View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13763_high_102 (Length: 367)
Name: NF13763_high_102
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13763_high_102 |
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Alignment Details
Target: chr4 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 19 - 308
Target Start/End: Original strand, 2783400 - 2783689
Alignment:
| Q |
19 |
ctcccttcgccataaccgccctaacaatctctccgggattgacggacggttagttacgatcgcttcaacagattaacgagaccggagtaaggttaccgga |
118 |
Q |
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| T |
2783400 |
ctcccttcgccataaccgccctaacaatctctccgggattgacggacggttagttacgatcgcttcaacagattaacgagaccggagtaaggttaccgga |
2783499 |
T |
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| Q |
119 |
cggtggcgcatttgccatttccggtgaacggaagaggaggaagggaagttcagtgttggtggagggattgtgtggagacggtggagaagaacgccatgga |
218 |
Q |
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| T |
2783500 |
cggtggcgcatttgccatttccggtgaacggaataggaggaagggaagttcagtgttggtggagggattgtgtggagacggtggagaagaacgccatgga |
2783599 |
T |
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| Q |
219 |
cgacggtgatgttcgccggagatttgttagggttccggtgagaatgaaatgagatagttgtccgtaatttttgttcggtttgaaattgaa |
308 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2783600 |
cgacggcaatgttcgccggagatttgttagggttccggtgagaatgaaatgagatagttgtccgtaatttttgttcggtttgaaattgaa |
2783689 |
T |
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