View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13762_high_10 (Length: 332)

Name: NF13762_high_10
Description: NF13762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13762_high_10
NF13762_high_10
[»] chr1 (57 HSPs)
chr1 (14-163)||(47602862-47603011)
chr1 (14-163)||(24469817-24469966)
chr1 (14-164)||(32179849-32179999)
chr1 (14-165)||(36419092-36419243)
chr1 (25-163)||(7702837-7702975)
chr1 (14-163)||(37441186-37441335)
chr1 (19-163)||(35810714-35810858)
chr1 (23-163)||(25124885-25125025)
chr1 (19-163)||(50447337-50447481)
chr1 (19-154)||(7596389-7596524)
chr1 (14-165)||(46264942-46265093)
chr1 (21-163)||(42916114-42916256)
chr1 (23-163)||(15306493-15306633)
chr1 (14-154)||(20349137-20349277)
chr1 (22-163)||(7995970-7996111)
chr1 (28-164)||(15014320-15014456)
chr1 (27-163)||(45581008-45581144)
chr1 (23-154)||(28006350-28006481)
chr1 (23-156)||(19508528-19508661)
chr1 (23-163)||(23916810-23916950)
chr1 (19-163)||(29677519-29677663)
chr1 (19-154)||(20347662-20347797)
chr1 (14-165)||(38061176-38061327)
chr1 (45-163)||(14578585-14578703)
chr1 (20-154)||(40159639-40159773)
chr1 (33-163)||(44596527-44596657)
chr1 (54-163)||(12224575-12224684)
chr1 (23-156)||(31869594-31869727)
chr1 (60-121)||(35309607-35309668)
chr1 (23-164)||(43087465-43087606)
chr1 (23-163)||(24575909-24576049)
chr1 (23-163)||(39802767-39802907)
chr1 (23-163)||(42937074-42937214)
chr1 (22-153)||(5204479-5204610)
chr1 (23-154)||(23915606-23915737)
chr1 (23-157)||(31816568-31816702)
chr1 (14-155)||(45653440-45653580)
chr1 (20-163)||(15257171-15257314)
chr1 (42-164)||(7016074-7016196)
chr1 (25-163)||(47983257-47983395)
chr1 (14-163)||(21680656-21680805)
chr1 (45-157)||(15662971-15663083)
chr1 (19-163)||(27076515-27076659)
chr1 (25-157)||(14796590-14796722)
chr1 (25-157)||(14805464-14805596)
chr1 (80-163)||(7841680-7841762)
chr1 (20-165)||(7956321-7956466)
chr1 (23-96)||(13645247-13645320)
chr1 (25-165)||(14101864-14102005)
chr1 (14-163)||(36119063-36119211)
chr1 (23-99)||(14770580-14770656)
chr1 (23-107)||(48575136-48575220)
chr1 (23-157)||(3577670-3577805)
chr1 (80-163)||(6413296-6413379)
chr1 (23-101)||(51432265-51432343)
chr1 (21-163)||(30251422-30251565)
chr1 (6-68)||(33233645-33233707)
[»] chr7 (60 HSPs)
chr7 (14-164)||(5776129-5776279)
chr7 (14-163)||(37334274-37334423)
chr7 (14-163)||(5794936-5795085)
chr7 (14-163)||(665847-665996)
chr7 (14-163)||(43052868-43053017)
chr7 (14-154)||(3930725-3930865)
chr7 (14-164)||(28949757-28949907)
chr7 (14-154)||(36926995-36927135)
chr7 (14-163)||(42072079-42072228)
chr7 (14-155)||(45176241-45176382)
chr7 (14-163)||(48505795-48505937)
chr7 (14-163)||(26216268-26216410)
chr7 (60-154)||(388988-389082)
chr7 (14-163)||(20400992-20401141)
chr7 (19-163)||(7447877-7448021)
chr7 (23-163)||(3942181-3942321)
chr7 (16-90)||(15434241-15434315)
chr7 (23-164)||(33935513-33935654)
chr7 (23-163)||(44421901-44422042)
chr7 (23-163)||(22075068-22075208)
chr7 (23-152)||(10618926-10619055)
chr7 (23-163)||(11595796-11595936)
chr7 (23-163)||(33124700-33124840)
chr7 (25-165)||(33898942-33899082)
chr7 (19-154)||(18250002-18250137)
chr7 (23-154)||(45055733-45055864)
chr7 (20-157)||(26719817-26719954)
chr7 (23-163)||(222226-222366)
chr7 (23-166)||(17025358-17025501)
chr7 (23-153)||(23227009-23227139)
chr7 (23-153)||(23236162-23236292)
chr7 (21-163)||(36472442-36472584)
chr7 (14-163)||(49034224-49034373)
chr7 (23-165)||(21760581-21760723)
chr7 (23-165)||(46573610-46573752)
chr7 (31-149)||(46652647-46652765)
chr7 (19-164)||(32356962-32357107)
chr7 (23-163)||(37401566-37401706)
chr7 (23-154)||(18740227-18740358)
chr7 (23-165)||(33171532-33171674)
chr7 (19-170)||(35543549-35543697)
chr7 (33-101)||(48634462-48634530)
chr7 (23-106)||(23237574-23237657)
chr7 (45-164)||(37106853-37106972)
chr7 (23-101)||(40480112-40480191)
chr7 (19-157)||(31491816-31491954)
chr7 (14-97)||(10096467-10096550)
chr7 (23-156)||(17608717-17608847)
chr7 (19-100)||(2466579-2466661)
chr7 (45-163)||(27231539-27231657)
chr7 (14-68)||(29527382-29527436)
chr7 (14-91)||(37250030-37250107)
chr7 (23-162)||(41449756-41449884)
chr7 (12-68)||(49001081-49001137)
chr7 (86-157)||(33019369-33019440)
chr7 (125-163)||(15434312-15434350)
chr7 (25-95)||(37239840-37239910)
chr7 (23-56)||(23223561-23223594)
chr7 (23-68)||(44994059-44994104)
chr7 (14-98)||(29037845-29037929)
[»] chr4 (62 HSPs)
chr4 (14-164)||(21441572-21441722)
chr4 (14-165)||(53369863-53370014)
chr4 (14-163)||(50605999-50606148)
chr4 (14-163)||(12789552-12789701)
chr4 (14-163)||(19852969-19853118)
chr4 (14-163)||(45674826-45674975)
chr4 (14-150)||(44791256-44791392)
chr4 (14-164)||(48977567-48977717)
chr4 (14-116)||(49820973-49821075)
chr4 (19-165)||(9469773-9469919)
chr4 (19-163)||(36543777-36543921)
chr4 (20-165)||(22184500-22184645)
chr4 (19-157)||(36156300-36156438)
chr4 (22-163)||(48731173-48731314)
chr4 (23-163)||(11055226-11055366)
chr4 (14-154)||(26632927-26633067)
chr4 (19-154)||(51995074-51995209)
chr4 (258-332)||(21273861-21273935)
chr4 (14-165)||(56224136-56224287)
chr4 (23-157)||(49083240-49083374)
chr4 (14-163)||(24007903-24008052)
chr4 (25-154)||(50146927-50147056)
chr4 (23-164)||(52813601-52813742)
chr4 (19-163)||(15697083-15697227)
chr4 (14-75)||(53369679-53369740)
chr4 (23-154)||(12673037-12673168)
chr4 (19-165)||(13455697-13455843)
chr4 (18-163)||(80492-80637)
chr4 (23-163)||(6866109-6866243)
chr4 (23-166)||(46944541-46944684)
chr4 (14-168)||(1803489-1803638)
chr4 (19-157)||(32397704-32397842)
chr4 (20-154)||(40797827-40797961)
chr4 (25-163)||(48339099-48339237)
chr4 (23-165)||(52706217-52706359)
chr4 (23-163)||(55891985-55892125)
chr4 (23-162)||(7505529-7505668)
chr4 (23-162)||(19455159-19455298)
chr4 (22-157)||(27891386-27891520)
chr4 (21-163)||(51407949-51408091)
chr4 (23-164)||(49405634-49405775)
chr4 (25-165)||(52733699-52733838)
chr4 (20-95)||(25134571-25134646)
chr4 (23-146)||(48151143-48151266)
chr4 (73-163)||(28265673-28265763)
chr4 (19-97)||(43812123-43812201)
chr4 (23-101)||(44378250-44378328)
chr4 (23-99)||(22721328-22721403)
chr4 (20-154)||(9222141-9222273)
chr4 (14-120)||(5762588-5762693)
chr4 (14-120)||(5769158-5769263)
chr4 (23-163)||(9959343-9959471)
chr4 (23-65)||(16742423-16742465)
chr4 (23-65)||(38493075-38493117)
chr4 (23-164)||(48802474-48802616)
chr4 (48-101)||(13761824-13761877)
chr4 (23-127)||(24550077-24550182)
chr4 (59-163)||(38791728-38791831)
chr4 (14-65)||(41822102-41822153)
chr4 (34-120)||(5764616-5764702)
chr4 (34-120)||(5766860-5766946)
chr4 (80-157)||(9874214-9874291)
[»] chr3 (38 HSPs)
chr3 (14-163)||(32689160-32689309)
chr3 (14-154)||(41609879-41610018)
chr3 (14-154)||(23206317-23206456)
chr3 (23-154)||(39942809-39942940)
chr3 (23-164)||(52199429-52199570)
chr3 (22-163)||(39469531-39469672)
chr3 (23-163)||(9505121-9505261)
chr3 (19-163)||(39135350-39135494)
chr3 (19-163)||(46293213-46293357)
chr3 (19-163)||(54393443-54393587)
chr3 (23-163)||(19560774-19560914)
chr3 (19-163)||(33438731-33438875)
chr3 (25-163)||(25253704-25253842)
chr3 (14-163)||(44574517-44574666)
chr3 (23-163)||(12710702-12710842)
chr3 (14-154)||(52934803-52934943)
chr3 (23-164)||(30662130-30662271)
chr3 (14-155)||(18074567-18074708)
chr3 (14-93)||(50965394-50965474)
chr3 (14-93)||(51068529-51068609)
chr3 (19-154)||(20550211-20550346)
chr3 (23-154)||(26049549-26049680)
chr3 (23-154)||(28242583-28242714)
chr3 (20-163)||(40943558-40943701)
chr3 (23-100)||(5418678-5418755)
chr3 (44-153)||(30743593-30743702)
chr3 (23-75)||(52199389-52199441)
chr3 (25-100)||(28687074-28687149)
chr3 (6-68)||(53529685-53529747)
chr3 (23-153)||(1674629-1674759)
chr3 (33-163)||(55452670-55452799)
chr3 (22-131)||(15822381-15822490)
chr3 (14-157)||(26136324-26136467)
chr3 (20-95)||(54432259-54432334)
chr3 (34-119)||(36917867-36917952)
chr3 (85-154)||(45714758-45714827)
chr3 (23-119)||(1072753-1072849)
chr3 (14-58)||(37269063-37269107)
[»] chr2 (34 HSPs)
chr2 (14-168)||(33831486-33831640)
chr2 (14-163)||(27634662-27634811)
chr2 (14-163)||(36538647-36538796)
chr2 (14-163)||(41959134-41959283)
chr2 (14-151)||(34064696-34064833)
chr2 (14-154)||(26436345-26436484)
chr2 (33-153)||(33163990-33164110)
chr2 (23-163)||(3409188-3409328)
chr2 (23-154)||(44740492-44740623)
chr2 (25-157)||(24844672-24844804)
chr2 (23-163)||(11027908-11028048)
chr2 (23-154)||(30713156-30713287)
chr2 (23-119)||(2647018-2647114)
chr2 (22-157)||(11006980-11007113)
chr2 (19-163)||(40458917-40459061)
chr2 (23-163)||(34116173-34116313)
chr2 (35-154)||(41332243-41332362)
chr2 (23-101)||(9963759-9963837)
chr2 (22-119)||(13829877-13829974)
chr2 (22-163)||(27464572-27464713)
chr2 (7-119)||(14103251-14103363)
chr2 (51-163)||(27902439-27902551)
chr2 (33-100)||(2578089-2578156)
chr2 (14-93)||(38409641-38409720)
chr2 (56-156)||(35796258-35796358)
chr2 (27-157)||(17368996-17369125)
chr2 (19-97)||(19589841-19589918)
chr2 (80-154)||(20203723-20203797)
chr2 (14-49)||(33831418-33831453)
chr2 (23-65)||(40680221-40680263)
chr2 (23-68)||(39690170-39690215)
chr2 (23-99)||(1094457-1094533)
chr2 (37-153)||(17616281-17616397)
chr2 (23-99)||(18667751-18667827)
[»] chr5 (40 HSPs)
chr5 (14-163)||(27906089-27906238)
chr5 (14-157)||(18880183-18880326)
chr5 (18-164)||(29328039-29328184)
chr5 (14-163)||(31620859-31621008)
chr5 (19-163)||(38522861-38523005)
chr5 (19-163)||(3801364-3801508)
chr5 (23-163)||(15933160-15933303)
chr5 (23-163)||(1840687-1840827)
chr5 (20-157)||(19282120-19282257)
chr5 (28-157)||(31021868-31021997)
chr5 (23-163)||(20188973-20189113)
chr5 (19-163)||(27450581-27450725)
chr5 (23-163)||(41783325-41783465)
chr5 (14-153)||(39407397-39407536)
chr5 (23-153)||(14500716-14500846)
chr5 (14-165)||(34719655-34719806)
chr5 (19-163)||(10493981-10494125)
chr5 (23-163)||(26218047-26218187)
chr5 (23-163)||(27196077-27196217)
chr5 (14-165)||(26298302-26298453)
chr5 (14-153)||(26299838-26299977)
chr5 (23-153)||(39414181-39414312)
chr5 (23-154)||(20190594-20190724)
chr5 (19-154)||(32156955-32157081)
chr5 (26-164)||(32945020-32945158)
chr5 (23-119)||(11136051-11136146)
chr5 (26-154)||(34724763-34724891)
chr5 (14-164)||(34857338-34857488)
chr5 (14-163)||(19716174-19716318)
chr5 (14-101)||(34723715-34723802)
chr5 (29-144)||(40056382-40056497)
chr5 (19-153)||(2676012-2676146)
chr5 (70-163)||(43386763-43386858)
chr5 (73-164)||(5382824-5382915)
chr5 (80-167)||(10327987-10328074)
chr5 (14-89)||(39409131-39409206)
chr5 (86-164)||(28247473-28247551)
chr5 (19-157)||(17168449-17168589)
chr5 (18-101)||(1225346-1225429)
chr5 (14-99)||(30660971-30661056)
[»] scaffold0316 (1 HSPs)
scaffold0316 (14-164)||(19287-19437)
[»] chr8 (20 HSPs)
chr8 (14-154)||(11161563-11161703)
chr8 (14-163)||(453474-453623)
chr8 (19-163)||(33279977-33280121)
chr8 (23-165)||(9412522-9412664)
chr8 (23-163)||(3307934-3308074)
chr8 (19-154)||(34516134-34516269)
chr8 (23-153)||(27189092-27189222)
chr8 (60-165)||(43384831-43384936)
chr8 (23-101)||(43967510-43967588)
chr8 (19-93)||(23181151-23181225)
chr8 (23-163)||(34655035-34655175)
chr8 (23-153)||(1091727-1091857)
chr8 (14-119)||(9135943-9136048)
chr8 (60-163)||(12378389-12378492)
chr8 (23-68)||(10749314-10749359)
chr8 (27-163)||(24854603-24854739)
chr8 (63-163)||(39478090-39478190)
chr8 (23-153)||(32740639-32740769)
chr8 (132-164)||(23181246-23181278)
chr8 (34-114)||(35058318-35058398)
[»] chr6 (23 HSPs)
chr6 (14-163)||(10346712-10346861)
chr6 (14-163)||(8200633-8200771)
chr6 (14-163)||(5640252-5640401)
chr6 (20-154)||(4441310-4441444)
chr6 (19-163)||(3081718-3081862)
chr6 (19-163)||(10961796-10961940)
chr6 (20-165)||(6999264-6999409)
chr6 (32-164)||(1501857-1501989)
chr6 (20-163)||(13312019-13312164)
chr6 (23-154)||(33110458-33110589)
chr6 (19-153)||(7437300-7437434)
chr6 (23-100)||(32163541-32163618)
chr6 (23-166)||(11460011-11460146)
chr6 (33-163)||(17441168-17441298)
chr6 (23-97)||(9950826-9950900)
chr6 (27-66)||(13355722-13355761)
chr6 (23-157)||(18095519-18095653)
chr6 (23-157)||(18099816-18099950)
chr6 (19-97)||(27984956-27985034)
chr6 (35-96)||(22295928-22295989)
chr6 (23-65)||(12428887-12428929)
chr6 (23-65)||(21298913-21298955)
chr6 (19-154)||(9463363-9463498)
[»] scaffold0022 (1 HSPs)
scaffold0022 (19-154)||(124490-124625)
[»] scaffold0224 (1 HSPs)
scaffold0224 (21-163)||(7308-7450)
[»] scaffold0260 (2 HSPs)
scaffold0260 (14-154)||(11460-11600)
scaffold0260 (19-154)||(9985-10120)
[»] scaffold0171 (1 HSPs)
scaffold0171 (23-163)||(21088-21227)
[»] scaffold0204 (1 HSPs)
scaffold0204 (25-163)||(26621-26759)
[»] scaffold0223 (1 HSPs)
scaffold0223 (25-163)||(14428-14566)
[»] scaffold0025 (1 HSPs)
scaffold0025 (25-157)||(11392-11524)
[»] scaffold0954 (1 HSPs)
scaffold0954 (23-106)||(241-324)
[»] scaffold0444 (1 HSPs)
scaffold0444 (23-101)||(829-907)
[»] scaffold0135 (1 HSPs)
scaffold0135 (20-154)||(32794-32926)
[»] scaffold0192 (1 HSPs)
scaffold0192 (22-106)||(25623-25706)
[»] scaffold0063 (1 HSPs)
scaffold0063 (22-154)||(51311-51443)


Alignment Details
Target: chr1 (Bit Score: 142; Significance: 2e-74; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 47603011 - 47602862
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47603011 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 47602912  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47602911 agtcgaatgtcgaactataatcgagttggttcggttcattgtcagcccta 47602862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 24469966 - 24469817
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24469966 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 24469867  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  24469866 agtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 24469817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 32179849 - 32179999
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  32179849 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggtttatgaaccaagttcaacggattaaatatcg 32179948  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  32179949 agtcgaatgtcgaactataatcgagttggttcggttcattgccagccctaa 32179999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 14 - 165
Target Start/End: Original strand, 36419092 - 36419243
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  36419092 atatgtagctcaagttcagctcatttaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcgacggattaaatatcg 36419191  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  36419192 agtcgaatgtcgaactataatcgagttggttcggttcattgccagccctaat 36419243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 7702837 - 7702975
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7702837 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttagcttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 7702936  T
Q  125 gaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||||||||||||||||||||||| || |||||    
T  7702937 gaactataatcgagttggttcggttcattgccagcccta 7702975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 37441335 - 37441186
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37441335 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 37441236  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||| |||||||||||||||||| ||||| |||||||||||| || |||||    
T  37441235 agttgaatgtcgaactataatctagttgattcggttcattgccagcccta 37441186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 35810714 - 35810858
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||| ||||| ||| || |||||||||||||||||||||||| | |||| || |||||||||||||||||||||| || || | |||| |||    
T  35810714 tagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcg 35810813  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||  |||||| |||||||||||||||||||||||| || |||||    
T  35810814 aattacgaactttaatcgagttggttcggttcattgccagcccta 35810858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 25125025 - 25124885
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||| ||| || ||||| |||||||||||||||||| | |||| || |||||||||||||||||||||| || || |||| | ||||||     
T  25125025 tcaagttcagctcaattagttcacgaaattaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattatcaaatcgaatt 25124926  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     |||||| |||||||||||||||||||||||| || |||||    
T  25124925 acgaactttaatcgagttggttcggttcattgccagcccta 25124885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 50447337 - 50447481
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||||||||||| |||||||| ||||||||||||||||| || |||||| | |||| || ||||||| ||||||||| |||| ||||| |||||| |||    
T  50447337 tagttcaagttcaactcatttatttaacgaacttaattttaagttcaagttcggctcatttggttcataaaccaagtttaacgaattaattatcgaatcg 50447436  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    | | |||||||||  ||||||||||| |||||||||||| |||||    
T  50447437 agtctcgaactattttcgagttggtttggttcattgtcagcccta 50447481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 7596389 - 7596524
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||||||||| | |||| || ||||||| |||||||||| ||| || || |||||| ||     
T  7596389 tagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcataaaccaagttcgacgaatcaattatcgaatca 7596488  T
Q  119 aatgtcgaactataatcgagttggttcggttcattg 154  Q
    |||  |||||| ||||||||||||||||||||||||    
T  7596489 aattacgaactctaatcgagttggttcggttcattg 7596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 165
Target Start/End: Complemental strand, 46265093 - 46264942
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| |||||||||||||||||| ||| ||| ||||||||||||||||||||||| | |||| ||  ||||||||||||||||| ||| || || |||||    
T  46265093 atatatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttagttcatgaaccaagttcgacgaatcaattatcg 46264994  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
    | ||||||  |||||  ||||||| |||||||||||||||| || |||||||    
T  46264993 aatcgaattacgaacactaatcgaattggttcggttcattgccacccctaat 46264942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 42916256 - 42916114
Alignment:
Q  21 gttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 120  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||||||| | |||| || |||||||||||||||||| ||| || || |||||| |||||    
T  42916256 gttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaa 42916157  T
Q  121 tgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |  |||||  ||||||| |||||||||||||||| || |||||    
T  42916156 ttacgaacactaatcgaattggttcggttcattgccaccccta 42916114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 15306493 - 15306633
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||| ||||||||| |||| ||||||||||||| |||||||| |||||| || |||||||||||||||||||| | ||||| |||||| |||| |     
T  15306493 tcaagttcggctcatttatttaatgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgaattaattatcgaatcgagtt 15306592  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     ||||||||  || |||||||||||||||||| || |||||    
T  15306593 ccgaactattgtcaagttggttcggttcattgccagcccta 15306633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 20349137 - 20349277
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||| || |||  ||||| ||||||||||| ||||| |||||    
T  20349137 atatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaattatcg 20349236  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattg 154  Q
    |||| ||| |  ||||||  |||||||||||||||||||||    
T  20349237 agtcaaattttaaactatgttcgagttggttcggttcattg 20349277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 7995970 - 7996111
Alignment:
Q  22 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 121  Q
    |||||||| |||||||||| ||||||| ||||||||| | || |||| |  ||| ||||||| ||||||||||||||||| || || |||||| ||||||    
T  7995970 ttcaagttgagctcatttatttaacgagcttaattttaaacttaagttcgactcattaggtttatgaaccaagttcaacgaatcaattatcgaatcgaat 7996069  T
Q  122 gtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     |||||||||  || ||||||||||||||||||||| |||||    
T  7996070 ctcgaactattttcaagttggttcggttcattgtcaacccta 7996111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 28 - 164
Target Start/End: Original strand, 15014320 - 15014456
Alignment:
Q  28 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 127  Q
    ||||||||| |||||| | |||||||||||||| ||||||| | |||| || |||||||||| ||||||| ||| || || |||||| ||||||  ||||    
T  15014320 ttcagctcaattaattgatgaacttaattttcaactcaagttcggctcatttggttcatgaatcaagttcgacgaatcaattatcgaatcgaattacgaa 15014419  T
Q  128 ctataatcgagttggttcggttcattgtcatccctaa 164  Q
    || |||||||||||||||||||||||| || ||||||    
T  15014420 ctctaatcgagttggttcggttcattgccaaccctaa 15014456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 45581144 - 45581008
Alignment:
Q  27 gttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcga 126  Q
    ||||| |||||||| |||| ||||||||||||| |||||||| || ||| || ||||||||||||||||||||||   ||| |||||| |||| | ||||    
T  45581144 gttcatctcatttagttaatgaacttaattttccgctcaagttcaactcatttggttcatgaaccaagttcaacgagataattatcgaatcgagtttcga 45581045  T
Q  127 actataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||  || ||||||||||||||||||||| |||||    
T  45581044 actattttcaagttggttcggttcattgtcagcccta 45581008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 154
Target Start/End: Original strand, 28006350 - 28006481
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||  |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||||||||||||||||||||  | || |||||| ||||||     
