View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13763_high_147 (Length: 269)
Name: NF13763_high_147
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13763_high_147 |
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Alignment Details
Target: chr6 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 186048 - 185787
Alignment:
| Q |
1 |
agccatggtcacatgagaaatctgtcttggttaatgtaccaaagcatgtgctctcaaaacttgtaggatcagatttcacatacaaatacaaatccagtac |
100 |
Q |
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| T |
186048 |
agccatgggcacatgagaaatctgtcttggttaatgtaccaaagcatgtgctctcaaaacttgtaggatcagatttcacatacaaatacaaatccagtac |
185949 |
T |
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| Q |
101 |
aaaaatcacatgtacaaccaaaatatgtctagatgttggttcatgnnnnnnnnnnnnncacttcaacaaccataaaacagctgtataaacaaaagcacag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
185948 |
aaaaatcacatgtacaaccaaaatatgtctagatgttagttcatgaaaaattaaaaaacacttcaacaaccataaaacagctgtataaacaaaagcacag |
185849 |
T |
|
| Q |
201 |
catgcatgcactctcaattctctatttttcctatcttgataattaatttccttgtttttcat |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
185848 |
catgcatgcactctcaattctctatttttcctatcttgataattaatttccttgtttttcat |
185787 |
T |
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