View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13760_low_22 (Length: 209)

Name: NF13760_low_22
Description: NF13760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13760_low_22
NF13760_low_22
[»] chr4 (61 HSPs)
chr4 (16-135)||(11120717-11120835)
chr4 (153-209)||(48226497-48226553)
chr4 (172-209)||(2186351-2186388)
chr4 (172-209)||(10497265-10497302)
chr4 (172-209)||(11949781-11949818)
chr4 (172-209)||(16304116-16304153)
chr4 (172-209)||(19588160-19588197)
chr4 (172-209)||(19854571-19854608)
chr4 (172-209)||(20383494-20383531)
chr4 (172-205)||(27537758-27537791)
chr4 (172-209)||(28435266-28435303)
chr4 (172-209)||(39093593-39093630)
chr4 (172-209)||(52270048-52270085)
chr4 (172-209)||(56497626-56497663)
chr4 (153-209)||(8494993-8495049)
chr4 (172-208)||(16470311-16470347)
chr4 (175-209)||(2587721-2587755)
chr4 (175-209)||(8734856-8734890)
chr4 (175-209)||(10204846-10204880)
chr4 (147-205)||(21318246-21318304)
chr4 (175-209)||(45837140-45837174)
chr4 (172-209)||(675924-675961)
chr4 (172-209)||(1332910-1332947)
chr4 (172-209)||(2649751-2649788)
chr4 (172-209)||(3936633-3936670)
chr4 (172-209)||(7230286-7230323)
chr4 (172-209)||(9946433-9946470)
chr4 (172-209)||(12192509-12192546)
chr4 (172-209)||(12322679-12322716)
chr4 (172-205)||(13276139-13276172)
chr4 (172-209)||(14577525-14577562)
chr4 (172-209)||(16431622-16431659)
chr4 (172-209)||(16584967-16585004)
chr4 (172-209)||(20799412-20799449)
chr4 (172-209)||(22040656-22040693)
chr4 (172-209)||(22279538-22279575)
chr4 (175-208)||(22411771-22411804)
chr4 (172-209)||(23809955-23809992)
chr4 (172-209)||(24665009-24665046)
chr4 (172-205)||(25101408-25101441)
chr4 (176-209)||(28568211-28568244)
chr4 (172-209)||(34247446-34247483)
chr4 (147-200)||(36490583-36490636)
chr4 (172-209)||(38453271-38453308)
chr4 (172-205)||(43034360-43034393)
chr4 (172-209)||(46676516-46676553)
chr4 (172-209)||(49949340-49949377)
chr4 (172-209)||(50362157-50362194)
chr4 (172-209)||(53190301-53190338)
chr4 (140-209)||(54877585-54877654)
chr4 (172-209)||(55421587-55421624)
chr4 (172-209)||(55924805-55924842)
chr4 (172-209)||(56088091-56088128)
chr4 (172-209)||(56551610-56551647)
chr4 (172-209)||(56565001-56565038)
chr4 (172-208)||(8020665-8020701)
chr4 (140-192)||(16737094-16737146)
chr4 (173-205)||(38297952-38297984)
chr4 (172-200)||(44221462-44221490)
chr4 (152-192)||(48283325-48283365)
chr4 (172-208)||(52132320-52132356)
[»] chr2 (63 HSPs)
chr2 (154-209)||(7350552-7350607)
chr2 (172-209)||(20455897-20455934)
chr2 (175-209)||(28202412-28202446)
chr2 (172-209)||(9383227-9383264)
chr2 (172-209)||(9519732-9519769)
chr2 (172-209)||(11560504-11560541)
chr2 (176-209)||(23984010-23984043)
chr2 (172-209)||(25598580-25598617)
chr2 (172-209)||(29544633-29544670)
chr2 (172-209)||(30978368-30978405)
chr2 (172-209)||(34464427-34464464)
chr2 (140-200)||(660808-660868)
chr2 (172-207)||(833087-833122)
chr2 (157-200)||(11175800-11175843)
chr2 (151-198)||(22354940-22354987)
chr2 (175-209)||(15770796-15770830)
chr2 (147-209)||(20565068-20565130)
chr2 (147-209)||(29133477-29133539)
chr2 (172-205)||(961113-961146)
chr2 (172-205)||(2256981-2257014)
chr2 (172-209)||(3197097-3197134)
chr2 (172-209)||(4122031-4122068)
chr2 (172-209)||(4137997-4138034)
chr2 (172-209)||(8781668-8781705)
chr2 (172-209)||(12124551-12124588)
chr2 (172-209)||(12124690-12124727)
chr2 (172-205)||(15462887-15462920)
chr2 (172-209)||(15503135-15503172)
chr2 (172-209)||(16877130-16877167)
chr2 (172-209)||(16989261-16989298)
chr2 (172-209)||(18231491-18231528)
chr2 (140-193)||(18693648-18693701)
chr2 (172-209)||(19179068-19179105)
chr2 (172-209)||(20120739-20120776)
chr2 (172-209)||(22523030-22523067)
chr2 (172-209)||(24592864-24592901)
chr2 (172-209)||(24593382-24593419)
chr2 (172-209)||(25186260-25186297)
chr2 (148-209)||(27244663-27244724)
chr2 (172-209)||(28771588-28771625)
chr2 (172-209)||(29734697-29734734)
chr2 (176-209)||(30045459-30045492)
chr2 (176-209)||(30050622-30050655)
chr2 (176-209)||(30141666-30141699)
chr2 (171-208)||(31963083-31963120)
chr2 (172-209)||(32204550-32204587)
chr2 (172-209)||(33063992-33064029)
chr2 (172-205)||(34977214-34977247)
chr2 (172-209)||(35685079-35685116)
chr2 (172-209)||(40099401-40099438)
chr2 (175-204)||(41543004-41543033)
chr2 (172-209)||(41668661-41668698)
chr2 (172-209)||(42066718-42066755)
chr2 (172-209)||(43117208-43117245)
chr2 (172-209)||(44526134-44526171)
chr2 (176-208)||(7304783-7304815)
chr2 (173-205)||(8257073-8257105)
chr2 (157-209)||(10195665-10195717)
chr2 (173-205)||(12353666-12353698)
chr2 (165-205)||(18324905-18324945)
chr2 (153-209)||(34191307-34191363)
chr2 (172-204)||(36264497-36264529)
chr2 (173-209)||(41763897-41763933)
[»] scaffold0334 (1 HSPs)
scaffold0334 (147-209)||(5188-5250)
[»] chr6 (31 HSPs)
chr6 (147-209)||(7082985-7083047)
chr6 (140-209)||(20744144-20744213)
chr6 (147-209)||(17935735-17935797)
chr6 (147-205)||(32524413-32524471)
chr6 (172-205)||(8569719-8569752)
chr6 (172-205)||(8629714-8629747)
chr6 (172-209)||(21373424-21373461)
chr6 (172-209)||(26400870-26400907)
chr6 (172-209)||(29740488-29740525)
chr6 (172-209)||(32053794-32053831)
chr6 (173-209)||(13376318-13376354)
chr6 (147-209)||(4455589-4455651)
chr6 (173-207)||(8575595-8575629)
chr6 (175-209)||(10053256-10053290)
chr6 (167-205)||(10278463-10278501)
chr6 (172-209)||(655767-655804)
chr6 (172-205)||(2726435-2726468)
chr6 (172-209)||(9333737-9333774)
chr6 (172-205)||(9977067-9977100)
chr6 (172-209)||(10780125-10780162)
chr6 (172-209)||(11982557-11982594)
chr6 (140-209)||(14918286-14918355)
chr6 (172-209)||(17382090-17382127)
chr6 (172-209)||(23629855-23629892)
chr6 (172-209)||(26320581-26320618)
chr6 (148-193)||(28758794-28758839)
chr6 (172-209)||(33938697-33938734)
chr6 (153-189)||(12009-12045)
chr6 (173-205)||(361764-361796)
chr6 (173-209)||(6631169-6631205)
chr6 (172-200)||(28318042-28318070)
[»] chr3 (52 HSPs)
chr3 (140-208)||(37364415-37364483)
chr3 (172-209)||(977959-977996)
chr3 (172-209)||(10498713-10498750)
chr3 (172-209)||(12746375-12746412)
chr3 (172-209)||(24428491-24428528)
chr3 (172-209)||(25441518-25441555)
chr3 (172-209)||(29631192-29631229)
chr3 (172-209)||(53996305-53996342)
chr3 (173-209)||(10308473-10308509)
chr3 (157-205)||(51882203-51882251)
chr3 (150-205)||(17588372-17588427)
chr3 (146-209)||(33745105-33745168)
chr3 (171-209)||(52904160-52904198)
chr3 (172-209)||(1149087-1149124)
chr3 (172-209)||(7974530-7974567)
chr3 (172-209)||(8113580-8113617)
chr3 (172-209)||(9321423-9321460)
chr3 (172-209)||(10926475-10926512)
chr3 (172-209)||(14827531-14827568)
chr3 (172-209)||(16980372-16980409)
chr3 (172-209)||(18870743-18870780)
chr3 (172-205)||(19468461-19468494)
chr3 (172-209)||(21331435-21331472)
chr3 (172-209)||(21506776-21506813)
chr3 (172-209)||(25340942-25340979)
chr3 (172-209)||(30229544-30229581)
chr3 (172-209)||(32629086-32629123)
chr3 (176-209)||(33224690-33224723)
chr3 (171-200)||(34326000-34326029)
chr3 (172-209)||(35191835-35191872)
chr3 (152-209)||(36431815-36431872)
chr3 (172-205)||(38130977-38131010)
chr3 (172-209)||(40575627-40575664)
chr3 (172-209)||(43490435-43490472)
chr3 (172-209)||(44579642-44579679)
chr3 (172-209)||(45431954-45431991)
chr3 (172-205)||(46226095-46226128)
chr3 (172-209)||(46483253-46483290)
chr3 (140-209)||(48315010-48315079)
chr3 (172-209)||(50037317-50037354)
chr3 (172-209)||(50570207-50570244)
chr3 (172-205)||(51061066-51061099)
chr3 (172-209)||(52119382-52119419)
chr3 (172-209)||(53162204-53162241)
chr3 (172-209)||(54230117-54230154)
chr3 (175-208)||(55494696-55494729)
chr3 (172-200)||(8139730-8139758)
chr3 (172-200)||(28093369-28093397)
chr3 (173-209)||(32836179-32836215)
chr3 (153-205)||(35126268-35126320)
chr3 (172-200)||(39779039-39779067)
chr3 (157-197)||(52172790-52172830)
[»] scaffold0059 (1 HSPs)
scaffold0059 (172-207)||(64267-64302)
[»] chr1 (44 HSPs)
chr1 (174-209)||(12783721-12783756)
chr1 (154-209)||(25086489-25086544)
chr1 (172-209)||(3509959-3509996)
chr1 (172-209)||(8253745-8253782)
chr1 (172-209)||(26803469-26803506)
chr1 (172-209)||(34521208-34521245)
chr1 (172-209)||(42045390-42045427)
chr1 (172-209)||(45140024-45140061)
chr1 (140-200)||(16580785-16580845)
chr1 (157-209)||(26644036-26644088)
chr1 (137-205)||(32560983-32561051)
chr1 (153-200)||(4302467-4302514)
chr1 (175-205)||(25165113-25165143)
chr1 (171-205)||(29935993-29936027)
chr1 (171-205)||(37705135-37705169)
chr1 (172-209)||(124462-124499)
chr1 (172-209)||(1794602-1794639)
chr1 (157-198)||(5279373-5279414)
chr1 (172-209)||(14520950-14520987)
chr1 (175-208)||(15602198-15602231)
chr1 (172-209)||(15854106-15854143)
chr1 (172-209)||(17283957-17283994)
chr1 (172-209)||(18166608-18166645)
chr1 (172-209)||(21400041-21400078)
chr1 (172-209)||(21638119-21638156)
chr1 (172-209)||(25532979-25533016)
chr1 (172-209)||(32944742-32944779)
chr1 (172-209)||(33020061-33020098)
chr1 (172-209)||(34733406-34733443)
chr1 (172-209)||(35473958-35473995)
chr1 (147-204)||(36467018-36467075)
chr1 (172-209)||(38448884-38448921)
chr1 (176-209)||(40938486-40938519)
chr1 (172-209)||(42888581-42888618)
chr1 (172-209)||(44641533-44641570)
chr1 (172-209)||(45190287-45190324)
chr1 (172-209)||(48100728-48100765)
chr1 (172-209)||(48681951-48681988)
chr1 (172-209)||(50595901-50595938)
chr1 (172-209)||(50638934-50638971)
chr1 (140-209)||(51031881-51031950)
chr1 (172-209)||(52441529-52441566)
chr1 (181-209)||(6567716-6567744)
chr1 (173-205)||(10356202-10356234)
[»] scaffold0122 (1 HSPs)
scaffold0122 (167-209)||(31168-31210)
[»] chr7 (47 HSPs)
chr7 (167-209)||(48980493-48980535)
chr7 (172-209)||(10244733-10244770)
chr7 (172-209)||(21286356-21286393)
chr7 (172-209)||(38374209-38374246)
chr7 (172-209)||(39801712-39801749)
chr7 (172-209)||(44558792-44558829)
chr7 (140-200)||(7735545-7735605)
chr7 (172-208)||(27462454-27462490)
chr7 (167-209)||(8683076-8683118)
chr7 (175-209)||(20205828-20205862)
chr7 (147-209)||(30857254-30857316)
chr7 (175-209)||(43346585-43346619)
chr7 (172-209)||(3953447-3953484)
chr7 (172-209)||(4340133-4340170)
chr7 (176-209)||(5526731-5526764)
chr7 (172-209)||(7872766-7872803)
chr7 (172-209)||(8615029-8615066)
chr7 (140-205)||(8901381-8901446)
chr7 (172-209)||(9522918-9522955)
chr7 (172-209)||(18714454-18714491)
chr7 (172-209)||(19416520-19416557)
chr7 (172-205)||(19599155-19599188)
chr7 (172-209)||(21050240-21050277)
chr7 (176-209)||(21099795-21099828)
chr7 (172-209)||(21105609-21105646)
chr7 (172-205)||(22991409-22991442)
chr7 (172-205)||(23413064-23413097)
chr7 (172-209)||(24991787-24991824)
chr7 (172-205)||(27263351-27263384)
chr7 (172-205)||(27270245-27270278)
chr7 (176-209)||(34891795-34891828)
chr7 (172-209)||(35142167-35142204)
chr7 (172-205)||(37624553-37624586)
chr7 (176-209)||(38841993-38842026)
chr7 (172-209)||(41527566-41527603)
chr7 (176-209)||(42043088-42043121)
chr7 (172-205)||(45088886-45088919)
chr7 (140-209)||(46207766-46207834)
chr7 (172-209)||(46987092-46987129)
chr7 (172-209)||(47342683-47342720)
chr7 (172-205)||(48065212-48065245)
chr7 (172-205)||(48837877-48837910)
chr7 (173-209)||(4346667-4346703)
chr7 (172-200)||(5041354-5041382)
chr7 (169-209)||(5833048-5833088)
chr7 (172-208)||(6528823-6528859)
chr7 (173-209)||(40200974-40201010)
[»] chr5 (48 HSPs)
chr5 (147-209)||(15889417-15889479)
chr5 (172-209)||(37932336-37932373)
chr5 (172-209)||(40715967-40716004)
chr5 (172-209)||(40959008-40959045)
chr5 (172-209)||(42505878-42505915)
chr5 (157-205)||(3389172-3389220)
chr5 (154-209)||(19248485-19248540)
chr5 (171-209)||(5485192-5485230)
chr5 (171-209)||(8902793-8902831)
chr5 (172-206)||(12611053-12611087)
chr5 (175-209)||(16188830-16188864)
chr5 (175-209)||(16188932-16188966)
chr5 (151-209)||(20927645-20927703)
chr5 (175-209)||(26409259-26409293)
chr5 (171-209)||(39610358-39610396)
chr5 (175-209)||(39804477-39804511)
chr5 (175-205)||(40175663-40175693)
chr5 (172-205)||(5246174-5246207)
chr5 (172-209)||(5846035-5846072)
chr5 (172-209)||(6327702-6327739)
chr5 (172-209)||(6489013-6489050)
chr5 (172-209)||(6624782-6624819)
chr5 (176-209)||(10199025-10199058)
chr5 (172-209)||(10704349-10704386)
chr5 (172-209)||(11844456-11844493)
chr5 (168-209)||(14188349-14188390)
chr5 (172-209)||(16133083-16133120)
chr5 (172-205)||(17046344-17046377)
chr5 (172-209)||(17861985-17862022)
chr5 (172-209)||(18331713-18331750)
chr5 (172-209)||(18489094-18489131)
chr5 (172-209)||(19068457-19068494)
chr5 (172-209)||(19759935-19759972)
chr5 (172-209)||(20688046-20688083)
chr5 (172-209)||(22522819-22522856)
chr5 (172-209)||(24485705-24485742)
chr5 (172-209)||(28207138-28207175)
chr5 (172-209)||(31602843-31602880)
chr5 (172-205)||(31877938-31877971)
chr5 (172-209)||(34436857-34436894)
chr5 (172-209)||(36321512-36321549)
chr5 (172-205)||(39914911-39914944)
chr5 (172-205)||(41650957-41650990)
chr5 (154-202)||(15906513-15906561)
chr5 (145-209)||(24408501-24408565)
chr5 (175-207)||(26655472-26655504)