T  28006350 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatc 28006449  T
Q  123 tcgaactataatcgagttggttcggttcattg 154  Q
    |||||||||  |||||||||||||||||||||    
T  28006450 tcgaactattttcgagttggttcggttcattg 28006481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 19508528 - 19508661
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||| ||| |||||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||||||| | ||| || |||||||| |     
T  19508528 tcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagtt 19508627  T
Q  123 tcgaactataatcgagttggttcggttcattgtc 156  Q
     |||||| || ||||||||  |||||||||||||    
T  19508628 ccgaactttattcgagttgtatcggttcattgtc 19508661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 23916810 - 23916950
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||| ||| || ||||||||||||||||||||||||   |||| || |||| ||||||||||||  | | || || |||||| ||||||     
T  23916810 tcaagttcagctcaattagttgacgaacttaattttcagctcaagttaggctcatttggttaatgaaccaagtttgatgaatcaattatcgaatcgaatt 23916909  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     |||||| |||||||||||||| |||||||||||| |||||    
T  23916910 acgaactttaatcgagttggtttggttcattgtcagcccta 23916950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 29677663 - 29677519
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||||||||||||| |||| || ||||||||||| ||||||| |  ||| || ||||| |||||||||||||||| |  || |||| | |||    
T  29677663 tagttcaagttcagctcatttatttaaagagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcaaatcg 29677564  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    | | |||||||||  ||||||||||||||||||||| || |||||    
T  29677563 agtatcgaactattttcgagttggttcggttcattgccagcccta 29677519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 20347662 - 20347797
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||| ||| ||||||||||||||||||||||||||||||||| || |||| | |||| || ||| |||||| ||| ||||||| ||||| | |||||||     
T  20347662 tagtacaaattcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattgtcgagtca 20347761  T
Q  119 aatgtcgaactataatcgagttggttcggttcattg 154  Q
    ||| |  ||||||| |||||||| ||||||||||||    
T  20347762 aattttaaactatattcgagttgattcggttcattg 20347797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 165
Target Start/End: Complemental strand, 38061327 - 38061176
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| ||||||||||||| |||||||| ||||||| ||||||||| | || |||| |  ||| |||||||||| || ||||||||||| || || ||||     
T  38061327 atatttagttcaagttcaactcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcataaatcaagttcaacgaatcaattatca 38061228  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
    | |||||| ||| |||||  ||||||||||||||||||||| || |||||||    
T  38061227 aatcgaatctcgcactattttcgagttggttcggttcattgccagccctaat 38061176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 14578703 - 14578585
Alignment:
Q  45 acgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtt 144  Q
    |||||||||||||||||||| ||| | |||| || |||||||||||||||||||||  || || | || | ||||||  |||||| ||||||||||||||    
T  14578703 acgaacttaattttcagctccagttcggctcatttggttcatgaaccaagttcaacaaatcaattgtctaatcgaattacgaactctaatcgagttggtt 14578604  T
Q  145 cggttcattgtcatcccta 163  Q
    ||||||||||||| |||||    
T  14578603 cggttcattgtcagcccta 14578585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 40159773 - 40159639
Alignment:
Q  20 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||| |  ||| || | |||||||||||||| ||| | |  || |||||| ||||    
T  40159773 agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttgattcatgaaccaagtccaatgaaccaattatcgaatcga 40159674  T
Q  120 atgtcgaactataatcgagttggttcggttcattg 154  Q
    || || ||||||  |||||||||||||||||||||    
T  40159673 atatcaaactattttcgagttggttcggttcattg 40159639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 44596527 - 44596657
Alignment:
Q  33 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactata 132  Q
    |||||||| |||||||||||||||||||| |||||| |||||| || |||||||||||||| |||||||  |||| | |||| |||| |  | ||||||     
T  44596527 ctcatttatttaacgaacttaattttcagttcaagttcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcgagttccaaactatt 44596626  T
Q  133 atcgagttggttcggttcattgtcatcccta 163  Q
     ||||||||||||||||||||| || |||||    
T  44596627 gtcgagttggttcggttcattgccagcccta 44596657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 163
Target Start/End: Complemental strand, 12224684 - 12224575
Alignment:
Q  54 attttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcatt 153  Q
    ||||||||||||||| | |||| || ||||||||||||||||||||||  |||| | |||| ||||||  ||||||||  ||||||||||||||||||||    
T  12224684 attttcagctcaagttcggctcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcatt 12224585  T
Q  154 gtcatcccta 163  Q
    |||| |||||    
T  12224584 gtcagcccta 12224575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 31869594 - 31869727
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||| ||||||||| |||||||||||||||||||||| |||| | |||| || ||||||||||||||||||||||  |||| | |||| || | |     
T  31869594 tcaagttcggctcatttatttaacgaacttaattttcagcttaagttcggctcatttggttcatgaaccaagttcaacgatttaattgtcgaatcaagtt 31869693  T
Q  123 tcgaactataatcgagttggttcggttcattgtc 156  Q
     ||||||||  |||| || |||||||||||||||    
T  31869694 ccgaactattgtcgaattagttcggttcattgtc 31869727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 35309607 - 35309668
Alignment:
Q  60 agctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 121  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35309607 agctcaagttcagctcgtgaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 35309668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 43087606 - 43087465
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| ||||||||||||||||||||||| || || |||||| | ||||||| |||||||||||||||||||||  | ||| || |||||||| |     
T  43087606 tcaagttcaactcatttaattaacgaacttaatctttagttcaagttcggctcgtttggttcatgaaccaagttcaacaaactaattaccgagtcgagtt 43087507  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
     |||||| || || |||||  || ||||||||||| ||||||    
T  43087506 ccgaactttattcaagttgtatcagttcattgtcagccctaa 43087465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 24575909 - 24576049
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||  |||||||| ||||| | ||||||||||| ||||||| |   || || ||||||||||||||||||||||  | || |||||| || |||     
T  24575909 tcaagttcgactcatttatttaacaagcttaattttcaactcaagttcgtttcatttggttcatgaaccaagttcaacgagtcaattatcgaatcaaatc 24576008  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||  |||||||||||||||||||||||| |||||    
T  24576009 tcgaactattttcgagttggttcggttcattgtcagcccta 24576049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 39802907 - 39802767
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||| |  ||| || ||||||||||||| |||||||| ||||| |  |||  ||| |     
T  39802907 tcaagttcggctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccatgttcaacgaattaactgccgaaccgagtc 39802808  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||  ||||||||||||| ||||||| || |||||    
T  39802807 tcgaactattttcgagttggttcgattcattgccagcccta 39802767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 42937074 - 42937214
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||| ||| || |||||||||||||| ||||||||| | |||| || | |||||||||||||||| ||| || || | | || ||||||     
T  42937074 tcaagttcagctcaattagttgacgaacttaattttaagctcaagttcggctcatttgattcatgaaccaagttcgacgaatcaattgttgaatcgaatt 42937173  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     |||||| ||||||||||||||| |||||||| || |||||    
T  42937174 acgaactctaatcgagttggttcagttcattgccagcccta 42937214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 5204610 - 5204479
Alignment:
Q  22 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 121  Q
    |||||||||  |||||||| ||||||||||||||||||| ||||||| |  ||| || |||||| |||||||||||||||  | || |||||| ||||||    
T  5204610 ttcaagttcgactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcacgaaccaagttcaacgagtcaattatcgaatcgaat 5204511  T
Q  122 gtcgaactataatcgagttggttcggttcatt 153  Q
     || ||||||  ||||||||||||| ||||||    
T  5204510 ctcaaactattttcgagttggttcgattcatt 5204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 23915737 - 23915606
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||||||| |||| ||||||||||||||||| |||| |||||| || ||||||||||||||||||||||   ||| | | || |||| |     
T  23915737 tcaagttcaactcatttatttaatgaacttaattttcagctaaagttcagctcatttggttcatgaaccaagttcaacgagataattgttgaatcgagtt 23915638  T
Q  123 tcgaactataatcgagttggttcggttcattg 154  Q
    ||||||| |  ||||||||||||| |||||||    
T  23915637 tcgaacttttgtcgagttggttcgattcattg 23915606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 31816568 - 31816702
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||| ||||||||| || |||| ||||||||||  || |||| || ||| || |||||||||||||||||||||| || || || ||| | || |     
T  31816568 tcaagttcggctcatttatttgacgagcttaattttcgactgaagttcaactcatttggttcatgaaccaagttcaacgaatcaattaccgaattgagtt 31816667  T
Q  123 tcgaactataatcgagttggttcggttcattgtca 157  Q
    |||||||||  ||||||||||||||||||||||||    
T  31816668 tcgaactattttcgagttggttcggttcattgtca 31816702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 45653580 - 45653440
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| ||||||| |||||| |||||||  |||||||||||| ||| ||||||||| | |||| || |||||||||||||||||||||| | ||| | |||    
T  45653580 atatatagttcatgttcagttcatttagctaacgaacttaacttttagctcaagttcggctcatttggttcatgaaccaagttcaacgaaataattgtcg 45653481  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgt 155  Q
    | |||| | | |||||||  ||||||||| ||||||||||||    
T  45653480 aatcgagttttgaactattttcgagttgg-tcggttcattgt 45653440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 15257314 - 15257171
Alignment:
Q  20 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    ||||||| |||| |||||||| ||||||| ||||||||||| ||||||| |  ||| || |||||||||||||||| ||| | |  || |||||| ||||    
T  15257314 agttcaaattcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcga 15257215  T
Q  120 atgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     | || ||||||  | |||||||||||||||||||||| |||||    
T  15257214 gtatcaaactatttttgagttggttcggttcattgtcagcccta 15257171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 42 - 164
Target Start/End: Complemental strand, 7016196 - 7016074
Alignment:
Q  42 ttaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttg 141  Q
    ||||| |||||| |||| ||||||||| |||||| || |||||||||||||||||||||  || || | |||| |||| | ||||| | |  ||||||||    
T  7016196 ttaacaaacttagttttgagctcaagttcagctcatttggttcatgaaccaagttcaacaaatcaattgtcgaatcgagtctcgaattttgttcgagttg 7016097  T
Q  142 gttcggttcattgtcatccctaa 164  Q
    |||||||||||||||| ||||||    
T  7016096 gttcggttcattgtcagccctaa 7016074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 47983257 - 47983395
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 124  Q
    ||||||| |||||||| |||||||  |||  ||| | ||||||| |  ||| || ||||| |||||||||||||||  || || |||||| |||||| ||    
T  47983257 aagttcaactcatttatttaacgagtttagattttaactcaagttcgactcatttggttcgtgaaccaagttcaacaaatcaattatcgaatcgaatctc 47983356  T
Q  125 gaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||  |||||||||||||||||||||||| |||||    
T  47983357 gaactattttcgagttggttcggttcattgtcaacccta 47983395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 21680805 - 21680656
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||||| | |||||| || ||||  |||||||||||||||| ||||||||| | |||| ||   ||||| ||||||||||||||   ||| |||||    
T  21680805 atatgtagtttatgttcagttcgtttagctaacgaacttaatttttagctcaagttcggctcatttcattcataaaccaagttcaacgagataattatcg 21680706  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    | |||| | |||||||||  ||||| ||||||||||||||| || |||||    
T  21680705 aatcgagtttcgaactattttcgagctggttcggttcattgccaacccta 21680656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 15662971 - 15663083
Alignment:
Q  45 acgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtt 144  Q
    |||||||||||||||||||||||| | |||| || ||| |||||||||||||| ||| || || ||| || | ||||  | |||| |||| |||||||||    
T  15662971 acgaacttaattttcagctcaagttcggctcatttggtacatgaaccaagttcgacgaatcaattattgaattgaattacaaactctaattgagttggtt 15663070  T
Q  145 cggttcattgtca 157  Q
    |||||||||||||    
T  15663071 cggttcattgtca 15663083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 27076659 - 27076515
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||||||||||| ||| |||| ||||||||||||| ||| ||||||||| | |||| ||  ||||||| ||||||||||||| ||||| |||||| ||     
T  27076659 tagttcaagttcaactcgtttatttaacgaacttaactttgagctcaagttcggctcatttagttcatggaccaagttcaacgaattaattatcgaatca 27076560  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    | | |  ||||||  || |||||||||  |||||||||| |||||    
T  27076559 agtcttaaactattttcaagttggttcaattcattgtcagcccta 27076515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 14796590 - 14796722
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 124  Q
    ||||||| |||||||| ||||||||||||||||  || |||||| || ||   | ||||||||||||| |||||||| ||||| ||||||||| | |  |    
T  14796590 aagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaattatcgagtcaagttcc 14796689  T
Q  125 gaactataatcgagttggttcggttcattgtca 157  Q
    ||||| | |||||||| | |||||| |||||||    
T  14796690 gaactttgatcgagttagctcggtttattgtca 14796722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 14805464 - 14805596
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 124  Q
    ||||||| |||||||| ||||||||||||||||  || |||||| || ||   | ||||||||||||| |||||||| ||||| ||||||||| | |  |    
T  14805464 aagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaattatcgagtcaagttcc 14805563  T
Q  125 gaactataatcgagttggttcggttcattgtca 157  Q
    ||||| | |||||||| | |||||| |||||||    
T  14805564 gaactttgatcgagttagctcggtttattgtca 14805596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 7841680 - 7841762
Alignment:
Q  80 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||||||||||||||| ||||| |||||| |||| | ||||| |||  ||||||||||||||||||||| || |||||    
T  7841680 ggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcgaa-tattttcgagttggttcggttcattgacagcccta 7841762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 7956321 - 7956466
Alignment:
Q  20 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    |||||||||||| |||||||| ||||| | |||||||||||  |||||| |  ||  ||  ||||||||||||||| ||| | |  || |||||| | ||    
T  7956321 agttcaagttcaactcatttatttaacaagcttaattttcaattcaagttcgactaattttgttcatgaaccaagtccaatgaaccaattatcgaattga 7956420  T
Q  120 atgtcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
     | |||||||||  ||||||||||||||||||||| || |||||||    
T  7956421 gtatcgaactattttcgagttggttcggttcattgccaaccctaat 7956466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 13645320 - 13645247
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagtt 96  Q
    |||| |||| |||||||| |||||||||||||| || ||||||||| | ||||||| | |||||||||||||||    
T  13645320 tcaaattcaactcatttacttaacgaacttaatctttagctcaagttcggctcgtttgattcatgaaccaagtt 13645247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 165
Target Start/End: Original strand, 14101864 - 14102005
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaatttt-cagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 123  Q
    |||||| |||| |||| |||||||| |||||||| |||||||| | |||||| || ||||||||||| |||||||| |   ||| | |||| |||| | |    
T  14101864 aagttcggctcgtttatttaacgaatttaatttttcagctcaaattcagctcatttggttcatgaactaagttcaatgagataattgtcgaatcgagttt 14101963  T
Q  124 cgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
     ||||||| ||| ||||||||||| ||||||||  |||||||    
T  14101964 ggaactattatcaagttggttcggatcattgtcggccctaat 14102005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 36119063 - 36119211
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| ||||||||||||||||| |||| ||||| ||||| ||||  | ||||||| ||| || || ||||||| |||||||||| |||    || | |||    
T  36119063 atatatagttcaagttcagctcgtttagttaacaaacttcatttgaa-ctcaagttcagttcatttggttcataaaccaagttcgacgagaaaattgtcg 36119161  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    | |||||| |||||||||  |  ||||||||||||||||||||| |||||    
T  36119162 aatcgaatttcgaactattttttagttggttcggttcattgtcagcccta 36119211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 14770656 - 14770580
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaa 99  Q
    |||||||||||||| ||| || |||||||||||||| || |||||| | |||| || ||||||| ||||||||||||    
T  14770656 tcaagttcagctcaattagttcacgaacttaatttttagatcaagttcggctcatttggttcataaaccaagttcaa 14770580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 48575220 - 48575136
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaa 107  Q
    ||||||||| |||||||| || |||||||||||||| |  |||||| |   ||||| |||||||||||||||||||||| |||||    
T  48575220 tcaagttcaactcatttatttgacgaacttaattttaaattcaagttcgattcgtttggttcatgaaccaagttcaacgaattaa 48575136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 3577670 - 3577805
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaag-tccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 121  Q
    |||||||||||||||||| |||||||| | | ||||||||||||| |  |  || || | ||||||||||||||||||||  |||| | |||| |||| |    
T  3577670 tcaagttcagctcatttatttaacgaattaatttttcagctcaagttttaattcatttgattcatgaaccaagttcaacgagttaactgtcgaatcgagt 3577769  T
Q  122 gtcgaactataatcgagttggttcggttcattgtca 157  Q
      | ||||||  ||||||| ||||||||||||||||    
T  3577770 tccaaactattgtcgagttagttcggttcattgtca 3577805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 6413296 - 6413379
Alignment:
Q  80 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||||||||||| |||||||| || || |||| | |||||| |||||||||  ||||||||||||| ||||||| || |||||    
T  6413296 ggttcatgaaccaggttcaacgaatcaattatcaaatcgaatctcgaactattttcgagttggttcgattcattgccagcccta 6413379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 51432343 - 51432265
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 101  Q
    |||||||||||| ||||| |||||||  ||||||||||||| || | || ||| || |||||||||||||||| |||||    
T  51432343 tcaagttcagctaatttatttaacgattttaattttcagcttaatttcaactcatttggttcatgaaccaagtacaacg 51432265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 30251422 - 30251565
Alignment:
Q  21 gttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 120  Q
    ||||||||||||   ||||| ||||||||||||||||| ||||||||| ||  || ||  |||||||||||||  ||||||  |||| |||||| || |     
T  30251422 gttcaagttcaggaaatttagttaacgaacttaatttttagctcaagttcaattcatttagttcatgaaccaaactcaacgagttaattatcgaatcaag 30251521  T
Q  121 tgtcgaactat-aatcgagttggttcggttcattgtcatcccta 163  Q
    | | |||||||   |||| |||||| |||||||||||| |||||    
T  30251522 ttttgaactatgtttcgaattggtttggttcattgtcaacccta 30251565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 33233707 - 33233645
Alignment:
Q  6 gtcgaaaaatatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagt 68  Q
    ||||||| |||| ||| ||||||| | ||| |||| ||||||| |||||||||||||||||||    
T  33233707 gtcgaaacatatatagctcaagttaaactcgtttagttaacgaccttaattttcagctcaagt 33233645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 1e-72; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 14 - 164
Target Start/End: Complemental strand, 5776279 - 5776129
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5776279 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 5776180  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  5776179 agtcgaatgtcgaactataatcgagttggttcggttcattgccaaccctaa 5776129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 37334274 - 37334423
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37334274 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 37334373  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    | |||||||||||||||||||||||||||||||||||||||||| |||||    
T  37334374 aatcgaatgtcgaactataatcgagttggttcggttcattgtcaacccta 37334423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 5795085 - 5794936
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5795085 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 5794986  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  5794985 agtcgaatgtcgaactataatcgggttggttcggttcattgccagcccta 5794936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 665996 - 665847
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  665996 atatgtagctcaaattcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaatttaacggattaaatatcg 665897  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  665896 agtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 665847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 43052868 - 43053017
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43052868 atatgtagctcaagttcagctcatctaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcaacggattaaatatcg 43052967  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  43052968 agtcgaatgtcgaactataatcgagttggttcggttcattgccaacccta 43053017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 3930865 - 3930725
