View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13762_high_13 (Length: 312)
Name: NF13762_high_13
Description: NF13762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13762_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 37970778 - 37971016
Alignment:
| Q |
1 |
catcatcatgttacgaataatgcccttgcaaacgtcaataccaccattatcggtaactacatcatcatcgctgttaatctttacccatcctctgccaaac |
100 |
Q |
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| T |
37970778 |
catcatcatgttacgaataatgcccttgcaaacgtcaataccaccgttatcggtaactacatcatcatcgctgttaatctttacccatcctctgccaaac |
37970877 |
T |
|
| Q |
101 |
taaagagaagaagaagagaatatacttcaaagactcttcaatatgcattcnnnnnnnccaattattcgcttcaattaaacaaagttaaagaaaacttaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||| |
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| T |
37970878 |
taaagagaagaagaagagaatatacttcaaagactcttcaatatgcatgctttttttcc-attattcgcttcaattaaacaaagttaaagaaaacttaaa |
37970976 |
T |
|
| Q |
201 |
acgtcaacaatgctaatgttatgaaattagcttgatcccc |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
37970977 |
acgtcaacaatgctaatgttatgaaattagcttgatcccc |
37971016 |
T |
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