View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13763_high_152 (Length: 259)

Name: NF13763_high_152
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13763_high_152
NF13763_high_152
[»] chr5 (46 HSPs)
chr5 (11-241)||(4292164-4292398)
chr5 (14-141)||(22482207-22482334)
chr5 (11-129)||(3667869-3667987)
chr5 (11-129)||(35760204-35760322)
chr5 (24-129)||(39987946-39988051)
chr5 (24-129)||(8049030-8049135)
chr5 (27-141)||(40495325-40495439)
chr5 (24-129)||(13253062-13253166)
chr5 (24-129)||(41834920-41835025)
chr5 (11-129)||(40791049-40791166)
chr5 (11-129)||(42146323-42146440)
chr5 (24-129)||(10058102-10058207)
chr5 (24-129)||(27021157-27021261)
chr5 (24-129)||(32030742-32030847)
chr5 (24-127)||(9275465-9275568)
chr5 (24-129)||(32454565-32454670)
chr5 (29-127)||(40885244-40885342)
chr5 (24-129)||(2430276-2430380)
chr5 (24-129)||(7385911-7386016)
chr5 (44-127)||(7178826-7178908)
chr5 (47-129)||(24045881-24045963)
chr5 (24-135)||(3060197-3060307)
chr5 (24-127)||(7714968-7715071)
chr5 (24-127)||(23914235-23914338)
chr5 (27-129)||(5710365-5710466)
chr5 (25-127)||(33953883-33953984)
chr5 (24-127)||(16158446-16158549)
chr5 (27-129)||(41740572-41740674)
chr5 (24-140)||(34106915-34107031)
chr5 (24-127)||(2483695-2483798)
chr5 (21-115)||(20068939-20069033)
chr5 (73-129)||(35847869-35847925)
chr5 (45-99)||(22811075-22811129)
chr5 (47-127)||(19784864-19784944)
chr5 (24-76)||(28869535-28869587)
chr5 (45-129)||(33467971-33468055)
chr5 (46-116)||(2861690-2861760)
chr5 (89-129)||(41741617-41741657)
chr5 (44-98)||(10372988-10373040)
chr5 (46-97)||(28304814-28304865)
chr5 (71-129)||(2694739-2694797)
chr5 (66-128)||(16843599-16843661)
chr5 (50-112)||(24036627-24036689)
chr5 (43-97)||(41959507-41959561)
chr5 (47-99)||(2868362-2868414)
chr5 (89-129)||(33082342-33082382)
[»] chr4 (78 HSPs)
chr4 (14-141)||(16566294-16566421)
chr4 (11-129)||(29149289-29149407)
chr4 (24-129)||(39636784-39636889)
chr4 (14-129)||(39187723-39187838)
chr4 (24-141)||(13167524-13167641)
chr4 (24-130)||(42944879-42944985)
chr4 (24-129)||(19592213-19592318)
chr4 (24-129)||(26651830-26651935)
chr4 (24-129)||(51922939-51923044)
chr4 (26-129)||(6138602-6138705)
chr4 (24-127)||(43772107-43772210)
chr4 (24-129)||(46830051-46830156)
chr4 (24-129)||(49519729-49519834)
chr4 (24-130)||(54150525-54150631)
chr4 (24-129)||(14564128-14564233)
chr4 (24-129)||(25312714-25312819)
chr4 (24-129)||(43781501-43781605)
chr4 (32-129)||(55638737-55638834)
chr4 (27-127)||(6505203-6505303)
chr4 (50-121)||(33574203-33574274)
chr4 (11-129)||(26426097-26426214)
chr4 (26-127)||(32238043-32238143)
chr4 (24-129)||(48407680-48407784)
chr4 (25-129)||(14072503-14072606)
chr4 (27-127)||(46926050-46926150)
chr4 (24-127)||(49136521-49136624)
chr4 (24-129)||(30842131-30842235)
chr4 (25-127)||(54153045-54153146)
chr4 (24-129)||(9889317-9889421)
chr4 (24-129)||(14076014-14076118)
chr4 (27-127)||(13183034-13183134)
chr4 (24-120)||(19599487-19599582)
chr4 (28-127)||(38263902-38264001)
chr4 (26-129)||(48550218-48550321)
chr4 (24-114)||(48550424-48550514)
chr4 (24-129)||(9893710-9893815)
chr4 (24-129)||(15603359-15603464)
chr4 (42-127)||(28987036-28987120)
chr4 (24-129)||(54735633-54735737)
chr4 (24-112)||(4954050-4954138)
chr4 (47-127)||(41866176-41866256)
chr4 (24-127)||(38306010-38306113)
chr4 (24-127)||(54488604-54488707)
chr4 (44-114)||(15619633-15619703)
chr4 (27-129)||(31520353-31520454)
chr4 (27-128)||(14054853-14054954)
chr4 (45-127)||(48908294-48908375)
chr4 (46-114)||(39993574-39993642)
chr4 (25-129)||(45779992-45780095)
chr4 (44-112)||(54487219-54487287)
chr4 (40-127)||(523165-523252)
chr4 (24-102)||(56241844-56241922)
chr4 (27-129)||(53531979-53532081)
chr4 (44-114)||(53914918-53914987)
chr4 (44-112)||(16492946-16493014)
chr4 (46-114)||(36150625-36150693)
chr4 (45-112)||(22699762-22699829)
chr4 (45-112)||(22980701-22980768)
chr4 (45-112)||(22994288-22994355)
chr4 (14-129)||(38694037-38694152)
chr4 (27-97)||(2175161-2175231)
chr4 (83-129)||(4649911-4649957)
chr4 (58-127)||(48556585-48556655)
chr4 (39-128)||(38740286-38740374)
chr4 (26-127)||(8683012-8683115)
chr4 (51-91)||(47384987-47385027)
chr4 (52-130)||(22694578-22694656)
chr4 (49-112)||(46958047-46958110)
chr4 (49-130)||(28947730-28947811)
chr4 (45-127)||(40286302-40286383)
chr4 (45-115)||(40335636-40335706)
chr4 (80-129)||(1616515-1616563)
chr4 (44-85)||(8754177-8754217)
chr4 (40-97)||(13788144-13788201)
chr4 (46-127)||(14597609-14597689)
chr4 (24-105)||(26824224-26824305)
chr4 (89-129)||(16202532-16202572)
chr4 (44-112)||(39438880-39438948)
[»] chr2 (47 HSPs)
chr2 (14-141)||(1945007-1945134)
chr2 (11-129)||(2213516-2213634)
chr2 (26-129)||(9988481-9988584)
chr2 (11-129)||(28127267-28127385)
chr2 (26-141)||(5916210-5916324)
chr2 (26-141)||(36312302-36312416)
chr2 (24-129)||(2213670-2213775)
chr2 (24-129)||(7472654-7472758)
chr2 (44-129)||(30007533-30007618)
chr2 (24-129)||(34433286-34433392)
chr2 (27-127)||(7296181-7296281)
chr2 (24-127)||(26207911-26208014)
chr2 (24-127)||(31224703-31224806)
chr2 (42-129)||(45714648-45714735)
chr2 (27-129)||(44619041-44619143)
chr2 (41-129)||(2215292-2215380)
chr2 (24-127)||(42089510-42089617)
chr2 (24-129)||(39141450-39141554)
chr2 (31-127)||(32502016-32502111)
chr2 (24-127)||(14821186-14821288)
chr2 (44-127)||(25747864-25747946)
chr2 (43-129)||(8170355-8170440)
chr2 (45-127)||(36548243-36548325)
chr2 (27-127)||(7295330-7295428)
chr2 (43-128)||(41580691-41580776)
chr2 (44-129)||(3853943-3854028)
chr2 (24-129)||(28261317-28261422)
chr2 (41-128)||(38600424-38600511)
chr2 (44-129)||(18511145-18511230)
chr2 (33-120)||(8041311-8041397)
chr2 (46-129)||(16467131-16467214)
chr2 (24-127)||(42515958-42516060)
chr2 (24-129)||(31562667-31562769)
chr2 (27-112)||(27911432-27911517)
chr2 (50-127)||(34997218-34997295)
chr2 (45-127)||(12110918-12110999)
chr2 (27-129)||(23358284-23358385)
chr2 (49-127)||(28641690-28641768)
chr2 (45-97)||(23377548-23377600)
chr2 (73-128)||(23267345-23267400)
chr2 (45-112)||(23359927-23359994)
chr2 (45-129)||(1763264-1763347)
chr2 (45-105)||(30599908-30599968)
chr2 (47-98)||(10918649-10918700)
chr2 (44-77)||(11240714-11240747)
chr2 (27-127)||(3602442-3602541)
chr2 (47-127)||(43858194-43858274)
[»] chr1 (51 HSPs)
chr1 (22-129)||(1199863-1199970)
chr1 (14-141)||(20800248-20800375)
chr1 (14-141)||(35569173-35569300)
chr1 (24-129)||(48510946-48511051)
chr1 (24-129)||(31223412-31223517)
chr1 (24-129)||(42850202-42850307)
chr1 (24-129)||(43728861-43728965)
chr1 (14-129)||(25230035-25230149)
chr1 (24-127)||(47123424-47123527)
chr1 (44-129)||(15884285-15884370)
chr1 (44-129)||(49242965-49243050)
chr1 (27-127)||(13056039-13056138)
chr1 (24-127)||(7826339-7826442)
chr1 (43-129)||(10470647-10470732)
chr1 (27-141)||(12468253-12468366)
chr1 (24-129)||(6166148-6166252)
chr1 (31-127)||(11023315-11023410)
chr1 (24-127)||(34718489-34718592)
chr1 (24-127)||(45710087-45710189)
chr1 (24-129)||(5410678-5410782)
chr1 (24-112)||(11561860-11561948)
chr1 (26-129)||(27801635-27801738)
chr1 (27-129)||(50977323-50977424)
chr1 (24-129)||(6464646-6464750)
chr1 (24-129)||(50406168-50406273)
chr1 (24-112)||(4369803-4369890)
chr1 (27-127)||(12247461-12247560)
chr1 (26-129)||(26058281-26058384)
chr1 (24-127)||(40229455-40229558)
chr1 (46-129)||(40352451-40352533)
chr1 (45-127)||(4347033-4347114)
chr1 (24-129)||(36205229-36205334)
chr1 (24-127)||(35536110-35536212)
chr1 (24-126)||(13931661-13931762)
chr1 (68-129)||(43134532-43134593)
chr1 (44-112)||(23628706-23628773)
chr1 (24-127)||(25061264-25061367)
chr1 (73-129)||(29441271-29441327)
chr1 (45-129)||(47981779-47981862)
chr1 (51-114)||(47085898-47085961)
chr1 (49-127)||(13344836-13344913)
chr1 (50-127)||(41989-42066)
chr1 (14-84)||(40821853-40821922)
chr1 (27-100)||(291729-291802)
chr1 (24-129)||(9447571-9447674)
chr1 (45-97)||(29759710-29759762)
chr1 (45-97)||(43730059-43730111)
chr1 (69-120)||(34661946-34661996)
chr1 (47-114)||(47978359-47978426)
chr1 (81-122)||(43134454-43134495)
chr1 (27-127)||(15576495-15576595)
[»] chr7 (48 HSPs)
chr7 (24-129)||(48459745-48459850)
chr7 (14-141)||(37639455-37639582)
chr7 (24-129)||(3622429-3622534)
chr7 (14-129)||(10371927-10372042)
chr7 (14-129)||(38230093-38230208)
chr7 (26-129)||(37562607-37562710)
chr7 (24-129)||(3375525-3375630)
chr7 (24-129)||(44967368-44967473)
chr7 (24-127)||(47021954-47022057)
chr7 (24-129)||(3342825-3342930)
chr7 (11-127)||(43631667-43631782)
chr7 (41-129)||(3750738-3750826)
chr7 (27-127)||(47217512-47217612)
chr7 (11-118)||(42740414-42740521)
chr7 (24-122)||(42904588-42904686)
chr7 (50-127)||(46541661-46541738)
chr7 (24-127)||(386452-386555)
chr7 (24-129)||(9456140-9456244)
chr7 (24-129)||(34010375-34010479)
chr7 (24-127)||(39391108-39391211)
chr7 (26-129)||(41715694-41715797)
chr7 (27-129)||(34365951-34366052)
chr7 (45-127)||(42752162-42752244)
chr7 (24-129)||(36920147-36920252)
chr7 (50-129)||(12632052-12632131)
chr7 (26-129)||(32186977-32187080)
chr7 (46-129)||(39634134-39634217)
chr7 (27-129)||(24770880-24770982)
chr7 (50-127)||(12964659-12964736)
chr7 (24-129)||(43737908-43738013)
chr7 (24-108)||(32205960-32206044)
chr7 (24-127)||(34010932-34011035)
chr7 (27-127)||(48134618-48134717)
chr7 (46-127)||(39977609-39977690)
chr7 (49-130)||(20088929-20089010)
chr7 (24-124)||(37008325-37008424)
chr7 (83-129)||(12212438-12212484)
chr7 (75-129)||(19097483-19097537)
chr7 (44-98)||(29829310-29829364)
chr7 (49-98)||(38494276-38494325)
chr7 (27-127)||(40903139-40903238)
chr7 (21-127)||(2839323-2839428)
chr7 (45-127)||(4228603-4228684)
chr7 (30-88)||(15311226-15311284)
chr7 (87-129)||(25472150-25472192)
chr7 (47-99)||(16079460-16079512)
chr7 (89-129)||(25472165-25472205)
chr7 (24-127)||(46285312-46285414)
[»] chr8 (55 HSPs)
chr8 (22-129)||(22936775-22936882)
chr8 (24-129)||(3467555-3467660)
chr8 (14-129)||(41289040-41289155)
chr8 (24-129)||(25697942-25698046)
chr8 (24-129)||(3097188-3097293)
chr8 (14-102)||(43550903-43550991)
chr8 (24-127)||(440173-440276)
chr8 (27-130)||(25497717-25497819)
chr8 (11-114)||(40742133-40742236)
chr8 (24-129)||(15206718-15206823)
chr8 (24-129)||(44926863-44926967)
chr8 (24-128)||(33627017-33627121)
chr8 (25-129)||(36121527-36121630)
chr8 (24-138)||(26243146-26243260)
chr8 (24-129)||(42143346-42143451)
chr8 (24-127)||(6399092-6399195)
chr8 (24-127)||(28425456-28425559)
chr8 (53-132)||(30759284-30759363)
chr8 (42-129)||(38114485-38114571)
chr8 (24-129)||(4941763-4941868)
chr8 (24-141)||(24897558-24897674)
chr8 (24-129)||(27649768-27649872)
chr8 (24-127)||(8124993-8125095)
chr8 (24-127)||(31246299-31246402)
chr8 (42-129)||(40742277-40742364)
chr8 (11-129)||(36114023-36114140)
chr8 (26-129)||(35615733-35615836)
chr8 (24-129)||(38152157-38152261)
chr8 (26-114)||(42149029-42149117)
chr8 (46-127)||(30081635-30081715)
chr8 (73-129)||(3465422-3465478)
chr8 (26-129)||(36779414-36779517)
chr8 (24-129)||(26490955-26491060)
chr8 (80-129)||(30085621-30085670)
chr8 (45-97)||(19649229-19649281)
chr8 (87-127)||(29023308-29023348)
chr8 (44-127)||(8702392-8702474)
chr8 (51-97)||(10552923-10552969)
chr8 (45-127)||(29970845-29970926)
chr8 (24-93)||(34342872-34342940)
chr8 (24-127)||(3619053-3619155)
chr8 (43-115)||(23018137-23018209)
chr8 (46-105)||(39219765-39219824)
chr8 (49-112)||(42600968-42601031)
chr8 (11-114)||(45147247-45147350)
chr8 (27-97)||(1373064-1373134)
chr8 (48-114)||(2071565-2071630)
chr8 (87-129)||(26125842-26125884)
chr8 (46-112)||(37667057-37667122)
chr8 (50-127)||(40792188-40792264)
chr8 (47-127)||(22552724-22552804)
chr8 (101-129)||(26125826-26125854)
chr8 (89-129)||(26575890-26575930)
chr8 (55-99)||(31895765-31895809)
chr8 (44-84)||(32767479-32767519)
[»] chr3 (55 HSPs)
chr3 (11-129)||(26519665-26519783)
chr3 (24-129)||(50664772-50664877)
chr3 (24-129)||(10334152-10334257)
chr3 (45-129)||(23496352-23496436)
chr3 (24-129)||(10853249-10853354)
chr3 (24-129)||(38172289-38172394)
chr3 (11-129)||(35425335-35425452)
chr3 (24-127)||(8424714-8424816)
chr3 (24-129)||(3348257-3348362)
chr3 (24-129)||(4984595-4984700)
chr3 (37-129)||(55154529-55154620)
chr3 (24-127)||(42318344-42318446)
chr3 (24-127)||(52966793-52966896)
chr3 (24-127)||(53074917-53075019)
chr3 (24-129)||(30811514-30811618)
chr3 (24-129)||(42475723-42475828)
chr3 (27-127)||(15511360-15511459)
chr3 (24-140)||(44224776-44224892)
chr3 (43-127)||(48189426-48189509)
chr3 (44-127)||(34561142-34561225)
chr3 (46-129)||(38340841-38340924)
chr3 (24-114)||(31084222-31084311)
chr3 (24-129)||(20813160-20813264)
chr3 (24-129)||(21225004-21225109)
chr3 (24-129)||(38125424-38125528)
chr3 (27-127)||(23207052-23207152)
chr3 (42-129)||(35930770-35930857)
chr3 (41-127)||(19877448-19877534)
chr3 (27-120)||(53179865-53179958)
chr3 (24-123)||(29716674-29716773)
chr3 (44-127)||(44939400-44939482)
chr3 (24-114)||(25848046-25848136)
chr3 (24-129)||(16246078-16246181)
chr3 (46-129)||(40415278-40415361)
chr3 (24-114)||(30809942-30810032)
chr3 (44-130)||(49526650-49526736)
chr3 (51-130)||(22737055-22737134)
chr3 (45-99)||(7012675-7012729)
chr3 (49-99)||(23918881-23918931)
chr3 (73-127)||(52813278-52813332)
chr3 (27-128)||(14651085-14651185)
chr3 (27-128)||(31766159-31766259)
chr3 (46-129)||(42644298-42644381)
chr3 (45-127)||(21023201-21023281)
chr3 (45-127)||(44225600-44225681)
chr3 (49-97)||(10852727-10852775)
chr3 (45-129)||(25181245-25181328)
chr3 (101-132)||(31618391-31618422)
chr3 (98-129)||(35930876-35930907)
chr3 (48-86)||(38626750-38626788)
chr3 (43-97)||(52931586-52931640)
chr3 (46-127)||(53078394-53078474)
chr3 (89-129)||(11264360-11264400)
chr3 (24-68)||(31618930-31618974)
chr3 (44-84)||(41591308-41591348)
[»] chr6 (27 HSPs)
chr6 (14-129)||(17829980-17830095)
chr6 (24-129)||(10826105-10826210)
chr6 (24-129)||(13739220-13739324)
chr6 (24-129)||(13744720-13744824)
chr6 (24-129)||(33898987-33899092)
chr6 (24-127)||(6208047-6208149)
chr6 (14-100)||(16548143-16548229)
chr6 (26-114)||(16442347-16442435)
chr6 (14-127)||(31132468-31132580)
chr6 (24-127)||(29409235-29409338)
chr6 (44-127)||(1312423-1312506)
chr6 (44-127)||(21254863-21254945)
chr6 (24-128)||(699571-699674)
chr6 (46-129)||(5584031-5584113)
chr6 (68-129)||(32599444-32599505)
chr6 (73-129)||(15151487-15151543)
chr6 (57-129)||(29399775-29399846)
chr6 (24-127)||(16121985-16122088)
chr6 (25-128)||(21455897-21455998)
chr6 (44-110)||(882776-882842)
chr6 (25-129)||(7215590-7215692)
chr6 (45-105)||(29682202-29682262)
chr6 (48-127)||(3605736-3605814)
chr6 (46-129)||(26274609-26274691)
chr6 (29-127)||(1499975-1500072)
chr6 (44-97)||(20846417-20846470)
chr6 (46-130)||(5456031-5456114)
[»] scaffold0005 (2 HSPs)
scaffold0005 (24-129)||(253142-253247)
scaffold0005 (46-127)||(219689-219769)
[»] scaffold0369 (1 HSPs)
scaffold0369 (27-141)||(8466-8580)
[»] scaffold0007 (1 HSPs)
scaffold0007 (24-127)||(29107-29209)
[»] scaffold0217 (1 HSPs)
scaffold0217 (27-127)||(2011-2111)
[»] scaffold0394 (1 HSPs)
scaffold0394 (59-129)||(5812-5882)
[»] scaffold0381 (1 HSPs)
scaffold0381 (24-129)||(9125-9229)
[»] scaffold0983 (1 HSPs)
scaffold0983 (30-127)||(2252-2349)
[»] scaffold0014 (1 HSPs)
scaffold0014 (24-128)||(118393-118497)
[»] scaffold0172 (1 HSPs)
scaffold0172 (45-127)||(15242-15323)
[»] scaffold0015 (1 HSPs)
scaffold0015 (46-128)||(65536-65617)
[»] scaffold0128 (1 HSPs)
scaffold0128 (40-97)||(38369-38426)
[»] scaffold0041 (1 HSPs)
scaffold0041 (27-127)||(46780-46879)
[»] scaffold0003 (1 HSPs)
scaffold0003 (47-115)||(301562-301630)
[»] scaffold0020 (1 HSPs)
scaffold0020 (24-98)||(138521-138595)
[»] scaffold0009 (1 HSPs)
scaffold0009 (49-99)||(199381-199431)
[»] scaffold0068 (1 HSPs)
scaffold0068 (89-129)||(38372-38412)


Alignment Details
Target: chr5 (Bit Score: 174; Significance: 1e-93; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 4292164 - 4292398
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| ||    
T  4292164 aatatcaaccaacaagaatcacttctaattaagtgtatccaaacataaatcaattcacattcaacttatttttaatcaaaatcaattctctcaaacttaa 4292263  T
Q  111 ttctatcaaaatcaattcttcctgccgccatccgaa----agagtgacacttggtcaatgtttaatgtgaaaatgatatagtggccccctcatgacctaa 206  Q
    ||||||||||||||||||||||||||||||||| ||    |||| |||| ||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  4292264 ttctatcaaaatcaattcttcctgccgccatcccaaacacagagcgacagttgctcaaagtttaatgtaaaaatgatatagtggccccctcatgacctaa 4292363  T
Q  207 caaactaaccagatcctccccatttttgcaaaatg 241  Q
    |||||||||||||||||||||||||||||||||||    
T  4292364 caaactaaccagatcctccccatttttgcaaaatg 4292398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 22482207 - 22482334
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattc 113  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||    
T  22482207 atcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattc 22482306  T
Q  114 tatcaaaatcaattcttcctgccgccat 141  Q
    |||||||||||||||| || ||||||||    
T  22482307 tatcaaaatcaattctccccgccgccat 22482334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 3667869 - 3667987
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    ||||||||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| | |||||| |||||||||||||||||    
T  3667869 aatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttaacaaaatcaattctctcaaactcaa 3667968  T
Q  111 ttctatcaaaatcaattct 129  Q
    |||||||||||||||||||    
T  3667969 ttctatcaaaatcaattct 3667987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 35760204 - 35760322
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    ||||||||| || || ||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| | |||||| |||||||||||||||||    
T  35760204 aatatcaactaataaaaatcagttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaa 35760303  T
Q  111 ttctatcaaaatcaattct 129  Q
    |||||||||||||||||||    
T  35760304 ttctatcaaaatcaattct 35760322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 39988051 - 39987946
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |  |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  39988051 aagaatcacttttaaataagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 39987952  T
Q  124 aattct 129  Q
    ||||||    
T  39987951 aattct 39987946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 8049135 - 8049030
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| || |  |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  8049135 aagaatcacttttaaataagtgtatccaaacataaatcaattaacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 8049036  T
Q  124 aattct 129  Q
    ||||||    
T  8049035 aattct 8049030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 40495439 - 40495325
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||  |||||| ||||||||||||| |||| | ||||||||||||||||||||||||||    
T  40495439 aatcacttttaaaaaagtgtatccaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatcaaaatcaat 40495340  T
Q  127 tcttcctgccgccat 141  Q
    |||||| ||||||||    
T  40495339 tcttcccgccgccat 40495325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 13253166 - 13253062
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | ||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  13253166 aagaatcacttttaaatgagtgtatccaaacataa-tcaattcatattcaactcacttttaaccaaaatcaattctttcaaactcaattctatcaaaatc 13253068  T
Q  124 aattct 129  Q
    ||||||    
T  13253067 aattct 13253062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 41834920 - 41835025
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| || | |||||||||||||||||||||||||||| | ||||||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  41834920 aagaatcacttctagtaaagtgtatccaaacataaatcaattcacttccaactcacttttaaccaaaatcaattctctcaaactgaattctatcaaaatc 41835019  T
Q  124 aattct 129  Q
    ||||||    
T  41835020 aattct 41835025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 40791166 - 40791049
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    |||||||||  | |||||||||||||||||||| |||||||||||||| |||||||| ||  |||||| ||||||||||||| |||| ||||||||||||    
T  40791166 aatatcaactcaaaagaatcacttttaattaagcgtatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaa 40791068  T
Q  111 ttctatcaaaatcaattct 129  Q
    |||||||||||||||||||    
T  40791067 ttctatcaaaatcaattct 40791049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 42146323 - 42146440
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    |||||||||  | |||||||||||||||||||| |||||||||||||| |||||||| ||  |||||| ||||||||||||| |||| ||||||||||||    
T  42146323 aatatcaactcaaaagaatcacttttaattaagcgtatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaa 42146421  T
Q  111 ttctatcaaaatcaattct 129  Q
    |||||||||||||||||||    
T  42146422 ttctatcaaaatcaattct 42146440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 10058102 - 10058207
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| || | |||||||||||||||||||||||||||  | ||||||| ||||||||||||| ||| ||||||||||||||| ||||||||||    
T  10058102 aagaatcacttctagtaaagtgtatccaaacataaatcaattcatttccaactcacttttaaccaaaatcaatactctcaaactcaattatatcaaaatc 10058201  T