chr5 (175-207)||(26927057-26927089)
chr5 (147-207)||(37021365-37021425)
[»] scaffold0118 (1 HSPs)
scaffold0118 (172-209)||(40004-40041)
[»] scaffold0025 (1 HSPs)
scaffold0025 (172-209)||(64224-64261)
[»] chr8 (42 HSPs)
chr8 (172-205)||(56822-56855)
chr8 (172-209)||(444419-444456)
chr8 (172-209)||(8148445-8148482)
chr8 (172-209)||(8717493-8717530)
chr8 (172-209)||(12910824-12910861)
chr8 (172-209)||(29499777-29499814)
chr8 (172-209)||(30427737-30427774)
chr8 (137-209)||(7996946-7997018)
chr8 (147-209)||(37117517-37117579)
chr8 (172-205)||(498741-498774)
chr8 (172-205)||(6447199-6447232)
chr8 (172-209)||(8137941-8137978)
chr8 (172-209)||(11708992-11709029)
chr8 (172-209)||(13286137-13286174)
chr8 (172-205)||(13357459-13357492)
chr8 (172-209)||(15438459-15438496)
chr8 (172-209)||(15529763-15529800)
chr8 (172-209)||(17704019-17704056)
chr8 (172-209)||(19163554-19163591)
chr8 (172-209)||(19778071-19778108)
chr8 (172-209)||(23852917-23852954)
chr8 (172-209)||(27718912-27718949)
chr8 (172-209)||(30623299-30623336)
chr8 (172-209)||(32051550-32051587)
chr8 (172-209)||(32192900-32192937)
chr8 (172-209)||(33451367-33451404)
chr8 (172-205)||(34420880-34420913)
chr8 (172-209)||(37938501-37938538)
chr8 (172-209)||(39821890-39821927)
chr8 (175-208)||(40401600-40401633)
chr8 (140-209)||(41625200-41625269)
chr8 (172-209)||(42208487-42208524)
chr8 (172-200)||(4830023-4830051)
chr8 (173-209)||(8402361-8402397)
chr8 (172-200)||(10601778-10601806)
chr8 (140-208)||(11479623-11479691)
chr8 (172-200)||(12748916-12748944)
chr8 (157-205)||(24023815-24023863)
chr8 (172-208)||(29908018-29908054)
chr8 (172-208)||(34968562-34968598)
chr8 (172-200)||(37141372-37141400)
chr8 (172-208)||(38763533-38763569)
[»] scaffold0008 (2 HSPs)
scaffold0008 (172-207)||(122190-122225)
scaffold0008 (172-205)||(122901-122934)
[»] scaffold1379 (1 HSPs)
scaffold1379 (172-209)||(1642-1679)
[»] scaffold0735 (1 HSPs)
scaffold0735 (172-209)||(1534-1571)
[»] scaffold0533 (1 HSPs)
scaffold0533 (172-205)||(8869-8902)
[»] scaffold0180 (1 HSPs)
scaffold0180 (172-209)||(17738-17775)
[»] scaffold0098 (1 HSPs)
scaffold0098 (140-209)||(5431-5499)
[»] scaffold0040 (1 HSPs)
scaffold0040 (172-209)||(56790-56827)
[»] scaffold0031 (1 HSPs)
scaffold0031 (172-209)||(47259-47296)
[»] scaffold0011 (1 HSPs)
scaffold0011 (172-209)||(185269-185306)
[»] scaffold0005 (1 HSPs)
scaffold0005 (172-209)||(239813-239850)
[»] scaffold0567 (1 HSPs)
scaffold0567 (172-200)||(7557-7585)
[»] scaffold0038 (1 HSPs)
scaffold0038 (172-200)||(109148-109176)


Alignment Details
Target: chr4 (Bit Score: 100; Significance: 1e-49; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 11120717 - 11120835
Alignment:
Q  16 taaggaacacaacgtatatatttatagcacaaattttcaaaggcaaactttaattttgatggtctctgcttagtgaatgggaaattaaattctttaaagg 115  Q
    |||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11120717 taaggaacacaa-gaaaatatttatagcacaaattttcaaaggcaaactttaattttgatggtctctgcttagtgaatgggaaattaaattctttaaagg 11120815  T
Q  116 tggtgagtcaaattagtagc 135  Q
    ||||||||||| ||||||||    
T  11120816 tggtgagtcaagttagtagc 11120835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 48226497 - 48226553
Alignment:
Q  153 gggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||| | |||  |||||||| |||||||||||||||||||||||||||||    
T  48226497 gggatttgaaccccagaccttgcatattttatgcattgtccataccaattgagctaa 48226553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 2186351 - 2186388
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  2186351 ttgcatatattatgcattgtccataccaactgagctaa 2186388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 10497302 - 10497265
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||||||||||||    
T  10497302 ttgcatattttatgcattgtccataccaattgagctaa 10497265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 11949781 - 11949818
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  11949781 ttgcatatattatgcattgtccataccaactgagctaa 11949818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 16304116 - 16304153
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  16304116 ttgcatatattatgcattgtccataccaactgagctaa 16304153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 19588197 - 19588160
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||||||||||||    
T  19588197 ttgcatattttatgcattgtccataccaattgagctaa 19588160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 19854608 - 19854571
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  19854608 ttgcatatattatgcattgtccataccaactgagctaa 19854571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 20383531 - 20383494
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  20383531 ttgcatatattatgcattgtccataccaactgagctaa 20383494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 27537791 - 27537758
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||||||||    
T  27537791 ttgcatatattatgcattgtccataccaattgag 27537758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 28435266 - 28435303
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  28435266 ttgcatatattatgcattgtccataccaactgagctaa 28435303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 39093593 - 39093630
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||||||||||||    
T  39093593 ttgcatatattatgcattgtccttaccaattgagctaa 39093630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 52270048 - 52270085
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  52270048 ttgcatatattatgcattgtccataccaactgagctaa 52270085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 56497626 - 56497663
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||||||||||||    
T  56497626 ttgcatatattatgcattgtccttaccaattgagctaa 56497663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 8495049 - 8494993
Alignment:
Q  153 gggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||| |  ||| |||||||||||||||||||||| |||||| ||||||||    
T  8495049 gggatttgaactcgggatcttgcatatattatgcattgtccctaccaactgagctaa 8494993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 16470347 - 16470311
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagcta 208  Q
    |||||||| ||||||||||||||||||||||||||||    
T  16470347 ttgcatattttatgcattgtccataccaattgagcta 16470311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 2587721 - 2587755
Alignment:
Q  175 catatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||| |||||||||||||||||||    
T  2587721 catatattatgcattatccataccaattgagctaa 2587755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 8734890 - 8734856
Alignment:
Q  175 catatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||| |||||||||||    
T  8734890 catatattatgcattgtccatactaattgagctaa 8734856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 10204880 - 10204846
Alignment:
Q  175 catatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||| ||||||||    
T  10204880 catatattatgcattgtccataccaactgagctaa 10204846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 21318246 - 21318304
Alignment:
Q  147 gtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgag 205  Q
    ||||| ||| ||||||| |||||  |||||||||||||||||||||| |||||| ||||    
T  21318246 gtggtcggggtttgaaccctagaccttgcatatattatgcattgtccctaccaactgag 21318304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 45837140 - 45837174
Alignment:
Q  175 catatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||| ||||||||    
T  45837140 catatattatgcattgtccataccaactgagctaa 45837174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 675961 - 675924
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  675961 ttgcatatattatgcattgtccaaaccaactgagctaa 675924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 1332947 - 1332910
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  1332947 ttgcatatattatgcaatgtccctaccaattgagctaa 1332910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 2649751 - 2649788
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  2649751 ttgcatatattatgcattgtccctaccaactgagctaa 2649788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 3936670 - 3936633
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  3936670 ttgcatatattatgcattgttcataccaactgagctaa 3936633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 7230323 - 7230286
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  7230323 ttgcatatattatgcattgtccttaccaactgagctaa 7230286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 9946470 - 9946433
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  9946470 ttgcatattttatgcattgtccataccaactgagctaa 9946433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 12192509 - 12192546
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  12192509 ttgcatatattatgcattgttcataccaattgaactaa 12192546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 12322716 - 12322679
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  12322716 ttgcatatattatgcattgtccgtaccaactgagctaa 12322679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 13276172 - 13276139
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    |||||||||||||||||||||| |||||||||||    
T  13276172 ttgcatatattatgcattgtccctaccaattgag 13276139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 14577525 - 14577562
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  14577525 ttgcatatattatgcattgtccttaccaactgagctaa 14577562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 16431659 - 16431622
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  16431659 ttgcatattttatgcattgtccataccaactgagctaa 16431622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 16584967 - 16585004
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  16584967 ttgcatattttatgcattgtccatatcaattgagctaa 16585004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 20799412 - 20799449
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  20799412 ttgcatatattatgcattgtccctaccaactgagctaa 20799449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 22040693 - 22040656
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  22040693 ttgcatatattatgcattgtccatatcaactgagctaa 22040656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 22279538 - 22279575
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  22279538 ttgcatatattatgcattgtccttaccaactgagctaa 22279575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 22411804 - 22411771
Alignment:
Q  175 catatattatgcattgtccataccaattgagcta 208  Q
    |||||||||||||||||||||||||| |||||||    
T  22411804 catatattatgcattgtccataccaactgagcta 22411771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 23809992 - 23809955
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  23809992 ttgcatatattatgctttgtccataccaactgagctaa 23809955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 24665009 - 24665046
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  24665009 ttgcatatattatgcattctccataccaactgagctaa 24665046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 25101408 - 25101441
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    |||||||| |||||||||||||||||||||||||    
T  25101408 ttgcatattttatgcattgtccataccaattgag 25101441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 28568244 - 28568211
Alignment:
Q  176 atatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||| |||||||||||||||||    
T  28568244 atatattatgcattgttcataccaattgagctaa 28568211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 34247483 - 34247446
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  34247483 ttgcatatattatgcattgtccttaccaactgagctaa 34247446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 36490636 - 36490583
Alignment:
Q  147 gtggttgggatttgaacactagatattgcatatattatgcattgtccataccaa 200  Q
    ||||| ||||||||||| |  ||| ||||||| |||||||||||||||||||||    
T  36490636 gtggtcgggatttgaaccccggatcttgcatacattatgcattgtccataccaa 36490583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 38453308 - 38453271
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  38453308 ttgcatatattatgcattgtccatgccaactgagctaa 38453271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 43034360 - 43034393
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  43034360 ttgcatatattatgcattgtccataccaactgag 43034393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 46676516 - 46676553
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  46676516 ttgcatatattatgcattgtccttaccaactgagctaa 46676553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 49949377 - 49949340
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  49949377 ttgcatatattatgcattgtccttaccaactgagctaa 49949340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 50362157 - 50362194
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  50362157 ttgcatatattatgcattgtccctaccaactgagctaa 50362194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 53190338 - 53190301
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  53190338 ttgcatatattatgcattatccataccaactgagctaa 53190301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 54877585 - 54877654