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  3930865 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatggaccaagttcaacggattagatatcg 3930766  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattg 154  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  3930765 agtcgaatgtcgaactataatcgagttgtttcggttcattg 3930725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 14 - 164
Target Start/End: Complemental strand, 28949907 - 28949757
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  28949907 atatgtagctcaagttcagctcatttaattaacgaacttaatttttagctcaattccagctcgttaggttcatgaaccaagttcaacggattagatatcg 28949808  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
    |||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  28949807 agtcgaatgtcgaactataatcgagttgattcggttcattgccagccctaa 28949757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 36926995 - 36927135
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  36926995 atatgtagctcaagttcaactcatttaattaacgaacttaatttttagctcaagtccaactcgttaggttcatgaaccaagttcaacggattagatatcg 36927094  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattg 154  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36927095 agtcgaatgtcgaactataatcgagttggttcggttcattg 36927135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 42072079 - 42072228
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  42072079 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaacggattagatatcg 42072178  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    | ||||||||| |||||||||||||||| |||||| |||||||| |||||    
T  42072179 aatcgaatgtcaaactataatcgagttgtttcggtacattgtcagcccta 42072228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 45176241 - 45176382
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  45176241 atatgtagctcaagttcaactcatttaattaacgaacttaattttcagctaaagttcagctcgtttggttcatgaaccaagttcaacggattaattatcg 45176340  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgt 155  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  45176341 agtcgaatgtcaaactataatcgagtttgttcggttcattgt 45176382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 48505937 - 48505795
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |    
T  48505937 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggttcatgaaccaagttcaacggattagatattg 48505838  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |       |||||||||||||||||||||||||||||||||||| |||||    
T  48505837 a-------gtcgaactataatcgagttggttcggttcattgtcagcccta 48505795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 26216268 - 26216410
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26216268 atatgtagctcaagttcagctcctttaattaacgaacttaattttcagctcaagtccagctcgttaggttcataaaccaagttcaacggattaaatatcg 26216367  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
           || |||||||||||| |||||||||||||||||| || |||||    
T  26216368 -------tgacgaactataatcaagttggttcggttcattgccagcccta 26216410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 388988 - 389082
Alignment:
Q  60 agctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 154  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  388988 agctcaagttcagctcgttaggttcatgaaccaagttcaacggattaaatatcgagttgaatgtcgaactataatcgagttgattcggttcattg 389082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 20400992 - 20401141
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||  ||||||||||||||||||||||| ||||||||| || ||||||||| ||| ||  |||||||||||||||| ||||| ||| ||| || ||    
T  20400992 atatgtaactcaagttcagctcatttaattaaagaacttaatatttagctcaagttcagttcagtaggttcatgaaccaaattcaatggactaattaccg 20401091  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  20401092 agtcgaatttcgaactatattcgagttggttcggttcattgtcaacccta 20401141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 7447877 - 7448021
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| | |||| || |||||||||||||||||||| | |  || | ||||||||    
T  7447877 tagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcg 7447976  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||   |||||||| |||||||||||||||||||||||| |||||    
T  7447977 aattatgaactatattcgagttggttcggttcattgtcagcccta 7448021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 3942181 - 3942321
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||  | || || |||||||||||||||||||| | || || | |||| ||||||     
T  3942181 tcaagttcagctcaattaattcacgaacttaattttcagctcaagtctggttcatttggttcatgaaccaagttcaatgaatcaactgtcgaatcgaatt 3942280  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     |||||| ||||||||||||||||||||||||||| |||||    
T  3942281 acgaactttaatcgagttggttcggttcattgtcagcccta 3942321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 15434241 - 15434315
Alignment:
Q  16 atgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 90  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15434241 atgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 15434315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 33935513 - 33935654
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||  |||| |||||| |||| |     
T  33935513 tcaagttcatctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattatcgaatcgagtc 33935612  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
     | ||||||  ||||||||||||| ||||||| || ||||||    
T  33935613 ccaaactattgtcgagttggttcgattcattgccagccctaa 33935654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 44422042 - 44421901
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaa-ttttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 121  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||  |||| | |||| |||| |    
T  44422042 tcaagttcagctcatttgtttaacgaacttaaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagt 44421943  T
Q  122 gtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
      | ||||||  ||||||||||||||||||||| || |||||    
T  44421942 cccaaactattgtcgagttggttcggttcattgacagcccta 44421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 22075068 - 22075208
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||| || ||||| ||||||| ||||||||  |||| | |||| |||| |     
T  22075068 tcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttcgtgaaccacgttcaacgagttaattgtcgaatcgagtt 22075167  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
       |||||| |||||||||||||||||||||| || |||||    
T  22075168 ctaaactattatcgagttggttcggttcattgccagcccta 22075208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 10618926 - 10619055
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||  |||||||||||||||||||||  |||| | |||| |||| |     
T  10618926 tcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttagttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 10619025  T
Q  123 tcgaactataatcgagttggttcggttcat 152  Q
     | ||||||  |||||||| ||||||||||    
T  10619026 ccaaactattgtcgagttgattcggttcat 10619055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 11595936 - 11595796
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||| ||| |||||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||||||| | ||| || |||||||| |     
T  11595936 tcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagtt 11595837  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     |||||| || ||||||||  |||||||||||||| |||||    
T  11595836 ccgaactttattcgagttgtatcggttcattgtcagcccta 11595796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 33124700 - 33124840
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| ||  || || ||||||| ||||||||||||||  |||| | |||| |||| |     
T  33124700 tcaaattcagctcatttatttaacgaacttaattttcagctcaagttcaattcatttggttcataaaccaagttcaacgagttaattgtcgaatcgagtt 33124799  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    || ||||||  ||||||||||||||||||||| || |||||    
T  33124800 tcaaactattgtcgagttggttcggttcattgccagcccta 33124840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 165
Target Start/End: Complemental strand, 33899082 - 33898942
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 124  Q
    ||||||| |||||||| ||||||| ||||||||||| ||||||| |  ||| || |||||||||||||||| ||| | | ||| | |||| |||||| ||    
T  33899082 aagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaactaattctcgaatcgaatatc 33898983  T
Q  125 gaactataatcgagttggttcggttcattgtcatccctaat 165  Q
    |||||||  |||||||||||||||||||||||| |||||||    
T  33898982 gaactattttcgagttggttcggttcattgtcagccctaat 33898942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 18250137 - 18250002
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||||||||||| |||||||| ||||||| | ||||||||| ||||||| |  ||| || |||||||||||||||||||||| || || |||||| |||    
T  18250137 tagttcaagttcaactcatttatttaacgagcataattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattatcgaatcg 18250038  T
Q  119 aatgtcgaactataatcgagttggttcggttcattg 154  Q
    | | | |||||||  |||||||||||||||||||||    
T  18250037 agtcttgaactattttcgagttggttcggttcattg 18250002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 154
Target Start/End: Original strand, 45055733 - 45055864
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||||||| | ||| || |||||||| |     
T  45055733 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagtt 45055832  T
Q  123 tcgaactataatcgagttggttcggttcattg 154  Q
     |||||| || ||||||||  |||||||||||    
T  45055833 ccgaactttattcgagttgtatcggttcattg 45055864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 26719817 - 26719954
Alignment:
Q  20 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||| |  ||| || |||||||||||||||| ||| | |  || |||||| ||||    
T  26719817 agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcga 26719916  T
Q  120 atgtcgaactataatcgagttggttcggttcattgtca 157  Q
     | |||||||||  ||||||||||||| ||||||||||    
T  26719917 gtatcgaactattttcgagttggttcgattcattgtca 26719954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 222366 - 222226
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||||||  |||||||| ||||||||||| |||||| ||||||||| |||||||||||||| |||||||  |||| | |||| || | |     
T  222366 tcaagttcagctcatttgtttaacgaatttaattttcagttcaagttcagctcgtttggttcatgaaccaaattcaacgagttaattgtcgaatcaagtc 222267  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     | ||||||  ||||||||||||||||||||| || |||||    
T  222266 ccaaactattgtcgagttggttcggttcattgccagcccta 222226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 17025501 - 17025358
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||  |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| ||||||||||||||||  | || |||||| |||||      
T  17025501 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgagtcaattatcgaatcgaacc 17025402  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccctaata 166  Q
    | |||||||  |||||||||||||||||||||||| ||||||||    
T  17025401 ttgaactattttcgagttggttcggttcattgtcagccctaata 17025358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 153
Target Start/End: Complemental strand, 23227139 - 23227009
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||||| || | |||||| ||||||||||||    ||| | |||| |||| |     
T  23227139 tcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagtt 23227040  T
Q  123 tcgaactataatcgagttggttcggttcatt 153  Q
    |||||||||  |||||||||||||| |||||    
T  23227039 tcgaactattgtcgagttggttcggatcatt 23227009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 153
Target Start/End: Complemental strand, 23236292 - 23236162
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||||| || | |||||| ||||||||||||    ||| | |||| |||| |     
T  23236292 tcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagtt 23236193  T
Q  123 tcgaactataatcgagttggttcggttcatt 153  Q
    |||||||||  |||||||||||||| |||||    
T  23236192 tcgaactattgtcgagttggttcggatcatt 23236162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 36472442 - 36472584
Alignment:
Q  21 gttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 120  Q
    ||||||||||| || ||||| ||||||| ||||||||||| ||||||| | |||| || |||||||||||||||||||||| || |  |||||| ||||     
T  36472442 gttcaagttcaacttatttatttaacgagcttaattttcaactcaagttcggctcatttggttcatgaaccaagttcaacgaatcatttatcgaatcgag 36472541  T
Q  121 tgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    | || |  |||  |||||||||||||||||||||||| |||||    
T  36472542 tatcaagttattttcgagttggttcggttcattgtcagcccta 36472584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 49034373 - 49034224
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||||||||||||  |||||||| || |||| ||||||||||| ||||||| |  ||| || |||||||||||||||||||||| |  || || ||    
T  49034373 atatgtagttcaagttcgactcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccg 49034274  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    | |||||| |||||||||  ||||||||| ||||||| ||| || |||||    
T  49034273 aatcgaatttcgaactattttcgagttggatcggttcgttgccagcccta 49034224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 21760723 - 21760581
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||||||| |||||||  ||| |||||| ||||||| |  ||| || ||||| ||||| |||||||||| || || |||||| |||| |     
T  21760723 tcaagttcaactcatttatttaacgagtttagttttcaactcaagttcgactcatttggttcgtgaacaaagttcaacgaatcaattatcgaatcgagtt 21760624  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
    |||||||||  |||||||||||||||||||| ||| |||||||    
T  21760623 tcgaactattttcgagttggttcggttcattatcagccctaat 21760581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 46573752 - 46573610
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||  |||||||| ||||||| ||||||||||| || |||| |  ||| || ||||||||||||||||||||||  | || |||||| ||||||     
T  46573752 tcaagttcgactcatttatttaacgagcttaattttcaacttaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatc 46573653  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
    ||||| |||  | ||||||||||||||||||| || |||||||    
T  46573652 tcgaattatttttgagttggttcggttcattgccagccctaat 46573610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 46652765 - 46652647
Alignment:
Q  31 agctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaacta 130  Q
    |||||||||||||||| ||||||||| | || | |||| ||||   ||||||||||||||||||| |||| |||||| |||||| |||||| ||||||||    
T  46652765 agctcatttaattaacaaacttaattcttagtttaagttcagcatattaggttcatgaaccaagtccaacagattaattatcgaatcgaatttcgaacta 46652666  T
Q  131 taatcgagttggttcggtt 149  Q
    || |||| ||||| |||||    
T  46652665 tattcgaattggtccggtt 46652647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 164
Target Start/End: Original strand, 32356962 - 32357107
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||| ||||||| ||| |||| ||||||||||| ||||||| ||||| | | |||| ||  ||||||||| ||||||||||| ||||| |||||| |||    
T  32356962 tagtttaagttcaactcgtttacttaacgaactttattttcaactcaaattcggctcatttagttcatgaatcaagttcaacgaattaattatcgaatcg 32357061  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
    | | |||||||||  |  |||||||| |||||||||||| ||||||    
T  32357062 agtctcgaactatttttaagttggtttggttcattgtcagccctaa 32357107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 37401706 - 37401566
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||| ||||||||| ||| || |||||||||||||||| |||||||   |||| || |||||||||| ||||||||||  || || | |||| ||||||     
T  37401706 tcaacttcagctcaattagttgacgaacttaattttcaactcaagtttggctcatttggttcatgaatcaagttcaacaaatcaattttcgaatcgaatt 37401607  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     |||||| ||||||| |||||| |||||||||||| |||||    
T  37401606 acgaactctaatcgaattggtttggttcattgtcagcccta 37401566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 18740358 - 18740227
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||  |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||||||||||||||| || |  | || |||| | ||||||     
T  18740358 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtttaatgagtcaattatcaaatcgaatc 18740259  T
Q  123 tcgaactataatcgagttggttcggttcattg 154  Q
    |||||||||  |||||||||||||||||||||    
T  18740258 tcgaactattttcgagttggttcggttcattg 18740227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 33171674 - 33171532
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||| ||||||||| |||| |||||||||||| ||||||||| |||||| || ||||||| || ||||||||||    ||| | ||   |||| |     
T  33171674 tcaagttcggctcatttatttaatgaacttaatttttagctcaagttcagctcatttggttcataaatcaagttcaacaagataattgtcttatcgagtt 33171575  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
    ||||||||| ||||||||||||||| |||||| || |||||||    
T  33171574 tcgaactattatcgagttggttcggatcattgccagccctaat 33171532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 35543697 - 35543549
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||||||||||| |||||||| |   ||| ||||||||||| ||||||| |  ||| ||  ||||||||||||||||||||| || || |||||| | |    
T  35543697 tagttcaagttcaactcatttatt---cgagcttaattttcaactcaagttcgactcatttagttcatgaaccaagttcaacgaatcaattatcgaatgg 35543601  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatccctaatatcca 170  Q
    | | || ||||||  ||||||||||||| |||||||||| ||||| ||||||    
T  35543600 agtctcaaactattttcgagttggttcgattcattgtcagccctactatcca 35543549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 48634462 - 48634530
Alignment:
Q  33 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 101  Q
    |||||||| ||||||||||||||||| ||||||||| || ||| || ||||||||||||||||||||||    
T  48634462 ctcatttatttaacgaacttaatttttagctcaagttcaactcatttggttcatgaaccaagttcaacg 48634530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 23237657 - 23237574
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggatta 106  Q
    ||||||||| |||||||||||||||||||||||| | | ||||||| | |||  ||||||||||||||||||| ||||| ||||    
T  23237657 tcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaacgaatta 23237574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 164
Target Start/End: Original strand, 37106853 - 37106972
Alignment:
Q  45 acgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtt 144  Q
    |||||||||||||| ||||||||| | |||| || ||| ||| ||| |||||| ||| ||||| |||||| ||||||  |||||| |||| |||| ||||    
T  37106853 acgaacttaatttttagctcaagttcggctcatttggtacattaactaagttcgacgaattaattatcgaatcgaattacgaactctaattgagtcggtt 37106952  T
Q  145 cggttcattgtcatccctaa 164  Q
    |||||||||| || ||||||    
T  37106953 cggttcattgccaaccctaa 37106972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 40480191 - 40480112
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcg-ttaggttcatgaaccaagttcaacg 101  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||| | ||||| || ||||||||||||||||||||||    
T  40480191 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttttggttcatgaaccaagttcaacg 40480112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 31491816 - 31491954
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||||||||||| || ||||| |||||||||||||| || || | |||| |  ||| || ||||||||   ||||||||||| ||||| |||||| |||    
T  31491816 tagttcaagttcaactaatttatttaacgaacttaatattgagtttaagttcgactcatttggttcatgtgtcaagttcaacgaattaattatcgaatcg 31491915  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtca 157  Q
    ||| || ||||||  | |||||| |||||||||||||||    
T  31491916 aatctcaaactatttttgagttgattcggttcattgtca 31491954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 10096467 - 10096550
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttc 97  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||   | |||||| || ||| || ||||||||||||||||||    
T  10096467 atatgtagtttaagttcagctcatttagttagcgaacttaatttctcgttcaagttcaactcatttggttcatgaaccaagttc 10096550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 17608717 - 17608847
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||| ||| || ||||||||||||||||| |||||| | |||| || ||||||| |||||||||| ||| || |   || || ||||||     
T  17608717 tcaagttcaactcaattagttgacgaacttaattttcagatcaagttcggctcatttggttcatcaaccaagttcgacgaatca---attgaatcgaatt 17608813  T
Q  123 tcgaactataatcgagttggttcggttcattgtc 156  Q
     |||||| | ||||||||| ||||||||||||||    
T  17608814 acgaacttttatcgagttgattcggttcattgtc 17608847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 2466661 - 2466579
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaag-tccagctcgttaggttcatgaaccaagttcaac 100  Q
    ||||| ||||| |||||||||| |||||||||| ||||||||||||||| |  ||||| ||| |||| |||||||||||||||    
T  2466661 tagtttaagtttagctcatttatttaacgaactaaattttcagctcaagttttagctcattaagttcgtgaaccaagttcaac 2466579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 27231657 - 27231539
Alignment:
Q  45 acgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtt 144  Q
    ||||||||||||||||| |||||| | |||| || | | |||||| ||||||| ||| || || |||||| ||||||  |||||| ||||  || |||||    
T  27231657 acgaacttaattttcagttcaagttcggctcatttgatacatgaatcaagttcgacgaatcaattatcgaatcgaattacgaactctaattaagctggtt 27231558  T
Q  145 cggttcattgtcatcccta 163  Q
    ||||||||||||| |||||    
T  27231557 cggttcattgtcagcccta 27231539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 29527382 - 29527436
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagt 68  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  29527382 atatatagttcaagtttagctcatttaattaacgaacttaatttacagctgaagt 29527436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 37250030 - 37250107
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaacc 91  Q
    |||| ||||||||||| |||||| ||  |||||||| |||||||||||||||||| | |||| || ||||||| ||||    