Q  124 aattct 129  Q
    ||||||    
T  10058202 aattct 10058207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 27021157 - 27021261
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | ||| || ||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  27021157 aagaatcacttttaagtgagtata-ccaaacataaatcaattcacatttaactcatttttaaccaaaatcaattttctcaaactcaattatatcaaaatc 27021255  T
Q  124 aattct 129  Q
    | ||||    
T  27021256 agttct 27021261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 32030742 - 32030847
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||| | ||||| |||| ||||| ||||||||||||||  |||| | ||||||||||||| ||||||||||||||||||||||||||||||    
T  32030742 aagaatcacttttgaataagtatatcaaaacaaaaatcaattcacatctaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 32030841  T
Q  124 aattct 129  Q
    ||||||    
T  32030842 aattct 32030847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 9275568 - 9275465
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||| ||||| | ||||||||||||||||||||||||| ||||  |||||| ||||||||||||| |||||||| |||||||||| ||||||||||    
T  9275568 aagaatcaattttattaaagtgtatccaaacataaatcaattaacatctaactcacttttaaccaaaatcaattctcttaaactcaattttatcaaaatc 9275469  T
Q  124 aatt 127  Q
    ||||    
T  9275468 aatt 9275465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 32454565 - 32454670
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattct-atcaaaat 122  Q
    |||||||||||||||  |||||||||||||||||| ||||||||| |  |||||| ||||||||||||| ||||||||||||||||||||| ||||||||    
T  32454565 aagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctaatcaaaat 32454663  T
Q  123 caattct 129  Q
    |||||||    
T  32454664 caattct 32454670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 40885244 - 40885342
Alignment:
Q  29 tcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||  |||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||| ||||||||||||| |||||||||||    
T  40885244 tcacttttaaacaagtgtgtccaaacataaatcaattcacatccaactcacttttaatcaaaatcaattctcttaaactcaattctaacaaaatcaatt 40885342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 2430380 - 2430276
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| || | |||||||||||||||||| ||||||||  ||||||||| ||||||||||||| |||||||||||||||||||| ||||||||     
T  2430380 aagaatcacttctattgaagtgtatccaaacataa-tcaattcatgttcaactcacttttaaccaaaatcaattctctcaaactcaattccatcaaaatg 2430282  T
Q  124 aattct 129  Q
    ||||||    
T  2430281 aattct 2430276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 7386016 - 7385911
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| |||||||||  |||||||||||||||||| |  ||| || ||||||||||||| |||||||| ||||| |||||||||||||||    
T  7386016 aagaatcacttttaaataagtgtatttaaacataaatcaattcacctcaaacccacttttaaccaaaatcaattctctaaaacttaattctatcaaaatc 7385917  T
Q  124 aattct 129  Q
    ||||||    
T  7385916 aattct 7385911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 7178826 - 7178908
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||| ||||||    
T  7178826 tgtatccaaacataaatcaatt-acattcaactcacttttagtcaaaattaattctctcaaactcaattctatcaaactcaatt 7178908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 24045881 - 24045963
Alignment:
Q  47 atccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||||||||||||||||   ||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  24045881 atccaaacataaatcaattcacatcagactcacttttaaccaaaatcaattctctcaaattcaattctatcaaaatcaattct 24045963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 3060307 - 3060197
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||| || | ||| ||||||||||||||| |||||| ||  |||||| |||||| |||||| |||||||||||||| |||||||||||||||    
T  3060307 aagaatcacttt-aagtgagtatatccaaacataaattaattcatataaaactcacttttaatcaaaatcaattctctcaaacttaattctatcaaaatc 3060209  T
Q  124 aattcttcctgc 135  Q
    ||||||| ||||    
T  3060208 aattcttactgc 3060197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 7714968 - 7715071
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||| ||| || | ||||| || ||||||| ||||||||| ||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  7714968 aagaatcaatttcaagtgagtgtgtcaaaacatatatcaattcatatctaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 7715067  T
Q  124 aatt 127  Q
    ||||    
T  7715068 aatt 7715071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 23914338 - 23914235
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| |  |||||||||||| |||||||||||| || ||||||| ||||||  | ||| |||||||||||| |||||||||||||||||    
T  23914338 aagaatcacttttaaatgggtgtatccaaacgtaaatcaattcatatccaactcaattttaagtataatcaattctctcaaaatcaattctatcaaaatc 23914239  T
Q  124 aatt 127  Q
    ||||    
T  23914238 aatt 23914235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 5710466 - 5710365
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    |||||||| |||| ||| ||||||||||||||| |||||||||   |||||| ||||||||||||| |||||| |||||||| |||||||||||||||||    
T  5710466 aatcacttgtaat-aagcgtatccaaacataaagcaattcacaccaaactcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaat 5710368  T
Q  127 tct 129  Q
    |||    
T  5710367 tct 5710365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 33953984 - 33953883
Alignment:
Q  25 agaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatca 124  Q
    |||||||||| || | |||||||||||||||||| |||||| || ||||||||| ||||||  ||||| |||||||||||||||||||||| ||||||||    
T  33953984 agaatcacttctattaaagtgtatccaaacataa-tcaatttacgttcaactcacttttaaataaaatcaattctctcaaactcaattctaccaaaatca 33953886  T
Q  125 att 127  Q
    |||    
T  33953885 att 33953883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 16158549 - 16158446
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||||  ||||| ||||||| |||||| |||||||||  |||||| |||||| |||||| |||||| |||||||||| ||||| ||||||    
T  16158549 aagaatcacttttaaaaaagtgcatccaaatataaattaattcacatcaaactcacttttaatcaaaatcaattctttcaaactcaaatctataaaaatc 16158450  T
Q  124 aatt 127  Q
    ||||    
T  16158449 aatt 16158446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 41740674 - 41740572
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||||  |||||||| |||||||||| |||||||  |  ||||||  | ||| |||||| |||||||||||||||||||||||||||||||||    
T  41740674 aatcacttttaaacaagtgtattcaaacataaaccaattcatctcaaactcacctataatcaaaatcaattctctcaaactcaattctatcaaaatcaat 41740575  T
Q  127 tct 129  Q
    |||    
T  41740574 tct 41740572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 34107031 - 34106915
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||| |||||||| | | |||||  |||||| |||||||||||||  |||||| ||||||||||||  |||||| | |||||||||||||||||||||    
T  34107031 aagaattacttttaaatgaatgtatttaaacattaatcaattcacatctaactcacttttaaccaaaaacaattcttttaaactcaattctatcaaaatc 34106932  T
Q  124 aattcttcctgccgcca 140  Q
    |||| |  |||||||||    
T  34106931 aattttgtctgccgcca 34106915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 2483798 - 2483695
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||  ||||   ||||||||||||||||||||||||||||||||| ||||||| ||||| |||||   |||| |||||| | || |||||    
T  2483798 aagaatcacttttgcttaaagttatccaaacataaatcaattcacattcaactcacttttaactaaaatcaattccaacaaaatcaattatgtccaaatc 2483699  T
Q  124 aatt 127  Q
    ||||    
T  2483698 aatt 2483695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 20068939 - 20069033
Alignment:
Q  21 aacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattcta 115  Q
    ||||||||||||||||   | ||||||||||||||||||| |||| | | |||||||| |||| |||||||| |||||  |||||||||||||||    
T  20068939 aacaagaatcacttttgcattagtgtatccaaacataaataaatttaaactcaactcacttttgaccaaaatcaattcgatcaaactcaattcta 20069033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 35847925 - 35847869
Alignment:
Q  73 aactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||| || |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  35847925 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 35847869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 22811075 - 22811129
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattct 99  Q
    |||||||||||||||||| || |||||||||||| ||||||||||||| ||||||    
T  22811075 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 22811129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 19784864 - 19784944
Alignment:
Q  47 atccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||||| || || |||||||||||| ||||||||||||| |||||    ||| ||||||| |||||||||||||    
T  19784864 atccaaacataaaccactttacattcaactcacttttaaccaaaatcaattcaaataaaatcaattcaatcaaaatcaatt 19784944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 28869587 - 28869535
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaact 76  Q
    ||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||    
T  28869587 aagaatcacttttaagtaagtgtattcaaacataaatcaatccacatccaact 28869535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 33468055 - 33467971
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||| ||||||||  ||| |||||||| ||||||||||||| | |||| ||||| |||||| | | ||||||||||||    
T  33468055 gtatccaaacacaaatcaatatacactcaactcacttttaaccaaaatcagttctatcaaaatcaattttgttaaaatcaattct 33467971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 2861690 - 2861760
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctat 116  Q
    |||||||||||||||||||| |||| ||| |||||||||||  |||| |||| | ||||| ||||||||||    
T  2861690 tatccaaacataaatcaatttacatgcaagtcatttttaactcaaatcaattatatcaaaatcaattctat 2861760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 41741657 - 41741617
Alignment:
Q  89 aaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  41741657 aaattaattctttcaaaatcaattctatcaaaatcaattct 41741617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 10372988 - 10373040
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattc 98  Q
    |||||||||||||||| || || ||||||||||||||||||  ||||||||||||    
T  10372988 tgtatccaaacataaaccagtttacattcaactcattttta--caaaattaattc 10373040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 28304865 - 28304814
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaatt 97  Q
    |||||||| |||||||| ||| ||||||||||||||||||| ||||| ||||    
T  28304865 tatccaaatataaatcatttcccattcaactcatttttaactaaaataaatt 28304814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 2694797 - 2694739
Alignment:
Q  71 tcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||| ||||||||||||| |||||  ||||| ||||||||  |||||||||||||    
T  2694797 tcaactcacttttaaccaaaatcaattcaatcaaaatcaattctgacaaaatcaattct 2694739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 16843599 - 16843661
Alignment:
Q  66 cacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattc 128  Q
    ||||| ||| ||| |||||||||||||  ||||  |||||||||||| |||||||||||||||    
T  16843599 cacatccaattcacttttaaccaaaatctattcgttcaaactcaattatatcaaaatcaattc 16843661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 24036627 - 24036689
Alignment:
Q  50 caaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    ||||||||||||| || |||||||||||| |||| | |||||| |||||| ||||| ||||||    
T  24036627 caaacataaatcattttacattcaactcacttttcatcaaaatcaattctatcaaaatcaatt 24036689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 41959507 - 41959561
Alignment:
Q  43 gtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaatt 97  Q
    |||| ||||||||||||| ||||||| || |||||| ||||||| ||||||||||    
T  41959507 gtgtttccaaacataaattaattcacttttaactcacttttaactaaaattaatt 41959561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 2868414 - 2868362
Alignment:
Q  47 atccaaacataaatcaattcacattcaactcatttttaaccaaaattaattct 99  Q
    |||||||| ||||||| || |||||||||||| ||||||| ||||| ||||||    
T  2868414 atccaaacttaaatcactttacattcaactcacttttaactaaaatcaattct 2868362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 33082382 - 33082342
Alignment:
Q  89 aaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||| |||||||||||| |||||||||||| ||||||||||    
T  33082382 aaatcaattctctcaaaatcaattctatcagaatcaattct 33082342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 1e-49; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 16566294 - 16566421
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattc 113  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  16566294 atcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattc 16566393  T
Q  114 tatcaaaatcaattcttcctgccgccat 141  Q
    |||||||||||||||| ||||| |||||    
T  16566394 tatcaaaatcaattctccctgctgccat 16566421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 29149407 - 29149289
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    ||||||||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| | |||||| |||||||||||||||||    
T  29149407 aatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaa 29149308  T
Q  111 ttctatcaaaatcaattct 129  Q
    |||||||||||||||||||    
T  29149307 ttctatcaaaatcaattct 29149289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 39636784 - 39636889
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  39636784 aagaatcacttttaagtaagtgtatccaaacataaatcaattcacatccaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatc 39636883  T
Q  124 aattct 129  Q
    ||||||    
T  39636884 aattct 39636889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 39187723 - 39187838
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattc 113  Q
    |||||| |||||||||||||| || | |||||||||||||||||||||||||||||||||| | | ||||||||||||| ||||||||||||||||||||    
T  39187723 atcaactaacaagaatcacttctagtaaagtgtatccaaacataaatcaattcacattcaaattacttttaaccaaaatcaattctctcaaactcaattc 39187822  T
Q  114 tatcaaaatcaattct 129  Q
    ||||||||||||||||    
T  39187823 tatcaaaatcaattct 39187838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 13167524 - 13167641
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| |  ||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||    
T  13167524 aagaatcacttttaaatgggtgtatccaaatataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatc 13167623  T
Q  124 aattcttcctgccgccat 141  Q
    |||| ||||| |||||||    
T  13167624 aatttttcctaccgccat 13167641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 42944985 - 42944879
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||     
T  42944985 aagaatcacttttaagtaagtatatctaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaata 42944886  T
Q  124 aattctt 130  Q
    |||||||    
T  42944885 aattctt 42944879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 19592318 - 19592213
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||| | |||||||||||||||||||||||||||| | ||||||| ||||||||||||| |||||||| |||||||||||||||||||||    
T  19592318 aagaatcacttttagtaaagtgtatccaaacataaatcaattcacttccaactcacttttaaccaaaatcaattctctaaaactcaattctatcaaaatc 19592219  T
Q  124 aattct 129  Q
    ||||||    
T  19592218 aattct 19592213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 26651935 - 26651830
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||| ||||||| | ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  26651935 aagaattacttttagtaaagtgtatctaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattctatcaaaatc 26651836  T
Q  124 aattct 129  Q
    ||||||    
T  26651835 aattct 26651830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 51922939 - 51923044
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||| ||||||| | ||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| |||||||    
T  51922939 aagaattacttttagtaaagtgtatccaaacataaatcaattcagattcaactcacttttaaccaaaatcaattctctcaaactcaattctaacaaaatc 51923038  T
Q  124 aattct 129  Q
    ||||||    
T  51923039 aattct 51923044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 6138705 - 6138602
Alignment:
Q  26 gaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaa 125  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||| | |||||||||||||||||||||||||    
T  6138705 gaatcatttttaaataagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattatttcaaactcaattctatcaaaatcaa 6138606  T
Q  126 ttct 129  Q
    ||||    
T  6138605 ttct 6138602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 43772210 - 43772107
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| |||  ||||||||||||||||||||| |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  43772210 aagaatcacttctaaaaaagtgtatccaaacataaatcgattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 43772111  T
Q  124 aatt 127  Q
    ||||    
T  43772110 aatt 43772107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 46830156 - 46830051
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||| || |||||||||||||||||||||    
T  46830156 aagaatcaattttaagaaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatc 46830057  T
Q  124 aattct 129  Q
    ||||||    
T  46830056 aattct 46830051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 49519729 - 49519834
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||| ||||||  |||||||||||||||||||| ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| |    
T  49519729 aagaatcatttttaagcaagtgtatccaaacataaataaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaacc 49519828  T
Q  124 aattct 129  Q
    ||||||    
T  49519829 aattct 49519834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 54150525 - 54150631
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||| ||||||  ||||||||||||||| ||||||||||||||  |||||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  54150525 aagaatcatttttaacgaagtgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatc 54150624  T
Q  124 aattctt 130  Q
    |||||||    
T  54150625 aattctt 54150631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 14564233 - 14564128
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | |  ||||||||||||||||||||||| || |||||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  14564233 aagaatcacttttaactgaaggtatccaaacataaatcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaattctatcaaaatc 14564134  T
Q  124 aattct 129  Q
    ||||||    
T  14564133 aattct 14564128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 25312714 - 25312819
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||| |||||||  ||||||||||||||| ||||||||||||||  |||||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  25312714 aagaatcgcttttaacaaagtgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatc 25312813  T
Q  124 aattct 129  Q
    ||||||    
T  25312814 aattct 25312819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 43781605 - 43781501
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||||  |||||||||||||||||| ||||||||| |  |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  43781605 aagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 43781507  T
Q  124 aattct 129  Q
    ||||||    
T  43781506 aattct 43781501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 55638834 - 55638737
Alignment:
Q  32 cttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||| |||||||||| ||||||||||||||| ||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  55638834 cttttaaataagtgtatctaaacataaatcaatttacatttaactcacttttaacaaaaatcaattctctcaaactcaattctatcaaaatcaattct 55638737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 6505203 - 6505303
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    |||||||||||  | |||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  6505203 aatcacttttatatgagtgtatctaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattctctcaaactcaattctatcaaagtcaat 6505302  T
Q  127 t 127  Q
    |    
T  6505303 t 6505303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 33574203 - 33574274
Alignment:
Q  50 caaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaa 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33574203 caaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaa 33574274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 26426214 - 26426097
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    |||||||||  | |||||||||||||||||||| |||||||||||||| |||||| | ||  |||||| ||||||||||||| |||| ||||||||||||    
T  26426214 aatatcaactcaaaagaatcacttttaattaagcgtatccaaacataa-tcaatttatatctaactcacttttaaccaaaatcaattttctcaaactcaa 26426116  T
Q  111 ttctatcaaaatcaattct 129  Q
    |||||||||||||||||||    
T  26426115 ttctatcaaaatcaattct 26426097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 32238143 - 32238043
Alignment:
Q  26 gaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaa 125  Q
    ||||||||| ||||  |||||||||||||||||  |||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  32238143 gaatcacttctaatatagtgtatccaaacataac-caattcacattcaactcacttttaaccaaaatcaattcactcaaactcaattctatcaaaatcaa 32238045  T
Q  126 tt 127  Q
    ||    
T  32238044 tt 32238043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 48407784 - 48407680
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||| ||  |||||||||||||||||| ||||||||| |  |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  48407784 aagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 48407686  T
Q  124 aattct 129  Q
    ||||||    