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||| ||||  ||| ||||||  |||||| |||||||||||||||||||| ||||||||  |||||||    
T  54877585 ttttttggtggccgggttttgaatcctagatcttgcatatattatgcattgttcataccaaccgagctaa 54877654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 55421587 - 55421624
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  55421587 ttgcatatattatgcattgtccaaaccaactgagctaa 55421624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 55924805 - 55924842
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  55924805 ttgcatatattatgtattgtccttaccaattgagctaa 55924842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 56088091 - 56088128
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  56088091 ttgcatatattatgtattgtccttaccaattgagctaa 56088128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 56551610 - 56551647
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  56551610 ttgcatatattatgcattgtccttaccaactgagctaa 56551647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 56565001 - 56565038
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  56565001 ttgcatattttatgcattgtccatatcaattgagctaa 56565038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 8020665 - 8020701
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagcta 208  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  8020665 ttgcatatattatgcattgtccaaaccaactgagcta 8020701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 16737146 - 16737094
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtc 192  Q
    |||| ||||||||||||||||||| |  ||  |||||||||||||||||||||    
T  16737146 ttttgtagtggttgggatttgaacccccgaccttgcatatattatgcattgtc 16737094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 38297984 - 38297952
Alignment:
Q  173 tgcatatattatgcattgtccataccaattgag 205  Q
    |||||||||||||||||||||||| ||||||||    
T  38297984 tgcatatattatgcattgtccatatcaattgag 38297952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 44221490 - 44221462
Alignment:
Q  172 ttgcatatattatgcattgtccataccaa 200  Q
    |||||||||||||||||||||||||||||    
T  44221490 ttgcatatattatgcattgtccataccaa 44221462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 48283325 - 48283365
Alignment:
Q  152 tgggatttgaacactagatattgcatatattatgcattgtc 192  Q
    |||||||||||| |||||  |||||||||||||||||||||    
T  48283325 tgggatttgaaccctagaacttgcatatattatgcattgtc 48283365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 52132320 - 52132356
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagcta 208  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  52132320 ttgcatatattatgcattgtccaaaccaactgagcta 52132356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 7350607 - 7350552
Alignment:
Q  154 ggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||    
T  7350607 ggatttgaaccctagactttgcatatattatgcattgtccataccaactgagctaa 7350552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 20455934 - 20455897
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20455934 ttgcatatattatgcattgtccataccaattgagctaa 20455897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 28202446 - 28202412
Alignment:
Q  175 catatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||||||||||||    
T  28202446 catatattatgcattgtccataccaattgagctaa 28202412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 9383227 - 9383264
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  9383227 ttgcatatattatgcattgtccataccaactgagctaa 9383264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 9519732 - 9519769
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  9519732 ttgcatatattatgcattgtccatatcaattgagctaa 9519769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 11560541 - 11560504
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||||||||||||    
T  11560541 ttgcatatattatgcattgtccctaccaattgagctaa 11560504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 23984043 - 23984010
Alignment:
Q  176 atatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||||||||    
T  23984043 atatattatgcattgtccataccaattgagctaa 23984010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 25598580 - 25598617
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  25598580 ttgcatatattatgcattgtccataccaactgagctaa 25598617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 29544670 - 29544633
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||||||||||||    
T  29544670 ttgcatatattatgcattgtccctaccaattgagctaa 29544633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 30978405 - 30978368
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||| |||||||||||||||||||    
T  30978405 ttgcatatattatgcattatccataccaattgagctaa 30978368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 34464427 - 34464464
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  34464427 ttgcatatattatgcattgtccataccaactgagctaa 34464464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 660808 - 660868
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaa 200  Q
    |||||| ||||| ||| ||||||| || ||  |||||||||||||||||||||||||||||    
T  660808 ttttttggtggtcggggtttgaaccctggaccttgcatatattatgcattgtccataccaa 660868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 833087 - 833122
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagct 207  Q
    ||||||||||||||||||||||||||||| ||||||    
T  833087 ttgcatatattatgcattgtccataccaactgagct 833122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 11175843 - 11175800
Alignment:
Q  157 tttgaacactagatattgcatatattatgcattgtccataccaa 200  Q
    ||||||| | |||| |||||||||||||||||||||||||||||    
T  11175843 tttgaaccccagatcttgcatatattatgcattgtccataccaa 11175800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 22354940 - 22354987
Alignment:
Q  151 ttgggatttgaacactagatattgcatatattatgcattgtccatacc 198  Q
    ||||| ||||||||| |||| |||||||||||||||||||||| ||||    
T  22354940 ttggggtttgaacaccagatcttgcatatattatgcattgtccttacc 22354987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 15770830 - 15770796
Alignment:
Q  175 catatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||||||| ||||    
T  15770830 catatattatgcattgtccataccaattgaactaa 15770796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 20565068 - 20565130
Alignment:
Q  147 gtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||| ||||||| |  ||  |||||||||||||||||||||| |||||| ||||||||    
T  20565068 gtggttggggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaa 20565130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 29133477 - 29133539
Alignment:
Q  147 gtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||| ||| || |||| |||||| |||||||| ||||||||||| |||||||| ||||||||    
T  29133477 gtggtcggggttcgaaccctagatcttgcatattttatgcattgttcataccaactgagctaa 29133539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 961146 - 961113
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    |||||||||||||||||||||| |||||||||||    
T  961146 ttgcatatattatgcattgtccctaccaattgag 961113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 2257014 - 2256981
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  2257014 ttgcatatattatgcattgtccataccaactgag 2256981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 3197097 - 3197134
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  3197097 ttgcatatattatgcattgtccctaccaactgagctaa 3197134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 4122031 - 4122068
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  4122031 ttgcatatattatgcattgtccataccagctgagctaa 4122068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 4138034 - 4137997
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  4138034 ttgcatatattatacattgtccttaccaattgagctaa 4137997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 8781668 - 8781705
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  8781668 ttgcatacattatgcattgtccataccaactgagctaa 8781705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 12124588 - 12124551
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  12124588 ttgcatatattatgcattgtccttaccaactgagctaa 12124551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 12124727 - 12124690
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  12124727 ttgcatatattatgcattgtccttaccaactgagctaa 12124690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 15462920 - 15462887
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  15462920 ttgcatatattatgcattgtccataccaactgag 15462887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 15503172 - 15503135
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  15503172 ttgcataaattacgcattgtccataccaattgagctaa 15503135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 16877167 - 16877130
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  16877167 ttgcatatattatgcattgtccataccagctgagctaa 16877130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 16989298 - 16989261
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  16989298 ttgcatatattatgcattgtccataccagctgagctaa 16989261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 18231491 - 18231528
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  18231491 ttgcatatattatgcattgtccttaccaactgagctaa 18231528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 18693648 - 18693701
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtcc 193  Q
    |||||| ||||| ||| ||||||| || ||| ||||||||||||||||||||||    
T  18693648 tttttttgtggtcggggtttgaaccctggatcttgcatatattatgcattgtcc 18693701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 19179068 - 19179105
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  19179068 ttgcatatattatgcattgtccttaccaactgagctaa 19179105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 20120739 - 20120776
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  20120739 ttgcatatattatgcattgtccttaccaactgagctaa 20120776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 22523030 - 22523067
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  22523030 ttgcatatattatgtattgtccataccaactgagctaa 22523067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 24592864 - 24592901
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  24592864 ttgcatatattatgcattgtccctaccaactgagctaa 24592901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 24593419 - 24593382
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  24593419 ttgcatatattatgcattgtccttaccaactgagctaa 24593382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 25186260 - 25186297
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  25186260 ttgcatatattatgcattgtccatatcaactgagctaa 25186297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 27244724 - 27244663
Alignment:
Q  148 tggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||| ||| ||||||| |||||  |||||||||||||||||||||| || ||| ||||||||    
T  27244724 tggtcgggctttgaaccctagaccttgcatatattatgcattgtccctatcaactgagctaa 27244663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 28771625 - 28771588
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  28771625 ttgcatatattatgcattgtccttaccaactgagctaa 28771588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 29734734 - 29734697
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  29734734 ttgcatatattatgcattgtccatatcaactgagctaa 29734697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 30045492 - 30045459
Alignment:
Q  176 atatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||| |||||||||||||||    
T  30045492 atatattatgcattgtccctaccaattgagctaa 30045459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 30050655 - 30050622
Alignment:
Q  176 atatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||| |||||||||||||||    
T  30050655 atatattatgcattgtccctaccaattgagctaa 30050622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 30141699 - 30141666
Alignment:
Q  176 atatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||| |||||||||||||||    
T  30141699 atatattatgcattgtccctaccaattgagctaa 30141666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 31963083 - 31963120
Alignment:
Q  171 attgcatatattatgcattgtccataccaattgagcta 208  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  31963083 attgcatatattatgcattgtccttaccaactgagcta 31963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 32204587 - 32204550
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  32204587 ttgcatatattatgcattgttcatgccaattgagctaa 32204550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 33064029 - 33063992
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  33064029 ttgcatatattatgcattgtccatatcaactgagctaa 33063992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 34977247 - 34977214
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  34977247 ttgcatatattatgcattgtccataccaactgag 34977214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 35685079 - 35685116
