcctaaaagactaaaacaaggagacagaaaatggttggggatattaaaaaaaaat 27923988  T
Q  220 tggagggcagtagtactagtgggtattnnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    |||||||||||||||||||||||||||         |||||| |||||||||||||||| |||||||    
T  27923987 tggagggcagtagtactagtgggtattaaaaaaaaattgaggcccatgactgagggaggtccagctc 27923921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 55 - 205
Target Start/End: Original strand, 28822373 - 28822522
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  28822373 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatgaacccccacctaacaccaaaagcaagaggacct 28822470  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttggggg 205  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  28822471 aattctaataggcctaaaagactaaaacaaggggacataaaatggttggggg 28822522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 28 - 243
Target Start/End: Complemental strand, 7671028 - 7670806
Alignment:
Q  28 aaaaagcaatgatctatttatatttttt--------aaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatga 119  Q
    ||||||||||| ||||||||||||||||        |||||||||||||||  ||||| | | |||||||||||||||||||||||||||||||||||||    
T  7671028 aaaaagcaatgttctatttatatttttttaaaagataaatataaggtgccg--tatatttacggtacacccaaaggtgaaaatgactaccgtatacatga 7670931  T
Q  120 gaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnntt 218  Q
    |  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||             
T  7670930 ggtatccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaa 7670831  T
Q  219 ttggagggcagtagtactagtgggt 243  Q
    ||||||| |||||||||||||||||    
T  7670830 ttggaggacagtagtactagtgggt 7670806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 30 - 283
Target Start/End: Original strand, 40389535 - 40389792
Alignment:
Q  30 aaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaa 122  Q
    ||||||||| |||||||||||||||||||       ||||||||| ||  ||||||||| ||||| |||||||||||||||||||||||||  ||||| |    
T  40389535 aaagcaatgttctatttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgagga 40389632  T
Q  123 acccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttttg 221  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||         |||    
T  40389633 acccccacctaacactaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaca-attg 40389731  T
Q  222 gagggcagtagtactagtgggtattnnnnnnnnnttgaggtccatgactgagggaggcccag 283  Q
    || |||| |||||||||||||||||         ||||||||||||||||||||||||||||    
T  40389732 gatggcaatagtactagtgggtatt-aaaaaaaattgaggtccatgactgagggaggcccag 40389792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 16799358 - 16799510
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  16799358 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccacataacaccaaaagcaagaggacct 16799455  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
    ||||||||||| |||||||| |||||||||||||||| |||| || ||||||||||    
T  16799456 aattctaatagacctaaaagactaaaacaaggggaca-aaaaaggctgggggtatt 16799510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 16592120 - 16592243
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||| |||||||||| |||||||| ||||||||||||  |||||    
T  16592120 gtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 16592219  T
Q  171 aaggctaaaacaaggggacagaaa 194  Q
    ||||||||||||||  ||||||||    
T  16592220 aaggctaaaacaagatgacagaaa 16592243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 27079080 - 27078939
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||| |||||||||||||||||| ||||||||||| |||||||||| ||||||||||   |||||| ||    
T  27079080 taaatacaaggtgccg--tatatatgcggtacacctaaaggtgaaaatgactactgtatacatgaggaacccccacctaacaccaaaatatagaggaact 27078983  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatg 197  Q
    ||||| ||||  ||||||||||||||||||| ||||||||||||    
T  27078982 aattccaataatcctaaaaggctaaaacaagaggacagaaaatg 27078939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 30854398 - 30854258
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| |||||| || ||||||||||||||| |||||||||||| |||||||||| ||||||||||  ||||||| ||    
T  30854398 taaatacaaggtgccg--tatatatgcggtacactcagaggtgaaaatgactatcgtatacatgaggaacccccacctaacaccaaaa-taagaggaact 30854302  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatg 197  Q
    ||||||||||  ||||||||||||||||||| ||||| ||||||    
T  30854301 aattctaataatcctaaaaggctaaaacaagaggacataaaatg 30854258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 34756397 - 34756514
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||| ||    
T  34756397 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaacaaaatcaagaggaact 34756494  T
Q  154 aattctaataggcctaaaag 173  Q
    ||||||||||  ||||||||    
T  34756495 aattctaataatcctaaaag 34756514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 36187910 - 36187995
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  36187910 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaaacctccacctaacaccaaaa 36187995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 22986604 - 22986719
