View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13763_high_110 (Length: 348)
Name: NF13763_high_110
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13763_high_110 |
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Alignment Details
Target: chr8 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 14 - 327
Target Start/End: Original strand, 4111558 - 4111873
Alignment:
| Q |
14 |
aaatcaatgtttttatcttcttttactttcatccttaagagatacgggtttcccaataaaggatttgctaagagaataattgaccagattccatcaataa |
113 |
Q |
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| T |
4111558 |
aaatcaatgtttttatcttcttttactttcatccttaagagatacgggtttcccaataaaggatttgcaaagagaataattgaccagat-ccatcaataa |
4111656 |
T |
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| Q |
114 |
aa-agaagttactcacctttactctttctctcgggacttaggattaggagtatctctcaactgagaaaaatacaaaatacagtatgattcatactccgta |
212 |
Q |
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| T |
4111657 |
aaaagaagttactcacctttactctttctctcgggacttaggattaggagtatctctcaactgagaaaaatacaaaatacagtatgattcatactccgta |
4111756 |
T |
|
| Q |
213 |
tactttagaagatccatgaatttattcatttcaaaagaatttgtg--acacaaatgaaaagtttacccttgaactnnnnnnntgaaatgcttcaccaatt |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||| ||||||||||||| |
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| T |
4111757 |
tactttagaagatccatgaatttattcatttcaaaagaatttgtggcacacaaatgaaaagtttacccttgagctaaaaaaatgaagtgcttcaccaatt |
4111856 |
T |
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| Q |
311 |
taacttcaaaaatgaaa |
327 |
Q |
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||||||||||||||||| |
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| T |
4111857 |
taacttcaaaaatgaaa |
4111873 |
T |
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