T  37250030 atatttagttcaagtttagctcacttggttaacgaaattaattttcagctcaagtgcggctcatttggttcattaacc 37250107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 41449756 - 41449884
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||| ||||| |||||||| |||||||||||||||           || || |||||||||||||||||||   ||| | |||| |||| |     
T  41449756 tcaagttcagctaatttatttaacgaatttaattttcagctca-----------tttggatcatgaaccaagttcaacgagataattgtcgaatcgagtt 41449844  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccct 162  Q
    |||||||||  |||||||||||||| ||||||||| ||||    
T  41449845 tcgaactattgtcgagttggttcggatcattgtcagccct 41449884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 49001137 - 49001081
Alignment:
Q  12 aaatatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagt 68  Q
    |||||| |||||||||||| | | ||||| |||||||||||||||||||| ||||||    
T  49001137 aaatatatagttcaagttcggttgatttagttaacgaacttaattttcagttcaagt 49001081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 33019369 - 33019440
Alignment:
Q  86 tgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtca 157  Q
    |||||||||||||||| |  || |||||| |||| | |||||||||  | ||||||||||||||||||||||    
T  33019369 tgaaccaagttcaacgaaccaattatcgaatcgagtatcgaactatttttgagttggttcggttcattgtca 33019440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 15434312 - 15434350
Alignment:
Q  125 gaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||||||||||||||||||||||| || |||||    
T  15434312 gaactataatcgagttggttcggttcattgccagcccta 15434350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 37239840 - 37239910
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagt 95  Q
    ||||||| ||||||| |||||| ||||| ||||| ||||||| | || ||| || ||||||||||||||||    
T  37239840 aagttcaactcatttgattaacaaacttgattttaagctcaaattcatctcatttggttcatgaaccaagt 37239910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 23223594 - 23223561
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaatt 56  Q
    ||||||||| ||||||||||||||||||||||||    
T  23223594 tcaagttcaactcatttaattaacgaacttaatt 23223561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 44994104 - 44994059
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagt 68  Q
    |||| ||||||||| ||| ||| |||||||||||||||||||||||    
T  44994104 tcaaattcagctcaattagttagcgaacttaattttcagctcaagt 44994059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 29037929 - 29037845
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttca 98  Q
    |||| ||||| || |||| |||||||  |||||| |||||||||||| ||||||| |  ||| || ||||||||||| |||||||    
T  29037929 atatatagtttaaattcaactcatttgtttaacggacttaattttcaactcaagttcgtctcatttggttcatgaacaaagttca 29037845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 1e-72; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 21441572 - 21441722
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21441572 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 21441671  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21441672 agtcgaatgtcgaactataatcgagttggttcggttcattgtcaaccctaa 21441722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 14 - 165
Target Start/End: Original strand, 53369863 - 53370014
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53369863 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 53369962  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
    ||| ||||||||||||||||||||||||||||||||||||| || |||||||    
T  53369963 agttgaatgtcgaactataatcgagttggttcggttcattgccagccctaat 53370014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 50605999 - 50606148
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50605999 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 50606098  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||    
T  50606099 agtcgaatgtcgaactataatcgaattggttcggttcattgccagcccta 50606148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 12789701 - 12789552
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  12789701 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagttcagctcgttaggttcataaaccaagttcaacggattagatatcg 12789602  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  12789601 agtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 12789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 19852969 - 19853118
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19852969 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccatctcgttaggttcatgaaccaagttcaacggattaaatatcg 19853068  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||||||||| ||||||||||||||||||||| ||||||| || |||||    
T  19853069 agtcgaatgtcaaactataatcgagttggttcgattcattgacagcccta 19853118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 45674826 - 45674975
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  45674826 atatgtagctcaagttcaactcatttaattaacgaatttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcgacggattagatatcg 45674925  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  45674926 agtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 45674975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 44791392 - 44791256
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  44791392 atatgtagctcaaattcagctcatttaattaacgaacttaattttcagttcaagtgcagctcgttaggttcatgaaccaagttcaacggattagatatcg 44791293  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttc 150  Q
    |||||||||||||||||||||||||||||||||||||    
T  44791292 agtcgaatgtcgaactataatcgagttggttcggttc 44791256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 48977567 - 48977717
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||| |||||||||| |||||||||||    
T  48977567 atatgtagctcaagttcagctcatttaattaacgaatttaattttcagctcatgtccagctcattaggttcatgaacgaagttcaacgaattaaatatcg 48977666  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
    |||||||||||||| |||||||||||||||||||||||||| || ||||||    
T  48977667 agtcgaatgtcgaattataatcgagttggttcggttcattgccagccctaa 48977717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 49820973 - 49821075
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49820973 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 49821072  T
Q  114 agt 116  Q
    |||    
T  49821073 agt 49821075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 9469773 - 9469919
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||   |||| || ||||||||||||||||||||  ||  || | ||||||||    
T  9469773 tagttcaagttcagctcatttaatcaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaatagaccaattgtcgagtcg 9469872  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
    |||  ||||||||| |||||||||||||||||||||||| |||||||    
T  9469873 aattacgaactatattcgagttggttcggttcattgtcagccctaat 9469919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 36543777 - 36543921
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||  || |||||||||||||||||||| |||  || | ||||||||    
T  36543777 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggcttatttggttcatgaaccaagttcaatggaccaattgtcgagtcg 36543876  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||  ||||||||| |||||||||||| ||||||||||| |||||    
T  36543877 aattacgaactatattcgagttggttcagttcattgtcagcccta 36543921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 22184500 - 22184645
Alignment:
Q  20 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||  |||| | |||| ||||    
T  22184500 agttcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcga 22184599  T
Q  120 atgtcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
     |  | ||||||  ||||||||||||||||||||| || |||||||    
T  22184600 gtcccaaactattgtcgagttggttcggttcattgccagccctaat 22184645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 36156438 - 36156300
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||||||||| ||| || |||||||||||||||||||||||| | |||| || |||||| ||||||||||||||| || || | |||| |||    
T  36156438 tagttcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcaagaaccaagttcaacgaatcaattgtcgaatcg 36156339  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtca 157  Q
    |||  |||||| |||||||||||||||||||||||||||    
T  36156338 aattacgaactttaatcgagttggttcggttcattgtca 36156300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 48731314 - 48731173
Alignment:
Q  22 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 121  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||| ||| |  || |||||||||||||| ||||| |||  || | |||||||||||    
T  48731314 ttcaagtacagctcatttaattaacgaacttaatttttagctcaagttcagtttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 48731215  T
Q  122 gtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     |||||||||| ||||||||||||||||||||| || |||||    
T  48731214 ttcgaactatattcgagttggttcggttcattggcagcccta 48731173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 11055366 - 11055226
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||| |||||| || |||||||||||||||||||| |  |||| |||||| |||| |     
T  11055366 tcaagttcggctcatttatttaacgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcgaatcgagtt 11055267  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     ||||||||  |||||||||||||||||||||||| |||||    
T  11055266 ccgaactattgtcgagttggttcggttcattgtcagcccta 11055226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 26632927 - 26633067
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    ||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| || |||| |||| ||||||||||||  |||| | |||    
T  26632927 atatgtaattcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttaatgagccaagttcaacgagttaattgtcg 26633026  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattg 154  Q
    | |||| |  |||||||| ||||||||||||||||||||||    
T  26633027 aatcgagttacgaactattatcgagttggttcggttcattg 26633067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 51995074 - 51995209
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||||||||||| ||| |||| ||||| ||||||||||| ||||||||| | |||| || |||||||||||||||||||||| ||||| |||||| |||    
T  51995074 tagttcaagttcaactcgtttatttaacaaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcaacgaattaattatcgaatcg 51995173  T
Q  119 aatgtcgaactataatcgagttggttcggttcattg 154  Q
    | | |||||||||  |||||||||||||||||||||    
T  51995174 agtctcgaactattttcgagttggttcggttcattg 51995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 21273935 - 21273861
Alignment:
Q  258 tctaatcctagtttattatactccctaatttaagatttcgaagtatttaatttatttcttgtaatacttgttata 332  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21273935 tctaatcctagtttattatactccctaatgtaagatttcgaagtatttaatttatttcttgtaatacttgttata 21273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 165
Target Start/End: Original strand, 56224136 - 56224287
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| ||||||||||||| || |||||||||||||| |||||||||||||||||| | |||| || |||| || |||||||||||||| ||||| | | |    
T  56224136 atatatagttcaagttcaacttatttaattaacgaatttaattttcagctcaagttcggctcatttggtttattaaccaagttcaacgaattaattgttg 56224235  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
    |||| | | |||||||||  | |||||||||||||||||||||| |||||||    
T  56224236 agtcaagtttcgaactatgtttgagttggttcggttcattgtcagccctaat 56224287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 49083374 - 49083240
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||| || ||| ||||||| |||||||||||||||| || ||| ||||||||| |||     
T  49083374 tcaagtacagctcatttaattaacgaatttaattttcagatcaagttcaactcattaggtttatgaaccaagttcaacagactaattatcgagtccaatt 49083275  T
Q  123 tcgaactataatcgagttggttcggttcattgtca 157  Q
    || ||||||  || |||||||||| ||||||||||    
T  49083274 tcaaactattctcaagttggttcgattcattgtca 49083240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 24008052 - 24007903
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| ||| ||||||||| |||||||| ||||||||||||||||| | |||||||  | ||||||||||||||||||||||||||||| || ||  |||     
T  24008052 atatttagctcaagttcaactcatttatttaacgaacttaattttaaactcaagtttaactcgttaggttcatgaaccaagttcaacgaatcaatcatca 24007953  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    | |||||| |||||||||  ||||||||||||  |||||||||| |||||    
T  24007952 aatcgaatctcgaactattttcgagttggttcaattcattgtcagcccta 24007903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 50147056 - 50146927
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 124  Q
    |||||||||||| ||| || |||||||||||||||||||||||||| | || || |||||||||||||||||||||| || || | |||| ||||||  |    
T  50147056 aagttcagctcaattagttcacgaacttaattttcagctcaagtccggttcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattac 50146957  T
Q  125 gaactataatcgagttggttcggttcattg 154  Q
    ||||| ||||||| ||||||||||||||||    
T  50146956 gaactttaatcgaattggttcggttcattg 50146927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 52813601 - 52813742
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||||||  |||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||  |||| | || | | || |     
T  52813601 tcaagttcagctcatttgtttaacgaacttaattttcagcttaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcaaatagagtc 52813700  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
     | ||||||  |||||||||||||||||||||||| ||||||    
T  52813701 ccaaactattgtcgagttggttcggttcattgtcaaccctaa 52813742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 15697227 - 15697083
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||||| |||||||||||| | ||||||||||||||||| ||||||||| |||||  || |||||||||| ||||||||||| || || | ||||||||    
T  15697227 tagttcatgttcagctcattaagttaacgaacttaatttttagctcaagttcagcttatttggttcatgaatcaagttcaacgaatcaattgtcgagtcg 15697128  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    | | ||||||| || ||||||||  |||||||||||||| |||||    
T  15697127 agtctcgaactttattcgagttgtctcggttcattgtcagcccta 15697083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 53369679 - 53369740
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctc 75  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53369679 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctc 53369740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 12673168 - 12673037
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||  |||||||| |||| || ||||||||||| ||||||| |  ||| || ||||||||||||||||||||||  | || |||||| ||||||     
T  12673168 tcaagttcgactcatttatttaatgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatc 12673069  T
Q  123 tcgaactataatcgagttggttcggttcattg 154  Q
    |||||||||  |||||||||||||||||||||    
T  12673068 tcgaactattttcgagttggttcggttcattg 12673037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 13455697 - 13455843
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||||||||||| ||| |||| ||||||||||||||||| |||||||||    ||| || ||||||| || ||||||||||| ||||| |||||| |||    
T  13455697 tagttcaagttcaactcgtttatttaacgaacttaattttgagctcaagttggactcatttggttcataaatcaagttcaacgaattaattatcgaatcg 13455796  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
    ||| || || |||  || ||||||||||||| ||||||| |||||||    
T  13455797 aatctcaaattattttcaagttggttcggtttattgtcagccctaat 13455843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 163
Target Start/End: Original strand, 80492 - 80637
Alignment:
Q  18 gtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtc 117  Q
    ||||||||||||| ||||||||| || |||| ||||||||||| ||||||| |  ||| || |||||||||||||||||||||| |  || || ||| ||    
T  80492 gtagttcaagttcggctcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatc 80591  T
Q  118 gaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     ||| |||||||||  ||||||||| ||||||||||| || |||||    
T  80592 aaatttcgaactattttcgagttggatcggttcattgccagcccta 80637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 6866243 - 6866109
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||| ||| || |||||||||||||||||||||||| | |||| || |||||||||||||||||  ||| || || |||||| || |       
T  6866243 tcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagtttgacgaatcaattatcgaatcaa--- 6866147  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
       |||| ||||||||||||||||||||||||||| |||||    
T  6866146 ---aactttaatcgagttggttcggttcattgtcaacccta 6866109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 46944684 - 46944541
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||  || ||||| ||||||| ||||| ||||| ||||||| |  ||| || ||||||||||||||||||||||    || |||||| ||||||     
T  46944684 tcaagttcgacttatttatttaacgagcttaaatttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagccaattatcgaatcgaatc 46944585  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccctaata 166  Q
    |||||||||  | |||||||||||||||||||||| ||||||||    
T  46944584 tcgaactatttttgagttggttcggttcattgtcagccctaata 46944541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 1803489 - 1803638
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| ||||||||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||||||||||||| |||||| |||| || || ||       
T  1803489 atatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagtttaacgaatcaatta--- 1803585  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaatatc 168  Q
      |||||| ||| ||| |  |||||||||||||||||||||||| ||||||||||    
T  1803586 --tcgaatctcgcactcttttcgagttggttcggttcattgtcagccctaatatc 1803638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 32397842 - 32397704
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||||||||| ||| || |||||||||||||| || |||||| | |||  || | ||||||||||||||||  || || || | ||||||||    
T  32397842 tagttcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggcttatttgattcatgaaccaagttcggcgaatcaattgtcgagtcg 32397743  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtca 157  Q
    |||  |||||| ||||||| ||||||||||| |||||||    
T  32397742 aattacgaactttaatcgaattggttcggtttattgtca 32397704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 40797827 - 40797961
Alignment:
Q  20 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    |||||||||||| |||||||| ||||||| ||||||||||| ||||||| |  ||| || |||||||||||||||||||| | |  || |||||| || |    
T  40797827 agttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaatgaaccaattatcgaatcaa 40797926  T
Q  120 atgtcgaactataatcgagttggttcggttcattg 154  Q
     | |||||||||  | |||||||||||||||||||    
T  40797927 gtatcgaactatttttgagttggttcggttcattg 40797961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 48339237 - 48339099
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 124  Q
    |||||||||||| ||| || |||||||||||||||||||||||| |  ||| || | |||||||||||||||||||  || |  | |||| ||||||  |    
T  48339237 aagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattac 48339138  T
Q  125 gaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||| |||| ||||||||||| |||||||||| |||||    
T  48339137 gaactctaattgagttggttcgattcattgtcagcccta 48339099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 52706217 - 52706359
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||| | ||||||| ||||||||||||||||| |||| | ||| || |||||| | |     
T  52706217 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtttaacgaactaattaccgagtcaagtt 52706316  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
     |||| | || ||||||||  ||||||||||| || |||||||    
T  52706317 ccgaattttattcgagttgtatcggttcattgccagccctaat 52706359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 55892125 - 55891985
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||||||  || |||||||||||||| | | || || |  |||||| |||||||||||||||||||||| ||||| || ||| |||| |     
T  55892125 tcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcgtttggttcatgaaccaagttcaacgaattaattaccgaatcgagtc 55892026  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||  | |||||||||| ||||||||||| |||||    
T  55892025 tcgaactatttttgagttggttcagttcattgtcagcccta 55891985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 7505529 - 7505668
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||||||| |||||||| |||||||| ||||||||| | |||| || |||||||||| ||||||||||| | ||| || |||||| | |     
T  7505529 tcaagttcaactcatttagttaacgaatttaatttttagctcaagttcggctcatttggttcatgaatcaagttcaacgaactaattaccgagtcaagtt 7505628  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccct 162  Q
      ||||| || ||||||||  |||||||||||||| ||||    
T  7505629 ctgaactttattcgagttgtatcggttcattgtcagccct 7505668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 19455298 - 19455159
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| ||||||||  |||| ||||||||||||| ||||||| |||||| || | |||||||||||||||||||| ||||| | || | |||| |     
T  19455298 tcaagttcaactcatttagataacaaacttaattttcaactcaagttcagctcatttgattcatgaaccaagttcaacgaattaattgtcaaatcgagtt 19455199  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccct 162  Q
    |||||||||  |||| |  | |||||||||||||| ||||    
T  19455198 tcgaactattttcgaataagctcggttcattgtcagccct 19455159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 157
Target Start/End: Original strand, 27891386 - 27891520
Alignment:
Q  22 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 121  Q
    ||||| ||||||||||||| ||||| || || ||||||||||||||| |||||| ||  |||||||||||||||||||||  |||| | |||| |||| |    
T  27891386 ttcaaattcagctcatttatttaacaaatttgattttcagctcaagttcagctcatt-tgttcatgaaccaagttcaacgagttaattgtcgaatcgagt 27891484  T
Q  122 gtcgaactataatcgagttggttcggttcattgtca 157  Q