T  48407685 aattct 48407680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 129
Target Start/End: Original strand, 14072503 - 14072606
Alignment:
Q  25 agaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatca 124  Q
    |||||||||| || | |||||||||||||||||| |||||| || ||||||||| |||||| |||||| |||||||||||||||||||||||||||||||    
T  14072503 agaatcacttctattaaagtgtatccaaacataa-tcaatttaccttcaactcacttttaaacaaaatcaattctctcaaactcaattctatcaaaatca 14072601  T
Q  125 attct 129  Q
    |||||    
T  14072602 attct 14072606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 46926050 - 46926150
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||||   |||||||||||||||||||||||||||||  |||||| ||||||||||||  |||| ||||||||||||||||||||||||||||    
T  46926050 aatcacttttaaacgagtgtatccaaacataaatcaattcacatctaactcacttttaaccaaaaacaattttctcaaactcaattctatcaaaatcaat 46926149  T
Q  127 t 127  Q
    |    
T  46926150 t 46926150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 49136521 - 49136624
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||  |||||| ||||||||| ||| ||||||||||||||||||| || || ||||    
T  49136521 aagaatcacttttaagtgagtgtatccaaacataaatcaattcacatcaaactcacttttaaccataatcaattctctcaaactcaattataccagaatc 49136620  T
Q  124 aatt 127  Q
    ||||    
T  49136621 aatt 49136624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 30842131 - 30842235
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||| ||  |||||||||||||||||| ||||||||| |  |||||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  30842131 aagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatc 30842229  T
Q  124 aattct 129  Q
    ||||||    
T  30842230 aattct 30842235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 54153045 - 54153146
Alignment:
Q  25 agaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatca 124  Q
    |||||||||| || | |||||||| ||||||||| ||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| ||| |||||||    
T  54153045 agaatcacttctagtaaagtgtattcaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattcactcaaactcaattatattaaaatca 54153143  T
Q  125 att 127  Q
    |||    
T  54153144 att 54153146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 9889421 - 9889317
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||| || | |||||||||||||||| | ||||||| ||  |||||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  9889421 aagaatcactttcaagtgagtgtatccaaacatata-caattcatatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatc 9889323  T
Q  124 aattct 129  Q
    ||||||    
T  9889322 aattct 9889317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 14076014 - 14076118
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| ||  ||| |||||||||||||||||| ||||  |||||| ||| ||||||||| |||| |||||||||||||||||||||||||    
T  14076014 aagaatcacttttaagtatatgtttccaaacataaatcaatttacatcaaactcacttt-aaccaaaatcaattttctcaaactcaattctatcaaaatc 14076112  T
Q  124 aattct 129  Q
    ||||||    
T  14076113 aattct 14076118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 13183134 - 13183034
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||| |||||| ||||||||||||||||||||||||||||| || ||||   ||||||||||||| |||| ||||| |||||||| |||||||||||||    
T  13183134 aatcatttttaaataagtgtatccaaacataaatcaattcaccttaaacttgcttttaaccaaaatcaattatctcagactcaattttatcaaaatcaat 13183035  T
Q  127 t 127  Q
    |    
T  13183034 t 13183034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 19599582 - 19599487
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaa 120  Q
    |||||||| |||||| ||| || ||||||||||||||||||| |||||||||||| |||||  |||||| |||||||||||||||||||||||||||    
T  19599582 aagaatcaattttaagtaattgcatccaaacataaatcaatt-acattcaactcacttttattcaaaatcaattctctcaaactcaattctatcaaa 19599487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 38263902 - 38264001
Alignment:
Q  28 atcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||| | ||| ||| ||||||||||| |||||||||  |||||| |||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  38263902 atcacttttaagtgagtatattcaaacataaattaattcacatcaaactcaattttaagcaaaattaattttctcaaactcaattatatcaaaatcaatt 38264001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 48550218 - 48550321
Alignment:
Q  26 gaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaa 125  Q
    |||| |||||||| | |||| ||||||||||||||||||| ||||  |||||| |||||| |||||| |||||||| ||| |||||||||||||||||||    
T  48550218 gaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaa 48550317  T
Q  126 ttct 129  Q
    ||||    
T  48550318 ttct 48550321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 48550514 - 48550424
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattct 114  Q
    ||||||||||| || | |||| ||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| ||||| ||||||||    
T  48550514 aagaatcacttctattaaagtttatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctatcaaaatcaattct 48550424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 9893710 - 9893815
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||| || |  ||||||||||||||| ||||||||| ||  |||||| |||| || ||||| |||||||||||| |||||||||||||||||    
T  9893710 aagaatcactttcaagtgggtgtatccaaacatatatcaattcatatctaactcacttttgacaaaaatcaattctctcaaattcaattctatcaaaatc 9893809  T
Q  124 aattct 129  Q
    ||||||    
T  9893810 aattct 9893815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 15603359 - 15603464
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||| ||||||  |||| |||| ||||| ||||||||||||||  |||||| |||| |||| ||| |||| |||||||||||||||||||||||||    
T  15603359 aagaatcatttttaagcaagtatatctaaacacaaatcaattcacatcaaactcactttttaccataatcaattatctcaaactcaattctatcaaaatc 15603458  T
Q  124 aattct 129  Q
    ||||||    
T  15603459 aattct 15603464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 28987036 - 28987120
Alignment:
Q  42 agtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||| ||||||||| ||||||||| |  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28987036 agtgtattcaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 28987120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 54735737 - 54735633
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| ||  ||| |||||||||||| ||||| ||||  |||||| ||| ||||||||| |||| |||||||||||||||||||||||||    
T  54735737 aagaatcacttttaagtatatgtttccaaacataaaccaatttacatcaaactcaattt-aaccaaaatcaattttctcaaactcaattctatcaaaatc 54735639  T
Q  124 aattct 129  Q
    ||||||    
T  54735638 aattct 54735633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 4954138 - 4954050
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    ||||||||||||||| | || ||| ||||||||||||||||||||||  |||||| ||||||||||||| |||||||||||| ||||||    
T  4954138 aagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaaactcacttttaaccaaaatcaattctctcaaaatcaatt 4954050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 41866176 - 41866256
Alignment:
Q  47 atccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||| | ||||| ||||||||||||| ||||||||||||||    
T  41866176 atccaaacataaatcaattcacatccaactcacttttaactaaactcaattccctcaaactcaattttatcaaaatcaatt 41866256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 38306010 - 38306113
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||  || |  |||||||||||||||||||||| ||||||||||| ||||||| ||||| ||||||  |||| |||||||| ||||||||    
T  38306010 aagaatcacttttgctttaaggtatccaaacataaatcaattcgcattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatc 38306109  T
Q  124 aatt 127  Q
    ||||    
T  38306110 aatt 38306113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 54488604 - 54488707
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||  || |  |||| ||||||||||||||||||||||||||||| ||||||| ||||| ||||||  |||| |||||||| ||||||||    
T  54488604 aagaatcacttttgctttaaggtattcaaacataaatcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatc 54488703  T
Q  124 aatt 127  Q
    ||||    
T  54488704 aatt 54488707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 15619633 - 15619703
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattct 114  Q
    |||||||||||||| |||||||||||| ||||||| |||| |||||||| |||||||||||||||||||||    
T  15619633 tgtatccaaacatacatcaattcacatccaactcactttttaccaaaatcaattctctcaaactcaattct 15619703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 31520454 - 31520353
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||||| |||  |||| ||||||||||| |||||||  ||||||| |||||||||||||||||||| |||||||  |||||| ||||||||||    
T  31520454 aatcacttttaat-aagcatatctaaacataaatccattcacacccaactcacttttaaccaaaattaattctttcaaacttcattctaccaaaatcaat 31520356  T
Q  127 tct 129  Q
    |||    
T  31520355 tct 31520353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 14054853 - 14054954
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    |||||||||||  ||||| |||||||||||||||||||||||||  |||||| |||| || ||| | |||||| |||||||||||| | |||||||||||    
T  14054853 aatcacttttatataagtttatccaaacataaatcaattcacatcaaactcacttttgactaaactcaattctttcaaactcaattatgtcaaaatcaat 14054952  T
Q  127 tc 128  Q
    ||    
T  14054953 tc 14054954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 48908294 - 48908375
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||||||  ||||||||||  |||||| ||||||||||||| ||||||||||||||||||  ||| ||||||||||    
T  48908294 gtatccaaacataac-caattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaataatattaaaatcaatt 48908375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 39993574 - 39993642
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattct 114  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||| |||||| | ||| ||||||||    
T  39993574 tatctaaacataaatcaattcacatttaactcatttttaatcaaaatcaattctatgaaaatcaattct 39993642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 45780095 - 45779992
Alignment:
Q  25 agaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatca 124  Q
    |||||||||||||| | | |||||| ||||| |||| |||||| |   |||||| |||| |||||||| |||| ||||||||||||||||||| ||||||    
T  45780095 agaatcacttttaagtgaatgtatctaaacaaaaattaattcataccaaactcactttttaccaaaatcaatt-tctcaaactcaattctatcgaaatca 45779997  T
Q  125 attct 129  Q
    |||||    
T  45779996 attct 45779992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 54487287 - 54487219
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    |||||||||||||||||||||| |||||||||||| |||| | | |||| |||||| ||||||||||||    
T  54487287 tgtatccaaacataaatcaatttacattcaactcacttttgatcgaaatcaattctatcaaactcaatt 54487219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 523165 - 523252
Alignment:
Q  40 taagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||| ||||||||||||||||||||| ||| |||||| ||||  ||||||| |||| | |||| |||||||  |||||||||||||    
T  523165 taagtgaatccaaacataaatcaattcatattgaactcactttttcccaaaatcaattttgtcaagctcaattaaatcaaaatcaatt 523252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 56241922 - 56241844
Alignment:
Q  24 aagaatcactttta-attaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctc 102  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| ||  |||||| |||||| |||||| |||||||||    
T  56241922 aagaatcacttttacattaa-tgtatccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaattctctc 56241844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 53531979 - 53532081
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||| ||   |||| ||||||||||| ||  | |||| ||||||| ||||||| ||||| |||| | |||||||||||| |||||||||||||    
T  53531979 aatcacttttacttgcatgtagccaaacataaaccacgttacatccaactcacttttaactaaaatcaattatgtcaaactcaattttatcaaaatcaat 53532078  T
Q  127 tct 129  Q
    |||    
T  53532079 tct 53532081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 53914918 - 53914987
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattct 114  Q
    |||||||||||||||||||||| |||||||||||| |||||  ||||||  ||||||| ||||||||||||    
T  53914918 tgtatccaaacataaatcaatt-acattcaactcacttttagtcaaaatcgattctctgaaactcaattct 53914987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 16492946 - 16493014
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    ||||||||||||||||| ||||||||||||||||| |||||| |||| | |||| | ||||| ||||||    
T  16492946 tgtatccaaacataaataaattcacattcaactcacttttaatcaaactcaattatttcaaaatcaatt 16493014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 36150625 - 36150693
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattct 114  Q
    ||||||||||||||||| || |||||||||||| |||||| |||||| |||| | ||||| ||||||||    
T  36150625 tatccaaacataaatcactttacattcaactcacttttaatcaaaatcaattatatcaaaatcaattct 36150693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 22699762 - 22699829
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    |||||||||||||||||| || |||||||||| | ||||||||||||| ||||||  |||| ||||||    
T  22699762 gtatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattctaccaaaatcaatt 22699829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 22980768 - 22980701
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    |||||||||||||||||| || |||||||||| | ||||||||||||| ||||||  |||| ||||||    
T  22980768 gtatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattctaccaaaatcaatt 22980701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 22994355 - 22994288
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    |||||||||||||||||| || |||||||||| | ||||||||||||| ||||||  |||| ||||||    
T  22994355 gtatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattctaccaaaatcaatt 22994288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 38694037 - 38694152
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattc 113  Q
    ||||||| | |||||||||||||||   ||||||||||||||||||  ||||  || |||||| | |||||  |||||| |||||| | |||||||||      
T  38694037 atcaacccataagaatcacttttaagcgagtgtatccaaacataaactaatttgcactcaacttacttttagacaaaatcaattcttttaaactcaatca 38694136  T
Q  114 tatcaaaatcaattct 129  Q
    ||||||||| ||||||    
T  38694137 tatcaaaattaattct 38694152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 2175231 - 2175161
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaatt 97  Q
    ||||||||||||   |||| ||||||||||||||||||||||||  |||||| |||||| |||||| ||||    
T  2175231 aatcacttttaagcgagtgcatccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaatt 2175161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 4649957 - 4649911
Alignment:
Q  83 taaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  4649957 taaccaaaatcaattcactcaaactcaattttatcaaaatcaattct 4649911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 48556585 - 48556655
Alignment:
Q  58 aatcaattcacattcaactca-tttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||||||||| ||| |||||  | ||||| |||| | |||||||||||||||||||||||||||    
T  48556585 aatcaattcacattcaagtcactttttttcaaaaatcaattttatcaaactcaattctatcaaaatcaatt 48556655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 38740374 - 38740286
Alignment:
Q  39 ttaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattc 128  Q
    |||| ||||||||||||||||||| ||||  ||||||||| ||||| ||||||| |||| |  |||| |||||||  |||||||||||||    
T  38740374 ttaattgtatccaaacataaatcacttcaacttcaactcacttttatccaaaatcaatt-ttacaaaatcaattcattcaaaatcaattc 38740286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 8683115 - 8683012
Alignment:
Q  26 gaatcacttttaattaagtgtatccaaacataaatcaattc--acattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||  | | ||||||||||||||||| |||||  ||||| |||||| ||||||||||| | |||| ||||||| | |||| | ||| ||||    
T  8683115 gaatcacttttatgttaatgtatccaaacataaattaattcttacattaaactcaattttaaccaaattcaattttctcaaaattaattatttcacaatc 8683016  T
Q  124 aatt 127  Q
    ||||    
T  8683015 aatt 8683012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 47384987 - 47385027
Alignment:
Q  51 aaacataaatcaattcacattcaactcatttttaaccaaaa 91  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  47384987 aaacataaatcaattcacatttaactcatttttaatcaaaa 47385027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 22694656 - 22694578
Alignment:
Q  52 aacataaatcaattcacattcaactcatttttaaccaaaattaattct-ctcaaactcaattctatcaaaatcaattctt 130  Q
    ||||||||||| || |  ||||||||| ||||||||||||| |||||| || ||| ||||||||| ||||||||||||||    
T  22694656 aacataaatcactttatgttcaactcacttttaaccaaaatcaattctacttaaa-tcaattctaccaaaatcaattctt 22694578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 46958047 - 46958110
Alignment:
Q  49 ccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    |||||||||||| | || || ||||||||| ||||||||||||| |||||| ||||| ||||||    
T  46958047 ccaaacataaattactttacgttcaactcacttttaaccaaaatcaattctatcaaaatcaatt 46958110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 130
Target Start/End: Complemental strand, 28947811 - 28947730
Alignment:
Q  49 ccaaacataaatcaattcacattcaactcatttttaaccaaaattaatt-ctctcaaactcaattctatcaaaatcaattctt 130  Q
    |||||||||||||| || || ||||||||| ||||||||||||| |||| | || ||| ||||||| | ||||||||||||||    
T  28947811 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattccacttaaa-tcaattccaccaaaatcaattctt 28947730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 40286302 - 40286383
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||||| ||  || |||||||| |||||| |||||| |||||| | | | ||| |||||||||||||||||    
T  40286302 gtatccaaacataaatcatttttcactcaactcaattttaatcaaaatcaattctat-agaatcagttctatcaaaatcaatt 40286383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 40335636 - 40335706
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattcta 115  Q
    |||| ||||||||||||| || | ||| || ||| |||||||||||||||||| | ||||| |||||||||    
T  40335636 gtatacaaacataaatcactttaaatttaattcacttttaaccaaaattaattttatcaaaatcaattcta 40335706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 1616515 - 1616563
Alignment:
Q  80 ttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||||| ||||||  |||| |||||||||||||||||||||||    
T  1616515 ttttaaccaaaatcaattcta-caaaatcaattctatcaaaatcaattct 1616563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 8754177 - 8754217
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaa 85  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  8754177 tgtatccaaacataaatcaatt-acattcaactcacttttaa 8754217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 13788201 - 13788144
Alignment:
Q  40 taagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaatt 97  Q
    ||||||| |||||||||||||||||  ||||| |||| | |||||| |||||||||||    
T  13788201 taagtgtttccaaacataaatcaatatacatttaacttaattttaatcaaaattaatt 13788144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 14597689 - 14597609
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||||||||| ||  ||||||||||| |||||| |||||||| || | | ||| ||||||| | |||||||||||    
T  14597689 tatccaaacataaatcacttttcattcaactcacttttaatcaaaattagttatgt-aaaatcaattcaaccaaaatcaatt 14597609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 26824305 - 26824224
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaa 105  Q
    ||||||||||| ||  |||  ||||| ||| ||||||||||| ||| |||| | ||||||||||||||| |||||| |||||    
T  26824305 aagaatcacttctacataaaagtatctaaatataaatcaatttacactcaatttatttttaaccaaaatcaattctatcaaa 26824224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 16202572 - 16202532
Alignment:
Q  89 aaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||| |||||||||||| |||||| ||||||||||||||||    
T  16202572 aaatcaattctctcaaaatcaattttatcaaaatcaattct 16202532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 39438880 - 39438948
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    ||||| ||||||||||  | ||||||||||||||| ||||||  |||||||||||  ||||| ||||||    
T  39438880 tgtatacaaacataaacaacttcacattcaactcacttttaagtaaaattaattcattcaaaatcaatt 39438948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 1945134 - 1945007
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattc 113  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  1945134 atcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattc 1945035  T
Q  114 tatcaaaatcaattcttcctgccgccat 141  Q
    |||||||||||||||| || ||||||||    
T  1945034 tatcaaaatcaattctccccgccgccat 1945007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 2213516 - 2213634
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    ||||||||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| | |||||| |||||||||||||||||    
T  2213516 aatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaa 2213615  T
Q  111 ttctatcaaaatcaattct 129  Q
    |||||||||||||||||||    
T  2213616 ttctatcaaaatcaattct 2213634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 9988584 - 9988481
Alignment:
Q  26 gaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaa 125  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  9988584 gaatcacttttaaataagtgtatccaaacataaatcaattcacatccaactcacttttaacaaaaatcaattctctcaaactcaattctatcaaaatcaa 9988485  T
Q  126 ttct 129  Q
    ||||    
T  9988484 ttct 9988481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 28127385 - 28127267