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccaccaacaccaaaagcaagaggacctaattctaataggcctaaa 171  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||          | ||||  ||||||| ||||||||||||  ||||||    
T  22986604 gtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagaaacc----------caaaaattaagaggaactaattctaataatcctaaa 22986693  T
Q  172 aggctaaaacaaggggacagaaaatg 197  Q
    | ||||||||||| ||||||||||||    
T  22986694 atgctaaaacaagaggacagaaaatg 22986719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 19523268 - 19523183
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  ||||||||| ||||||||| ||||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  19523268 taaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaaa 19523183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 2274944 - 2274874
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||||||| ||||||||| |||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  2274944 gtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgaggaacccccacctaacaccaaaa 2274874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 15480135 - 15480205
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||    
T  15480135 gtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaacaccaaaa 15480205  T

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Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 23284108 - 23284164
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaaccccc 128  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||    
T  23284108 gtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgaggaaccccc 23284164  T

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Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 125
Target Start/End: Original strand, 40794385 - 40794426
Alignment:
Q  84 tacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  40794385 tacaccaaaaggtgaaaatcactaccgtatacatgagaaacc 40794426  T

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Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 11242449 - 11242489
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  11242449 aacaccaaaagcaagaggacccaattctaataggcataaaa 11242489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 15639615 - 15639575
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  15639615 aacaccaaaagtaagaggacccaattctaataggcctaaaa 15639575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 34425872 - 34425832
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  34425872 aacaccaaaagcaagaggactcaattctaataggcctaaaa 34425832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 36868922 - 36868970
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    |||||||||  ||||||||||| |||||||| |||||||||||||||||    
T  36868922 gtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgag 36868970  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 31194643 - 31194705
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    |||||| |||||||||  ||||||||| ||| ||||| |||||||||| |||||||||||||||||    
T  31194643 taaatacaaggtgccg--tatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgag 31194705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 2530943 - 2530996
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||| | ||||| |||||||||||||| ||||| ||||||||||| ||||    
T  2530943 gtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacc 2530996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 10543727 - 10543682
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacat 117  Q
    ||||||||||  |||| |||||||||||||| ||||||||||||||    
T  10543727 gtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat 10543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 33037834 - 33037781
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||  |||||||||||||||||||  | ||||||||||||||| ||||    
T  33037834 gtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgaggaacc 33037781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 2024771 - 2024811
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||||||||||||  |||||||||| ||||||||    
T  2024771 aacaccaaaagcaagaggactcaattctaatatgcctaaaa 2024811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 7079601 - 7079561
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||| ||||||||||| ||||||||||||||||| ||||||    
T  7079601 aacatcaaaagcaagatgacctaattctaataggtctaaaa 7079561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 26718995 - 26719043
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||||||||  ||||| ||||||||||||| ||||||| |||||||||    
T  26718995 gtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26719043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 26988739 - 26988787
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||||||||  ||||| ||||||||||||| ||||||| |||||||||    
T  26988739 gtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26988787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 40794456 - 40794496
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||| ||||||||| |||||||||| ||||||||    