      ||||||||  |||||||| |||| ||||||||||    
T  27891485 tccgaactattgtcgagttgattcgattcattgtca 27891520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 51408091 - 51407949
Alignment:
Q  21 gttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 120  Q
    ||||||||||| |||||||  || |||||||||||||| | | || || |  ||| || ||||||||||||||||| |||| ||||| || ||| ||||     
T  51408091 gttcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcatttggttcatgaaccaagttgaacgaattaattaccgaatcgag 51407992  T
Q  121 tgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    | |||||||||  |||||||||||| ||||||||||| |||||    
T  51407991 tctcgaactattttcgagttggttcagttcattgtcagcccta 51407949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 49405775 - 49405634
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||| ||||||||| || |||| ||||||||||   |||||| |  ||| || ||||||| |||||||||||||| || || || ||| |||| |     
T  49405775 tcaagttcggctcatttatttgacgagcttaattttcgattcaagttcgactcatttggttcataaaccaagttcaacgaatcaattaccgaatcgagtt 49405676  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
    |||||||||  ||| |||||||||||||||||||| ||||||    
T  49405675 tcgaactattttcgggttggttcggttcattgtcagccctaa 49405634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 165
Target Start/End: Complemental strand, 52733838 - 52733699
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 124  Q
    ||||||| || ||||| ||||||||||||||||||||||||| | || ||| || ||||||||||  || |||||||  |||| |||||| || ||| ||    
T  52733838 aagttcaacttatttatttaacgaacttaattttcagctcaa-ttcaactcatttggttcatgaattaaattcaacgagttaattatcgaatcaaatttc 52733740  T
Q  125 gaactataatcgagttggttcggttcattgtcatccctaat 165  Q
    ||| ||| ||  ||||||||| ||||||||||||| |||||    
T  52733739 gaattattattaagttggttcagttcattgtcatctctaat 52733699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 25134571 - 25134646
Alignment:
Q  20 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagt 95  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||| |  ||| || ||||||||||||||||    
T  25134571 agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagt 25134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 146
Target Start/End: Complemental strand, 48151266 - 48151143
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||  || ||||| ||||||||||||||||||||||||||| |||||| || ||||  |||||||||||||||    ||| | |||| |||| |     
T  48151266 tcaagttcgacttatttatttaacgaacttaattttcagctcaagttcagctcatttggtttgtgaaccaagttcaacaagataattgtcgaatcgagtt 48151167  T
Q  123 tcgaactataatcgagttggttcg 146  Q
    |||||||||  |||||||||||||    
T  48151166 tcgaactattgtcgagttggttcg 48151143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 28265763 - 28265673
Alignment:
Q  73 ctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||| |||||||||||||||||||||| ||||| || ||| |||| | |||||||||  |||||||||||| |||||||| || |||||    
T  28265763 ctcgtttggttcatgaaccaagttcaacgaattaattaccgaatcgagtctcgaactattttcgagttggttcagttcattgccagcccta 28265673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 43812201 - 43812123
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttc 97  Q
    |||||||||||||||||| ||| || ||||||||||||||||| | |||| | || | || ||||||||||||||||||    
T  43812201 tagttcaagttcagctcaattagtttacgaacttaattttcagtttaagttcggcccatttggttcatgaaccaagttc 43812123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 44378250 - 44378328
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 101  Q
    ||||||||| |||||||| ||||||| ||||||||||| | ||| | || ||| || ||||||||||||||||||||||    
T  44378250 tcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaacg 44378328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 22721328 - 22721403
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaa 99  Q
    ||||||||| |||||||| ||||||||||||||||| |||| ||||    |||||| ||||||||||||||||||||    
T  22721328 tcaagttcaactcatttatttaacgaacttaatttt-agcttaagtttgcctcgtttggttcatgaaccaagttcaa 22721403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 9222273 - 9222141
Alignment:
Q  20 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    ||||||||||||  ||||||| ||||||| |||||||| || ||||||| |  ||| || |||   |||||||||||||||| |  || | |||| ||||    
T  9222273 agttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggtg--tgaaccaagttcaacgaaccaattgtcgaatcga 9222176  T
Q  120 atgtcgaactataatcgagttggttcggttcattg 154  Q
     | |||||||||  |||||||||||||||||||||    
T  9222175 gtatcgaactattttcgagttggttcggttcattg 9222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 5762693 - 5762588
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| ||||| ||| ||||| |||||| |||||||| ||||||||||||||||   || ||| || |||||||||||||||||| ||| | ||||  |||    
T  5762693 atatatagttgaagctcagc-catttatttaacgaatttaattttcagctcaaactcaactcatttggttcatgaaccaagttcgacgaactaaaagtcg 5762595  T
Q  114 agtcgaa 120  Q
    |||||||    
T  5762594 agtcgaa 5762588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 5769263 - 5769158
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| ||||| ||| ||||| |||||| |||||||| |||||||||||||||| | || | | || |||||||||||||||||| ||| | ||||  |||    
T  5769263 atatatagttgaagctcagc-catttatttaacgaatttaattttcagctcaaattcaacccatttggttcatgaaccaagttcgacgaactaaaagtcg 5769165  T
Q  114 agtcgaa 120  Q
    |||||||    
T  5769164 agtcgaa 5769158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 9959343 - 9959471
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||| ||||| ||||||||||||||||||||||||           || | ||||||||| ||||||||||  |||  ||| || |||| |     
T  9959343 tcaagttcagcttatttatttaacgaacttaattttcagctca-----------tttgattcatgaac-aagttcaacgagttatttatagaatcgagtt 9959430  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||  |||||||||||||||||||||||| |||||    
T  9959431 tcgaactattgtcgagttggttcggttcattgtcagcccta 9959471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 16742465 - 16742423
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctca 65  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  16742465 tcaagttcagctcatttatttaacgaacttaattttcaactca 16742423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 38493117 - 38493075
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctca 65  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  38493117 tcaagttcaactcatttaattaacaaacttaattttcagctca 38493075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 48802616 - 48802474
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgag-tcgaat 121  Q
    |||||||| ||||||||| || |||| ||||||||||  ||||||| |  ||| || |||||||||| |||||||||   | | |||| | |  |||| |    
T  48802616 tcaagttcggctcatttatttgacgagcttaattttcgactcaagttcgactcatttggttcatgaatcaagttcaaaaaaatcaataaccaaatcgagt 48802517  T
Q  122 gtcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
     |||||||||  |||||||||||||||||||||||| ||||||    
T  48802516 ttcgaactattttcgagttggttcggttcattgtcagccctaa 48802474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 13761824 - 13761877
Alignment:
Q  48 aacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 101  Q
    ||||||||||||||||||| | |||||| || |||||||||||||||| |||||    
T  13761824 aacttaattttcagctcaaattcagctcatttggttcatgaaccaagtccaacg 13761877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 24550077 - 24550182
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcat-gaaccaagttcaacggattaaatatcgagtcgaat 121  Q
    ||||||||| |||||||| ||||| ||||||||||| ||||||||| || |||  | |||| ||  || ||||||||||| || || || ||||||||||    
T  24550077 tcaagttcaactcatttagttaacaaacttaatttttagctcaagttcaactcagttggtttataaaatcaagttcaacgaatcaattaccgagtcgaat 24550176  T
Q  122 gtcgaa 127  Q
    ||||||    
T  24550177 gtcgaa 24550182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 163
Target Start/End: Original strand, 38791728 - 38791831
Alignment:
Q  59 cagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcat 158  Q
    |||||||||| |||||| || ||||||||||||||||||||||  |||| | |||| | | ||  | ||||||  ||||||||||||||||||||| ||     
T  38791728 cagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaattg-attccaaactattgtcgagttggttcggttcattgccag 38791826  T
Q  159 cccta 163  Q
    |||||    
T  38791827 cccta 38791831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 41822102 - 41822153
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctca 65  Q
    |||| ||||| |||||||||||||||| ||||| ||||||||||||| ||||    
T  41822102 atatatagtttaagttcagctcatttagttaacaaacttaattttcaactca 41822153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 5764702 - 5764616
Alignment:
Q  34 tcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 120  Q
    ||||||| |||||||| ||||||||||||||||   || ||  || |||||||||||||||||| ||| | ||||  ||||||||||    
T  5764702 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaagttcgacgaactaaaagtcgagtcgaa 5764616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 5766946 - 5766860
Alignment:
Q  34 tcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 120  Q
    ||||||| |||||||| ||||||||||||||||   || ||  || |||||||||||||||||| ||| | ||||  ||||||||||    
T  5766946 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaagttcgacgaactaaaagtcgagtcgaa 5766860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 9874291 - 9874214
Alignment:
Q  80 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtca 157  Q
    |||||||| ||||| ||||||| ||||| ||  || |||||| | |||||||  | ||||||||||||||||||||||    
T  9874291 ggttcatgtaccaatttcaacgaattaattactgaatcgaatcttgaactatttttgagttggttcggttcattgtca 9874214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 4e-72; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 32689160 - 32689309
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32689160 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 32689259  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32689260 agtcgaatgtcgaactataatcgagttggttcggttcattgtcagcccta 32689309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 41609879 - 41610018
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41609879 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 41609978  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattg 154  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  41609979 agtcgaatgtcgaactataatcgagttgg-tcggttcattg 41610018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 23206456 - 23206317
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||     
T  23206456 atatgtagcttaagttcagctcatttaattaa-gaacttaattttcagctcaagtccagctcgttaggttcatgaacaaagttcaacagattaaatatca 23206358  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattg 154  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23206357 agtcgaatgtcgaactataatcgagttggttcggttcattg 23206317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 39942940 - 39942809
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||||||||| || ||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||||| |  ||| ||||||     
T  39942940 tcaagttcagctcatctatttaacgaacttaattttcagctcaagttcagctcattaagttcatgaaccaagttcaacagattaattgccgaatcgaatt 39942841  T
Q  123 tcgaactataatcgagttggttcggttcattg 154  Q
    |||||||||| |||||||||||| ||||||||    
T  39942840 tcgaactatactcgagttggttcagttcattg 39942809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 52199429 - 52199570
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| | |||| |||| |     
T  52199429 tcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgaattaattgtcgaatcgagtc 52199528  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
     | ||||||  ||||||||||||| |||||||||| ||||||    
T  52199529 ccaaactattgtcgagttggttcgattcattgtcagccctaa 52199570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 39469672 - 39469531
Alignment:
Q  22 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 121  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| | |||| || | |||||||||||||||||| |||  || |||||| ||||||    
T  39469672 ttcaagtttagctcatttaattaacgaacttaattttcagctcaagttcggctcatttgattcatgaaccaagttcaatggaccaattatcgaatcgaat 39469573  T
Q  122 gtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
      ||||||||| |||||||||||| ||||||| ||| |||||    
T  39469572 tacgaactatattcgagttggttcagttcattatcagcccta 39469531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 9505261 - 9505121
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || ||| || ||||||||||||||||||||||  |||| | |||| |||| |     
T  9505261 tcaagttcagctcatttatttaacgaacttaattttcagctcaagttcaactcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 9505162  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     ||||||||  ||||||||||||||||||||| || |||||    
T  9505161 ccgaactattgtcgagttggttcggttcattgccagcccta 9505121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 39135350 - 39135494
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| | |||| || |||||||||||||||||||| | |  || | ||||||||    
T  39135350 tagtttaagttcagctcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcg 39135449  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||   |||||||| |||||||||||||||| |||| || |||||    
T  39135450 aattatgaactatattcgagttggttcggtttattgccagcccta 39135494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 46293357 - 46293213
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||| | |||| || |||||||||||||| |||||  ||  || | || |||||    
T  46293357 tagtttaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaaattcaattgaccaattgtcaagtcg 46293258  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||| | |||||||| |||||||| ||||||||||||||| |||||    
T  46293257 aattttgaactatattcgagttgattcggttcattgtcagcccta 46293213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 54393587 - 54393443
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||| ||||| ||| || |||||||||||||||||||||||| | |||| || |||| ||||||||||||||||| || || | |||| |||    
T  54393587 tagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggtttatgaaccaagttcaacgaatcaattgtcgaatcg 54393488  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||  |||||| |||||||||||||||||||||||| || |||||    
T  54393487 aattacgaactttaatcgagttggttcggttcattgccagcccta 54393443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 19560914 - 19560774
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||| ||||||||| |||||| |||||| | | | ||||||| ||||| |||  ||||||||||||||||||||| ||||| | |||||||||||     
T  19560914 tcaagttcggctcatttatttaacggacttaactcttaactcaagttcagcttgtttcgttcatgaaccaagttcaacgaattaattgtcgagtcgaatt 19560815  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     ||||||||| ||||||||||||||||||||| || |||||    
T  19560814 ccgaactatattcgagttggttcggttcattgccagcccta 19560774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 33438875 - 33438731
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||| || |||||| ||| || |||||||||||||||||||||||| |  ||| || |||||||||||||||||||||| || || | |||| |||    
T  33438875 tagttcaactttagctcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcg 33438776  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||  | |||| ||||||||||||||||||||||||||| |||||    
T  33438775 aattacaaactttaatcgagttggttcggttcattgtcagcccta 33438731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 25253704 - 25253842
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 124  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||| |||||| || |||||||||||||||||||||   || | | ||||||||| |  |    
T  25253704 aagttcggctcatttatttaacgaacttaatttttagctcaagttcagctcatttggttcatgaaccaagttcaacaagtttattgtcgagtcgagttcc 25253803  T
Q  125 gaactataatcgagttggttcggttcattgtcatcccta 163  Q
     ||||||| ||||||||||||||||||||| || |||||    
T  25253804 aaactatattcgagttggttcggttcattgccagcccta 25253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 44574517 - 44574666
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||| ||||||||||| ||||||||| ||||| | ||||||| |||||| ||||||||| |||| |||||||||| ||||| |  ||    
T  44574517 atatgtagctcaagttcggctcatttaataaacgaacttgatttttaactcaagttcagctcattaggttcacgaactaagttcaacgaattaattgccg 44574616  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||||   |||||||||| ||||||||  ||||||||||| || |||||    
T  44574617 agtcgagcttcgaactatattcgagttgtctcggttcattgccagcccta 44574666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 12710702 - 12710842
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||  |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||||||||||||||||||||  | || |||||| ||||||     
T  12710702 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatc 12710801  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||  ||||||||||||||||||||| || |||||    
T  12710802 tcgaactattttcgagttggttcggttcattgccagcccta 12710842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 52934803 - 52934943
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| ||| |||||||| ||||||||| |||||||||||||||||| |||||||| |||||| || |||||||||||||||||||| |  |||| |||||    
T  52934803 atatatagatcaagttcggctcatttatttaacgaacttaattttctgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcg 52934902  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattg 154  Q
    | |||| |  ||||||||  || ||||||||| ||||||||    
T  52934903 aatcgagttccgaactattgtcaagttggttcagttcattg 52934943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 30662271 - 30662130
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||  |||||||| ||||||| ||||||||||| ||||||| |  ||| || | ||||||||||||||||||||  | || |||||| ||||||     
T  30662271 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacgagtcaattatcgaatcgaatc 30662172  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
    || ||||||  |||||||||||||| ||||||||| ||||||    
T  30662171 tcaaactattttcgagttggttcggctcattgtcagccctaa 30662130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 18074567 - 18074708
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| ||| |||| ||||||||||||| |||||||||||||||||||| |||| | || ||| ||  ||||||||| ||| ||||||| ||||| ||||     
T  18074567 atatatagctcaatttcagctcatttagttaacgaacttaattttcagttcaaattcaactcatttagttcatgaaacaaattcaacgaattaattatca 18074666  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgt 155  Q
    | |||| | ||||||| || ||||||||| || |||||||||    
T  18074667 aatcgagtctcgaactctattcgagttggctcagttcattgt 18074708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 50965394 - 50965474
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaa-ttttcagctcaagtccagctcgttaggttcatgaaccaa 93  Q
    |||| ||| |||||||||||||||||| ||||||||||||| |||||||||||| | |||||| |||||||||||||||||    
T  50965394 atatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaa 50965474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 51068529 - 51068609
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaa-ttttcagctcaagtccagctcgttaggttcatgaaccaa 93  Q
    |||| ||| |||||||||||||||||| ||||||||||||| |||||||||||| | |||||| |||||||||||||||||    
T  51068529 atatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaa 51068609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 20550346 - 20550211
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||| || |||||||| |||||||| |||||||||| |||| || |  ||| || ||||| |||||||||||||||  || || |||||| |||    
T  20550346 tagttcaagtacaactcatttatttaacgaatttaattttcaactcatgttcgactcatttggttcgtgaaccaagttcaacaaatcaattatcgaatcg 20550247  T
Q  119 aatgtcgaactataatcgagttggttcggttcattg 154  Q
    | | |||||||||  ||||||||||| |||||||||    
T  20550246 agtatcgaactattttcgagttggtttggttcattg 20550211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 26049680 - 26049549
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||  || ||||| ||||||| ||||||||||| ||||||| |  ||| || | ||||||||||||||||||| | | || |||||| ||||||     
T  26049680 tcaagttcgactaatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacaggtcaattatcgaatcgaatc 26049581  T
Q  123 tcgaactataatcgagttggttcggttcattg 154  Q
    || ||||||  |||||||||||||||||||||    
T  26049580 tcaaactattttcgagttggttcggttcattg 26049549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 154
Target Start/End: Original strand, 28242583 - 28242714
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||| ||||||| |||||||| |||||||||||||||| | |||||| || |||||||||||||| |||||||  |||| | |||| || | |     
T  28242583 tcaagttcagatcatttatttaacgaatttaattttcagctcaaattcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcaagtt 28242682  T
Q  123 tcgaactataatcgagttggttcggttcattg 154  Q
     |||| |||  |||||||| ||||||||||||    
T  28242683 ccgaattattgtcgagttgattcggttcattg 28242714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 40943558 - 40943701
Alignment:
Q  20 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    |||||||||||| |||||||| ||||||| ||||||||||| ||||||| |  ||| || |||||||||||||||| ||| | |  || |||| | ||||    
T  40943558 agttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcaaatcga 40943657  T
Q  120 atgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     | |||||||||  |||||||||||||||| |||| || |||||    
T  40943658 gtatcgaactattttcgagttggttcggtttattgccagcccta 40943701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 5418678 - 5418755
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 100  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||| |  |||||| ||||||||||| |||||||||    