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    ||||||||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| | |||||| |||||||||||||| ||    
T  28127385 aatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactaaa 28127286  T
Q  111 ttctatcaaaatcaattct 129  Q
    |||||||||||||||||||    
T  28127285 ttctatcaaaatcaattct 28127267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 5916324 - 5916210
Alignment:
Q  26 gaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaa 125  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||| | |||||||||||||||||    
T  5916324 gaatcacttttaataaagtgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaaattaattctatcaaaatcaa 5916226  T
Q  126 ttcttcctgccgccat 141  Q
    |||| || ||||||||    
T  5916225 ttctccccgccgccat 5916210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 36312302 - 36312416
Alignment:
Q  26 gaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaa 125  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||| | |||||||||||||||||    
T  36312302 gaatcacttttaataaagtgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaaattaattctatcaaaatcaa 36312400  T
Q  126 ttcttcctgccgccat 141  Q
    |||| || ||||||||    
T  36312401 ttctccccgccgccat 36312416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 2213670 - 2213775
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| |||||||||||||| | ||||||||||||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  2213670 aagaatcacttttaaataagtgtatccaaagacaaatcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 2213769  T
Q  124 aattct 129  Q
    ||||||    
T  2213770 aattct 2213775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 7472758 - 7472654
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  7472758 aagaatcacttttaaataagtgtatccaaacataa-tcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 7472660  T
Q  124 aattct 129  Q
    ||||||    
T  7472659 aattct 7472654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 30007618 - 30007533
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30007618 tgtaaccaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 30007533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 34433392 - 34433286
Alignment:
Q  24 aagaatcacttttaa-ttaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaat 122  Q
    ||||||||||||| | || | ||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| ||||||||||||||||||||||    
T  34433392 aagaatcactttttactttattgtatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaat 34433293  T
Q  123 caattct 129  Q
    |||||||    
T  34433292 caattct 34433286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 7296181 - 7296281
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    |||||||||||  | |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  7296181 aatcacttttatatgagtgtatccaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattctctcaaactcaattatatcaaagtcaat 7296280  T
Q  127 t 127  Q
    |    
T  7296281 t 7296281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 26208014 - 26207911
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||| ||||| | ||||||||||||  |||||||||||| | |||||||||||||||    
T  26208014 aagaatcaattttaattaagtgtatcaaaacataaatcaattcacatccaactgacttttaaccaaaaccaattctctcaaaattaattctatcaaaatc 26207915  T
Q  124 aatt 127  Q
    ||||    
T  26207914 aatt 26207911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 31224703 - 31224806
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||| | || | ||||||||||||||||||||||||| ||||||| ||||||| ||||| |||||| |||||||||||||||||||||||    
T  31224703 aagaatcacttttagtaaaatatatccaaacataaatcaattcacatccaactcacttttaactaaaatcaattctttcaaactcaattctatcaaaatc 31224802  T
Q  124 aatt 127  Q
    ||||    
T  31224803 aatt 31224806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 45714735 - 45714648
Alignment:
Q  42 agtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||||||||||||||||  ||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  45714735 agtgtatccaaacataaatcaattcacatcgaactcatttttaatcaaaatcaattctctcaaactcaattatatcaaaatcaattct 45714648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 44619143 - 44619041
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||| ||||||  |||||||||||||||||||||||||| | |  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  44619143 aatcatttttaaacaagtgtatccaaacataaatcaattcccctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaat 44619044  T
Q  127 tct 129  Q
    |||    
T  44619043 tct 44619041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 2215292 - 2215380
Alignment:
Q  41 aagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||||||||||||||| |  |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  2215292 aagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctctcaagctcaattctatcaaaatcaattct 2215380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 42089617 - 42089510
Alignment:
Q  24 aagaatcacttttaattaagtgtatc----caaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaa 119  Q
    ||||||||||||||| ||||||||||    ||||||||||||||||||||||||||||| |||||| |||||| ||||||||  |||| |||||||||||    
T  42089617 aagaatcacttttaaataagtgtatctatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctcttgaacttaattctatcaa 42089518  T
Q  120 aatcaatt 127  Q
    ||||||||    
T  42089517 aatcaatt 42089510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 39141554 - 39141450
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||| |||||| | ||||||||||||||||| |||||||| || ||||||| ||||||||||||| |||||| |||||||||||| ||||||||||    
T  39141554 aagaatcatttttaaatgagtgtatccaaacataa-tcaattcatatccaactcacttttaaccaaaatcaattctttcaaactcaattatatcaaaatc 39141456  T
Q  124 aattct 129  Q
    ||||||    
T  39141455 aattct 39141450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 32502016 - 32502111
Alignment:
Q  31 acttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||| | ||||||||||||||| ||||||||| |  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32502016 acttttaattgaatgtatccaaacataa-tcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 32502111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 14821186 - 14821288
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| || | |||||||||||||||||| |||||||||||| |||||| ||||||| ||||| ||||| |||||||||||||||||||||||     
T  14821186 aagaatcacttctagtaaagtgtatccaaacataa-tcaattcacattaaactcacttttaactaaaatcaattcactcaaactcaattctatcaaaatt 14821284  T
Q  124 aatt 127  Q
    ||||    
T  14821285 aatt 14821288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 25747946 - 25747864
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||| ||||||||||||||||||||||||||| ||||||    
T  25747946 tgtatccaaacataaatcaatt-acattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaactcaatt 25747864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 8170355 - 8170440
Alignment:
Q  43 gtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||| |||||| |||||||||||| |||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  8170355 gtgtatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaattaattct 8170440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 36548243 - 36548325
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||||||||||||||||||   ||||| |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  36548243 gtatccaaacataaatcaattcacatcagactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaatt 36548325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 7295428 - 7295330
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    |||||||||||  || ||||||||||||||||||||||| || |  |||||||||||||||| ||| ||||||||||||||||||||||||||||| |||    
T  7295428 aatcactttta--tatgtgtatccaaacataaatcaatttacgtcaaactcatttttaaccagaatcaattctctcaaactcaattctatcaaaattaat 7295331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 41580776 - 41580691
Alignment:
Q  43 gtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattc 128  Q
    |||||||||||||||||| |||| ||||  |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  41580776 gtgtatccaaacataaattaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaattcgatcaaaatcaattc 41580691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 3853943 - 3854028
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||| |||||| ||||| ||||||| |||||| ||||||||    
T  3853943 tgtatccaaacataaatcaatttacattcaactcacttttaatcaaaatcaattctatcaaaatcaattccatcaaactcaattct 3854028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 28261317 - 28261422
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| ||  | || ||||||||| |||||||||||||||| ||||||| |||||| |||||| ||||||||||||||||||| ||| |||||     
T  28261317 aagaatcacttctatgtgagagtatccaaatataaatcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattgtattaaaatt 28261416  T
Q  124 aattct 129  Q
    ||||||    
T  28261417 aattct 28261422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 38600511 - 38600424
Alignment:
Q  41 aagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattc 128  Q
    |||||||| |||||||||||||||| ||||  |||||| ||||||||||||| |||||||||||||| ||||| |||||||| |||||    
T  38600511 aagtgtattcaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaacttaattcgatcaaaattaattc 38600424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 18511145 - 18511230
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||||||||| ||||| || ||| ||||||||||||| |||| | ||||| |||||| ||||||||||||||||    
T  18511145 tgtatccaaacataaatcaattaacatttaaatcacttttaaccaaaatcaattatatcaaaatcaattttatcaaaatcaattct 18511230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 8041311 - 8041397
Alignment:
Q  33 ttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaa 120  Q
    |||||| ||| || ||||||||||||||||||| |||||||| ||| |||||  |||||| |||||||||||||||||||||||||||    
T  8041311 ttttaagtaattgcatccaaacataaatcaatt-acattcaattcacttttattcaaaatcaattctctcaaactcaattctatcaaa 8041397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 16467131 - 16467214
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||||||| ||||  |||||| ||||||||||||| |||| |  |||| |||||||||||||||||||||||    
T  16467131 tatccaaacataaatcaatttacatctaactcacttttaaccaaaatcaattatgccaaaatcaattctatcaaaatcaattct 16467214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 42516060 - 42515958
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||| |||| | | ||| ||| ||||||||| |||||||||||  |||||| ||||||| ||||| ||||||||||||||||||| ||||||||||    
T  42516060 aagaatcattttttaatgagtatattcaaacataa-tcaattcacatcaaactcacttttaactaaaatcaattctctcaaactcaattatatcaaaatc 42515962  T
Q  124 aatt 127  Q
    ||||    
T  42515961 aatt 42515958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 31562769 - 31562667
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||||   |||||  |||||||||| ||||||||| |  || ||| ||||||||||||| ||||||||||||||||||| ||||||||||    
T  31562769 aagaatcacttttaaacgagtgt--ccaaacataa-tcaattcacctcaaattcacttttaaccaaaatcaattctctcaaactcaattttatcaaaatc 31562673  T
Q  124 aattct 129  Q
    ||||||    
T  31562672 aattct 31562667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 27911432 - 27911517
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    |||||||||||| | ||| |||||||||||||||||||||||||  |||||| ||||||||||| | |||||| ||||| ||||||    
T  27911432 aatcacttttaaatgagtatatccaaacataaatcaattcacatcaaactcacttttaaccaaactcaattctatcaaaatcaatt 27911517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 34997295 - 34997218
Alignment:
Q  50 caaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||| |||| | ||||||| |||| ||||||||||||||    
T  34997295 caaacataaatcaattcacatccaattcatttttaacaaaaatcaattttgtcaaactaaattttatcaaaatcaatt 34997218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 12110918 - 12110999
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||||| || | |||||||||| ||||||||||||| |||| |  |||| |||||||||||||||||||||    
T  12110918 gtatccaaacataaatcactttatattcaactcacttttaaccaaaatcaatt-tgacaaaatcaattctatcaaaatcaatt 12110999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 23358284 - 23358385
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||||  |||||||||||||||||||  | ||||  |  |||||| |||||| |||||| |||||||||||||||||||||||  ||||||||    
T  23358284 aatcacttttaaacaagtgtatccaaacataaactatttcatctcaaactcacttttaatcaaaatcaattctctcaaactcaattctat-taaatcaat 23358382  T
Q  127 tct 129  Q
    |||    
T  23358383 tct 23358385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 28641690 - 28641768
Alignment:
Q  49 ccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||| |||||||||||||||| |||||||  |||||||||||| |||||||||| | ||||||| || ||||||||||    
T  28641690 ccaaatataaatcaattcacatccaactcacatttaaccaaaatcaattctctcagaatcaattcaattaaaatcaatt 28641768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 23377548 - 23377600
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaatt 97  Q
    ||||||||||||||||||| | |||||||||||| ||||||||||||||||||    
T  23377548 gtatccaaacataaatcaacttacattcaactcacttttaaccaaaattaatt 23377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 23267400 - 23267345
Alignment:
Q  73 aactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattc 128  Q
    |||||| || |||||||||| ||||| |||||||||||||||||||||||||||||    
T  23267400 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattc 23267345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 23359994 - 23359927
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    |||||||||||||||||| || |||||||||||| ||||||||||||| ||||||  |||| ||||||    
T  23359994 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattctaccaaaatcaatt 23359927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 1763264 - 1763347
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||| |||||||||||| || | |||||||||| ||||||||||||| |||| |  |||| |||||| ||||||||||||||||    
T  1763264 gtatctaaacataaatcactttaaattcaactcaattttaaccaaaatcaatt-ttacaaaatcaattttatcaaaatcaattct 1763347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 30599968 - 30599908
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaa 105  Q
    ||||||||||| ||||||||| ||| |||||||| ||||||||||||| |||||| |||||    
T  30599968 gtatccaaacacaaatcaattgacactcaactcacttttaaccaaaatcaattctatcaaa 30599908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 10918649 - 10918700
Alignment:
Q  47 atccaaacataaatcaattcacattcaactcatttttaaccaaaattaattc 98  Q
    |||||||||||||||| || |||||||||||| ||||| ||||||| |||||    
T  10918649 atccaaacataaatcactttacattcaactcacttttatccaaaatcaattc 10918700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 77
Target Start/End: Original strand, 11240714 - 11240747
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactc 77  Q
    ||||| ||||||||||||||||||||||||||||    
T  11240714 tgtattcaaacataaatcaattcacattcaactc 11240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 3602541 - 3602442
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||| || | | ||||||||||||| |||||| |  ||||||||| |||||  |||||| |||||| ||||| |||||||  | |||||||||    
T  3602541 aatcacttttattttaatatatccaaacataattcaatt-aagttcaactcacttttagacaaaatcaattctatcaaaatcaattcagtaaaaatcaat 3602443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 43858274 - 43858194
Alignment:
Q  47 atccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||||||     |||||||| ||||  ||||||| |||||  | ||| |||||||||||||||||||||    
T  43858274 atccaaacataaatcaattattcatcaactcacttttgcccaaaatcaattcaattaaaatcaattctatcaaaatcaatt 43858194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 1199863 - 1199970
Alignment:
Q  22 acaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaa 121  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1199863 acaagaatcacttctaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaa 1199962  T
Q  122 tcaattct 129  Q
    ||||||||    
T  1199963 tcaattct 1199970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 20800375 - 20800248
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattc 113  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||    
T  20800375 atcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattc 20800276  T
Q  114 tatcaaaatcaattcttcctgccgccat 141  Q
    |||||||||||||||| || ||||||||    
T  20800275 tatcaaaatcaattctccccgccgccat 20800248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 35569300 - 35569173
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattc 113  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||    
T  35569300 atcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattc 35569201  T
Q  114 tatcaaaatcaattcttcctgccgccat 141  Q
    |||||||||||||||| || ||||||||    
T  35569200 tatcaaaatcaattctccccgccgccat 35569173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 48510946 - 48511051
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||| |||||||||    
T  48510946 aagaatcacttttaagcaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattatctcaaactcaattcaatcaaaatc 48511045  T
Q  124 aattct 129  Q
    ||||||    
T  48511046 aattct 48511051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 31223412 - 31223517
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| || | |||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||||||    
T  31223412 aagaatcacttctattaaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctattaaaatc 31223511  T
Q  124 aattct 129  Q
    ||||||    
T  31223512 aattct 31223517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 42850307 - 42850202
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||||  |||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||| || |||||||||||||||||||||    
T  42850307 aagaatcacttttaaggaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatc 42850208  T
Q  124 aattct 129  Q
    ||||||    
T  42850207 aattct 42850202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 43728965 - 43728861
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||||| ||||||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  43728965 aagaatcacttttaaataagtttatccaaacataa-tcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattctatcaaaatc 43728867  T
Q  124 aattct 129  Q
    ||||||    
T  43728866 aattct 43728861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 25230035 - 25230149
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattc 113  Q
    |||||| || ||||||||||| || | |||||||||||||||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||||| |||    
T  25230035 atcaactaataagaatcacttctattaaagtgtatccaaacataa-tcaattcacattcaactcacttttaactaaaatcaattctctcaaactcagttc 25230133  T
Q  114 tatcaaaatcaattct 129  Q
    ||||||||||||||||    
T  25230134 tatcaaaatcaattct 25230149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 47123424 - 47123527
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||  |||||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  47123424 aagaatcacttttaacgaagtgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatc 47123523  T
Q  124 aatt 127  Q
    ||||    
T  47123524 aatt 47123527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 15884285 - 15884370
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| |||||||||| ||||||||||||||||||    
T  15884285 tgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctgtcaaactcaactctatcaaaatcaattct 15884370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 49243050 - 49242965
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||    
T  49243050 tgtattcaaacataaatcaattcacatccaactcatttttaaccaaaatcaattctctcaaactcaattatatcaaaattaattct 49242965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 13056039 - 13056138
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||||| ||| |||| |||||||||||||||||||| |||||||| ||||||||||||| |||||| |||||||| |||||||||||||||||    
T  13056039 aatcacttttaat-aagcgtattcaaacataaatcaattcacactcaactcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaat 13056137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 7826442 - 7826339
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | || ||| ||||||||||||||||||||||  | |||| ||||||||||||| |||||||||||| |||||||||||||||||    
T  7826442 aagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaagctcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatc 7826343  T
Q  124 aatt 127  Q
    ||||    
T  7826342 aatt 7826339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 10470647 - 10470732
Alignment:
Q  43 gtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||| |||||| |||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  10470647 gtgtatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattct 10470732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 12468253 - 12468366
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||||  ||||||||||||| ||||||||||| ||||  |||||| ||||||||||||| |||| | ||||||||||||||||| ||||||||    
T  12468253 aatcacttttaaaaaagtgtatccaaatataaatcaatttacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatc-aaatcaat 12468351  T
Q  127 tcttcctgccgccat 141  Q
    |||||| ||||||||    