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  35685079 ttgcatatattatgcattgtccttaccaactgagctaa 35685116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 40099401 - 40099438
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  40099401 ttgcatatattatgcattgtccttaccaactgagctaa 40099438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 204
Target Start/End: Original strand, 41543004 - 41543033
Alignment:
Q  175 catatattatgcattgtccataccaattga 204  Q
    ||||||||||||||||||||||||||||||    
T  41543004 catatattatgcattgtccataccaattga 41543033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 41668698 - 41668661
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  41668698 ttgcatatattatgcattgttcataccaactgagctaa 41668661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 42066755 - 42066718
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  42066755 ttgcatatattgtgcattgtccataccaactgagctaa 42066718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 43117208 - 43117245
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  43117208 ttgcatatattatgcattgtccttaccaactgagctaa 43117245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 44526171 - 44526134
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  44526171 ttgcgtatattatgcattgtccataccaactgagctaa 44526134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 7304815 - 7304783
Alignment:
Q  176 atatattatgcattgtccataccaattgagcta 208  Q
    ||||||||| |||||||||||||||||||||||    
T  7304815 atatattatacattgtccataccaattgagcta 7304783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 205
Target Start/End: Original strand, 8257073 - 8257105
Alignment:
Q  173 tgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||| |||||||||||||||||    
T  8257073 tgcatatattatgcactgtccataccaattgag 8257105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 10195665 - 10195717
Alignment:
Q  157 tttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||| | |||| |||||||||||||||||| |||||| ||| ||||||||    
T  10195665 tttgaactccagatcttgcatatattatgcattatccatatcaactgagctaa 10195717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 12353698 - 12353666
Alignment:
Q  173 tgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||| |||||||||||    
T  12353698 tgcatatattatgcattgtccttaccaattgag 12353666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 18324905 - 18324945
Alignment:
Q  165 ctagatattgcatatattatgcattgtccataccaattgag 205  Q
    |||||| |||||||||||||||||||||| |||||| ||||    
T  18324905 ctagatcttgcatatattatgcattgtccttaccaactgag 18324945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 34191307 - 34191363
Alignment:
Q  153 gggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||  ||||  || ||||||||||||||||||| |||||| ||||||||    
T  34191307 gggatttgaaccttagactttacatatattatgcattgtccctaccaactgagctaa 34191363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 36264497 - 36264529
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattga 204  Q
    |||||||||||||||||| ||||||||||||||    
T  36264497 ttgcatatattatgcattatccataccaattga 36264529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 41763897 - 41763933
Alignment:
Q  173 tgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  41763897 tgcatatactatgcattgtccataccaactgagctaa 41763933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 5250 - 5188
Alignment:
Q  147 gtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||| |||||||   |||  ||||||||||||||||||||||||||||||||||||||    
T  5250 gtggttggggtttgaacctcagaccttgcatatattatgcattgtccataccaattgagctaa 5188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 7082985 - 7083047
Alignment:
Q  147 gtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||| |||| ||||||| | |||| |||||||||||||||||||||| |||||||||||||||    
T  7082985 gtggctggggtttgaactccagatcttgcatatattatgcattgtccttaccaattgagctaa 7083047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 20744213 - 20744144
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||| ||||| ||| ||||||| | |||  ||||||||||||||||||||||||||||| ||||||||    
T  20744213 tttttttgtggtcggggtttgaaccccagaccttgcatatattatgcattgtccataccaactgagctaa 20744144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 17935797 - 17935735
Alignment:
Q  147 gtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||| ||||||||||| |||||  |||||||| |||||||||||||| ||||| ||||||||    
T  17935797 gtggtcgggatttgaaccctagaccttgcatattttatgcattgtccaaaccaactgagctaa 17935735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 32524413 - 32524471
Alignment:
Q  147 gtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||| ||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  32524413 gtggttggggtttgaaccctggactttgcatatattatgcattgtccctaccaattgag 32524471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 8569752 - 8569719
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||||||||    
T  8569752 ttgcatatattatgcattgtccataccaattgag 8569719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 8629714 - 8629747
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||||||||    
T  8629714 ttgcatatattatgcattgtccataccaattgag 8629747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 21373424 - 21373461
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||||||||||||    
T  21373424 ttgcatattttatgcattgtccataccaattgagctaa 21373461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 26400907 - 26400870
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||| |||||||||||||||||||||||    
T  26400907 ttgcatatattatgtattgtccataccaattgagctaa 26400870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 29740525 - 29740488
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||| |||||||||||||||||||||||||||||||||    
T  29740525 ttgcgtatattatgcattgtccataccaattgagctaa 29740488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 32053831 - 32053794
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  32053831 ttgcatatattatgcattgtccataccaactgagctaa 32053794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 13376354 - 13376318
Alignment:
Q  173 tgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||| |||||||||||||||||||||||||||||||    
T  13376354 tgcatgtattatgcattgtccataccaattgagctaa 13376318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 4455589 - 4455651
Alignment:
Q  147 gtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||| ||| ||||||| | |||  ||||||||||||||| ||||||||||||| ||||||||    
T  4455589 gtggtcggggtttgaaccccagaccttgcatatattatgccttgtccataccaactgagctaa 4455651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 8575595 - 8575629
Alignment:
Q  173 tgcatatattatgcattgtccataccaattgagct 207  Q
    ||||||||||||||||||||| |||||||||||||    
T  8575595 tgcatatattatgcattgtccctaccaattgagct 8575629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 10053290 - 10053256
Alignment:
Q  175 catatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||| ||||||||    
T  10053290 catatattatgcattgtccataccaactgagctaa 10053256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 10278501 - 10278463
Alignment:
Q  167 agatattgcatatattatgcattgtccataccaattgag 205  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  10278501 agatcttgcatatattatgcattgtccatatcaattgag 10278463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 655767 - 655804
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  655767 ttgcatatattatgcattgtcgataccaactgagctaa 655804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 2726435 - 2726468
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  2726435 ttgcatatattatgcattgtccataccaactgag 2726468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 9333774 - 9333737
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  9333774 ttgcatatataatgcattgtccttaccaattgagctaa 9333737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 9977100 - 9977067
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    |||||||||||||||||| |||||||||||||||    
T  9977100 ttgcatatattatgcattatccataccaattgag 9977067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 10780125 - 10780162
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  10780125 ttgcatatattatgcattgtccctaccaactgagctaa 10780162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 11982594 - 11982557
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  11982594 ttgcatatattatgtattgtccataccatttgagctaa 11982557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 14918286 - 14918355
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||| ||||| ||| ||||||| | |||  ||| |||||||||||||||||| |||||| ||||||||    
T  14918286 tttttttgtggtcggggtttgaaccccagaccttgtatatattatgcattgtccctaccaactgagctaa 14918355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 17382127 - 17382090
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  17382127 ttgcatatattatacattgtccataccaactgagctaa 17382090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 23629855 - 23629892
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||  |||||||||||||||    
T  23629855 ttgcatatattatgcattgtcattaccaattgagctaa 23629892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 26320581 - 26320618
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  26320581 ttgcatattttatgcattgtccataccaactgagctaa 26320618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 28758794 - 28758839
Alignment:
Q  148 tggttgggatttgaacactagatattgcatatattatgcattgtcc 193  Q
    |||||||| ||||||| ||||| |||||||||||||||| ||||||    
T  28758794 tggttggggtttgaaccctagacattgcatatattatgctttgtcc 28758839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 33938697 - 33938734
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  33938697 ttgcatatattatgcattgttcataccaactgagctaa 33938734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 12009 - 12045
Alignment:
Q  153 gggatttgaacactagatattgcatatattatgcatt 189  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  12009 gggatttaaaccctagatattgcatatattatgcatt 12045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 361796 - 361764
Alignment:
Q  173 tgcatatattatgcattgtccataccaattgag 205  Q
    |||||||||||||||||||||||||||| ||||    
T  361796 tgcatatattatgcattgtccataccaactgag 361764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 6631169 - 6631205
Alignment:
Q  173 tgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||| |||||||| |||||||||||||||    
T  6631169 tgcatatattatacattgtccttaccaattgagctaa 6631205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 28318070 - 28318042
Alignment:
Q  172 ttgcatatattatgcattgtccataccaa 200  Q
    |||||||||||||||||||||||||||||    
T  28318070 ttgcatatattatgcattgtccataccaa 28318042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 37364415 - 37364483
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagcta 208  Q
    |||||| ||||| ||||||||||| | |||| ||| |||| |||||||||||||||||||||| |||||    
T  37364415 ttttttggtggtcgggatttgaactccagatcttgtatattttatgcattgtccataccaattaagcta 37364483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 977959 - 977996
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  977959 ttgcatatattatgcattgtccataccaactgagctaa 977996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 10498713 - 10498750
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  10498713 ttgcatatattatgcattgtccataccaactgagctaa 10498750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 12746375 - 12746412
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||||| |||||||||    
T  12746375 ttgcatatattatgcattgtccataccacttgagctaa 12746412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 24428491 - 24428528
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  24428491 ttgcatatattatgcattgtccataccaactgagctaa 24428528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 25441518 - 25441555
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  25441518 ttgcatatattatgcattgtccataccaactgagctaa 25441555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 29631229 - 29631192
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  29631229 ttgcatatattatgcattgtccataccaactgagctaa 29631192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 53996342 - 53996305
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  53996342 ttgcatatattatgcattgtccataccaactgagctaa 53996305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 10308509 - 10308473
Alignment:
Q  173 tgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||| |||||||||||||||    
T  10308509 tgcatatattatgcattgtccctaccaattgagctaa 10308473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 51882203 - 51882251
Alignment:
Q  157 tttgaacactagatattgcatatattatgcattgtccataccaattgag 205  Q
    ||||||| || ||| ||||||||||||||||||||||||||||| ||||    
T  51882203 tttgaaccctggatcttgcatatattatgcattgtccataccaactgag 51882251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 17588427 - 17588372
Alignment:
Q  150 gttgggatttgaacactagatattgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||| |||| | |||| |||||||||||||||||||||| |||||| ||||    
T  17588427 gttgggattcgaaccccagatcttgcatatattatgcattgtccttaccaactgag 17588372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 33745168 - 33745105
Alignment:
Q  146 agtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||| |||| ||||||| | |||  |||||||| |||||||||||||||| ||||||||||||    
T  33745168 agtggctggggtttgaaccccagaccttgcatattttatgcattgtccatatcaattgagctaa 33745105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 52904160 - 52904198
Alignment:
Q  171 attgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  52904160 attgcatatattatgcattgtccttaccaactgagctaa 52904198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 1149087 - 1149124
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  1149087 ttgcatatattatgcattgtccttaccaactgagctaa 1149124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 7974530 - 7974567
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  7974530 ttgcatatattatgcattatccataccaactgagctaa 7974567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 8113580 - 8113617
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  8113580 ttgcatatattatgcattgtccttaccaactgagctaa 8113617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 9321423 - 9321460
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  9321423 ttgcatatattatgcattgtccaaaccaactgagctaa 9321460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 10926512 - 10926475
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  10926512 ttgcatatattatgcattgtccttaccaactgagctaa 10926475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 14827568 - 14827531
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  14827568 ttgcatattttatgcattgtccataccaactgagctaa 14827531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 16980372 - 16980409
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  16980372 ttgcatatattatgcattgtccttaccaactgagctaa 16980409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 18870743 - 18870780
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  18870743 ttgcatatattatgcattgtccctaccaactgagctaa 18870780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 19468494 - 19468461
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  19468494 ttgcatatattatgcattgtccataccaactgag 19468461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 21331435 - 21331472
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  21331435 ttgcatatattatgcattgtccataacaactgagctaa 21331472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 21506776 - 21506813
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  21506776 ttgcatattttatgcattgtccataccaactgagctaa 21506813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 25340942 - 25340979
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  25340942 ttgcatattttatgcattgtccataccaactgagctaa 25340979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 30229544 - 30229581
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  30229544 ttgcatattttatgcattgtcaataccaattgagctaa 30229581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 32629123 - 32629086
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  32629123 ttgcatattttatgcattgtccataccaactgagctaa 32629086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 33224690 - 33224723
Alignment:
Q  176 atatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||| |||||||||||||||    
T  33224690 atatattatgcattgtccttaccaattgagctaa 33224723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 200
Target Start/End: Original strand, 34326000 - 34326029
Alignment:
Q  171 attgcatatattatgcattgtccataccaa 200  Q
    ||||||||||||||||||||||||||||||    
T  34326000 attgcatatattatgcattgtccataccaa 34326029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 35191835 - 35191872
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  35191835 ttgcatatattatgcattgtccttaccaactgagctaa 35191872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 36431872 - 36431815
Alignment:
Q  152 tgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||| | ||| |||||||||||||| |||| ||| |||||| ||||||||    
T  36431872 tgggatttgaaccccagacattgcatatattatacattatccctaccaactgagctaa 36431815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 38130977 - 38131010
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  38130977 ttgcatatattatgcattgtccataccaactgag 38131010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 40575627 - 40575664
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  40575627 ttgcatatattatgcattgtctatactaattgagctaa 40575664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 43490435 - 43490472
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  43490435 ttgcatatattatgcattgttcataccaactgagctaa 43490472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 44579679 - 44579642
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  44579679 ttgcatattttatgcattgtccataccaactgagctaa 44579642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 45431991 - 45431954
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  45431991 ttgcatatattatgcattgtccctaccaactgagctaa 45431954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 46226095 - 46226128
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    |||||||||||||||||||||| |||||||||||    
T  46226095 ttgcatatattatgcattgtccctaccaattgag 46226128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 46483290 - 46483253
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  46483290 ttgcatatattatgcattgtccataccaactaagctaa 46483253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 48315010 - 48315079
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||| ||||| ||||||||||| |  ||  |||||||||||||||||| ||| |||||| ||||||||    
T  48315010 tttttttgtggtcgggatttgaaccccggaccttgcatatattatgcattatccttaccaactgagctaa 48315079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 50037354 - 50037317
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  50037354 ttgcatacattatgcattgtccataccaactgagctaa 50037317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 50570207 - 50570244
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  50570207 ttgcatatattatgcattgtctataccaactgagctaa 50570244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 51061099 - 51061066
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||| ||||||||||||||||||||||||    
T  51061099 ttgcatataatatgcattgtccataccaattgag 51061066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 52119419 - 52119382
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  52119419 ttgcatatattatgcattgtccttaccaactgagctaa 52119382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 53162241 - 53162204
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  53162241 ttgcatattttatgcattgtccatatcaattgagctaa 53162204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 54230117 - 54230154
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  54230117 ttgcatatattatgcattgtccttaccaactgagctaa 54230154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 55494729 - 55494696
Alignment:
Q  175 catatattatgcattgtccataccaattgagcta 208  Q
    ||||||||||||||||||| ||||||||||||||    
T  55494729 catatattatgcattgtccctaccaattgagcta 55494696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 8139758 - 8139730
Alignment:
Q  172 ttgcatatattatgcattgtccataccaa 200  Q
    |||||||||||||||||||||||||||||    
T  8139758 ttgcatatattatgcattgtccataccaa 8139730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 28093397 - 28093369
Alignment:
Q  172 ttgcatatattatgcattgtccataccaa 200  Q
    |||||||||||||||||||||||||||||    
T  28093397 ttgcatatattatgcattgtccataccaa 28093369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 32836215 - 32836179
Alignment:
Q  173 tgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  32836215 tgcatattttatgcattgtccataccaactgagctaa 32836179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 35126268 - 35126320
Alignment:
Q  153 gggatttgaacactagatattgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||| | |||| |||||||||||||||||| ||| |||||| ||||    
T  35126268 gggatttgaaccccagatcttgcatatattatgcattatccctaccaactgag 35126320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 39779067 - 39779039
Alignment:
Q  172 ttgcatatattatgcattgtccataccaa 200  Q
    |||||||||||||||||||||||||||||    
T  39779067 ttgcatatattatgcattgtccataccaa 39779039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 52172790 - 52172830
Alignment:
Q  157 tttgaacactagatattgcatatattatgcattgtccatac 197  Q
    ||||||| | |||| ||||||||||||||||||||||||||    
T  52172790 tttgaactccagatcttgcatatattatgcattgtccatac 52172830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 207
Target Start/End: Complemental strand, 64302 - 64267
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagct 207  Q
    ||||||||||||||||||||||||||||||||||||    
T  64302 ttgcatatattatgcattgtccataccaattgagct 64267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 12783721 - 12783756
Alignment:
Q  174 gcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||||||||||    
T  12783721 gcatatattatgcattgtccataccaattgagctaa 12783756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 25086544 - 25086489
Alignment:
Q  154 ggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||| |||||  |||||||| |||||||||||||||||||| ||||||||    
T  25086544 ggatttgaaccctagaccttgcatattttatgcattgtccataccaactgagctaa 25086489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 3509959 - 3509996
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  3509959 ttgcatatattatgcattgtccataccaactgagctaa 3509996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 8253782 - 8253745
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  8253782 ttgcatatattatgcattgtccataccaactgagctaa 8253745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 26803469 - 26803506
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  26803469 ttgcatatattatgcattgtccataccaactgagctaa 26803506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 34521208 - 34521245
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  34521208 ttgcatatattatgcattgtccataccaactgagctaa 34521245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 42045390 - 42045427
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  42045390 ttgcatatattatgcattgtccataccaactgagctaa 42045427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 45140024 - 45140061
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  45140024 ttgcatatattatgcattgtccataccaactgagctaa 45140061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 16580785 - 16580845
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaa 200  Q
    |||||| |||||||||||| |||| | |||  ||||||||||||| |||||||||||||||    
T  16580785 ttttttggtggttgggattcgaaccccagaccttgcatatattatacattgtccataccaa 16580845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 26644088 - 26644036
Alignment:
Q  157 tttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||| ||||| ||||||||| ||||| |||||||||||||||||| ||||    
T  26644088 tttgaaccctagacattgcatattttatgtattgtccataccaattgaactaa 26644036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 32561051 - 32560983
Alignment:
Q  137 ttcttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||| ||||| ||||||||||| |  ||  ||||||||||||| ||||||||||||||| ||||    
T  32561051 ttctttttttgtggtcgggatttgaaccccggaccttgcatatattatacattgtccataccaactgag 32560983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 4302514 - 4302467
Alignment:
Q  153 gggatttgaacactagatattgcatatattatgcattgtccataccaa 200  Q
    ||||||||||| |  ||| |||||||||||||||||||||||||||||    
T  4302514 gggatttgaactccggatcttgcatatattatgcattgtccataccaa 4302467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 205
Target Start/End: Original strand, 25165113 - 25165143
Alignment:
Q  175 catatattatgcattgtccataccaattgag 205  Q
    |||||||||||||||||||||||||||||||    
T  25165113 catatattatgcattgtccataccaattgag 25165143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Complemental strand, 29936027 - 29935993
Alignment:
Q  171 attgcatatattatgcattgtccataccaattgag 205  Q
    |||||||||||||||||||||||||||||| ||||    
T  29936027 attgcatatattatgcattgtccataccaactgag 29935993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Complemental strand, 37705169 - 37705135
Alignment:
Q  171 attgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| |||||    
T  37705169 attgcatatattatgcattgtccataccagttgag 37705135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 124462 - 124499
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  124462 ttgcatattttatgcattgtccataccaaatgagctaa 124499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 1794639 - 1794602
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||| || ||||||||    
T  1794639 ttgcatatattatgcattgtccatactaactgagctaa 1794602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 5279373 - 5279414