T  5418678 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaac 5418755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 30743593 - 30743702
Alignment:
Q  44 aacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggt 143  Q
    ||||||||||||| ||| ||||| | |||||| || ||||||||||||||||||||||  || |   |||||||||    ||||||||| ||||||||||    
T  30743593 aacgaacttaattctcaactcaaattcagctcatttggttcatgaaccaagttcaacgagttcatcttcgagtcgagctccgaactatattcgagttggt 30743692  T
Q  144 tcggttcatt 153  Q
    ||||||||||    
T  30743693 tcggttcatt 30743702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 52199389 - 52199441
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctc 75  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  52199389 tcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctc 52199441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 28687074 - 28687149
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 100  Q
    ||||| ||||| |||| ||||||||||||||||||||||||| |  ||| |||  |||||||||||||||||||||    
T  28687074 aagttgagctcgtttatttaacgaacttaattttcagctcaaatttagcccgtctggttcatgaaccaagttcaac 28687149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 53529747 - 53529685
Alignment:
Q  6 gtcgaaaaatatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagt 68  Q
    |||||| || || |||||||||||||||||| ||| || ||||||||||||||||||||||||    
T  53529747 gtcgaacaacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagt 53529685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 153
Target Start/End: Original strand, 1674629 - 1674759
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||| ||||| |||||  ||  ||||||||||| |||| || ||| || |||||||||||||||||||||    ||| | | || ||||||     
T  1674629 tcaagttcagcttatttatttaacatacaaaattttcagcttaagttcaactcatttggttcatgaaccaagttcaacaagataattgttgaatcgaatt 1674728  T
Q  123 tcgaactataatcgagttggttcggttcatt 153  Q
      |||||||  ||||||||||||||||||||    
T  1674729 ctgaactattgtcgagttggttcggttcatt 1674759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 55452799 - 55452670
Alignment:
Q  33 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactata 132  Q
    |||||||| ||||||||||||| ||| |||| || || | |||||| |||||||||||||||||||||   | || | |||||| |||| || |||| ||    
T  55452799 ctcatttagttaacgaacttaagttttagcttaattcaa-ctcgtttggttcatgaaccaagttcaactcgtcaattgtcgagttgaatctcaaacttta 55452701  T
Q  133 atcgagttggttcggttcattgtcatcccta 163  Q
    || ||||||| || |||||||| || |||||    
T  55452700 attgagttggctcagttcattgccaacccta 55452670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 15822490 - 15822381
Alignment:
Q  22 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 121  Q
    ||||||||| ||||||||| || |||| ||||||||||| ||||||| |  |||  | || ||||||||||||||||||| |  || || ||| ||||||    
T  15822490 ttcaagttcggctcatttatttgacgagcttaattttcaactcaagttctactcaattggatcatgaaccaagttcaacgaaacaattaccgaatcgaat 15822391  T
Q  122 gtcgaactat 131  Q
     |||||||||    
T  15822390 ttcgaactat 15822381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 26136324 - 26136467
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||||| | ||||| |||||||  ||||| ||| ||||||| | ||||||| | ||||  |  |||||| |||||||||||||  | ||| || ||    
T  26136324 atatgtagtttatgttcaactcatttgtttaacaaacataattttgaactcaagttcggctcacttagttcataaaccaagttcaacaaactaattaacg 26136423  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtca 157  Q
    | |||| | || |||||| ||| |||||||| ||||||||||||    
T  26136424 aatcgagtctcaaactattatcaagttggttgggttcattgtca 26136467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 54432334 - 54432259
Alignment:
Q  20 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagt 95  Q
    |||||||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||  |||||||||||||||    
T  54432334 agttcaagttcaactcatttatttaacgagcttaatttttaactcaagttcgactcatttagttcatgaaccaagt 54432259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 36917952 - 36917867
Alignment:
Q  34 tcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    |||||||||| |||||||||||||| | || || | || |||||| |||| |||||||| ||||||||  |||| | |||||||||    
T  36917952 tcatttaattcacgaacttaatttttaacttaattacaactcgttgggtttatgaaccacgttcaacgacttaattgtcgagtcga 36917867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 45714758 - 45714827
Alignment:
Q  85 atgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 154  Q
    ||||| ||||||||||| || || | |||| ||||||  |||||| ||||||||||||||| ||||||||    
T  45714758 atgaatcaagttcaacgaatcaattgtcgaatcgaataacgaactttaatcgagttggttcagttcattg 45714827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 1072849 - 1072753
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    |||||||||| |||||  |||||| |||||||||||| ||||||   || ||| || |||||||||||  ||| ||||| || || |||||||||||    
T  1072849 tcaagttcagttcattatattaacaaacttaattttcggctcaaactcaactcatttggttcatgaacttagtccaacgaatcaattatcgagtcga 1072753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 37269063 - 37269107
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaatttt 58  Q
    |||| |||||||||||||  ||||||| |||||||||||||||||    
T  37269063 atatatagttcaagttcacttcatttagttaacgaacttaatttt 37269107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 3e-70; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 33831486 - 33831640
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  33831486 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaattcaacggattagatatcg 33831585  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaatatc 168  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  33831586 agtcgaatgtcgaactataatcgagttggttcggttcattgccagccctaatatc 33831640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 27634662 - 27634811
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27634662 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacggattaaatatcg 27634761  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  27634762 agtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 27634811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 36538647 - 36538796
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  36538647 atatgtagctcaagtttagctcatttaattaacgaacttaattttcagctcaagtccaactcgttaggttcatgaaccaagttcaacggattagatatcg 36538746  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  36538747 agtcgaatgtcgaactataatcgagttggtttggttcattgtcagcccta 36538796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 41959134 - 41959283
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  41959134 atatgtagcttatgttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaacggattagatatcg 41959233  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  41959234 agtcgaatgtcgaactataatcgagttgattcggttcattgtcagcccta 41959283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 34064696 - 34064833
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |    
T  34064696 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacggattagatattg 34064795  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttca 151  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  34064796 agtcgaatgtcgaactataattgagttggttcggttca 34064833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 26436345 - 26436484
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  26436345 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcacgttcagctcgttaggttcatgaaccaagttcaacggattaaatatcg 26436444  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattg 154  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  26436445 agtcgaatgtc-aattataatcgagttggttcggttcattg 26436484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 33164110 - 33163990
Alignment:
Q  33 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactata 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33164110 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactata 33164011  T
Q  133 atcgagttggttcggttcatt 153  Q
    ||||| |||||||||||||||    
T  33164010 atcgaattggttcggttcatt 33163990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 3409328 - 3409188
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||| | |||| |||| |     
T  3409328 tcaaattcagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 3409229  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||  ||||||||||||||||||||| || |||||    
T  3409228 tcgaactattgtcgagttggttcggttcattgccagcccta 3409188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 44740623 - 44740492
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||  |||| | |||| |||| |     
T  44740623 tcaagttcagctcatttgtttaacgaacttaatttttagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtc 44740524  T
Q  123 tcgaactataatcgagttggttcggttcattg 154  Q
     | ||||||  |||||||||||||||||||||    
T  44740523 ccaaactattgtcgagttggttcggttcattg 44740492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 157
Target Start/End: Complemental strand, 24844804 - 24844672
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 124  Q
    |||||||||||||||| ||| |||| |||||||||||||||||| |||||| || ||||||||||||||||||||||   ||| |  ||| |||| | ||    
T  24844804 aagttcagctcatttatttatcgaatttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagataattgccgaatcgagtttc 24844705  T
Q  125 gaactataatcgagttggttcggttcattgtca 157  Q
    ||||||| ||||||||||||||| |||||||||    
T  24844704 gaactattatcgagttggttcggatcattgtca 24844672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 11027908 - 11028048
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||| ||| || |||||||||||||| || |||||| | |||| || |||||||||||||||||| ||| || || |||||| | ||||     
T  11027908 tcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaattgaatt 11028007  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     |||||| |||| ||||||||||||||||||| || |||||    
T  11028008 acgaactctaattgagttggttcggttcattgccagcccta 11028048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 154
Target Start/End: Original strand, 30713156 - 30713287
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||| ||| || |||||||||| |||||||||| || | |||| || |||||||||||||||||| ||| || || |||||| ||||||     
T  30713156 tcaagttcaactcaattagttgacgaacttaaatttcagctcatgttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaatt 30713255  T
Q  123 tcgaactataatcgagttggttcggttcattg 154  Q
     |||||  ||||||||||||||||||||||||    
T  30713256 acgaacactaatcgagttggttcggttcattg 30713287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 2647114 - 2647018
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||| | ||||||| |||||||||||||||||||||| | ||| || ||||||||    
T  2647114 tcaagttcaacttatttagttaacgaacttaatttttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcga 2647018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 157
Target Start/End: Complemental strand, 11007113 - 11006980
Alignment:
Q  22 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 121  Q
    |||||||||| |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||||||||||||| || || |||||  ||||      
T  11007113 ttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaatcaattatcggatcga-- 11007016  T
Q  122 gtcgaactataatcgagttggttcggttcattgtca 157  Q
    ||| ||||||  ||||||||||||||||||||||||    
T  11007015 gtcaaactattttcgagttggttcggttcattgtca 11006980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 40458917 - 40459061
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||||||||||||  |  || ||| || |||    
T  40458917 tagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattattgaatcg 40459016  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    | | || ||||||  || ||||||||||||||||||||| |||||    
T  40459017 agtatcaaactattttcaagttggttcggttcattgtcagcccta 40459061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 34116313 - 34116173
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||| ||| ||| ||||||||||||| ||||||||| | |||| || ||||||||||| |||||| ||  || || |||  | ||||||     
T  34116313 tcaagttcagctcaattatttagcgaacttaattttaagctcaagttcggctcatttggttcatgaactaagttcgacaaatcaattattaaatcgaatt 34116214  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     |||||| ||||||||||||||||| |||||| || |||||    
T  34116213 acgaactctaatcgagttggttcggctcattgccaccccta 34116173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 41332243 - 41332362
Alignment:
Q  35 catttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataat 134  Q
    |||||| ||||| ||||||||||||||||||| | || |||  | |||| ||||||||||||||||   |||| | |||| |||| | |||||||||| |    
T  41332243 catttatttaacaaacttaattttcagctcaaattcaactcaattggtttatgaaccaagttcaacaagttaattgtcgaatcgagtttcgaactatatt 41332342  T
Q  135 cgagttggttcggttcattg 154  Q
    |||||||||| |||||||||    
T  41332343 cgagttggtttggttcattg 41332362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 9963759 - 9963837
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 101  Q
    ||||||||||||||||||  |||||||||||||||| | || |||| |||||| || |||||||||||| |||||||||    
T  9963759 tcaagttcagctcatttatctaacgaacttaatttttaacttaagttcagctcatttggttcatgaacccagttcaacg 9963837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 13829877 - 13829974
Alignment:
Q  22 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    |||||||||| ||||||||||||||||  |||||||| | ||||||| || ||| || |||| ||||||||||||||||| || || |||||| ||||    
T  13829877 ttcaagttcaactcatttaattaacgagtttaatttttaactcaagttcaactcatttggtttatgaaccaagttcaacgaatcaattatcgaatcga 13829974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 27464713 - 27464572
Alignment:
Q  22 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 121  Q
    ||||||| || ||| |||| |||  ||||||||||||||  |||||| |  ||| || |||||||||||||| ||||||  || || |||||| || | |    
T  27464713 ttcaagtccaactcctttatttagggaacttaattttcaattcaagttcgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcaagt 27464614  T
Q  122 gtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     |||||||||  |||||||||||||||||||||||| |||||    
T  27464613 ctcgaactattttcgagttggttcggttcattgtcagcccta 27464572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 119
Target Start/End: Original strand, 14103251 - 14103363
Alignment:
Q  7 tcgaaaaatatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggatta 106  Q
    |||||| |||| ||||| |||||| |||||||||||||||||||||||||||||| | |||| |  ||  || || |||||||||||||| ||||  |||    
T  14103251 tcgaaatatatatagtttaagttctgctcatttaattaacgaacttaattttcagtttaagttcgacttatttggctcatgaaccaagttaaacgagtta 14103350  T
Q  107 aatatcgagtcga 119  Q
    | ||| |||||||    
T  14103351 attattgagtcga 14103363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 163
Target Start/End: Complemental strand, 27902551 - 27902439
Alignment:
Q  51 ttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttc 150  Q
    |||||||||||||||||| | | || ||  ||||||||||||||||| ||| || || | |||| |||| |  |||||| ||||||||||||||||||||    
T  27902551 ttaattttcagctcaagttcggttcattttgttcatgaaccaagttcgacgaatcaattgtcgaatcgatttacgaactttaatcgagttggttcggttc 27902452  T
Q  151 attgtcatcccta 163  Q
    | ||||| |||||    
T  27902451 aatgtcagcccta 27902439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 2578089 - 2578156
Alignment:
Q  33 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 100  Q
    |||||||| |||||||| |||||||||||||||||| |||||| || | |||||||| ||||||||||    
T  2578089 ctcatttatttaacgaatttaattttcagctcaagttcagctcatttgattcatgaatcaagttcaac 2578156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 38409720 - 38409641
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaa 93  Q
    |||| ||||| |||||||||||| ||| || || ||||||||||||||||||||| | |||| || ||||||||||||||    
T  38409720 atatatagttaaagttcagctcaattagttcacaaacttaattttcagctcaagttcggctcatttggttcatgaaccaa 38409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 35796258 - 35796358
Alignment:
Q  56 tttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgt 155  Q
    |||| |||||||| || | |||||| |||||||||||||||||| | || || | | ||||||||| || ||||||| |||||||| |||| ||||||||    
T  35796258 tttctgctcaagttcaacccgttagattcatgaaccaagttcaatgaatcaactgttgagtcgaatttcaaactatattcgagttgattcgattcattgt 35796357  T
Q  156 c 156  Q
    |    
T  35796358 c 35796358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 17369125 - 17368996
Alignment:
Q  27 gttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcga 126  Q
    ||||| |||||||| ||||| || |||||||||| ||||||| |  ||| || ||||||| ||| || |||||||  |||| | |||||| || |  |||    
T  17369125 gttcaactcatttacttaacaaatttaattttcaactcaagttcgactcatt-ggttcataaactaaattcaacgagttaattgtcgagttgagttccga 17369027  T
Q  127 actataatcgagttggttcggttcattgtca 157  Q
    |||||| ||||||||| ||||||||||||||    
T  17369026 actatattcgagttggctcggttcattgtca 17368996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 19589918 - 19589841
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttc 97  Q
    |||||||||||||||||||||||||||| ||||| ||||| || ||||||  | ||| || |||||||||| |||||||    
T  19589918 tagttcaagttcagctcatttaattaacaaactt-atttttagttcaagtttatctcatttggttcatgaagcaagttc 19589841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 20203797 - 20203723
Alignment:
Q  80 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 154  Q
    |||||||||||||||||||||| || || | | || ||||||  |||||| ||||||||||||||||||| ||||    
T  20203797 ggttcatgaaccaagttcaacgaatcaattgttgaatcgaattacgaactttaatcgagttggttcggttaattg 20203723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 33831418 - 33831453
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaa 49  Q
    |||||||| |||||||||||||||||||||||||||    
T  33831418 atatgtagctcaagttcagctcatttaattaacgaa 33831453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 40680221 - 40680263
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctca 65  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||    
T  40680221 tcaaattcagctcatttatttaacgaacataattttcagctca 40680263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 39690170 - 39690215
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagt 68  Q
    ||||||||| |||| ||| || ||||||||||||||||||||||||    
T  39690170 tcaagttcaactcaattagttgacgaacttaattttcagctcaagt 39690215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 1094457 - 1094533
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaa 99  Q
    ||||||||  |||||||| | ||||| ||||||||||| ||||||| |  ||| || |||||||||||||| |||||    
T  1094457 tcaagttcgactcatttattcaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaattcaa 1094533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 17616281 - 17616397
Alignment:
Q  37 tttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcg 136  Q
    |||| |||| |||||||||||| ||||||||| | |||| || |||||||| | ||| |||||||   ||| | |||| |||| | || ||||||  |||    
T  17616281 tttagttaatgaacttaatttttagctcaagttcggctcatttggttcatgtatcaaattcaacgagataattgtcgaatcgagtttctaactattttcg 17616380  T
Q  137 agttggttcggttcatt 153  Q
    |||||||||| ||||||    
T  17616381 agttggttcgattcatt 17616397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 18667751 - 18667827
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaa 99  Q
    ||||||||| || ||||| |||||||| ||||  || ||||||| |   ||||||| ||||||||||||||||||||    
T  18667751 tcaagttcaacttatttatttaacgaaattaagctttagctcaaattatgctcgtttggttcatgaaccaagttcaa 18667827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 1e-69; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 27906089 - 27906238
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27906089 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 27906188  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  27906189 agtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 27906238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 18880183 - 18880326
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18880183 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 18880282  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18880283 agtcgaatgtcgaactataatcgagttggttcggttcattgtca 18880326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 29328039 - 29328184
Alignment:
Q  18 gtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtc 117  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  29328039 gtagctcaagttaagctcatttaattaacgaacttaattttcagctcaagtccagct-gttaggttcatgaatcaagttcaacggattaaatatcgagtc 29328137  T
Q  118 gaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  29328138 gaatgtcgaactataatcgagtttgttcggttcattgtcagccctaa 29328184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 31620859 - 31621008
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||| |||| || ||| ||||||||||||||||| ||||| ||| ||| | |||    
T  31620859 atatgtaactcaagttcagctcatttaattaacgaacttaatattcagctgaagttcaactcattaggttcatgaaccaaattcaatggactaattgtcg 31620958  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||| |||||||||| || ||||||||||||||||||||| |||||    
T  31620959 agtcgaatttcgaactatattcaagttggttcggttcattgtcagcccta 31621008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 38523005 - 38522861
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||| || |||||||||||||||||||| |||  || |||||||||     
T  38523005 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaatggaccaattatcgagtca 38522906  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||  ||||||||| ||||||||||||||||||||| || |||||    