T  12468352 tcttcccgccgccat 12468366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 6166148 - 6166252
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | ||||||||||||||||| |||||||| ||  |||||| || |||||||||| |||||||||||| |||||||||||||||||    
T  6166148 aagaatcacttttaaatgagtgtatccaaacataa-tcaattcagatcaaactcacttctaaccaaaatcaattctctcaaattcaattctatcaaaatc 6166246  T
Q  124 aattct 129  Q
    ||||||    
T  6166247 aattct 6166252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 127
Target Start/End: Complemental strand, 11023410 - 11023315
Alignment:
Q  31 acttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||| | ||||||||||||||| ||||||||| |  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11023410 acttttaattgaatgtatccaaacataa-tcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 11023315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 34718489 - 34718592
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||    |||||||| |||||||||||||||| | ||  |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  34718489 aagaatcacttttgtacaagtgtattcaaacataaatcaatttatatcaaactcacttttaaccaaaattaattatctcaaactcaattctatcaaaatc 34718588  T
Q  124 aatt 127  Q
    ||||    
T  34718589 aatt 34718592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 45710087 - 45710189
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| || | |||||||| ||||||||| ||||||||||| ||||||| |||||| |||||| ||||| ||||||||||||||||||||||||    
T  45710087 aagaatcacttctagtaaagtgtattcaaacataa-tcaattcacatacaactcacttttaatcaaaatcaattcactcaaactcaattctatcaaaatc 45710185  T
Q  124 aatt 127  Q
    ||||    
T  45710186 aatt 45710189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 5410678 - 5410782
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| || |||||| |||||||||||||||| |||| ||||||| |||||| |||||| |||||| ||||| |||||| ||||||||||    
T  5410678 aagaatcacttttaagta-gtgtattcaaacataaatcaatttacatccaactcacttttaatcaaaatcaattctttcaaattcaattatatcaaaatc 5410776  T
Q  124 aattct 129  Q
    ||||||    
T  5410777 aattct 5410782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 11561860 - 11561948
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    |||||||||||||||   ||| ||| |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  11561860 aagaatcacttttaaaatagtatattcaaatataaatcaattcacattcaactcacttttaaccaaaattaattctttcaaactcaatt 11561948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 27801738 - 27801635
Alignment:
Q  26 gaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaa 125  Q
    |||| |||||||| | |||| ||||||||||||||||||| ||||  |||||| |||||| |||||| |||||||| ||| |||||||||||||||||||    
T  27801738 gaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaa 27801639  T
Q  126 ttct 129  Q
    ||||    
T  27801638 ttct 27801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 50977424 - 50977323
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    |||||||| |||| ||| ||||||||||||||| |||||||||   |||||| ||||||||||||| |||||| |||||||| |||||||||||||||||    
T  50977424 aatcacttgtaat-aagcgtatccaaacataaaacaattcacaccaaactcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaat 50977326  T
Q  127 tct 129  Q
    |||    
T  50977325 tct 50977323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 6464646 - 6464750
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| || | ||||||||  |||||||| |||||||||||| |||||| ||||||||||||| || || ||||||||||||| ||||||||||    
T  6464646 aagaatcacttctagtaaagtgtataaaaacataa-tcaattcacattaaactcacttttaaccaaaatgaactcactcaaactcaattatatcaaaatc 6464744  T
Q  124 aattct 129  Q
    ||||||    
T  6464745 aattct 6464750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 50406168 - 50406273
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||| ||||||  ||||| ||||||||| ||||||||||||||  |||||| |||||| |||||| || ||| |||||||||||| ||||||||||    
T  50406168 aagaatcatttttaacgaagtgcatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaaatctttcaaactcaattttatcaaaatc 50406267  T
Q  124 aattct 129  Q
    ||||||    
T  50406268 aattct 50406273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 4369890 - 4369803
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    ||||||||||||||| | || ||| ||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||| ||||||    
T  4369890 aagaatcacttttaagtgagggtacccaaacataaatcaattcaca-tcaactcacttttaaccaaaatcaattctctcaaaatcaatt 4369803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 12247461 - 12247560
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||||  |||||||||||||||||| | |||| |||| ||||||| ||||||||| ||| |||||||| |||||||||||||| |||||||||    
T  12247461 aatcacttttaaacaagtgtatccaaacataatt-aatttacatccaactcacttttaaccagaatcaattctcttaaactcaattctattaaaatcaat 12247559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 26058281 - 26058384
Alignment:
Q  26 gaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaa 125  Q
    |||| |||||||| | |||| ||||||||||||||||||| ||||  || ||| |||||| |||||| |||||||| ||| |||||||||||||||||||    
T  26058281 gaattacttttaaatgagtgcatccaaacataaatcaatttacatctaattcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaa 26058380  T
Q  126 ttct 129  Q
    ||||    
T  26058381 ttct 26058384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 40229558 - 40229455
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||| | |||  |||||||||||||||||||||||||||| |  |||||| ||||||||||||| |||||   |||| |||||||||||||||||    
T  40229558 aagaatcacctgtaagaaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattccaacaaaatcaattctatcaaaatc 40229459  T
Q  124 aatt 127  Q
    ||||    
T  40229458 aatt 40229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 40352451 - 40352533
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||||||||| || ||||| |||||| ||||||||||||| ||||| | |||| |||||||||||||||||||||||    
T  40352451 tatccaaacataaatcactttacattaaactcacttttaaccaaaatcaattc-cacaaaatcaattctatcaaaatcaattct 40352533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 4347033 - 4347114
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||||| || |||||||||||| ||||||||||||| ||||||  |||| ||||||||| |||||||||||    
T  4347033 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct-acaaaatcaattctaccaaaatcaatt 4347114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 36205229 - 36205334
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| ||||| ||||||| || ||| ||||||| ||  ||| || |||||| |||||| ||||||||||||||||||||  | ||||||    
T  36205229 aagaatcacttttaaataagtttatccaatcaaaaaccaattcatatctaacccacttttaatcaaaatcaattctctcaaactcaattccgttaaaatc 36205328  T
Q  124 aattct 129  Q
    ||||||    
T  36205329 aattct 36205334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 35536110 - 35536212
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||||   |||||||| ||||||||  |||||||| |  || ||| |||||| |||||||||||||||||||||||||||||| |||||     
T  35536110 aagaatcacttttaaacgagtgtatctaaacataac-caattcacgtcaaagtcacttttaatcaaaattaattctctcaaactcaattctattaaaatt 35536208  T
Q  124 aatt 127  Q
    ||||    
T  35536209 aatt 35536212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 13931661 - 13931762
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||  ||||| | ||| ||||||||||||| |||||||||||  ||||||||||||| |||||| |||| |   |||||||||||||||||||||    
T  13931661 aagaatcatgtttaagtgagtatatccaaacataa-tcaattcacatcaaactcatttttaaacaaaatcaatttttggaaactcaattctatcaaaatc 13931759  T
Q  124 aat 126  Q
    |||    
T  13931760 aat 13931762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 43134532 - 43134593
Alignment:
Q  68 cattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||| ||||||    
T  43134532 cattcaactcacttttaaccaaaatcaattctcttaaactcaattctatccaaataaattct 43134593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 23628773 - 23628706
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    |||||||||||||||||||||| |||||||||||| |||||  |||||| |||| ||||||||||||||    
T  23628773 tgtatccaaacataaatcaatt-acattcaactcacttttagtcaaaatcaattatctcaaactcaatt 23628706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 25061264 - 25061367
Alignment:
Q  24 aagaatcacttttaa-ttaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaat 122  Q
    ||||||||||||||  ||||| ||||||||||||||||||||| |  ||||||||| ||||||||||||| |||||   |||| |||||| || ||||||    
T  25061264 aagaatcacttttatgttaag-gtatccaaacataaatcaatttatgttcaactcacttttaaccaaaatcaattcaaccaaaatcaattttaacaaaat 25061362  T
Q  123 caatt 127  Q
    |||||    
T  25061363 caatt 25061367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 29441271 - 29441327
Alignment:
Q  73 aactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||| || |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  29441271 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 29441327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 47981862 - 47981779
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||||| || | |||||||||| |||||||||||||||||| |  |||| |||||| ||| ||||||||||||    
T  47981862 gtatccaaacataaatcactttaaattcaactcaattttaaccaaaattaatt-ttacaaaatcaattttattaaaatcaattct 47981779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 47085898 - 47085961
Alignment:
Q  51 aaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattct 114  Q
    |||||||||||||||||||||||||||| ||||||  ||||| |||||| ||||| ||||||||    
T  47085898 aaacataaatcaattcacattcaactcacttttaattaaaatcaattctatcaaaatcaattct 47085961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 13344836 - 13344913
Alignment:
Q  49 ccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||| || || ||||||||| ||||||||||||| ||||||  |||| ||||||| |||||||||||||    
T  13344836 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattct-acaaaatcaattcaatcaaaatcaatt 13344913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 41989 - 42066
Alignment:
Q  50 caaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||||||||||| |||||||||  ||| || ||||| ||||||  |||| |||||| ||||||||||||||    
T  41989 caaacataaatcaattcacgttcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 40821853 - 40821922
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcattttta 84  Q
    |||||| || ||||||||||| |  | |||||||||| ||||||| |||||||||||||||||||||||||    
T  40821853 atcaacaaataagaatcacttatgttaaagtgtatcctaacataa-tcaattcacattcaactcattttta 40821922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 291802 - 291729
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctc 100  Q
    ||||||||||||  ||||||||||||||||||| |||||||  |  |||||| |||||| |||||| |||||||    
T  291802 aatcacttttaaacaagtgtatccaaacataaaccaattcatctcaaactcacttttaatcaaaatcaattctc 291729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 9447571 - 9447674
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | ||| |||| |||||||| || ||||||||  |||||| |||||||||||   | |||||||||| |||||| ||| ||||||    
T  9447571 aagaatcacttttaaatgagtatatctaaacataa-tccattcacatcaaactcacttttaaccaaacc-atttctctcaaattcaattttattaaaatc 9447668  T
Q  124 aattct 129  Q
    ||||||    
T  9447669 aattct 9447674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 29759710 - 29759762
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaatt 97  Q
    |||||||||||||||||| || |||||||||||| ||||||||| ||| ||||    
T  29759710 gtatccaaacataaatcattttacattcaactcacttttaaccataatcaatt 29759762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 43730111 - 43730059
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaatt 97  Q
    ||||||||||| ||||||||| ||| |||||||| ||||||||||||| ||||    
T  43730111 gtatccaaacacaaatcaattgacactcaactcacttttaaccaaaatcaatt 43730059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 34661946 - 34661996
Alignment:
Q  69 attcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaa 120  Q
    ||||||||||||||||| |||| | ||||||||||||||||||| |||||||    
T  34661946 attcaactcatttttaatcaaa-tcaattctctcaaactcaattttatcaaa 34661996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 47978426 - 47978359
Alignment:
Q  47 atccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattct 114  Q
    |||||| ||||||||| || |||||||||||| ||||| ||||||| ||||| |||||| | ||||||    
T  47978426 atccaaccataaatcactttacattcaactcacttttacccaaaatcaattcactcaaaatgaattct 47978359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 43134454 - 43134495
Alignment:
Q  81 tttaaccaaaattaattctctcaaactcaattctatcaaaat 122  Q
    |||||||||||| |||| |||||||||||||||||| |||||    
T  43134454 tttaaccaaaatcaattatctcaaactcaattctattaaaat 43134495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 15576495 - 15576595
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||||||  ||  ||| ||||||||| ||||| | ||  |||||| ||||||  ||||| |||||||| ||||||||||  || |||||||||    
T  15576495 aatcacttttaattttgtaaatcaaaacataaaacaattaatatctaactcacttttaattaaaatcaattctcttaaactcaatttaattaaaatcaat 15576594  T
Q  127 t 127  Q
    |    
T  15576595 t 15576595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 6e-46; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 48459745 - 48459850
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  48459745 aagaatcacttttaagtaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 48459844  T
Q  124 aattct 129  Q
    ||||||    
T  48459845 aattct 48459850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 37639455 - 37639582
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattc 113  Q
    ||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  37639455 atcaacccacaagaatcacttttaataaagtttctccaaacataaatcaattcacattcaattcacttttaaccaaaatcaattctctcaaactcaattc 37639554  T
Q  114 tatcaaaatcaattcttcctgccgccat 141  Q
    |||||||||||||||| || ||||||||    
T  37639555 tatcaaaatcaattctccccgccgccat 37639582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 3622534 - 3622429
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  3622534 aagaatcacttttaagtaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 3622435  T
Q  124 aattct 129  Q
    ||||||    
T  3622434 aattct 3622429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 10372042 - 10371927
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattc 113  Q
    ||||||| ||||||||||||| |||| || |||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  10372042 atcaacccacaagaatcacttctaataaactgtaaccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattc 10371943  T
Q  114 tatcaaaatcaattct 129  Q
    ||||||||||||||||    
T  10371942 tatcaaaatcaattct 10371927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 38230093 - 38230208
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattc 113  Q
    ||||||| ||| |||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| |||||||    
T  38230093 atcaacccacatgaatcacttttaataaaatgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctcttaaattcaattc 38230192  T
Q  114 tatcaaaatcaattct 129  Q
    ||||||||||||||||    
T  38230193 tatcaaaatcaattct 38230208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 37562607 - 37562710
Alignment:
Q  26 gaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaa 125  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| |||||||| |||||||||||||||||||||||    
T  37562607 gaatcacttttaaataagtgtatccaaacataaatcaattcacatccaactcacttttaacaaaaatcaattctcttaaactcaattctatcaaaatcaa 37562706  T
Q  126 ttct 129  Q
    ||||    
T  37562707 ttct 37562710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 3375525 - 3375630
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | |||||||||||||| |||||||||||||   |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3375525 aagaatcacttttaagtgagtgtatccaaacacaaatcaattcacaccaaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatc 3375624  T
Q  124 aattct 129  Q
    ||||||    
T  3375625 aattct 3375630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 44967473 - 44967368
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| || | |||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||    
T  44967473 aagaatcacttctattaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatc 44967374  T
Q  124 aattct 129  Q
    ||||||    
T  44967373 aattct 44967368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 47021954 - 47022057
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||| | || | |||||||||||||||||||||||||||| ||||||| | ||||||||||||| ||||||||||||||||||||||||||||||    
T  47021954 aagaatcacatctagtaaagtgtatccaaacataaatcaattcactttcaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 47022053  T
Q  124 aatt 127  Q
    ||||    
T  47022054 aatt 47022057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 3342825 - 3342930
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| || | ||||||||||||||||||||||||||| || ||||||| ||||||| ||||| |||||||||||||||||||||||||||||     
T  3342825 aagaatcacttctattaaagtgtatccaaacataaatcaattcatatccaactcacttttaactaaaatcaattctctcaaactcaattctatcaaaatt 3342924  T
Q  124 aattct 129  Q
    ||||||    
T  3342925 aattct 3342930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 43631782 - 43631667
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    |||||||||  | ||||||||||||||||||||  ||||||||||||| |||||||| ||  |||||| ||||||||||||| |||||||||||||||||    
T  43631782 aatatcaactcaaaagaatcacttttaattaagcatatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattctctcaaactcaa 43631684  T
Q  111 ttctatcaaaatcaatt 127  Q
    |||||||||||||||||    
T  43631683 ttctatcaaaatcaatt 43631667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 3750738 - 3750826
Alignment:
Q  41 aagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| ||| |||||| |||||    
T  3750738 aagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattttattaaaatctattct 3750826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 47217612 - 47217512
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||||   |||| ||||||||||||||||||||||||  |||||| |||||| |||||| |||||||||||||||||||||||||||||||||    
T  47217612 aatcacttttaagcgagtgcatccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaat 47217513  T
Q  127 t 127  Q
    |    
T  47217512 t 47217512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 42740414 - 42740521
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    |||||||||  | ||||||||||||||| ||||| |||| ||||||||||||||| |||||||||| | ||||||||||||| |||||||||||||||||    
T  42740414 aatatcaacacataagaatcacttttaagtaagtatatctaaacataaatcaattaacattcaacttacttttaaccaaaatcaattctctcaaactcaa 42740513  T
Q  111 ttctatca 118  Q
    || |||||    
T  42740514 ttatatca 42740521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 42904588 - 42904686
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaat 122  Q
    |||||||||||||||   |||||||| ||||||||||||||||||||  |||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  42904588 aagaatcacttttaaacgagtgtatcaaaacataaatcaattcacatctaactcatttttatccaaaaacaattctctcaaactcaattctatcaaaat 42904686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 46541661 - 46541738
Alignment:
Q  50 caaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||| |||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||    
T  46541661 caaacataaaccaattcacattcaactcacttctaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 46541738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 386555 - 386452
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||   | ||| |||||||||||||||||||||||||||| || | ||||||||||||| ||| ||||||||||||||| ||||||||||    
T  386555 aagaatcacttttcggttagtatatccaaacataaatcaattcacattcagctaacttttaaccaaaatcaatactctcaaactcaattatatcaaaatc 386456  T
Q  124 aatt 127  Q
    ||||    
T  386455 aatt 386452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 9456140 - 9456244
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||||  |||||||||||||||||| |||||| || |  |||||| ||||||||||||| ||||||||| |||| |||||||||||||||    
T  9456140 aagaatcacttttaaacaagtgtatccaaacataa-tcaatttacctcaaactcacttttaaccaaaatcaattctctcgaacttaattctatcaaaatc 9456238  T
Q  124 aattct 129  Q
    ||||||    
T  9456239 aattct 9456244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 34010375 - 34010479
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||| ||||||||| | ||||||| ||||||||| ||| |||| || ||||||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  34010375 aagaaccacttttaaatgagtgtattcaaacataa-tcagttcatatccaactcacttttaaccaaaatcaattctttcaaactcaattctatcaaaatc 34010473  T
Q  124 aattct 129  Q
    ||||||    
T  34010474 aattct 34010479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 39391211 - 39391108
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| |||  |||||||||||||||||||||||||||| |  |||||| ||||||||||||| ||||||   ||| |||||||||||||||||    
T  39391211 aagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctaaaaaaatcaattctatcaaaatc 39391112  T
Q  124 aatt 127  Q
    ||||    
T  39391111 aatt 39391108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 41715694 - 41715797
Alignment:
Q  26 gaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaa 125  Q
    |||| |||||||| | |||| ||||||||||||||||||| ||||  |||||| |||||| |||||| |||||||| ||| |||||||||||||||||||    