Alignment:
Q  157 tttgaacactagatattgcatatattatgcattgtccatacc 198  Q
    ||||||| | ||| ||||||||||||||||||||||||||||    
T  5279373 tttgaactccagacattgcatatattatgcattgtccatacc 5279414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 14520987 - 14520950
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  14520987 ttgcatattttatgcattgtccataccaactgagctaa 14520950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 15602198 - 15602231
Alignment:
Q  175 catatattatgcattgtccataccaattgagcta 208  Q
    |||||||||||||||||||||||||| |||||||    
T  15602198 catatattatgcattgtccataccaactgagcta 15602231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 15854106 - 15854143
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  15854106 ttgcatatattatgcatcgtccataccaactgagctaa 15854143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 17283994 - 17283957
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  17283994 ttgcatatattatgcattgtccttaccaactgagctaa 17283957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 18166645 - 18166608
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  18166645 ttgcatatattatgcattgtctataccaactgagctaa 18166608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 21400041 - 21400078
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  21400041 ttgcatatattatgcattgtccctaccaactgagctaa 21400078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 21638156 - 21638119
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  21638156 ttgcatatatcatgcattgtccgtaccaattgagctaa 21638119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 25533016 - 25532979
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  25533016 ttgcatatattatgcattgtccataccaactgaactaa 25532979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 32944779 - 32944742
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  32944779 ttgcatatattatgcattgtccataccaactaagctaa 32944742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 33020061 - 33020098
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  33020061 ttgcatatattatgcattgtccctaccagttgagctaa 33020098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 34733443 - 34733406
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  34733443 ttgcatatattatgcattgtccttaccaactgagctaa 34733406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 35473995 - 35473958
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  35473995 ttgcatatattatgcattatccttaccaattgagctaa 35473958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 36467018 - 36467075
Alignment:
Q  147 gtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattga 204  Q
    ||||| |||||||||||  || |  ||||||||||||||||||||||||| |||||||    
T  36467018 gtggtcgggatttgaaccttataccttgcatatattatgcattgtccatatcaattga 36467075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 38448884 - 38448921
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  38448884 ttgcatatattatgcattgtccttaccaactgagctaa 38448921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 40938519 - 40938486
Alignment:
Q  176 atatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||| |||||||||||||||||||||||    
T  40938519 atatattatgtattgtccataccaattgagctaa 40938486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 42888618 - 42888581
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  42888618 ttgcatattttatgcattgtccataccaactgagctaa 42888581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 44641570 - 44641533
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  44641570 ttgcatatattatgcattgtccatatcaactgagctaa 44641533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 45190287 - 45190324
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  45190287 ttgcatatattatgcattgtccataccaactgaactaa 45190324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 48100765 - 48100728
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  48100765 ttgcatattttatgcattgtccataccaactgagctaa 48100728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 48681951 - 48681988
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  48681951 ttgcatatattatgcattgttcataccaactgagctaa 48681988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 50595901 - 50595938
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  50595901 ttgcatattttatgcattgttcataccaattgagctaa 50595938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 50638934 - 50638971
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  50638934 ttgcatatattatgcattgtccttaccaactgagctaa 50638971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 51031950 - 51031881
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||| ||||| ||| ||||||| |||||| ||| ||||| |||||||||||  || ||||||||||||    
T  51031950 tttttttgtggtcggggtttgaaccctagattttgtatataatatgcattgtcactatcaattgagctaa 51031881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 52441529 - 52441566
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  52441529 ttgcatatattatgcattgtctataccaactgagctaa 52441566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 6567744 - 6567716
Alignment:
Q  181 ttatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||||||    
T  6567744 ttatgcattgtccataccaattgagctaa 6567716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 205
Target Start/End: Original strand, 10356202 - 10356234
Alignment:
Q  173 tgcatatattatgcattgtccataccaattgag 205  Q
    |||||||||||||||||||||||||||| ||||    
T  10356202 tgcatatattatgcattgtccataccaactgag 10356234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 31168 - 31210
Alignment:
Q  167 agatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||| ||||||||||||||||||||||||||||| ||||||||    
T  31168 agatcttgcatatattatgcattgtccataccaactgagctaa 31210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000007; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 48980535 - 48980493
Alignment:
Q  167 agatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| ||||||||||||||||||||||||| ||||||||    
T  48980535 agatattgtatatattatgcattgtccataccaactgagctaa 48980493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 10244770 - 10244733
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  10244770 ttgcatatattatgcattgtccataccaactgagctaa 10244733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 21286393 - 21286356
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||| |||||||||||||||||||||||    
T  21286393 ttgcatatattatgtattgtccataccaattgagctaa 21286356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 38374209 - 38374246
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  38374209 ttgcatatactatgcattgtccataccaattgagctaa 38374246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 39801749 - 39801712
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  39801749 ttgcatatattatgcattgtccataccaactgagctaa 39801712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 44558792 - 44558829
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  44558792 ttgcatatattatgcattgtccataccaactgagctaa 44558829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 7735605 - 7735545
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaa 200  Q
    |||||| ||||| ||| ||||||| |||||  |||||||| ||||||||||||||||||||    
T  7735605 ttttttggtggtcgggctttgaaccctagaccttgcatattttatgcattgtccataccaa 7735545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 27462454 - 27462490
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagcta 208  Q
    ||||||||||||||||||||||||||||| |||||||    
T  27462454 ttgcatatattatgcattgtccataccaactgagcta 27462490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 8683118 - 8683076
Alignment:
Q  167 agatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||    
T  8683118 agatcttgcatatattatgcattgtctataccaactgagctaa 8683076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 20205862 - 20205828
Alignment:
Q  175 catatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||| ||||||||    
T  20205862 catatattatgcattgtccataccaactgagctaa 20205828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 30857316 - 30857254
Alignment:
Q  147 gtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||| ||||||| | | |  ||||||||||||||||||||||||||||| | ||||||    
T  30857316 gtggttggggtttgaactcaaaaccttgcatatattatgcattgtccataccaactaagctaa 30857254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 43346585 - 43346619
Alignment:
Q  175 catatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||| ||||||||    
T  43346585 catatattatgcattgtccataccaactgagctaa 43346619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 3953484 - 3953447
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  3953484 ttgcatatattatgcattgtccataccgactgagctaa 3953447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 4340170 - 4340133
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  4340170 ttgcatatattatgcattgtccttaccaactgagctaa 4340133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 5526764 - 5526731
Alignment:
Q  176 atatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||| ||||||||    
T  5526764 atatattatgcattgtccataccaactgagctaa 5526731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 7872766 - 7872803
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  7872766 ttgcatatattatgcattgtccttaccaactgagctaa 7872803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 8615066 - 8615029
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  8615066 ttgcatatattatgcattgtccttaccaactgagctaa 8615029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 8901446 - 8901381
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgag 205  Q
    |||||| ||||| |||||| |||| | ||||  |||||||| ||||||||||||||| ||||||||    
T  8901446 ttttttggtggtcgggattcgaaccccagatcctgcatatactatgcattgtccatatcaattgag 8901381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 9522955 - 9522918
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  9522955 ttgcatatattatgcattgttcataccaactgagctaa 9522918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 18714491 - 18714454
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  18714491 ttgcatatattatgcattgtccttaccaactgagctaa 18714454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 19416557 - 19416520
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  19416557 ttgcatattttatgcattgtccataccaactgagctaa 19416520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 19599188 - 19599155
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  19599188 ttgcatatattatgcattgtccataccaactgag 19599155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 21050240 - 21050277
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  21050240 ttgcatatattatgcattgtccttaccaactgagctaa 21050277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 21099795 - 21099828
Alignment:
Q  176 atatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||| ||||||||    
T  21099795 atatattatgcattgtccataccaactgagctaa 21099828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 21105646 - 21105609
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  21105646 ttgcatatattatgcattttccataccaactgagctaa 21105609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 22991409 - 22991442
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  22991409 ttgcatatattatgcattgtccataccaactgag 22991442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 23413064 - 23413097
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  23413064 ttgcatatattatgcattgtccataccaactgag 23413097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 24991824 - 24991787
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  24991824 ttgcatatattatgcattgtccttaccaactgagctaa 24991787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 27263384 - 27263351
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  27263384 ttgcatatattatgcattgtccataccaactgag 27263351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 27270278 - 27270245
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  27270278 ttgcatatattatgcattgtccataccaactgag 27270245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 34891795 - 34891828
Alignment:
Q  176 atatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||| ||||||||||||||||||||||||    
T  34891795 atatattatacattgtccataccaattgagctaa 34891828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 35142167 - 35142204
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  35142167 ttgcatatattatgcattgtccatatcaactgagctaa 35142204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 37624586 - 37624553
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  37624586 ttgcatatattatgcattgtccataccaactgag 37624553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 38842026 - 38841993
Alignment:
Q  176 atatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||| ||||||||    