T  38522905 aattacgaactatattcgagttggttcggttcattgccagcccta 38522861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 3801508 - 3801364
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| | |||| || |||||||||||||||||||| | |  || | ||||||||    
T  3801508 tagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcg 3801409  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||  ||||||||| ||||||||||||||||||||| || |||||    
T  3801408 aattacgaactatattcgagttggttcggttcattgccagcccta 3801364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 15933160 - 15933303
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaatt---ttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    |||||||| ||||||||| ||||||||||||||    || |||||| || || ||| ||||||||||||||||||||||||| ||||| | |||||||||    
T  15933160 tcaagttcggctcatttatttaacgaacttaatagtatttagctcatgttcaactcattaggttcatgaaccaagttcaacgaattaactgtcgagtcga 15933259  T
Q  120 atgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    || |||||||||| ||||||||||||||||||||| || |||||    
T  15933260 atttcgaactatactcgagttggttcggttcattgccagcccta 15933303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 1840827 - 1840687
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||||||| || |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||  |||| | |||| | || |     
T  1840827 tcaagttcagctcatttatttcacgaacttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaattgagtt 1840728  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
      |||||||  ||||||||||||||||||||| || |||||    
T  1840727 ctgaactattgtcgagttggttcggttcattgccaacccta 1840687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 19282257 - 19282120
Alignment:
Q  20 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||||| |||||| || ||||||||||||||||||||||  |||| | |||| |  |    
T  19282257 agttcaagttcagctcatctacttaacgaacctaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaatgaa 19282158  T
Q  120 atgtcgaactataatcgagttggttcggttcattgtca 157  Q
     |  |||||||| ||||||||||||| | |||||||||    
T  19282157 gttccgaactattatcgagttggttcagctcattgtca 19282120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 31021868 - 31021997
Alignment:
Q  28 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 127  Q
    ||||||||||||| ||||| ||||||||||  ||||||| | |||||| || ||||||||||||||  ||||||  |||| ||||||||||| |  ||||    
T  31021868 ttcagctcatttagttaacaaacttaatttcaagctcaaattcagctcatttggttcatgaaccaaactcaacgagttaattatcgagtcgagttccgaa 31021967  T
Q  128 ctataatcgagttggttcggttcattgtca 157  Q
    ||||| ||||||||||||||||||||||||    
T  31021968 ctatattcgagttggttcggttcattgtca 31021997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 20188973 - 20189113
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||| ||| || |||||||||||||| || |||||| | |||| || |||||||||||||||||| ||| || || |||||| || |||     
T  20188973 tcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcaaatt 20189072  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     |||||| ||||||||||| ||||||||||||||| |||||    
T  20189073 acgaactctaatcgagttgattcggttcattgtcagcccta 20189113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 27450725 - 27450581
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||||||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||||||||||||| ||| ||||||| || || |||||| |||    
T  27450725 tagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaaattcaacgaatcaattatcgaatcg 27450626  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||| ||| |||||  ||||||||||||||||||||| || |||||    
T  27450625 aatctcgcactattttcgagttggttcggttcattgccagcccta 27450581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 41783325 - 41783465
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||| | |||| || |||||||||||||||||||||| | ||| || |||||||| |     
T  41783325 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcatttggttcatgaaccaagttcaacgaactaattaccgagtcgagtt 41783424  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     |||||| || ||||||||  |||||||||||||| |||||    
T  41783425 ccgaactttattcgagttgtatcggttcattgtcagcccta 41783465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 39407397 - 39407536
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| ||||||||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||||||||||||| ||||||||||| || || |||||    
T  39407397 atatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcg 39407496  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcatt 153  Q
    | |||||| ||| |||||  | ||||||||||||||||||    
T  39407497 aatcgaatctcgcactatttttgagttggttcggttcatt 39407536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 23 - 153
Target Start/End: Complemental strand, 14500846 - 14500716
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||||| | |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||||||| | ||| ||||||||||| |     
T  14500846 tcaagttcaactcattcagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattatcgagtcgagtt 14500747  T
Q  123 tcgaactataatcgagttggttcggttcatt 153  Q
     |||||| || ||||||||  ||||||||||    
T  14500746 ccgaactgtattcgagttgtatcggttcatt 14500716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 165
Target Start/End: Complemental strand, 34719806 - 34719655
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| ||||||||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||| ||||||||| ||||||||||| || || |||||    
T  34719806 atatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaagttcatgaatcaagttcaacgaatcaattatcg 34719707  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
    | || ||| ||| |||||  ||||||||||||| ||||||| || |||||||    
T  34719706 aatcaaatctcgcactattttcgagttggttcgtttcattgccagccctaat 34719655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 10493981 - 10494125
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||  |||||||||||||||| |  || ||| || |||    
T  10493981 tagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtttgtgaaccaagttcaacgaaccaattattgaatcg 10494080  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||| || ||||||  | ||||||||||||||||||| || |||||    
T  10494081 aatatcaaactatttttgagttggttcggttcattgccagcccta 10494125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 26218047 - 26218187
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||| | |||||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||||||| | ||| || |||||||| |     
T  26218047 tcaagtttaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagtt 26218146  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     |||||| || | ||||||  ||||||||||| || |||||    
T  26218147 ccgaactttatttgagttgtatcggttcattgccagcccta 26218187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 27196077 - 27196217
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| ||| ||||  |||||| ||||||||||| ||||||| |  ||| || |||||||||||||| || |||| || || |||||| |||| |     
T  27196077 tcaagttcaactcctttatctaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaatttaacgaatcaattatcgaatcgagtc 27196176  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||  |||||||||||||||||||||||| |||||    
T  27196177 tcgaactattttcgagttggttcggttcattgtcagcccta 27196217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 165
Target Start/End: Original strand, 26298302 - 26298453
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| ||||| ||||||| |||||||| ||||||| ||||||||| | |||||||    ||| ||||||||||||| ||||||||||| || || |||||    
T  26298302 atatttagtttaagttcaactcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatcaagttcaacgaatcaattatcg 26298401  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
    | |||||| ||  |||||  | ||||||||||||||||||| || |||||||    
T  26298402 aatcgaatctcacactatttttgagttggttcggttcattgccagccctaat 26298453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 26299838 - 26299977
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| |||||||||||||  ||||||| ||||||| ||||||||| | |||||||    ||| |||||||||||||  |||||||||| || || |||||    
T  26299838 atatttagttcaagttcaattcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatgaagttcaacgaatcaattatcg 26299937  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcatt 153  Q
    | |||||| ||| |||||  ||||||||||||||||||||    
T  26299938 aatcgaatctcgcactattttcgagttggttcggttcatt 26299977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 153
Target Start/End: Original strand, 39414181 - 39414312
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagc-tcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 121  Q
    |||||||||||||||||| ||||||||||||||||| | | | |||| |||||| ||||||||||| |||||||||||||  |||| | |||| |  | |    
T  39414181 tcaagttcagctcatttatttaacgaacttaatttttaacttaaagttcagctcattaggttcatggaccaagttcaacgagttaattgtcgaattaagt 39414280  T
Q  122 gtcgaactataatcgagttggttcggttcatt 153  Q
     |||||||||  ||||||||||||||||||||    
T  39414281 ttcgaactattgtcgagttggttcggttcatt 39414312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 20190724 - 20190594
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||| |||   | ||||||||||||| ||||||||| | |||| || |||||||||||||||||| | | || || |||||| ||||||     
T  20190724 tcaagttcagctcaattaggcagcgaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcgatgaatcaattatcgaatcgaatt 20190625  T
Q  123 tcgaactataatcgagttggttcggttcattg 154  Q
     |||||| |||| |||||||||||||||||||    
T  20190624 acgaact-taatagagttggttcggttcattg 20190594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 32157081 - 32156955
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||         ||| || ||||||| ||||||||| |||  || | || |||||    
T  32157081 tagttcaagttcagctcatttaattaacgaacttaattttcaactcaa---------gtttggctcatgaaacaagttcaatggaccaattgtcaagtcg 32156991  T
Q  119 aatgtcgaactataatcgagttggttcggttcattg 154  Q
    |||  ||||||||| |||| ||||||||||||||||    
T  32156990 aattacgaactatattcgaattggttcggttcattg 32156955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 164
Target Start/End: Complemental strand, 32945158 - 32945020
Alignment:
Q  26 agttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcg 125  Q
    ||||| ||||||||| || |||| |||||||||   ||||||| |  ||| || ||||||||||||||||| |||| || || || ||| |||| | |||    
T  32945158 agttcggctcatttatttgacgagcttaatttttgactcaagttcgactcatttggttcatgaaccaagtttaacgaatcaattaccgaatcgagtttcg 32945059  T
Q  126 aactataatcgagttggttcggttcattgtcatccctaa 164  Q
    ||||||  |||||||||||||||||||||||| ||||||    
T  32945058 aactattttcgagttggttcggttcattgtcagccctaa 32945020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 11136146 - 11136051
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||| | ||||||| ||||| |||||||||||||||| | ||| || ||||||||    
T  11136146 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttc-tgaaccaagttcaacgaactaattaccgagtcga 11136051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 154
Target Start/End: Complemental strand, 34724891 - 34724763
Alignment:
Q  26 agttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcg 125  Q
    |||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||||||||||||| ||||||||||| || || |||| | |||||| ||     
T  34724891 agttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcaaatcgaatctca 34724792  T
Q  126 aactataatcgagttggttcggttcattg 154  Q
     |||||  || ||||||||||||||||||    
T  34724791 cactattttcaagttggttcggttcattg 34724763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 34857338 - 34857488
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| ||||| ||||| | |||||||| ||||||| ||||||||| | ||||||| |  ||| |||| |||||||| ||||||||||| || || ||| |    
T  34857338 atatttagtttaagtttaactcatttatttaacgagcttaattttaaactcaagttcgactcattagattcatgaatcaagttcaacgaatcaattattg 34857437  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
    | | |||| ||  |||||  ||||||||||||||||||||| || ||||||    
T  34857438 aattgaatctcacactattttcgagttggttcggttcattgccaaccctaa 34857488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 19716174 - 19716318
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| |||||||||||||  ||||||| ||||||| ||||||||| | || |||| |  ||| ||||||||||||| ||||||||||| || || ||       
T  19716174 atatttagttcaagttcaattcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcatgaatcaagttcaacgaatcaatta--- 19716270  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
      |||||| ||| |||||  ||||||||||||||||||||| || |||||    
T  19716271 --tcgaatctcgcactattttcgagttggttcggttcattgccagcccta 19716318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 34723802 - 34723715
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 101  Q
    |||| ||||||||||||| |||||||| ||||||| ||||||||| | ||||| | |  ||| ||||||||||||| |||||||||||    
T  34723802 atatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaaattcgactcattaggttcatgaatcaagttcaacg 34723715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 40056497 - 40056382
Alignment:
Q  29 tcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaac 128  Q
    |||||||||||| ||||||||||||||||||| ||||| |  | ||  || |||||||||||||| |||||||   ||| | |||| |||||| || |||    
T  40056497 tcagctcatttatttaacgaacttaattttcatctcaaatttaacttatttggttcatgaaccaaattcaacgagataattgtcgaatcgaatttcaaac 40056398  T
Q  129 tataatcgagttggtt 144  Q
    ||| ||||||||||||    
T  40056397 tattatcgagttggtt 40056382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 2676012 - 2676146
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||||  | | ||| || |||||||||||||||||||||||| |  ||| || |||||||||||| ||||| ||| || || | |||  |||    
T  2676012 tagttcaagttcaatttaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaacctagttcgacgaatcaattgtcggatcg 2676111  T
Q  119 aatgtcgaactataatcgagttggttcggttcatt 153  Q
    |||  |||||| ||||||| |||||| ||||||||    
T  2676112 aattacgaactttaatcgaattggtttggttcatt 2676146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 43386763 - 43386858
Alignment:
Q  70 cagctcgttaggttcatgaaccaa--gttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||| |||||||||||||||||  |||||||||||||| | |||| |||||| || ||||||| || ||||| || | |||||||||| |||||    
T  43386763 cagctcattaggttcatgaaccaattgttcaacggattaattgtcgaatcgaatttcaaactatactcaagttgatttgattcattgtcagcccta 43386858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 5382915 - 5382824
Alignment:
Q  73 ctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
    |||||| |||||||||| ||||||||||| ||||| || ||| |||| | ||||||| |  || ||||||||| ||||||||||| ||||||    
T  5382915 ctcgtttggttcatgaatcaagttcaacgaattaattaccgaatcgagtctcgaactcttttcaagttggttcagttcattgtcagccctaa 5382824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 167
Target Start/End: Original strand, 10327987 - 10328074
Alignment:
Q  80 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaatat 167  Q
    |||||||||| ||||||||||| || || || ||| |||| | | |||| ||  |||||||||||||||||||||||| |||||||||    
T  10327987 ggttcatgaatcaagttcaacgaatcaattaccgaatcgagttttgaacaattttcgagttggttcggttcattgtcagccctaatat 10328074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 39409131 - 39409206
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaa 89  Q
    |||| ||||||||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| |||||||||||||    
T  39409131 atatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaa 39409206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 28247473 - 28247551
Alignment:
Q  86 tgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
    |||||||||||||||| || || |||| | || ||| |||||||||  |||| ||||||||||||||||||| ||||||    
T  28247473 tgaaccaagttcaacgaatcaattatcaaatcaaatatcgaactattttcgaattggttcggttcattgtcagccctaa 28247551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 17168589 - 17168449
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttc--agctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagt 116  Q
    ||||||||||||| ||| ||||  ||||||| ||||||||   |||| |||| | |||| || ||||  |||||||||||||||  |||||||||||| |    
T  17168589 tagttcaagttcaactcgtttatataacgaagttaattttttgagcttaagttcggctcatttggtttgtgaaccaagttcaacaaattaaatatcgaat 17168490  T
Q  117 cgaatgtcgaactataatcgagttggttcggttcattgtca 157  Q
    | | | || ||||||  |||||||  |||||||||||||||    
T  17168489 ctagtctcaaactattttcgagttacttcggttcattgtca 17168449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 1225346 - 1225429
Alignment:
Q  18 gtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 101  Q
    ||||||||||||| | ||||||| || |||| ||||||||||| ||||||| |  ||| || ||||||| ||| ||||||||||    
T  1225346 gtagttcaagttcggttcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcataaactaagttcaacg 1225429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 30661056 - 30660971
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaa 99  Q
    |||| ||||||| ||||  ||||| |||||||| ||||||||||||| || || | |||||| ||  |||||||||| ||||||||    
T  30661056 atatatagttcatgttcgactcatataattaacaaacttaattttcaacttaaattcagctcatttagttcatgaactaagttcaa 30660971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 19287 - 19437
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  19287 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaaaggattagatatcg 19386  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  19387 agtcgaatgtcgaactataatcgagttggttcggttcattgccagccctaa 19437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 11161563 - 11161703
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11161563 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 11161662  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattg 154  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  11161663 agtcgaatgtcgaactataatcaagttggtttggttcattg 11161703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 453474 - 453623
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  453474 atatgtagctcaagttcaactcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 453573  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  453574 agtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 453623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 33280121 - 33279977
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||||||||| ||| || |||||||||||||| ||||||  | | |||| || |||||||||||||||||| ||| || || |||||| ||     
T  33280121 tagttcaagttcagctcaattagttgacgaacttaattttaagctcatattcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatca 33280022  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||  |||||| ||||||||||||||||||||||||||| |||||    
T  33280021 aattacgaactttaatcgagttggttcggttcattgtcagcccta 33279977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 9412664 - 9412522
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||| |||||||||||||  ||||||| |||||| ||| ||||||| |||||| || ||||||||||||||||||||||  || | | |||||||||       
T  9412664 tcaaattcagctcatttatgtaacgaatttaattctcaactcaagttcagctcatttggttcatgaaccaagttcaacgagttcattgtcgagtcgagct 9412565  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
     | ||||||||||||||||||||||||||||| || |||||||    
T  9412564 ccaaactataatcgagttggttcggttcattgccagccctaat 9412522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 3307934 - 3308074
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||| | |||| || ||||||||||| |||||| |||  |||| | |||| |||| |     
T  3307934 tcaagttcggctcatttatttaacgaacttaattttctgctcaagttcggctcatttggttcatgaactaagttctacgagttaattgtcgaatcgagtt 3308033  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     ||||||||  ||||||||||||||||||||| || |||||    
T  3308034 ccgaactattgtcgagttggttcggttcattgccagcccta 3308074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 34516134 - 34516269
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||||| | |||| || |||| ||||| ||||||||| | || || | |||| | |    
T  34516134 tagttcaagttcagctcaattaatcgacgaacttaattttcagctcaagttcggctcatttggttgatgaatcaagttcaatgaatcaattgtcgaattg 34516233  T
Q  119 aatgtcgaactataatcgagttggttcggttcattg 154  Q
    |||  |||||| |||| |||||||||||||||||||    
T  34516234 aattacgaactttaattgagttggttcggttcattg 34516269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 153
Target Start/End: Complemental strand, 27189222 - 27189092
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||| ||| || |||||||||||||||||||||||| |  ||| || |||||||||||||||||| ||| || || |||||| || |||     
T  27189222 tcaagttcaactcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcgacgaatcaattatcgaatctaatt 27189123  T
Q  123 tcgaactataatcgagttggttcggttcatt 153  Q
     |||||| ||||||||||| |||||||||||    
T  27189122 acgaactctaatcgagttgattcggttcatt 27189092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 43384831 - 43384936
Alignment:
Q  60 agctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatc 159  Q
    ||||||||| || ||| || |||||||||||||| ||||||| ||||| |||||| |||||| |||||||||  |||||||||||||||||||||  |||    
T  43384831 agctcaagttcaactcatttggttcatgaaccaacttcaacgaattaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgctatc 43384930  T
Q  160 cctaat 165  Q
    ||||||    
T  43384931 cctaat 43384936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 43967510 - 43967588
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 101  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||| |||||||    