T  41715694 gaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaa 41715793  T
Q  126 ttct 129  Q
    ||||    
T  41715794 ttct 41715797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 34366052 - 34365951
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||||| ||| |||||||||||||||||||||||||  ||||| | ||||||| ||||| |||||| |||||||| ||| |||||||||||||    
T  34366052 aatcacttttaat-aagcgtatccaaacataaatcaattcacacccaactaacttttaactaaaatcaattctttcaaactccattatatcaaaatcaat 34365954  T
Q  127 tct 129  Q
    |||    
T  34365953 tct 34365951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 42752244 - 42752162
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  |||| |||||||| ||||||||||||    
T  42752244 gtatccaaacataaatcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaatt 42752162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 36920252 - 36920147
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||| |||||||||  |||| |||||||||||||||| | ||  |||||| ||||||||||||| |||||| |||||||||||| |||||||||     
T  36920252 aagaatcacctttaattaaacgtattcaaacataaatcaatttatatctaactcacttttaaccaaaatcaattctttcaaactcaattttatcaaaatt 36920153  T
Q  124 aattct 129  Q
    ||||||    
T  36920152 aattct 36920147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 12632131 - 12632052
Alignment:
Q  50 caaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||||||||  |||||| |||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  12632131 caaacataaatcaattcacatctaactcacttttaaccaaaatctattctctcaaacaaaattctatcaaaatcaattct 12632052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 32186977 - 32187080
Alignment:
Q  26 gaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaa 125  Q
    |||| |||||||| | |||| ||||||||||||||||||| ||||  |||||| |||||| |||||| |||||||| ||| | |||||||||||||||||    
T  32186977 gaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaattaattctatcaaaatcaa 32187076  T
Q  126 ttct 129  Q
    ||||    
T  32187077 ttct 32187080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 39634217 - 39634134
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||| ||||||  |||| |||||||| || |||||||||||    
T  39634217 tatccaaacataaatcaattcatattcaactcacttttaaccaaaatcaattctaacaaaatcaattctgtccaaatcaattct 39634134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 24770982 - 24770880
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||| ||  || |||| ||| ||||||||||| |||| ||||||| ||||||||||||| |||| ||||||||| |||||||||||||| |||    
T  24770982 aatcacttttagttttgtatatctaaatataaatcaatttacatccaactcacttttaaccaaaatcaattatctcaaacttaattctatcaaaattaat 24770883  T
Q  127 tct 129  Q
    |||    
T  24770882 tct 24770880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 12964659 - 12964736
Alignment:
Q  50 caaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||  |||||||||||| || |||| ||||| |||| |||||||||||||||||||||||||||||    
T  12964659 caaacataaatcaatctacattcaactcacttataacgaaaatcaattatctcaaactcaattctatcaaaatcaatt 12964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 43738013 - 43737908
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||| ||  |||| | |||||| |||||| |||||||| |||||||||| | | ||||||    
T  43738013 aagaatcacttttaaataagtttatccaaacaaaaatcaattcatatctaactaacttttaatcaaaatcaattctcttaaactcaattatgttaaaatc 43737914  T
Q  124 aattct 129  Q
    ||||||    
T  43737913 aattct 43737908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 32205960 - 32206044
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactc 108  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||  ||| || ||||||  ||||| |||||| ||||||||    
T  32205960 aagaatcacttttaagtaagtgtatccaaacataaatcaattcacatcaaacccacttttaattaaaatcaattctttcaaactc 32206044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 34011035 - 34010932
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaa-ctcatttttaaccaaaattaattctctcaaactcaattctatcaaaat 122  Q
    ||||||||||||||| | | ||| ||||||||||||| |||| ||| |||| |||| ||| ||||||||| |||| ||||||||||||||||||||||||    
T  34011035 aagaatcacttttaagtgaatgtttccaaacataaattaatttacactcaaactcacttt-aaccaaaatcaattttctcaaactcaattctatcaaaat 34010937  T
Q  123 caatt 127  Q
    |||||    
T  34010936 caatt 34010932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 48134618 - 48134717
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||||  |||| ||||||||||||| ||||||| | |  ||| || ||||||| ||||| ||||||||||||||||||||||||||||| |||    
T  48134618 aatcacttttaaacaagtttatccaaacataa-tcaattctcctcaaacccacttttaacaaaaatcaattctctcaaactcaattctatcaaaattaat 48134716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 39977609 - 39977690
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||| ||||||||||||| ||  |||||| |||| || ||||| |||||| ||||||| |||||||||||||||||||    
T  39977609 tatccaaaaataaatcaattcatatcaaactcacttttgactaaaatcaattctttcaaactaaattctatcaaaatcaatt 39977690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 20088929 - 20089010
Alignment:
Q  49 ccaaacataaatcaattcacattcaactcatttttaaccaaaattaattct-ctcaaactcaattctatcaaaatcaattctt 130  Q
    |||||||||||||| || || ||||||||| ||||||||||||| |||| | || ||| ||||||||||||||||||||||||    
T  20088929 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattatacttaaa-tcaattctatcaaaatcaattctt 20089010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 37008424 - 37008325
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| |||  |||||| |||||||||||||||| |||| |  |||||| ||||||||||||| |||||   |||| |||||||||| ||||||    
T  37008424 aagaatcacttataagaaagtgtctccaaacataaatcaa-tcacctcaaactcacttttaaccaaaatcaattccaacaaaatcaattctataaaaatc 37008326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 12212484 - 12212438
Alignment:
Q  83 taaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  12212484 taaccaaaatcaattcactcaagctcaattctatcaaaatcaattct 12212438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 19097483 - 19097537
Alignment:
Q  75 ctcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||| |||||| |||||| |||||| |||||||||||||||||||||| ||||||    
T  19097483 ctcacttttaatcaaaatcaattctttcaaactcaattctatcaaaattaattct 19097537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 29829364 - 29829310
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattc 98  Q
    ||||||||||||||||||| || |||||||||||||||||| ||| ||| |||||    
T  29829364 tgtatccaaacataaatcactttacattcaactcatttttagccagaatcaattc 29829310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 38494276 - 38494325
Alignment:
Q  49 ccaaacataaatcaattcacattcaactcatttttaaccaaaattaattc 98  Q
    ||||||||||| || ||||||||||||||| ||||||||||||| |||||    
T  38494276 ccaaacataaaccacttcacattcaactcacttttaaccaaaatcaattc 38494325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 40903238 - 40903139
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||| || | | |||||||||||||| ||||| |  ||||||||| |||||  |||||| |||||| ||||| |||||| | |||||||||||    
T  40903238 aatcacttttactttaatatatccaaacataaaccaattaag-ttcaactcacttttaggcaaaatcaattctatcaaaatcaattatgtcaaaatcaat 40903140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 2839323 - 2839428
Alignment:
Q  21 aacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaa 120  Q
    |||||||||||||||| | | | || ||||||||||||||||||| |  ||||||||| |||| |  |||||  ||||| ||||| ||||||| |||| |    
T  2839323 aacaagaatcacttttgacttaatgaatccaaacataaatcaattta-gttcaactcacttttcataaaaatctattctatcaaaatcaattcaatcata 2839421  T
Q  121 atcaatt 127  Q
    |||||||    
T  2839422 atcaatt 2839428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 4228603 - 4228684
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||||| ||  ||||||||||| |||||| |||||| |||| | | ||| ||||||| | |||||||||||    
T  4228603 gtatccaaacataaatcacttttcattcaactcacttttaatcaaaatcaattatgt-aaaatcaattcaaccaaaatcaatt 4228684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 15311284 - 15311226
Alignment:
Q  30 cacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaacca 88  Q
    |||||| |||| | ||||||||||||||||||| |  |||||||||||| |||||||||    
T  15311284 cactttaaattgaatgtatccaaacataaatcactatacattcaactcacttttaacca 15311226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 25472192 - 25472150
Alignment:
Q  87 caaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||| |||||| ||||| |||||||||||||||||||||||    
T  25472192 caaaatcaattctgtcaaaatcaattctatcaaaatcaattct 25472150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 16079460 - 16079512
Alignment:
Q  47 atccaaacataaatcaattcacattcaactcatttttaaccaaaattaattct 99  Q
    |||||||||||||||| ||  ||||||||||| ||| ||||||||| ||||||    
T  16079460 atccaaacataaatcacttttcattcaactcactttaaaccaaaatcaattct 16079512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 25472205 - 25472165
Alignment:
Q  89 aaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||| |||||||||||| |||||||| ||||||||||||||    
T  25472205 aaatcaattctctcaaaatcaattctgtcaaaatcaattct 25472165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 46285414 - 46285312
Alignment:
Q  24 aagaatcactttta-attaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaat 122  Q
    |||||||||||| | ||||| ||||||||||||||||| ||||  || |||| |||||||||| || ||| ||||   ||||| |||||| |||||||||    
T  46285414 aagaatcactttcatattaa-tgtatccaaacataaattaattt-cactcaattcatttttaatcagaatcaattaattcaaaatcaattatatcaaaat 46285317  T
Q  123 caatt 127  Q
    |||||    
T  46285316 caatt 46285312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 22936882 - 22936775
Alignment:
Q  22 acaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaa 121  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||    
T  22936882 acaagaatcacttctaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattctatcaaaa 22936783  T
Q  122 tcaattct 129  Q
    ||||||||    
T  22936782 tcaattct 22936775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 3467555 - 3467660
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| ||| | |||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  3467555 aagaatcacttttaaataaatatatccaaacagaaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 3467654  T
Q  124 aattct 129  Q
    ||||||    
T  3467655 aattct 3467660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 41289155 - 41289040
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattc 113  Q
    ||||||| | |||||||||||||| | ||||||||||||||||||||||||||||| |||||||| ||||||  ||||| ||||||||||||||||||||    
T  41289155 atcaacctataagaatcacttttagtaaagtgtatccaaacataaatcaattcacaatcaactcacttttaattaaaatcaattctctcaaactcaattc 41289056  T
Q  114 tatcaaaatcaattct 129  Q
    | ||||||||||||||    
T  41289055 tgtcaaaatcaattct 41289040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 25698046 - 25697942
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||||| ||||||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  25698046 aagaatcacttttaaataagtttatccaaacataa-tcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattctatcaaaatc 25697948  T
Q  124 aattct 129  Q
    ||||||    
T  25697947 aattct 25697942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 3097293 - 3097188
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | ||| |||||||||||||||||||||| ||  |||||| ||||||||||||| |||||||||||||||||||||||||||||     
T  3097293 aagaatcacttttaagtgagtatatccaaacataaatcaattcatatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatt 3097194  T
Q  124 aattct 129  Q
    ||||||    
T  3097193 aattct 3097188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 43550903 - 43550991
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctc 102  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||    
T  43550903 atcaacccacaagaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattttctc 43550991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 440276 - 440173
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||| |||||| | | ||||||||||||||||||||||||||| |||||||  |||||||||||| |||||||||| |||||||||||||||||||    
T  440276 aagaatcatttttaactgaatgtatccaaacataaatcaattcacatccaactcacatttaaccaaaatcaattctctcagactcaattctatcaaaatc 440177  T
Q  124 aatt 127  Q
    ||||    
T  440176 aatt 440173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 25497717 - 25497819
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||  |||||||||| |||||||||||||    
T  25497717 aatcacttttaaataagtgtatccaaacataa-tcaattcacatccaactcacttttaaccaaaatcaattctcctaaactcaattttatcaaaatcaat 25497815  T
Q  127 tctt 130  Q
    ||||    
T  25497816 tctt 25497819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 40742133 - 40742236
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    |||||||||  | |||||||| ||||| | |||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  40742133 aatatcaactcataagaatcaattttattaaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 40742232  T
Q  111 ttct 114  Q
    ||||    
T  40742233 ttct 40742236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 15206718 - 15206823
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| ||| | | ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||| | ||||||||||||||||||||||     
T  15206718 aagaatcacttctaagtcaatgtatccaaacataaatcaattcacattcaactcacttttacccaaaatcaattttgtcaaactcaattctatcaaaatt 15206817  T
Q  124 aattct 129  Q
    ||||||    
T  15206818 aattct 15206823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 44926863 - 44926967
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||||  |||||||||||||||||| ||||||||| |  |||||| ||||||||||||| ||||||||||||||||||||||||||| ||    
T  44926863 aagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaactc 44926961  T
Q  124 aattct 129  Q
    ||||||    
T  44926962 aattct 44926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 33627121 - 33627017
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||| | ||||||||||||||||||||||||||  || ||||||| ||||||  ||||| |||||| |||||||||||||||||||||||    
T  33627121 aagaatcacttttagtaaagtgtatccaaacataaatcaattcttatccaactcagttttaaataaaatcaattctttcaaactcaattctatcaaaatc 33627022  T
Q  124 aattc 128  Q
    |||||    
T  33627021 aattc 33627017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 36121630 - 36121527
Alignment:
Q  25 agaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatca 124  Q
    |||||||||| || | |||||||||||||||||| || |||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||||||    
T  36121630 agaatcacttatagtaaagtgtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatca 36121532  T
Q  125 attct 129  Q
    |||||    
T  36121531 attct 36121527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 26243146 - 26243260
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||||  || | |||||||||||||||||||||| ||  |||||| ||||||| ||||| |||||||| |||||||||||||||||||||    
T  26243146 aagaatcacttttaaacaattatatccaaacataaatcaattcatatcaaactcacttttaacaaaaatcaattctcttaaactcaattctatcaaaatc 26243245  T
Q  124 aattcttcctgccgc 138  Q
    ||||||  |||||||    
T  26243246 aattctcactgccgc 26243260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 42143451 - 42143346
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| |  |||||| ||||||| ||||| |||| |||||||||||||| ||||| ||||    
T  42143451 aagaatcacttttaaataagtttatccaaacataaatcaattcacctcaaactcacttttaactaaaatcaattttctcaaactcaattatatcataatc 42143352  T
Q  124 aattct 129  Q
    ||||||    
T  42143351 aattct 42143346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 6399195 - 6399092
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | |||||||| ||||||||||||||||||||  |||||| ||||||||| ||| |||||| ||||||||||||||| || ||||    
T  6399195 aagaatcacttttaagtgagtgtatcgaaacataaatcaattcacatcaaactcacttttaaccataatcaattctatcaaactcaattctaccagaatc 6399096  T
Q  124 aatt 127  Q
    ||||    
T  6399095 aatt 6399092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 28425559 - 28425456
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| |||  |||||||||||||||||||||||||||| |  |||||| ||||||||||||| ||||||  |||| |||||||||||||||||    
T  28425559 aagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctaacaaaatcaattctatcaaaatc 28425460  T
Q  124 aatt 127  Q
    ||||    
T  28425459 aatt 28425456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 30759363 - 30759284
Alignment:
Q  53 acataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattcttcc 132  Q
    |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  30759363 acataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattatattaaaatcaattcttcc 30759284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 38114485 - 38114571
Alignment:
Q  42 agtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||||||||| ||||||||||| ||||| | ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  38114485 agtgtatccaaacataa-tcaattcacatccaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaataaattct 38114571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 4941868 - 4941763
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||| ||||||| ||| | ||||||||||||||||||||||| |  |||||| |||||| |||||| ||||||||||||||||||| ||||| ||||    
T  4941868 aagaatcgcttttaaataattttatccaaacataaatcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaattatatcagaatc 4941769  T
Q  124 aattct 129  Q
    ||||||    
T  4941768 aattct 4941763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 24897674 - 24897558
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||| |||||| ||| ||||||||||||||| ||| |||| || ||||||| ||||||||||||| |||||||  |||||||||| ||||||||||    
T  24897674 aagaatcaattttaaataaatgtatccaaacataattca-ttcatatccaactcacttttaaccaaaatcaattctcataaactcaattttatcaaaatc 24897576  T
Q  124 aattcttcctgccgccat 141  Q
    ||||||| | ||||||||    
T  24897575 aattcttaccgccgccat 24897558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 27649768 - 27649872
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | |||||||| |||||||  |||||||| || ||| ||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  27649768 aagaatcacttttaaatgagtgtatctaaacatat-tcaattcatatccaaatcacttttaaccaaaatcaattctttcaaactcaattctatcaaaatc 27649866  T
Q  124 aattct 129  Q
    ||||||    
T  27649867 aattct 27649872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 8124993 - 8125095
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | ||||||||||||||||| |||||||||||  |||||| || |||||||||| ||||||||||||||| |||| | |||||||    
T  8124993 aagaatcacttttaaatgagtgtatccaaacataa-tcaattcacatcaaactcacttctaaccaaaatcaattctctcaaactcgattcaaccaaaatc 8125091  T
Q  124 aatt 127  Q
    ||||    
T  8125092 aatt 8125095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 31246402 - 31246299
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||  || |  |||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  |||| |||||||| ||||||||    
T  31246402 aagaatcacttttgctttaaggtatccaaacataaatcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatc 31246303  T
Q  124 aatt 127  Q
    ||||    
T  31246302 aatt 31246299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 40742364 - 40742277
Alignment:
Q  42 agtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||||||||||||| ||  |||||| ||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  40742364 agtgtatccaaacataaatcaattcagatcaaactcacttttaacgaaaatcaattcttttaaactcaattctatcaaaatcaattct 40742277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 36114140 - 36114023
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    |||||||||  | |||||||||||||||   |||||||||||||||||  ||||  ||||  |||| | |||||| |||||| |||||||||||||||||    
T  36114140 aatatcaactcataagaatcacttttaaacgagtgtatccaaacataac-caatctacatcaaacttacttttaatcaaaatcaattctctcaaactcaa 36114042  T
Q  111 ttctatcaaaatcaattct 129  Q
    |||||||||||||||||||    
T  36114041 ttctatcaaaatcaattct 36114023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 35615733 - 35615836
Alignment:
Q  26 gaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaa 125  Q
    |||||| |||||| | | |||||| |||||||||||||||| ||||||||||| || |  ||||||| |||  | |||||||||||||||||||||||||    
T  35615733 gaatcaattttaagtgaatgtatctaaacataaatcaattcccattcaactcacttctttccaaaatcaatcttgtcaaactcaattctatcaaaatcaa 35615832  T
Q  126 ttct 129  Q
    ||||    
T  35615833 ttct 35615836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 38152261 - 38152157
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||| |||||| ||| | | |||||||||||||||||| ||||  |||||| ||| ||| ||||| |||| ||||||||| |||||||||||||||    
T  38152261 aagaatcatttttaagtaaatatttccaaacataaatcaatttacatcaaactcacttt-aactaaaatcaattttctcaaacttaattctatcaaaatc 38152163  T
Q  124 aattct 129  Q
    ||||||    
T  38152162 aattct 38152157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 42149029 - 42149117
Alignment:
Q  26 gaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattct 114  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |  |||||| ||||||||||||| |||| | ||| | ||||||||    
T  42149029 gaatcacttttaaataagtctatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattatatcagaatcaattct 42149117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 30081715 - 30081635