T  38842026 atatattatgcattgtccataccaactgagctaa 38841993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 41527603 - 41527566
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  41527603 ttgcatatattatgcattgtccataccaactaagctaa 41527566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 42043088 - 42043121
Alignment:
Q  176 atatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||| ||||||||    
T  42043088 atatattatgcattgtccataccaactgagctaa 42043121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 45088919 - 45088886
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    |||||||||||||||||||| |||||||||||||    
T  45088919 ttgcatatattatgcattgttcataccaattgag 45088886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 46207834 - 46207766
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||| ||||||||||| ||||||| |  || ||||||||| ||||||||||| |||||||| ||||||||    
T  46207834 ttttgtagtggttggggtttgaacccg-gacattgcatattttatgcattgttcataccaactgagctaa 46207766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 46987129 - 46987092
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  46987129 ttgcatatattatgcattgtccttaccaactgagctaa 46987092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 47342720 - 47342683
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  47342720 ttgcatattttatgcattgtccataccaactgagctaa 47342683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 48065245 - 48065212
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    |||||||||||||| |||||||||||||||||||    
T  48065245 ttgcatatattatgaattgtccataccaattgag 48065212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 48837910 - 48837877
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    |||||||||||||||||| |||||||||||||||    
T  48837910 ttgcatatattatgcattatccataccaattgag 48837877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 4346703 - 4346667
Alignment:
Q  173 tgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  4346703 tgcatatattatgcattgtccctaccaactgagctaa 4346667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 5041382 - 5041354
Alignment:
Q  172 ttgcatatattatgcattgtccataccaa 200  Q
    |||||||||||||||||||||||||||||    
T  5041382 ttgcatatattatgcattgtccataccaa 5041354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 5833088 - 5833048
Alignment:
Q  169 atattgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||| ||| |||||| ||||||||    
T  5833088 atattgcatatattatgcattatccctaccaactgagctaa 5833048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 6528823 - 6528859
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagcta 208  Q
    |||||||| |||||||||||||||||||| |||||||    
T  6528823 ttgcatattttatgcattgtccataccaactgagcta 6528859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 40200974 - 40201010
Alignment:
Q  173 tgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  40200974 tgcatatattatgtattgtccatatcaattgagctaa 40201010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000007; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 15889479 - 15889417
Alignment:
Q  147 gtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||| ||| ||||||| |||||  |||||||||||||||||||||| |||||| ||||||||    
T  15889479 gtggtcggggtttgaaccctagaccttgcatatattatgcattgtccctaccaactgagctaa 15889417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 37932373 - 37932336
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  37932373 ttgcatatattatgcattgtccataccaactgagctaa 37932336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 40715967 - 40716004
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  40715967 ttgcatatattatgcattgtccatatcaattgagctaa 40716004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 40959045 - 40959008
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  40959045 ttgcatatattatgcattgtcgataccaattgagctaa 40959008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 42505915 - 42505878
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  42505915 ttgcatatattatgcattgtccataccaactgagctaa 42505878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 3389220 - 3389172
Alignment:
Q  157 tttgaacactagatattgcatatattatgcattgtccataccaattgag 205  Q
    ||||||| | |||| ||||||||||||||||||||||||||||| ||||    
T  3389220 tttgaaccccagatcttgcatatattatgcattgtccataccaactgag 3389172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 19248540 - 19248485
Alignment:
Q  154 ggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||| | | | |||||||||||||||||||||| ||||||| ||||||||    
T  19248540 ggatttgaaccccaaacattgcatatattatgcattgtctataccaactgagctaa 19248485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 5485230 - 5485192
Alignment:
Q  171 attgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  5485230 attgcatatattatgcattgtccctaccaactgagctaa 5485192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 8902793 - 8902831
Alignment:
Q  171 attgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  8902793 attgcatatattatacattgtccataccaactgagctaa 8902831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 12611053 - 12611087
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagc 206  Q
    |||||||| ||||||||||||||||||||||||||    
T  12611053 ttgcatattttatgcattgtccataccaattgagc 12611087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 16188864 - 16188830
Alignment:
Q  175 catatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||| ||||||||    
T  16188864 catatattatgcattgtccataccaactgagctaa 16188830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 16188966 - 16188932
Alignment:
Q  175 catatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||| ||||||||    
T  16188966 catatattatgcattgtccataccaactgagctaa 16188932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 20927703 - 20927645
Alignment:
Q  151 ttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||    ||| |||||||||||||| |||||||||||||| ||||||||    
T  20927703 ttgggatttgaacctcggatcttgcatatattatgtattgtccataccaactgagctaa 20927645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 26409293 - 26409259
Alignment:
Q  175 catatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||| ||||||||    
T  26409293 catatattatgcattgtccataccaactgagctaa 26409259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 39610358 - 39610396
Alignment:
Q  171 attgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  39610358 attgcatatattatgcattgtccatatcaactgagctaa 39610396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 39804477 - 39804511
Alignment:
Q  175 catatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||| |||||||||||||||||||||    
T  39804477 catatattatgcaatgtccataccaattgagctaa 39804511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 205
Target Start/End: Complemental strand, 40175693 - 40175663
Alignment:
Q  175 catatattatgcattgtccataccaattgag 205  Q
    |||||||||||||||||||||||||||||||    
T  40175693 catatattatgcattgtccataccaattgag 40175663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 5246174 - 5246207
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||| ||||||||||||    
T  5246174 ttgcatatattatgcattgtctataccaattgag 5246207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 5846072 - 5846035
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  5846072 ttgcatatattatgcattgtccttaccaactgagctaa 5846035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 6327739 - 6327702
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  6327739 ttgcatatattatgcattgtccttactaattgagctaa 6327702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 6489050 - 6489013
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  6489050 ttgcatatattatgcattgtccctaccaactgagctaa 6489013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 6624819 - 6624782
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  6624819 ttgcatatattatgcattgtccatgccaactgagctaa 6624782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 10199058 - 10199025
Alignment:
Q  176 atatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||| ||||||||    
T  10199058 atatattatgcattgtccataccaactgagctaa 10199025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 10704349 - 10704386
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  10704349 ttgcatattttatgcattgtccataccaactgagctaa 10704386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 11844456 - 11844493
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  11844456 ttgcatatattatgcattgtccttaccaactgagctaa 11844493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 14188349 - 14188390
Alignment:
Q  168 gatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||| |||||||||||||| ||| ||||    
T  14188349 gatattgcatatattatggattgtccataccaactgaactaa 14188390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 16133083 - 16133120
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  16133083 ttgcatatattatgcattgtccttaccaactgagctaa 16133120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 17046377 - 17046344
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  17046377 ttgcatatattatgcattgtccataccaactgag 17046344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 17862022 - 17861985
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  17862022 ttgcatatattatgcattgtccctaccaactgagctaa 17861985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 18331750 - 18331713
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  18331750 ttgcatattttatgcattgtccataccaagtgagctaa 18331713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 18489094 - 18489131
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  18489094 ttgcatatattatgcattgtctataccaactgagctaa 18489131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 19068457 - 19068494
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  19068457 ttgcatatattatgcattatccataccaactgagctaa 19068494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 19759972 - 19759935
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||| | |||||||||||||||    
T  19759972 ttgcatatattatgcattgtacctaccaattgagctaa 19759935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 20688083 - 20688046
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  20688083 ttgcatatattatgcattgtccaaaccaactgagctaa 20688046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 22522819 - 22522856
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||||||  |||||||    
T  22522819 ttgcatatattatgcattgtccataccaaccgagctaa 22522856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 24485742 - 24485705
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  24485742 ttgcatatattatgcattgtccataccaactaagctaa 24485705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 28207175 - 28207138
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  28207175 ttgcatattttatgcattgtccataccaactgagctaa 28207138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 31602843 - 31602880
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  31602843 ttgcatatattatgcattgttcataccaactgagctaa 31602880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 31877971 - 31877938
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  31877971 ttgcatatattatgcattgtccataccaagtgag 31877938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 34436894 - 34436857
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  34436894 ttgcatatattatgcattgtccctaccaactgagctaa 34436857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 36321512 - 36321549
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  36321512 ttgcatatattatgcattgtccttaccaactgagctaa 36321549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 39914944 - 39914911
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    |||||||||||||||||||||| |||||||||||    
T  39914944 ttgcatatattatgcattgtccttaccaattgag 39914911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 41650957 - 41650990
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  41650957 ttgcatatattatgcattgtccataccaactgag 41650990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 15906561 - 15906513
Alignment:
Q  154 ggatttgaacactagatattgcatatattatgcattgtccataccaatt 202  Q
    |||||||||| |||||  |||||||| |||||||||||| |||||||||    
T  15906561 ggatttgaaccctagaccttgcatattttatgcattgtctataccaatt 15906513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 24408565 - 24408501
Alignment:
Q  145 tagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||| ||| ||||||| | |||  ||||||||||||||||| ||||| ||||| ||||||||    
T  24408565 tagtggtcggggtttgaaccccagaccttgcatatattatgcatcgtccaaaccaactgagctaa 24408501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 26655504 - 26655472
Alignment:
Q  175 catatattatgcattgtccataccaattgagct 207  Q
    |||||||||||||||||||||||||| ||||||    
T  26655504 catatattatgcattgtccataccaactgagct 26655472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 26927089 - 26927057
Alignment:
Q  175 catatattatgcattgtccataccaattgagct 207  Q
    |||||||||||||||||||||||||| ||||||    