T  40794456 aacaccaaaagtaagaggacccaattctaataagcctaaaa 40794496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 3e-63; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 28 - 286
Target Start/End: Original strand, 27506740 - 27507005
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa-------tataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    |||||||||||||||||||||||||||||||       ||||||||||||  ||||||||  |||||||||||||| ||||||||||| |||||||||||    
T  27506740 aaaaagcaatgatctatttatattttttaaaagataaatataaggtgccg--tatatatgtggtacacccaaaggtaaaaatgactactgtatacatgag 27506837  T
Q  121 aaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttt 219  Q
     ||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||       |||    
T  27506838 gaactcccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggagacagaaaatggctgggggtattaaattttttt 27506937  T
Q  220 tggagggcagtagtactagtgggtatt-nnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    |||||||||||||||||| ||||||||          |||||| ||||||||||||||||||||||||    
T  27506938 tggagggcagtagtactaatgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctc 27507005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 10762599 - 10762752
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||    
T  10762599 taaatataaggtgc--ggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaatgcaagaggacct 10762696  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtatt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  10762697 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgagggtatt 10762752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 55 - 286
Target Start/End: Complemental strand, 9046097 - 9045868
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  9046097 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacaaaaagcaagaggacct 9046000  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttttggagggcagtagtactagtgggtattnnnnnnn 253  Q
    |||||||||| ||||||||| |||||||||||||||| ||||| | ||||||||||         ||||||||||||| ||||| ||||||||           
T  9045999 aattctaataagcctaaaagactaaaacaaggggacataaaatagctgggggtattaaaaaaa-attggagggcagtaatactaatgggtattaaaaaaa 9045901  T
Q  254 nnttgaggtccatgactgagggaggcccagctc 286  Q
      |||||| ||||||||||||||||||||||||    
T  9045900 aattgaggcccatgactgagggaggcccagctc 9045868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 55 - 286
Target Start/End: Complemental strand, 26716196 - 26715967
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||||    
T  26716196 taaatataaggtgcca--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacaaaaagcaagagaacct 26716099  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggggtattnnnnnnnttttggagggcagtagtactagtgggtattnnnnnnn 253  Q
    |||||||||||| ||||||| |||||||||||||||| ||||||| ||||||||||         ||| ||||||||| ||||||||||||||           
T  26716098 aattctaataggtctaaaagactaaaacaaggggacataaaatggctgggggtattaaaaaaa-attgaagggcagtaatactagtgggtattaaaaaaa 26716000  T
Q  254 nnttgaggtccatgactgagggaggcccagctc 286  Q
      |||||| ||||||||||||||||||||||||    
T  26715999 aattgaggcccatgactgagggaggcccagctc 26715967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 286
Target Start/End: Complemental strand, 24410505 - 24410272
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatga-gaaacccccacc-aacaccaaaagcaagaggacc 152  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||| ||||||||||    
T  24410505 taaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccccccacctaacaccaaaaacaagaggacc 24410408  T
Q  153 taattctaataggcctaaaaggctaaaacaa-ggggacagaaaatggttgggggtatt-nnnnnnnttttggagggcagtagtactagtgggtattnnnn 250  Q
    |||||||||| |||||||||||||||||||| ||||||||||||| | ||||||||||          |||||||| |||||||||| ||||||||        
T  24410407 taattctaattggcctaaaaggctaaaacaagggggacagaaaatagctgggggtattaaaaaaaaaattggagggtagtagtactaatgggtattaaaa 24410308  T
Q  251 nnnnnttgaggtccatgactgagggaggcccagctc 286  Q
         |||||| ||||||||||||||||||||||||    
T  24410307 aaaaattgaggcccatgactgagggaggcccagctc 24410272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 29939911 - 29940037
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||| |||||    
T  29939911 gtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccaccacctaacaccaaaagcaagaggaactaattctaatagacctaa 29940010  T
Q  171 aaggctaaaacaaggggacagaaaatg 197  Q
    |||| ||||||||| ||||||||||||    
T  29940011 aaggttaaaacaagaggacagaaaatg 29940037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 122 - 286
Target Start/End: Complemental strand, 8327669 - 8327503
Alignment:
Q  122 aacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatgg-ttgggggtattnnnnnnnttt 219  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||         |    
T  8327669 aacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctggggggtattaaaaaaaaat 8327570  T
Q  220 tggagggcagtagtactagtgggtattnnnnnnnnnttgaggtccatgactgagggaggcccagctc 286  Q
    |||||||||||||||||||||||||||         |||||| ||||||||||||||||||||||||    