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||||||||||||||| || |||||| ||||||| ||||| |||| || |||| |||||| ||||||||||||||    
T  30081715 tatccaaacataaatcaattcacttt-aactcacttttaactaaaatcaattttcacaaaatcaattttatcaaaatcaatt 30081635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 3465478 - 3465422
Alignment:
Q  73 aactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||| || |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  3465478 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 3465422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 36779414 - 36779517
Alignment:
Q  26 gaatcacttttaatt-aagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatca 124  Q
    ||||||||||||||| ||   ||||||||||||||| | || |||||||||||| |||||| |||||| ||||||  |||| |||||| |||||||||||    
T  36779414 gaatcacttttaatttaaaaatatccaaacataaattactttacattcaactcacttttaatcaaaatcaattct-acaaaatcaattatatcaaaatca 36779512  T
Q  125 attct 129  Q
    |||||    
T  36779513 attct 36779517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 26490955 - 26491060
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| ||  |||  ||||||||||| ||||||||| ||| |||||||| ||||||||||||| ||||||  |||| |||||| |  || ||||    
T  26490955 aagaatcacttctatataaaggtatccaaacacaaatcaatttacactcaactcacttttaaccaaaatcaattctaccaaaatcaattttgacagaatc 26491054  T
Q  124 aattct 129  Q
    ||||||    
T  26491055 aattct 26491060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 30085670 - 30085621
Alignment:
Q  80 ttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||||| |||||||| |||||||||| ||||||||||||||||    
T  30085670 ttttaaccaaaatcaattctcttaaactcaattatatcaaaatcaattct 30085621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 19649229 - 19649281
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaatt 97  Q
    |||||||||||||||||| || |||||||||||| ||||||||||||| ||||    
T  19649229 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaatt 19649281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 29023308 - 29023348
Alignment:
Q  87 caaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  29023308 caaaatcaattctctcaaactcaattctatcaaaatcaatt 29023348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 8702474 - 8702392
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||||||||||||||  | ||||| ||||||||||| ||||| |||| |   ||| |||||||||||||||||||||    
T  8702474 tgtatccaaacataaatcaattatc-ttcaaatcatttttaactaaaatcaattttgctaaagtcaattctatcaaaatcaatt 8702392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 10552969 - 10552923
Alignment:
Q  51 aaacataaatcaattcacattcaactcatttttaaccaaaattaatt 97  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||    
T  10552969 aaacataaatcaatttacattcaactcacttttaaccaaaatcaatt 10552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 29970845 - 29970926
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||||| || | | |||||||| ||||||| ||||| |||| |  |||| |||||||||||||||||||||    
T  29970845 gtatccaaacataaatcactttaaactcaactcacttttaactaaaatcaattat-acaaattcaattctatcaaaatcaatt 29970926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 34342940 - 34342872
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaatt 93  Q
    ||||||||||||||| ||| | |||||||||| ||||||||||| | || ||||| ||||||||||||||    
T  34342940 aagaatcacttttaaataaatttatccaaacaaaaatcaattcata-tctactcacttttaaccaaaatt 34342872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 3619155 - 3619053
Alignment:
Q  24 aagaatcactttta-attaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaat 122  Q
    |||||||||||| | ||||| |||||||||||| |||||||||  || |||||||| |||| | || ||| |||||  ||||| ||||||||||||||||    
T  3619155 aagaatcactttcatattaa-tgtatccaaacacaaatcaattt-cactcaactcacttttgatcagaatcaattcattcaaaatcaattctatcaaaat 3619058  T
Q  123 caatt 127  Q
    |||||    
T  3619057 caatt 3619053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 23018137 - 23018209
Alignment:
Q  43 gtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattcta 115  Q
    |||||||||||||||||| |||| | | |||||||| |||| | |||||| |||||  |||||||||||||||    
T  23018137 gtgtatccaaacataaataaatttatactcaactcacttttgatcaaaatcaattcgatcaaactcaattcta 23018209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 39219765 - 39219824
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaa 105  Q
    ||||||||||||||||| |||| ||| |||||| ||||||| ||||| |||||| |||||    
T  39219765 tatccaaacataaatcacttcatattaaactcacttttaacgaaaatcaattctatcaaa 39219824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 42600968 - 42601031
Alignment:
Q  49 ccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    ||||| |||||||||||||||||||||||| ||| ||| ||||| |||||| | ||| ||||||    
T  42600968 ccaaaaataaatcaattcacattcaactcactttgaacaaaaatcaattctgttaaaatcaatt 42601031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 45147350 - 45147247
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    |||||||||  | ||||||||||||||| | || || |||||||||||   ||||  ||||||||||| ||||||||||| |  ||||| ||||| ||||    
T  45147350 aatatcaacttataagaatcacttttaaatgagagtgtccaaacataaccaaatttgcattcaactcacttttaaccaaattcgattctatcaaaatcaa 45147251  T
Q  111 ttct 114  Q
    ||||    
T  45147250 ttct 45147247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 1373064 - 1373134
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaatt 97  Q
    ||||||||||   ||| ||||||||||||||||||| ||||  ||||||||| ||||| ||||||| ||||    
T  1373064 aatcacttttttgtaattgtatccaaacataaatcacttcaacttcaactcacttttatccaaaatcaatt 1373134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 2071630 - 2071565
Alignment:
Q  48 tccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattct 114  Q
    ||||||||| |||||||| |||||||||||| |||||  |||||| |||||| ||||| ||||||||    
T  2071630 tccaaacatgaatcaatt-acattcaactcacttttagtcaaaatcaattctgtcaaaatcaattct 2071565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 26125842 - 26125884
Alignment:
Q  87 caaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||| |||||||| |||||||||||||||||||| ||||||    
T  26125842 caaaatcaattctcttaaactcaattctatcaaaattaattct 26125884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 37667122 - 37667057
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaatt 112  Q
    |||||||| ||||||||||||||||| |||| | ||||||| ||||| |||||| ||||| ||||||    
T  37667122 tatccaaatataaatcaattcacattaaactta-ttttaacgaaaatcaattctatcaaaatcaatt 37667057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 40792264 - 40792188
Alignment:
Q  50 caaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||| |||||||||||  ||||||||||| |||||| |||||| |||| | ||||| |||||| ||| ||||||||||    
T  40792264 caaatataaatcaattg-cattcaactcacttttaatcaaaatcaattatatcaaaatcaattttattaaaatcaatt 40792188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 22552804 - 22552724
Alignment:
Q  47 atccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||||||  |  |||||||| ||||| ||||||| |||||  | ||| |||||| | ||||||||||||    
T  22552804 atccaaacataaatcaattttccatcaactcacttttatccaaaatcaattcaattaaaatcaattatgtcaaaatcaatt 22552724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 129
Target Start/End: Original strand, 26125826 - 26125854
Alignment:
Q  101 tcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||||||||||||||||    
T  26125826 tcaaactcaattctatcaaaatcaattct 26125854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 26575890 - 26575930
Alignment:
Q  89 aaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||| |||||||||||| |||||||||||| ||||||||||    
T  26575890 aaatcaattctctcaaaatcaattctatcagaatcaattct 26575930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 31895809 - 31895765
Alignment:
Q  55 ataaatcaattcacattcaactcatttttaaccaaaattaattct 99  Q
    |||||||| |||||||||| |||| ||||||| ||||||||||||    
T  31895809 ataaatcatttcacattcatctcacttttaactaaaattaattct 31895765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 32767479 - 32767519
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcattttta 84  Q
    |||||||||||||||||||||| |||| ||||||| |||||    
T  32767479 tgtatccaaacataaatcaatttacatccaactcactttta 32767519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 9e-42; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 26519665 - 26519783
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    ||||||||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| | |||||| |||||||||||||||||    
T  26519665 aatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaa 26519764  T
Q  111 ttctatcaaaatcaattct 129  Q
    |||||||||||||||||||    
T  26519765 ttctatcaaaatcaattct 26519783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 50664772 - 50664877
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  50664772 aagaatcacttctaagtgtgtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 50664871  T
Q  124 aattct 129  Q
    ||||||    
T  50664872 aattct 50664877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 10334152 - 10334257
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||| ||||||| | ||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||    
T  10334152 aagaattacttttagtaaagtgtatccaaacataaatcaattcatattcaactgacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 10334251  T
Q  124 aattct 129  Q
    ||||||    
T  10334252 aattct 10334257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 23496352 - 23496436
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23496352 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 23496436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 10853354 - 10853249
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | ||| |||||||||||||||||||| | ||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  10853354 aagaatcacttttaagtgagtatatccaaacataaatcaatttatattaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 10853255  T
Q  124 aattct 129  Q
    ||||||    
T  10853254 aattct 10853249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 38172394 - 38172289
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| || | |||||||||||||||||||||||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||| ||||||    
T  38172394 aagaatcacttctattaaagtgtatccaaacataaatcaattcacatcccactcacttttaaccaaaatcaattctctcaaactcaattctattaaaatc 38172295  T
Q  124 aattct 129  Q
    ||||||    
T  38172294 aattct 38172289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 35425335 - 35425452
Alignment:
Q  11 aatatcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    |||||||||  | ||||||||||| |  | |||||||||||||||||| ||||||||||||||||||| |||||| |||||| |||||||||||||||||    
T  35425335 aatatcaactcataagaatcacttctgttaaagtgtatccaaacataa-tcaattcacattcaactcacttttaatcaaaatcaattctctcaaactcaa 35425433  T
Q  111 ttctatcaaaatcaattct 129  Q
    |||||||||||||||||||    
T  35425434 ttctatcaaaatcaattct 35425452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 8424816 - 8424714
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| || | |||||||||||||||||| ||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||    
T  8424816 aagaatcacttctattgaagtgtatccaaacataa-tcaattcacgttcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaattc 8424718  T
Q  124 aatt 127  Q
    ||||    
T  8424717 aatt 8424714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 3348257 - 3348362
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||| ||||||||  ||||||||||||||||||||||||| |||| ||||||| || |||||||||| ||||| || |||||||||||||||||||||    
T  3348257 aagaattacttttaaggaagtgtatccaaacataaatcaatttacatccaactcacttctaaccaaaatcaattcacttaaactcaattctatcaaaatc 3348356  T
Q  124 aattct 129  Q
    ||||||    
T  3348357 aattct 3348362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 4984595 - 4984700
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||||   |||||||||||||||||||||||||||||  |||||| ||||||||||||| |||| ||||||| |||||| ||||||||||    
T  4984595 aagaatcacttttaaacgagtgtatccaaacataaatcaattcacatctaactcacttttaaccaaaatcaattttctcaaattcaattatatcaaaatc 4984694  T
Q  124 aattct 129  Q
    ||||||    
T  4984695 aattct 4984700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 55154529 - 55154620
Alignment:
Q  37 aattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||| |||||||| |||||||| ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  55154529 aatttagtgtatctaaacataa-tcaattcacattcaactcacttttaactaaaatcaattctctcaaactcaattctatcaaaatcaattct 55154620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 42318344 - 42318446
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||| ||  |||||||||||||||||| ||||||||| |  |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  42318344 aagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 42318442  T
Q  124 aatt 127  Q
    ||||    
T  42318443 aatt 42318446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 52966896 - 52966793
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | || ||| ||||||||||||||||||||||  || ||| ||||||||||||| |||||||||||| |||||||||||||||||    
T  52966896 aagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaaagtcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatc 52966797  T
Q  124 aatt 127  Q
    ||||    
T  52966796 aatt 52966793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 53074917 - 53075019
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||| |  |||||| ||||||||||||| ||||||||||||||||||| ||||||||||    
T  53074917 aagaatcacttttaagtgagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatc 53075015  T
Q  124 aatt 127  Q
    ||||    
T  53075016 aatt 53075019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 30811618 - 30811514
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| |  | |||||||||||||||||| ||||||||||||||||||| |||||| |||||| |||||||||||| |||||| ||||||||||    
T  30811618 aagaatcacttctgttaaagtgtatccaaacataa-tcaattcacattcaactcacttttaatcaaaatcaattctctcaaattcaattatatcaaaatc 30811520  T
Q  124 aattct 129  Q
    ||||||    
T  30811519 aattct 30811514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 42475723 - 42475828
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||| |||||||  |||||||| |||||| ||||||||||||||  |||||| |||||| |||||| ||||||||||||||||||||||| ||||||    
T  42475723 aagaatcgcttttaacaaagtgtattcaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctataaaaatc 42475822  T
Q  124 aattct 129  Q
    ||||||    
T  42475823 aattct 42475828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 15511459 - 15511360
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||||| ||| |||||||||||||||||||||||||  ||||||| ||||||||||||| |||||| ||||||||  ||||||||||||||||    
T  15511459 aatcacttttaat-aagcgtatccaaacataaatcaattcacacccaactcacttttaaccaaaatcaattctttcaaactccgttctatcaaaatcaat 15511361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 44224776 - 44224892
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||  |||||| ||||||||| ||| |||| ||||||||||||||||| |  ||||    
T  44224776 aagaatcacttttaagtgagtgtatccaaacataaatcaattcatatcaaactcacttttaaccataatcaattatctcaaactcaattctaccggaatc 44224875  T
Q  124 aattcttcctgccgcca 140  Q
    |||||| || |||||||    
T  44224876 aattctccccgccgcca 44224892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 48189509 - 48189426
Alignment:
Q  43 gtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||| |||||| |||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  48189509 gtgtatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaatt 48189426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 34561142 - 34561225
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||| |||| | ||||||| |||||||||||||||||||    
T  34561142 tgtatccaaacataaatcaattcgcattcaactcacttttaaccaaaatcaattttatcaaacttaattctatcaaaatcaatt 34561225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 38340841 - 38340924
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| |||||||  ||||||||||||||||||||    
T  38340841 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctttcaaacttcattctatcaaaatcaattct 38340924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 31084222 - 31084311
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattct 114  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| ||||| ||||||||    
T  31084222 aagaatcacttttaag-aagtgtatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctttcaaaatcaattct 31084311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 20813160 - 20813264
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||| | ||||| |||||||||| ||||||||||| || ||||||| |||||||||||   ||||||||||||||| ||||||||||||||    
T  20813160 aagaatcacttttgaataagtatatccaaacaaaaatcaattcaaatccaactcacttttaaccaaacacaattctctcaaactc-attctatcaaaatc 20813258  T
Q  124 aattct 129  Q
    ||||||    
T  20813259 aattct 20813264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 21225004 - 21225109
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||| |||||||  ||||||||||||||||| ||||||| ||||  |||||| ||||||||||||| |||||||||||||||||||||||  | |||    
T  21225004 aagaatcgcttttaagaaagtgtatccaaacatatatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatagagatc 21225103  T
Q  124 aattct 129  Q
    ||||||    
T  21225104 aattct 21225109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 38125528 - 38125424
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||| ||  |||||||||||||||||| ||||||||| |  ||| || ||||||||||||| |||||||||||| |||||||||||||||||    
T  38125528 aagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaacccacttttaaccaaaatcaattctctcaaattcaattctatcaaaatc 38125430  T
Q  124 aattct 129  Q
    ||||||    
T  38125429 aattct 38125424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 23207152 - 23207052
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    |||||||| |||  ||||||||||||||||||||||||||||||  |||||||||||||||||||| |||| |  |||| |||||| |||||||||||||    
T  23207152 aatcacttgtaaaaaagtgtatccaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattataacaaaatcaattatatcaaaatcaat 23207053  T
Q  127 t 127  Q
    |    
T  23207052 t 23207052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 35930770 - 35930857
Alignment:
Q  42 agtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||| |||||||||||||| ||  |||||| ||||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  35930770 agtgtatccaagcataaatcaattcatatcaaactcacttttaataaaaatcaattctctcaaactcaattctatcaaaatcaattct 35930857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 19877448 - 19877534
Alignment:
Q  41 aagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||| |||| ||||||||||||||| |||| ||||||| ||||||||||||| |||||| |||||||||||||||||||||| ||||    
T  19877448 aagtatatctaaacataaatcaatttacatccaactcacttttaaccaaaatcaattctttcaaactcaattctatcaaaataaatt 19877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 53179865 - 53179958
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaa 120  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||  |||||| ||||||||||||| |||| | | ||||||||||||||||||    
T  53179865 aatcacttttaaaaaagtgtatccaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattatataaaactcaattctatcaaa 53179958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 29716773 - 29716674
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||||||||  || || | | ||||||||||||| ||| |||||| ||||||||||||| |||||||||||| |||||| ||||||||||    
T  29716773 aagaatcacttttaattaaacgtgtctataaataaatcaattcatatttaactcacttttaaccaaaatcaattctctcaaattcaattttatcaaaatc 29716674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 44939482 - 44939400
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||||||| |||||||| |||||||||| |||||| |||||| ||||| |||||| |||||||||||||||||||||    
T  44939482 tgtatccaaacataa-tcaattcatattcaactcacttttaatcaaaatcaattcactcaaattcaattctatcaaaatcaatt 44939400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 25848046 - 25848136
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattct 114  Q
    |||||||| |||||| | |  ||||||||||||||||||||||| ||| |||||| |||| ||||||||||||| ||||||||||||||||    
T  25848046 aagaatcatttttaagtgaaggtatccaaacataaatcaattcatattaaactcactttttaccaaaattaattttctcaaactcaattct 25848136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 16246181 - 16246078
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| || | |||||| |||||||||||||||||| ||||  |||||| ||||||| ||||| |||  |||||||||||||||||| || |||    
T  16246181 aagaatcacttctattaaagtgtttccaaacataaatcaatttacatctaactcacttttaactaaaatcaat--tctcaaactcaattctattaatatc 16246084  T
Q  124 aattct 129  Q
    ||||||    
T  16246083 aattct 16246078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 40415361 - 40415278
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||||||| |||| |||| ||||||| ||||||| |||||  ||||  | |||||||||||||||||||||||||||    
T  40415361 tatccaaacataaattaatttacatccaactcacttttaactaaaatcgattcctttaaactcaattctatcaaaatcaattct 40415278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 30810032 - 30809942
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattct 114  Q