T  26927089 catatattatgcattgtccataccaactgagct 26927057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 37021365 - 37021425
Alignment:
Q  147 gtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagct 207  Q
    ||||| ||| ||||||| ||  || |||||||||||||||||| |||| ||||||||||||    
T  37021365 gtggtcggggtttgaaccctgaatcttgcatatattatgcattatccaaaccaattgagct 37021425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 40041 - 40004
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  40041 ttgcatatattatgcattgtccataccaactgagctaa 40004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 64261 - 64224
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||||||||| |||||||||    
T  64261 ttgcatatattatgcattgtccataccagttgagctaa 64224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 56822 - 56855
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||||||||    
T  56822 ttgcatatattatgcattgtccataccaattgag 56855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 444456 - 444419
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||||||||||||    
T  444456 ttgcatatattatgcattgtccttaccaattgagctaa 444419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 8148445 - 8148482
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  8148445 ttgcatatattatacattgtccataccaattgagctaa 8148482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 8717493 - 8717530
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  8717493 ttgcatatattatgcattgtccataccaactgagctaa 8717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 12910824 - 12910861
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  12910824 ttgcatatattatgcattgtccataccaactgagctaa 12910861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 29499814 - 29499777
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||||||||||||    
T  29499814 ttgcatattttatgcattgtccataccaattgagctaa 29499777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 30427774 - 30427737
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  30427774 ttgcatatattatgcattgtccataccaactgagctaa 30427737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 7997018 - 7996946
Alignment:
Q  137 ttcttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||| | ||||| ||| ||||||| | |||  ||||||||||||||| ||||||||||||| ||||||||    
T  7997018 ttcttttgtggtggtcggggtttgaaccccagaccttgcatatattatgcgttgtccataccaactgagctaa 7996946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 37117517 - 37117579
Alignment:
Q  147 gtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||| ||||||||||   |||| ||| |||||||||||||||| |||||||||||| ||||    
T  37117517 gtggttaggatttgaacctcagatcttgaatatattatgcattgttcataccaattgatctaa 37117579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 498774 - 498741
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  498774 ttgcatatattatgcattgtccataccaactgag 498741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 6447232 - 6447199
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  6447232 ttgcatatattatgcattgtccataccaactgag 6447199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 8137978 - 8137941
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  8137978 ttgcatattttatgcattgtccataccaactgagctaa 8137941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 11709029 - 11708992
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  11709029 ttgcatatattatgcattgtccctaccaactgagctaa 11708992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 13286174 - 13286137
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  13286174 ttgcatatattatgcattgtctataccaactgagctaa 13286137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 13357459 - 13357492
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||||||||||||||||||||||| ||||    
T  13357459 ttgcatatattatgcattgtccataccaactgag 13357492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 15438496 - 15438459
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  15438496 ttgcatatattatgcattgtccttaccaagtgagctaa 15438459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 15529800 - 15529763
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  15529800 ttgcatatattatgcattgtccttaccaagtgagctaa 15529763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 17704056 - 17704019
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  17704056 ttgcatatattatgcattgtccttaccaactgagctaa 17704019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 19163554 - 19163591
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  19163554 ttgcataaattatgcattgtccataccaactgagctaa 19163591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 19778108 - 19778071
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  19778108 ttgcatatattatgcattgtccttaccaactgagctaa 19778071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 23852954 - 23852917
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  23852954 ttgcatatattatgcattgtccataccgactgagctaa 23852917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 27718912 - 27718949
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  27718912 ttgcatatattatgcattgtccatatcaactgagctaa 27718949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 30623336 - 30623299
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  30623336 ttgcatatattatgcattgtccttaccaactgagctaa 30623299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 32051550 - 32051587
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  32051550 ttgcatatattatgcattgtccaaaccaactgagctaa 32051587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 32192937 - 32192900
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  32192937 ttgcatatattatgcattgtccataccaactaagctaa 32192900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 33451367 - 33451404
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  33451367 ttgcatatattatgcattatccataccaactgagctaa 33451404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 34420880 - 34420913
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    |||||||| |||||||||||||||||||||||||    
T  34420880 ttgcatattttatgcattgtccataccaattgag 34420913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 37938538 - 37938501
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  37938538 ttgcatatattatgcattatccataccaactgagctaa 37938501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 39821927 - 39821890
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  39821927 ttgcatatattatgcattgtccctaccaactgagctaa 39821890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 40401633 - 40401600
Alignment:
Q  175 catatattatgcattgtccataccaattgagcta 208  Q
    ||||| ||||||||||||||||||||||||||||    
T  40401633 catattttatgcattgtccataccaattgagcta 40401600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 41625269 - 41625200
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||| ||||||||| || |||| |||||  || ||||||||||||||| | |||||||| ||||||||    
T  41625269 ttttttggtggttggggttcgaaccctagaccttacatatattatgcattattcataccaactgagctaa 41625200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 42208487 - 42208524
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  42208487 ttgcatatattatgcattgtccttaccaactgagctaa 42208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 4830051 - 4830023
Alignment:
Q  172 ttgcatatattatgcattgtccataccaa 200  Q
    |||||||||||||||||||||||||||||    
T  4830051 ttgcatatattatgcattgtccataccaa 4830023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 8402361 - 8402397
Alignment:
Q  173 tgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  8402361 tgcatatattatgcaatgtccctaccaattgagctaa 8402397  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 10601806 - 10601778
Alignment:
Q  172 ttgcatatattatgcattgtccataccaa 200  Q
    |||||||||||||||||||||||||||||    
T  10601806 ttgcatatattatgcattgtccataccaa 10601778  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 11479623 - 11479691
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagcta 208  Q
    |||| |||| || ||||||||||| ||| |  |||||||| |||||||||||| ||||||| |||||||    
T  11479623 ttttatagttgtcgggatttgaaccctaaaccttgcatattttatgcattgtctataccaactgagcta 11479691  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 12748944 - 12748916
Alignment:
Q  172 ttgcatatattatgcattgtccataccaa 200  Q
    |||||||||||||||||||||||||||||    
T  12748944 ttgcatatattatgcattgtccataccaa 12748916  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 24023815 - 24023863
Alignment:
Q  157 tttgaacactagatattgcatatattatgcattgtccataccaattgag 205  Q
    ||||||||| |||  |||||||| |||||||||||||||||||| ||||    
T  24023815 tttgaacaccagaccttgcatattttatgcattgtccataccaactgag 24023863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 29908054 - 29908018
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagcta 208  Q
    |||||||||||||||||||||| |||||| |||||||    
T  29908054 ttgcatatattatgcattgtccctaccaactgagcta 29908018  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 34968598 - 34968562
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagcta 208  Q
    |||||||||||||||||| |||||||||| |||||||    
T  34968598 ttgcatatattatgcattatccataccaactgagcta 34968562  T

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Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 37141400 - 37141372
Alignment:
Q  172 ttgcatatattatgcattgtccataccaa 200  Q
    |||||||||||||||||||||||||||||    
T  37141400 ttgcatatattatgcattgtccataccaa 37141372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 38763533 - 38763569
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagcta 208  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  38763533 ttgcatatattatgcattgtccaaaccaactgagcta 38763569  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 172 - 207
Target Start/End: Complemental strand, 122225 - 122190
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagct 207  Q
    |||||||||||| |||||||||||||||||||||||    
T  122225 ttgcatatattaagcattgtccataccaattgagct 122190  T

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Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 122934 - 122901
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    |||||||||||||||||||| |||||||||||||    
T  122934 ttgcatatattatgcattgttcataccaattgag 122901  T

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Target: scaffold1379 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 1679 - 1642
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  1679 ttgcatatactatgcattgtccatactaattgagctaa 1642  T

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Target: scaffold0735 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 1571 - 1534
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  1571 ttgcatattttatgcattgtccataccaactgagctaa 1534  T

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Target: scaffold0533 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 8869 - 8902
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgag 205  Q
    |||||||||||||||||||||| |||||||||||    
T  8869 ttgcatatattatgcattgtccttaccaattgag 8902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 17775 - 17738
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  17775 ttgcatgtattatgcattgtccataccaactgagctaa 17738  T

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Target: scaffold0098 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 5499 - 5431
Alignment:
Q  140 ttttttagtggttgggatttgaacactagatattgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||| ||||||||| ||||||| || ||| ||| |||||||||||||||| | |||||| ||||||||    
T  5499 ttttttggtggttggggtttgaaccct-gatcttggatatattatgcattgttcttaccaactgagctaa 5431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 56827 - 56790
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  56827 ttgcatatattatacattgtccataccaactgagctaa 56790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 47259 - 47296
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  47259 ttgcatattttatgcattgtccataccaactgagctaa 47296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 185306 - 185269
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  185306 ttgcatattttatgcattgtccataccaactgagctaa 185269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 239850 - 239813
Alignment:
Q  172 ttgcatatattatgcattgtccataccaattgagctaa 209  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  239850 ttgcatatattatgcattgtccttaccaactgagctaa 239813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Original strand, 7557 - 7585
Alignment:
Q  172 ttgcatatattatgcattgtccataccaa 200  Q
    |||||||||||||||||||||||||||||    
T  7557 ttgcatatattatgcattgtccataccaa 7585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 109176 - 109148
Alignment:
Q  172 ttgcatatattatgcattgtccataccaa 200  Q
    |||||||||||||||||||||||||||||    
T  109176 ttgcatatattatgcattgtccataccaa 109148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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