T  8327569 tggagggcagtagtactagtgggtattaaaaaaaaattgaggcccatgactgagggaggcccagctc 8327503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 3155285 - 3155168
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||| | |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||    
T  3155285 taaatacaaggtgccg--tatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 3155188  T
Q  154 aattctaataggcctaaaag 173  Q
    ||||||||||  ||||||||    
T  3155187 aattctaataatcctaaaag 3155168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 4505962 - 4505845
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    |||||| |||||||||  ||||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||    
T  4505962 taaatacaaggtgccg--tatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaact 4505865  T
Q  154 aattctaataggcctaaaag 173  Q
    ||||||||||  ||||||||    
T  4505864 aattctaataatcctaaaag 4505845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 72 - 163
Target Start/End: Complemental strand, 6965060 - 6964968
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaata 163  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||||||||||||    
T  6965060 gtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaata 6964968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 8907128 - 8907230
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||  |||||||||||  |||||    
T  8907128 gtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacccccacctaacaccaaaatcaagaggaattaattctaataatcctaa 8907227  T
Q  171 aag 173  Q
    |||    
T  8907228 aag 8907230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 12337498 - 12337599
Alignment:
Q  73 tatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaa 171  Q
    ||||||||  ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||||||||||||  ||||||    
T  12337498 tatatatgtggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaa 12337597  T
Q  172 ag 173  Q
    ||    
T  12337598 ag 12337599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 3953074 - 3952989
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  |||| |||| ||||||||| |||||||||||| |||||||| |||||| |||||||||| ||||||||||    
T  3953074 taaatacaaggtgccg--tatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaacccccacctaacaccaaaa 3952989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 7162852 - 7162767
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 141  Q
    |||||| |||||||||  ||||||||| ||| || || |||||||||||||||||||||| ||||| |||||| ||| ||||||||||    
T  7162852 taaatacaaggtgccg--tatatatgcggtatactcagaggtgaaaatgactaccgtatatatgaggaacccctacctaacaccaaaa 7162767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 16097076 - 16097008
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||| |||||||||  ||||||||  |||||||||||||||||||| |||||| |||||||||| ||||    
T  16097076 taaatacaaggtgccg--tatatatgatgtacacccaaaggtgaaaattactaccttatacatgaggaacc 16097008  T

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Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 37182723 - 37182670
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    ||||||||||  |||||||||| |||||||| ||||||||||||||||| ||||    
T  37182723 gtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacc 37182670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 10252375 - 10252335
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  10252375 aacaccaaaagcaagatgacccaattctaataggcctaaaa 10252335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 24035679 - 24035719
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  24035679 aacactaaaagcaagaggacctaattctaatagacctaaaa 24035719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 29694352 - 29694312
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  29694352 aacaccaaaagcaagaggacccaattctaataggtctaaaa 29694312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 22727551 - 22727598
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatga 119  Q
    |||||||||| ||||||||||| |||||||| |||||| |||||||||    
T  22727551 gtatatatgcggtacacccaaaagtgaaaatcactaccatatacatga 22727598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 8327720 - 8327690
Alignment:
Q  28 aaaaagcaatgatctatttatattttttaaa 58  Q
    |||||||||||||||||||||||||||||||    
T  8327720 aaaaagcaatgatctatttatattttttaaa 8327690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 12134089 - 12134134
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacat 117  Q
    ||||||||||  |||||||||| |||||||| ||||||||||||||    
T  12134089 gtatatatgcgatacacccaaaagtgaaaatcactaccgtatacat 12134134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 28425759 - 28425812
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||| ||||||||||| |||||||| |||||| |||| ||||| ||||    
T  28425759 gtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgaggaacc 28425812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 11912892 - 11912932
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||||||||| ||||| |||| |||||||||||||||||||    
T  11912892 aacaccaaaatcaagatgacccaattctaataggcctaaaa 11912932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 12134174 - 12134214