T  43967510 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaaattcaacg 43967588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 23181151 - 23181225
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaa 93  Q
    |||||||||||||||||| ||| || ||||||||||||||||| |||||| | |||| || ||||||||||||||    
T  23181151 tagttcaagttcagctcaattagtttacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaa 23181225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 34655035 - 34655175
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||| | |||||||| ||||| |||||||| || ||||||||| |  |||||| ||||||||||| |||||||||  | ||| || |||||||| |     
T  34655035 tcaagtttaactcatttagttaacaaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaacaaactaattaccgagtcgagtt 34655134  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
     |||||| || ||||||||  ||||||||||| || |||||    
T  34655135 ccgaactttattcgagttgtatcggttcattgccagcccta 34655175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 153
Target Start/End: Original strand, 1091727 - 1091857
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||||||  || |||||||||||||| | |||| || |  |||||| |||||||||| ||||||||||| ||||| |||||| |||| |     
T  1091727 tcaagttcaactcatttgtttgacgaacttaattttaaactcaggttcgactcgtttggttcatgaatcaagttcaacgaattaattatcgaatcgagtc 1091826  T
Q  123 tcgaactataatcgagttggttcggttcatt 153  Q
    || ||||||  | ||||| |||| |||||||    
T  1091827 tcaaactatttttgagtttgttcagttcatt 1091857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 9135943 - 9136048
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| ||| |||||| ||| ||||||| ||||| ||||||| ||||||||||||| |||||  || | ||||| ||||||||||||||  |||| | |||    
T  9135943 atatatagatcaagtccagttcatttagttaacaaacttaaatttcagctcaagttcagcttatttgattcataaaccaagttcaacgagttaattgtcg 9136042  T
Q  114 agtcga 119  Q
    ||||||    
T  9136043 agtcga 9136048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 12378389 - 12378492
Alignment:
Q  60 agctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatc 159  Q
    ||||||||| || ||| || ||||| |||||||||||||||| || || ||||||  ||||| ||| |||||  | ||||| |||||||||||||||| |    
T  12378389 agctcaagttcaactcatttggttcgtgaaccaagttcaacgaatcaattatcgaaccgaatctcggactatttttgagtttgttcggttcattgtcaac 12378488  T
Q  160 ccta 163  Q
    ||||    
T  12378489 ccta 12378492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 10749359 - 10749314
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagt 68  Q
    |||||||||||||| ||| || ||||||||||||||||||||||||    
T  10749359 tcaagttcagctcaattagttgacgaacttaattttcagctcaagt 10749314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 24854603 - 24854739
Alignment:
Q  27 gttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcga 126  Q
    |||| |||| ||||||||||||  |||||||||||||||||| || ||| || ||||||  ||||||||| ||||  |||| | |||||| |||| || |    
T  24854603 gttcggctcgtttaattaacgagtttaattttcagctcaagttcaactcatttggttcacaaaccaagtttaacgagttaattgtcgagttgaatttcaa 24854702  T
Q  127 actataatcgagttggttcggttcattgtcatcccta 163  Q
    ||| || || || || ||||||| |||| || |||||    
T  24854703 actttattcaagctgtttcggtttattgccaacccta 24854739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 39478090 - 39478190
Alignment:
Q  63 tcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatccct 162  Q
    |||||| || ||| || |||||||||||||||| ||| | |  || |||||| |||| | |||||||||  ||||||||||||||||||||| || ||||    
T  39478090 tcaagttcaactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagccct 39478189  T
Q  163 a 163  Q
    |    
T  39478190 a 39478190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 153
Target Start/End: Original strand, 32740639 - 32740769
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||| ||| |  ||| ||||||| ||||||| |||||| ||| || || |||||||||||||| ||||| |  |||| | |||| | || |     
T  32740639 tcaagttcagcttattaatctaatgaacttatttttcagttcaagttcagttcatttggttcatgaaccaaattcaatgagttaattgtcgaattgagtt 32740738  T
Q  123 tcgaactataatcgagttggttcggttcatt 153  Q
     | ||||||  ||||||||||||||||||||    
T  32740739 ccaaactattgtcgagttggttcggttcatt 32740769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 23181246 - 23181278
Alignment:
Q  132 aatcgagttggttcggttcattgtcatccctaa 164  Q
    |||||||||||||||||||||||||| ||||||    
T  23181246 aatcgagttggttcggttcattgtcaaccctaa 23181278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 35058318 - 35058398
Alignment:
Q  34 tcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcga 114  Q
    ||||||| ||||| ||||| ||||||||||||||| |||||| || | ||  |||||||| || |||| ||||| ||||||    
T  35058318 tcatttagttaacaaacttgattttcagctcaagttcagctcatttgattgttgaaccaaattaaacgaattaattatcga 35058398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 4e-60; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 10346712 - 10346861
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  10346712 atatgtaactcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatag 10346811  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||||||||||||||||| |||||| ||||||||| || |||||    
T  10346812 agtcgaatgtcgaactataatcgatttggtttggttcattgccagcccta 10346861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 8200633 - 8200771
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||           |||||||||||||||| |||||||||||||||||||||||    
T  8200633 atatgtagctcaagttcaactcatttaattaacgaacttaattttcagc-----------tcgttaggttcatgaatcaagttcaacggattaaatatcg 8200721  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  8200722 agtcgaatgtcgaactataatcgagttggtttggttcattgtcagcccta 8200771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 5640401 - 5640252
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| |||||||||||||||||| ||| || ||||||||||||||||| |||||| | |||| || |||||||||||||||||| ||| || || |||||    
T  5640401 atatatagttcaagttcagctcaattagttgacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcg 5640302  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    | ||||||  |||||| |||||||||||||||||||||||| || |||||    
T  5640301 aatcgaattacgaactctaatcgagttggttcggttcattgccagcccta 5640252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 4441444 - 4441310
Alignment:
Q  20 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||  |||| ||||||||||||||||   ||| | |||| ||||    
T  4441444 agttcaagttcagctcatttatttaacgaacttaattttcaactcaagttcagctcatttagttcgtgaaccaagttcaacgagctaattgtcgaatcga 4441345  T
Q  120 atgtcgaactataatcgagttggttcggttcattg 154  Q
     | |||||||||  |||||||||||||||||||||    
T  4441344 gtttcgaactattgtcgagttggttcggttcattg 4441310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 3081862 - 3081718
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||| |  ||| || ||||| |||||||||||||||| |  || |||||| |||    
T  3081862 tagttcaagttcagctcatttaattaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcgaatcg 3081763  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    | | |||||||||  ||||| ||||||||||||||| || |||||    
T  3081762 agtatcgaactattttcgagctggttcggttcattgccagcccta 3081718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 10961940 - 10961796
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||||||||| ||| || |||||||||||||||||||||| | |  ||| || |||||||||||||||||||||| || || | |||| ||     
T  10961940 tagttcaagttcagctcaattagttgacgaacttaattttcagctcaaattcgactcatttggttcatgaaccaagttcaacgaatcaattgtcgaatca 10961841  T
Q  119 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||  | |||| |||||||||||||||||||||||| || |||||    
T  10961840 aattacaaactttaatcgagttggttcggttcattgccagcccta 10961796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 6999264 - 6999409
Alignment:
Q  20 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    ||||||||||||| ||||||  ||||| ||||||||||||||||||||| |||||| ||  |||||| |||||||||||||| ||||| |||||| ||||    
T  6999264 agttcaagttcagttcatttgtttaacaaacttaattttcagctcaagttcagctcatttagttcattaaccaagttcaacgaattaattatcgaatcga 6999363  T
Q  120 atgtcgaactataatcgagttggttcggttcattgtcatccctaat 165  Q
     | || ||||||  |||||||| |||| || ||||||  |||||||    
T  6999364 gtctcaaactattgtcgagttgcttcgatttattgtctgccctaat 6999409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 32 - 164
Target Start/End: Original strand, 1501857 - 1501989
Alignment:
Q  32 gctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactat 131  Q
    ||||||||| ||||||||||||||||||||||||||| | | || || ||||||||||| ||||||||||  |||| | || | |||| | |||||| ||    
T  1501857 gctcatttatttaacgaacttaattttcagctcaagttcggttcatttggttcatgaacgaagttcaacgagttaattgtcaaatcgagtttcgaacaat 1501956  T
Q  132 aatcgagttggttcggttcattgtcatccctaa 164  Q
      |||||||||||||||||||||||| ||||||    
T  1501957 tgtcgagttggttcggttcattgtcagccctaa 1501989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 13312019 - 13312164
Alignment:
Q  20 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||| |  ||| || |||||||||||||||| ||| | |  || |||||| ||||    
T  13312019 agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcga 13312118  T
Q  120 --atgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
      || |||||||||  ||||||||||||||||||||| || |||||    
T  13312119 gtatatcgaactattttcgagttggttcggttcattgccagcccta 13312164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 154
Target Start/End: Original strand, 33110458 - 33110589
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||  |||||||| |||||||||||||| || |||| |||| | ||||||| |||||||||||||||||||||| | ||| || |||||||| |     
T  33110458 tcaagttcgactcatttagttaacgaacttaatctttagcttaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagtt 33110557  T
Q  123 tcgaactataatcgagttggttcggttcattg 154  Q
     |||||| || ||||||||  |||||||||||    
T  33110558 ccgaactttattcgagttgtatcggttcattg 33110589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 7437300 - 7437434
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||||||||||||||||| ||||||| ||||||||||| || |||| |  ||| || ||||| |||||||||||||||| |   | |||||| |||    
T  7437300 tagttcaagttcagctcatttatttaacgagcttaattttcaactaaagttcgactcatttggttcgtgaaccaagttcaacgaacccattatcgaatcg 7437399  T
Q  119 aatgtcgaactataatcgagttggttcggttcatt 153  Q
    | | |||||||||  ||||||| ||||||||||||    
T  7437400 agtatcgaactattttcgagttagttcggttcatt 7437434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 32163541 - 32163618
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 100  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||  ||||| |||||||||||||||| |||||||    
T  32163541 tcaagttaagctcatttagttaacgaacttaattttcaactcaagtttagctcattaggttcatgaaccatgttcaac 32163618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 11460146 - 11460011
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||        | || |||||||||||||||||||||| || || |||||| |||| |     
T  11460146 tcaagttcagctcatttatttaacaaacttaattctcagctcaa--------catttggttcatgaaccaagttcaacgaatcaattatcgaatcgagtt 11460055  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatccctaata 166  Q
     |||||||| || ||||||| ||||||||||| || ||||||||    
T  11460054 ccgaactattattgagttggatcggttcattgccaaccctaata 11460011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 17441168 - 17441298
Alignment:
Q  33 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactata 132  Q
    |||||||| || |||| ||||||||||| ||||||| || ||| || ||||||||||| |||||||||| ||||| || | | |||| | |||||||||     
T  17441168 ctcatttatttgacgagcttaattttcaactcaagttcaactcatttggttcatgaactaagttcaacgaattaattaccaaatcgagtttcgaactatt 17441267  T
Q  133 atcgagttggttcggttcattgtcatcccta 163  Q
     ||| ||||||||||||||||| || |||||    
T  17441268 ttcgggttggttcggttcattgccaacccta 17441298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 9950900 - 9950826
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttc 97  Q
    |||||||||||||| ||| || |||||||||||||||| ||||||| | |||| || ||||||||||||||||||    
T  9950900 tcaagttcagctcaattagttgacgaacttaattttcaactcaagttcggctcatttggttcatgaaccaagttc 9950826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 13355761 - 13355722
Alignment:
Q  27 gttcagctcatttaattaacgaacttaattttcagctcaa 66  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13355761 gttcagctcatttaattaacgaacttaattttcagctcaa 13355722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 18095519 - 18095653
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||||||| ||||||||||||||||| | ||||||| |  ||  || ||||| |||||||||||||||| ||  | |||||| |||| |     
T  18095519 tcaagttcatctcatttatttaacgaacttaatttttaactcaagttcgacttatttggttcgtgaaccaagttcaacgaatccattatcgaatcgagtc 18095618  T
Q  123 tcgaactataatcgagttggttcggttcattgtca 157  Q
    || |||| |  | ||||||||| ||||||||||||    
T  18095619 tcaaactttttttgagttggtttggttcattgtca 18095653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 18099816 - 18099950
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||||||| ||||||||||||||| | | ||||| | |  ||| || ||||| |||||||||||||||| ||  | |||||| |||| |     
T  18099816 tcaagttcatctcatttatttaacgaacttaattgttaactcaaattcgactcatttggttcgtgaaccaagttcaacgaatccattatcgaatcgagtc 18099915  T
Q  123 tcgaactataatcgagttggttcggttcattgtca 157  Q
    || |||| |  ||||||||||| ||||||||||||    
T  18099916 tcaaacttttttcgagttggtttggttcattgtca 18099950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 27985034 - 27984956
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttc 97  Q
    |||||||||||||||||| ||| || || |||||||||||||| |||||| | |||| || ||||||| ||||||||||    
T  27985034 tagttcaagttcagctcaattagtttacaaacttaattttcagttcaagttcggctcatttggttcataaaccaagttc 27984956  T

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Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 22295928 - 22295989
Alignment:
Q  35 catttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagtt 96  Q
    |||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||    
T  22295928 catttacttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtt 22295989  T

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Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 12428887 - 12428929
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctca 65  Q
    |||||||| ||||||||| ||||||||||||||||||||||||    
T  12428887 tcaagttcggctcatttatttaacgaacttaattttcagctca 12428929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 21298913 - 21298955
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctca 65  Q
    |||||||||||||| ||||||||| ||||||||||||||||||    
T  21298913 tcaagttcagctcagttaattaacaaacttaattttcagctca 21298955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 9463498 - 9463363
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    ||||| |||||| |||| ||||| |||||||||||||||| || | || | |||||| || ||||||| ||| ||||| || |  |||| ||||||||||    
T  9463498 tagtttaagttcggctcgtttaaataacgaacttaatttttagtttaaattcagctcatttggttcataaactaagtttaatgagttaattatcgagtcg 9463399  T
Q  119 aatgtcgaactataatcgagttggttcggttcattg 154  Q
    | |  |||||| || |||||| |  |||||||||||    
T  9463398 agttccgaactttattcgagtagtctcggttcattg 9463363  T

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Target: scaffold0022 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 124625 - 124490
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||||||| ||||||||||||||||||| ||||||||  ||||||||||| |  ||| || |||||||||||||||||||| |||  || | |||||||     
T  124625 tagttcaaattcagctcatttaattaacaaacttaataatcagctcaagttcgactcatttggttcatgaaccaagttcaatggaccaattgtcgagtca 124526  T
Q  119 aatgtcgaactataatcgagttggttcggttcattg 154  Q
    ||| |||||||||| |||||||||||||||||||||    
T  124525 aatttcgaactatattcgagttggttcggttcattg 124490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 7450 - 7308
Alignment:
Q  21 gttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 120  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||||||| | |||| || |||||||||||||||||| ||| || || |||||| |||||    
T  7450 gttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaa 7351  T
Q  121 tgtcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |  |||||  ||||||| |||||||||||||||| || |||||    
T  7350 ttacgaacactaatcgaattggttcggttcattgccaccccta 7308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 11460 - 11600
Alignment:
Q  14 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 113  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||| || |||  ||||| ||||||||||| ||||| |||||    
T  11460 atatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaattatcg 11559  T
Q  114 agtcgaatgtcgaactataatcgagttggttcggttcattg 154  Q
    |||| ||| |  ||||||  |||||||||||||||||||||    
T  11560 agtcaaattttaaactatgttcgagttggttcggttcattg 11600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 9985 - 10120
Alignment:
Q  19 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 118  Q
    |||| ||| ||||||||||||||||||||||||||||||||| || |||| | |||| || ||| |||||| ||| ||||||| ||||| | |||||||     
T  9985 tagtacaaattcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattgtcgagtca 10084  T
Q  119 aatgtcgaactataatcgagttggttcggttcattg 154  Q
    ||| |  ||||||| |||||||| ||||||||||||    
T  10085 aattttaaactatattcgagttgattcggttcattg 10120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 21088 - 21227
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 122  Q
    ||||||||| |||||||| |||| || ||||||||||| ||||||| |  ||| || |||||||||||||||||||||| || || |||||| |||| |     
T  21088 tcaagttcaactcatttatttaatgagcttaattttcaactcaagttcgactcttt-ggttcatgaaccaagttcaacgaatcaattatcgaatcgagtc 21186  T
Q  123 tcgaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||||  |||||||||||||||||||||||| |||||    
T  21187 tcgaactattttcgagttggttcggttcattgtcagcccta 21227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 26759 - 26621
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 124  Q
    |||||||||||| ||| || |||||||||||||||||||||||| |  ||| || | |||||||||||||||||||  || |  | |||| ||||||  |    
T  26759 aagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattac 26660  T
Q  125 gaactataatcgagttggttcggttcattgtcatcccta 163  Q
    ||||| |||| ||||||||||| |||||||||| |||||    
T  26659 gaactctaattgagttggttcgattcattgtcagcccta 26621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 14428 - 14566
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 124  Q
    |||||| ||||||||| || |||| ||||||||||  ||||||| ||  || || |||||||||||||||||||| | || || || ||| |||| | ||    
T  14428 aagttcggctcatttatttgacgagcttaattttcgactcaagttcaaatcatttggttcatgaaccaagttcaatgaatcaattaccgaatcgagtttc 14527  T
Q  125 gaactataatcgagttggttcggttcattgtcatcccta 163  Q
    |||||||  ||| |||||||||||||||||||| |||||    
T  14528 gaactattttcgggttggttcggttcattgtcagcccta 14566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 11392 - 11524
Alignment:
Q  25 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 124  Q
    |||||| ||||||||| ||||||||||||||||| | || |||| || ||| || ||||||||||| |||||| |||   ||| | |||| |||| |  |    
T  11392 aagttcggctcatttatttaacgaacttaatttttaacttaagttcacctcatttggttcatgaactaagttcgacgaggtaattgtcgaatcgagttcc 11491  T
Q  125 gaactataatcgagttggttcggttcattgtca 157  Q
     |||||| |||||||||||||||||||||||||    
T  11492 aaactattatcgagttggttcggttcattgtca 11524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 324 - 241
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggatta 106  Q
    ||||||||| |||||||||||||||||||||||| | | ||||||| | |||  ||||||||||||||||||| ||||| ||||    
T  324 tcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaacgaatta 241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 907 - 829
Alignment:
Q  23 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 101  Q
    ||||||||| |||||||| ||||||| ||||||||||| | ||| | || ||| || ||||||||||||||||||||||    
T  907 tcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaacg 829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 32926 - 32794
Alignment:
Q  20 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 119  Q
    ||||||||||||  ||||||| ||||||| |||||||| || ||||||| |  ||| || |||   |||||||||||||||| |  || | |||| ||||    
T  32926 agttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggtg--tgaaccaagttcaacgaaccaattgtcgaatcga 32829  T
Q  120 atgtcgaactataatcgagttggttcggttcattg 154  Q
     | |||||||||  |||||||||||||||||||||    
T  32828 gtatcgaactattttcgagttggttcggttcattg 32794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 25706 - 25623
Alignment:
Q  22 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggatta 106  Q
    |||||||||| ||||||||||||||| ||||||||||||| | |||| | |||| || |  |||| |||||||||||||| ||||    
T  25706 ttcaagttcatctcatttaattaacggacttaattttcagtttaagttc-gctcatttgactcataaaccaagttcaacgaatta 25623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 154
Target Start/End: Complemental strand, 51443 - 51311
Alignment:
Q  22 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 121  Q
    |||||||||| |||||||| ||||| | ||||||||| |  ||| || |  ||| || |||||| |||| |||||||||| ||||  || |||  |||||    
T  51443 ttcaagttcaactcatttatttaacaagcttaattttaaaatcacgttcgactcatttggttcacgaactaagttcaacgaattatttaccgaaccgaat 51344  T
Q  122 gtcgaactataatcgagttggttcggttcattg 154  Q
     |||||||||  ||||| | |||||||||||||    
T  51343 ctcgaactattttcgagctagttcggttcattg 51311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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