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||||||||| ||  |||||||||||||||||||    
T  12134174 aacaccaaaagcaagagaactcaattctaataggcctaaaa 12134214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 37182638 - 37182598
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||| ||||||||||| |||| |||||||||||||||||||    
T  37182638 aacagcaaaagcaagatgacccaattctaataggcctaaaa 37182598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 38400766 - 38400726
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||||||||||||||| ||||  ||||||||||||||||||    
T  38400766 aacaccaaaagcaagatgaccctattctaataggcctaaaa 38400726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 38400850 - 38400798
Alignment:
Q  73 tatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||  ||||  ||||||||||||| ||||||||||||||||| ||||    
T  38400850 tatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaacc 38400798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 55 - 204
Target Start/End: Complemental strand, 106607 - 106459
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacct 153  Q
    ||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  106607 taaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacct 106510  T
Q  154 aattctaataggcctaaaaggctaaaacaaggggacagaaaatggttgggg 204  Q
    || ||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  106509 aaatctaataggcctaaaagactaaaacaaggggacataaaatggctgggg 106459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 197
Target Start/End: Complemental strand, 1397 - 1271
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 170  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||||| |||||  |||||    
T  1397 gtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattttaataatcctaa 1298  T
Q  171 aaggctaaaacaaggggacagaaaatg 197  Q
    |||| ||||||||| ||||| ||||||    
T  1297 aaggttaaaacaagaggacaaaaaatg 1271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 181969 - 181903
Alignment:
Q  76 atatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaaccccca-ccaacaccaaaa 141  Q
    |||||| ||||| ||| |||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  181969 atatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaacccccatctaacaccaaaa 181903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 206538 - 206591
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||| |||||||||| ||||||||| ||||||||||||||||| ||||    
T  206538 gtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacc 206591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 307 - 354
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatga 119  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  307 gtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatga 354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 16081 - 16028
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||| ||||| ||||| |||||| ||||||| ||||||||||||||||||||||    
T  16081 gtatgtatgcggtacatccaaagatgaaaatcactaccgtatacatgagaaacc 16028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 40052 - 40012
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  40052 aacacaaaaagcaagaggacccaattctaataggcctaaaa 40012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 138112 - 138072
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  138112 aacacaaaaagcaagaggacccaattctaataggcctaaaa 138072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 230993 - 231033
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  230993 aacaccaaaagcaagaggacccgattctaataggcctaaaa 231033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 230908 - 230956
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgag 120  Q
    ||||||||||  || |||||||||||||||| |||||| ||||||||||    
T  230908 gtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgag 230956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 1423 - 1355
Alignment:
Q  55 taaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    |||||||||||||| |  |||||||||  |||||||||| |||||||| |||| |||||||||||| ||||    
T  1423 taaatataaggtgctg--tatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 1355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 1325 - 1285
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    ||||||||||| ||||||||| |||||||| ||||||||||    
T  1325 aacaccaaaagtaagaggacccaattctaacaggcctaaaa 1285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 173559 - 173612
Alignment:
Q  72 gtatatatgccgtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 125  Q
    ||||||||||  ||||||||||||| ||||| |||||||||||| |||| ||||    
T  173559 gtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacc 173612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 173644 - 173684
Alignment:
Q  132 aacaccaaaagcaagaggacctaattctaataggcctaaaa 172  Q
    |||||||||||||||||| |  |||||||||||||||||||    
T  173644 aacaccaaaagcaagaggtctcaattctaataggcctaaaa 173684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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