    ||||||||||||||| |||| |||  ||| |||||||||||||||||| |||||| ||||||||||| | |||| | ||||| ||||||||    
T  30810032 aagaatcacttttaagtaagcgtaatcaatcataaatcaattcacatttaactcacttttaaccaaactcaattttatcaaaatcaattct 30809942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 49526736 - 49526650
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattctt 130  Q
    |||||||||||||||||||||| ||| |||| ||| |||||| |||||| |||||| ||||| ||||||  |||||| |||||||||    
T  49526736 tgtatccaaacataaatcaatttacaatcaattcacttttaatcaaaatcaattctatcaaaatcaatttcatcaaactcaattctt 49526650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 22737055 - 22737134
Alignment:
Q  51 aaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattctt 130  Q
    ||||||||||||||| |||||| ||| | ||||||||||||| |||| | ||||||||||||||||| | || |||||||    
T  22737055 aaacataaatcaatttacattctacttacttttaaccaaaatcaattttttcaaactcaattctatcgatattaattctt 22737134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 7012675 - 7012729
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattct 99  Q
    |||||||||||||||||| || |||||||||||| ||||||||||||| ||||||    
T  7012675 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 7012729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 23918881 - 23918931
Alignment:
Q  49 ccaaacataaatcaattcacattcaactcatttttaaccaaaattaattct 99  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  23918881 ccaaacataaatcactttacattcaactcacttttaaccaaaattaattct 23918931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 52813278 - 52813332
Alignment:
Q  73 aactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||| || |||||||||| ||||| ||||||||||||||||||||||||||||    
T  52813278 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 52813332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 14651185 - 14651085
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    |||||||| ||  ||||| |||| ||||| ||||||||| | |||||||||| |||||| |||||| |||||| ||||| |||||| ||| |||||||||    
T  14651185 aatcacttctatgtaagtatatcaaaacacaaatcaatt-atattcaactcacttttaatcaaaatcaattctatcaaaatcaattttattaaaatcaat 14651087  T
Q  127 tc 128  Q
    ||    
T  14651086 tc 14651085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 31766259 - 31766159
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||  |||| ||||||||||||||||||| || |  ||||||||| ||||| |||||||||||| |  |||| |||||||  |||||||||||    
T  31766259 aatcacttttttttaattgtatccaaacataaatcactttaacttcaactcacttttatccaaaattaatt-ttacaaaatcaattcattcaaaatcaat 31766161  T
Q  127 tc 128  Q
    ||    
T  31766160 tc 31766159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 42644298 - 42644381
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||||||||| || |||||||||||| ||||||| ||||| |||| |   ||| |||||||  ||||||||||||||    
T  42644298 tatccaaacataaatcactttacattcaactcacttttaactaaaatcaatttttataaaatcaattcactcaaaatcaattct 42644381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 21023281 - 21023201
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||| |||||||||||| |||| ||||||||||  |||||||||||| |||| |  |||| |||||||||||||||||||||    
T  21023281 gtatctaaacataaatcacttcaaattcaactcacatttaaccaaaatcaatt-ttacaaa-tcaattctatcaaaatcaatt 21023201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 44225600 - 44225681
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||||| || ||||| |||||| ||||||| ||||| ||||||  |||| |||||| ||| ||||||||||    
T  44225600 gtatccaaacataaatcactttacattaaactcacttttaacgaaaatcaattct-acaaaatcaattatattaaaatcaatt 44225681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 10852775 - 10852727
Alignment:
Q  49 ccaaacataaatcaattcacattcaactcatttttaaccaaaattaatt 97  Q
    |||||||||||||| || |||||||||||| ||||||||||||| ||||    
T  10852775 ccaaacataaatcactttacattcaactcacttttaaccaaaatcaatt 10852727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 25181245 - 25181328
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||| | || ||||| |||||| |||||| |||||| ||||||  |||| ||||||| ||||| |||||||||    
T  25181245 gtatccaaacataaataattttacattaaactcacttttaatcaaaatcaattct-acaaaatcaattcaatcaatatcaattct 25181328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 31618422 - 31618391
Alignment:
Q  101 tcaaactcaattctatcaaaatcaattcttcc 132  Q
    ||||||||||||||||||||||||||||||||    
T  31618422 tcaaactcaattctatcaaaatcaattcttcc 31618391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 129
Target Start/End: Original strand, 35930876 - 35930907
Alignment:
Q  98 ctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||||||||||||||||||||||||    
T  35930876 ctctcaaactcaattctatcaaaatcaattct 35930907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 38626750 - 38626788
Alignment:
Q  48 tccaaacataaatcaattcacattcaactcatttttaac 86  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  38626750 tccaaacataaatcatttcacattcaactcacttttaac 38626788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 52931640 - 52931586
Alignment:
Q  43 gtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaatt 97  Q
    ||||||||||||||||||||||| ||| | |||||| ||||||| ||||| ||||    
T  52931640 gtgtatccaaacataaatcaatttacactaaactcacttttaactaaaatcaatt 52931586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 53078394 - 53078474
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||||||||||||    |||||||||||| |||| ||||| ||||||  |||| | ||||| |||||||||||||    
T  53078394 tatccaaacataaatcaatttttgttcaactcatttctaactaaaatcaattct-acaaaattaattcaatcaaaatcaatt 53078474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 11264360 - 11264400
Alignment:
Q  89 aaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||||||||| |||||||| ||| ||||||||||    
T  11264360 aaattaattctctcaaaatcaattctgtcacaatcaattct 11264400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 31618974 - 31618930
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcac 68  Q
    ||||||||||| ||| | || ||||||||||||||||||||||||    
T  31618974 aagaatcacttctaagtgagagtatccaaacataaatcaattcac 31618930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 41591348 - 41591308
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcattttta 84  Q
    ||||||||||||||||||| || | ||||||||||||||||    
T  41591348 tgtatccaaacataaatcactttaaattcaactcattttta 41591308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 17830095 - 17829980
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattc 113  Q
    ||||||| |||||||  |||| |||| || |||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  17830095 atcaacccacaagaacgacttctaataaactgtaactaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattc 17829996  T
Q  114 tatcaaaatcaattct 129  Q
    ||||||||||||||||    
T  17829995 tatcaaaatcaattct 17829980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 10826105 - 10826210
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| |||||||||     
T  10826105 aagaatcacttttaaataagtatatccaaacaaaaatcaattcaaattcaactcacttttaaccaaaatcaattctctcaaactcaattttatcaaaatt 10826204  T
Q  124 aattct 129  Q
    ||||||    
T  10826205 aattct 10826210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 13739220 - 13739324
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||||  |||||||||||||||||| ||||||||| |  |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  13739220 aagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 13739318  T
Q  124 aattct 129  Q
    ||||||    
T  13739319 aattct 13739324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 13744720 - 13744824
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||||  |||||||||||||||||| ||||||||| |  |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  13744720 aagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 13744818  T
Q  124 aattct 129  Q
    ||||||    
T  13744819 aattct 13744824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 33899092 - 33898987
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||  | |||||||||||||||||||||||||| ||  |||||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  33899092 aagaatcacttttacattagtgtatccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatc 33898993  T
Q  124 aattct 129  Q
    ||||||    
T  33898992 aattct 33898987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 6208149 - 6208047
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||| | |||||||||||||||||| ||||||||||||||||||| |||||| |||||| ||||| |||||| |||||||||||||||||    
T  6208149 aagaatcacttttagtaaagtgtatccaaacataa-tcaattcacattcaactcacttttaatcaaaatcaattcactcaaaatcaattctatcaaaatc 6208051  T
Q  124 aatt 127  Q
    ||||    
T  6208050 aatt 6208047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 16548143 - 16548229
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctc 100  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  16548143 atcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctc 16548229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 16442435 - 16442347
Alignment:
Q  26 gaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattct 114  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| ||||| |||||||||||| ||||||||    
T  16442435 gaatcacttttaaataagtgtatccaaacataaatcaattcacattcaactcacttgtaactaaaatcaattctctcaaaatcaattct 16442347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 31132468 - 31132580
Alignment:
Q  14 atcaaccaacaagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattc 113  Q
    ||||||| | ||||||||||||||| |||||||||||||| ||||   |||| |||| ||||||||||||| ||||||| |||| |||||||||||||||    
T  31132468 atcaacccataagaatcacttttaaataagtgtatccaaaaataacg-aattaacatccaactcatttttagccaaaataaattatctcaaactcaattc 31132566  T
Q  114 tatcaaaatcaatt 127  Q
    ||||||||||||||    
T  31132567 tatcaaaatcaatt 31132580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 29409338 - 29409235
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||| ||||||  || |||||||||||||||||||||||||||  |||||| |||||| |||||| |||||| |||||||||||||||| ||||||    
T  29409338 aagaatcatttttaaaaaactgtatccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaattctttcaaactcaattctattaaaatc 29409239  T
Q  124 aatt 127  Q
    ||||    
T  29409238 aatt 29409235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 1312506 - 1312423
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||||| |||| | |||||||| ||||||||||||||||||    
T  1312506 tgtatccgaacataaatcaattcgcattcaactcacttttaaccaaaatcaattttatcaaactcgattctatcaaaatcaatt 1312423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 21254945 - 21254863
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||| | ||||||||||||||||||||||||||| ||||||    
T  21254945 tgtatccaaacataaatcaatt-acattcaactcacttttaatcaaattcaattctctcaaactcaattctatcaaactcaatt 21254863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 699571 - 699674
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||| ||||||| | ||||| ||||||||||||||||||||  || ||||||| ||| ||| ||||| |||||| |||||||||||||||||||||||    
T  699571 aagaattacttttagtaaagtgcatccaaacataaatcaattcttatccaactcacttt-aactaaaatcaattctttcaaactcaattctatcaaaatc 699669  T
Q  124 aattc 128  Q
    |||||    
T  699670 aattc 699674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 5584113 - 5584031
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||||||| ||||| |||||| |||||  |||||| |||||| ||||| |||||||||||||||||||||||    
T  5584113 tatccaaacataaatcaatt-acattaaactcacttttagtcaaaatcaattctgtcaaaatcaattctatcaaaatcaattct 5584031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 32599505 - 32599444
Alignment:
Q  68 cattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    ||||||||||| |||||| |||||| |||||||| ||| |||||||||||||||||||||||    
T  32599505 cattcaactcacttttaatcaaaatcaattctcttaaattcaattctatcaaaatcaattct 32599444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 15151543 - 15151487
Alignment:
Q  73 aactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||| || |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  15151543 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 15151487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 29399846 - 29399775
Alignment:
Q  57 aaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||| ||||||||| | | || |||||||| |||||| |||||||||||||||||||||||||||||    
T  29399846 aaatcaattc-cattcaacttactctttaccaaaatcaattctatcaaactcaattctatcaaaatcaattct 29399775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 16122088 - 16121985
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||| ||  |||  |||| |||||| ||||||| | ||| |||| ||| ||||||||||||| |||||| ||||| |||||| ||||||||||    
T  16122088 aagaatcacttatacataaaggtattcaaacacaaatcaacttacactcaaatcacttttaaccaaaatcaattctatcaaaatcaattttatcaaaatc 16121989  T
Q  124 aatt 127  Q
    ||||    
T  16121988 aatt 16121985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 128
Target Start/End: Original strand, 21455897 - 21455998
Alignment:
Q  25 agaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatca 124  Q
    ||||||||||||||| |||||||| |||||| || | | ||||||| ||||| | ||||||| ||||| ||||||  ||||||||||| |||||||||||    
T  21455897 agaatcacttttaat-aagtgtatacaaacacaattga-ttcacatccaacttacttttaactaaaatcaattcttacaaactcaattatatcaaaatca 21455994  T
Q  125 attc 128  Q
    ||||    
T  21455995 attc 21455998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 882776 - 882842
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaa 110  Q
    ||||||||||||||||||| || || ||||||||| ||||||| | ||| ||||| |||||||||||    
T  882776 tgtatccaaacataaatcattttaccttcaactcaattttaactagaatcaattcactcaaactcaa 882842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 129
Target Start/End: Original strand, 7215590 - 7215692
Alignment:
Q  25 agaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatca 124  Q
    ||||||||||||||| |||||||| ||||||||| | | ||||| | ||| ||| ||||||| ||||| || |||   |||||||||| |||||||||||    
T  7215590 agaatcacttttaat-aagtgtatacaaacataattga-ttcacgtccaattcacttttaactaaaatcaagtcttaaaaactcaattatatcaaaatca 7215687  T
Q  125 attct 129  Q
    |||||    
T  7215688 attct 7215692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 29682202 - 29682262
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaa 105  Q
    ||||||||||| ||||||||| |||  ||||||| ||||||||||||| |||||| |||||    
T  29682202 gtatccaaacacaaatcaatttacacgcaactcaattttaaccaaaatcaattctatcaaa 29682262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 3605814 - 3605736
Alignment:
Q  48 tccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||||||| ||  || |||||||| |||||| |||||| ||||||  |||| |||||| ||||||||||||||    
T  3605814 tccaaacataaatcacttttcactcaactcacttttaatcaaaatcaattct-acaaaatcaattatatcaaaatcaatt 3605736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 26274691 - 26274609
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||| |||||||||  |||| |||||||||||| |||||  || ||| |||| | ||||| |||||||||||||||||||||||    
T  26274691 tatctaaacataaacgaatt-acattcaactcacttttagtcagaatcaattatgtcaaaatcaattctatcaaaatcaattct 26274609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 1499975 - 1500072
Alignment:
Q  29 tcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||  ||| ||||| |||||||||||||||| ||| |||||||  ||||| ||||||| |||| |  |||| |||||||  ||||||||||||    
T  1499975 tcacttttacataaatgtattcaaacataaatcaatttacactcaactcgcttttagccaaaatcaatt-ttacaaaatcaattcagtcaaaatcaatt 1500072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 20846417 - 20846470
Alignment:
Q  44 tgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaatt 97  Q
    ||||| ||||||||||||| || |||||| ||||||||||||| |||| |||||    
T  20846417 tgtattcaaacataaatcattttacattctactcatttttaactaaaactaatt 20846470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 5456031 - 5456114
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattctt 130  Q
    ||||||||||||||| | || |||||||| ||| |||| | ||||||||||| | | ||| | ||||||||||||||| ||||||    
T  5456031 tatccaaacataaattattttacattcaattcactttttatcaaaattaattttat-aaaataaattctatcaaaatcgattctt 5456114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 253142 - 253247
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    ||||||||||||||| | |  ||||||||||||||||||||||| || |||||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  253142 aagaatcacttttaactgaaggtatccaaacataaatcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaattctatcaaaatc 253241  T
Q  124 aattct 129  Q
    ||||||    
T  253242 aattct 253247  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 219689 - 219769
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    ||||||||||||||||| ||  ||||||||||| |||||| |||||||| || | | ||| ||||||| | |||||||||||    
T  219689 tatccaaacataaatcacttttcattcaactcacttttaatcaaaattagttatgt-aaaatcaattcaaccaaaatcaatt 219769  T

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Target: scaffold0369 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 8466 - 8580
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||| ||||||  ||||||||||||||||||||||||||||||  |||||| ||||||||||||| |||| | ||||||||||||||||||||||||||    
T  8466 aatcatttttaaaaaagtgtatccaaacataaatcaattcacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatcaaaatcaat 8565  T
Q  127 tcttcctgccgccat 141  Q
    | ||||  |||||||    
T  8566 tattcccaccgccat 8580  T

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Target: scaffold0007 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 29209 - 29107
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||| |||| || | |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||    
T  29209 aagaataacttctattaaagtgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctttcaaacttaattctatcaaaatc 29111  T
Q  124 aatt 127  Q
    ||||    
T  29110 aatt 29107  T

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Target: scaffold0217 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 2111 - 2011
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    |||||||||||  | |||| ||||||||||||||||||||| ||  |||||||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  2111 aatcacttttatatgagtgcatccaaacataaatcaattcatatcaaactcattttgaaccaaaatcaattctttcaaactcaattctatcaaaatcaat 2012  T
Q  127 t 127  Q
    |    
T  2011 t 2011  T

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Target: scaffold0394 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 5882 - 5812
Alignment:
Q  59 atcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  5882 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattct 5812  T

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Target: scaffold0381 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 9125 - 9229
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||| || | |||||||||||||||| | ||||||| ||  |||||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  9125 aagaatcactttcaagtgagtgtatccaaacatata-caattcatatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatc 9223  T
Q  124 aattct 129  Q
    ||||||    
T  9224 aattct 9229  T

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Target: scaffold0983 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 127
Target Start/End: Complemental strand, 2349 - 2252
Alignment:
Q  30 cacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||  |||||| ||||||||||||||||||||| |  |||||| ||||||||||||| |||| | |||||||||||||| ||||||||||||    
T  2349 cacttttaaacaagtgtgtccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattatgtcaaactcaattctgtcaaaatcaatt 2252  T

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Target: scaffold0014 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 118497 - 118393
Alignment:
Q  24 aagaatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatc 123  Q
    |||||||||||||    ||||||||||||||||||||||||| ||||  |||||| ||||||| |||||  ||||| ||||||||||||| |||||||||    
T  118497 aagaatcacttttgtacaagtgtatccaaacataaatcaatttacatcaaactcacttttaacaaaaatctattctatcaaactcaattcgatcaaaatc 118398  T
Q  124 aattc 128  Q
    |||||    
T  118397 aattc 118393  T

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Target: scaffold0172 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 15323 - 15242
Alignment:
Q  45 gtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaatt 127  Q
    |||||||||||||||||| || | |||||||||| ||||||||||||| |||| |  |||| |||||||||||||||||||||    
T  15323 gtatccaaacataaatcactttatattcaactcacttttaaccaaaatcaatt-tgacaaaatcaattctatcaaaatcaatt 15242  T

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Target: scaffold0015 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 65536 - 65617
Alignment:
Q  46 tatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattc 128  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||| |||| || || | |||||||||||||||| |||||    
T  65536 tatccaaacataaatcactttacattaaactcatttttaaccaaaatcaatt-tcacagaatcaattctatcaaaattaattc 65617  T

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Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 38426 - 38369
Alignment:
Q  40 taagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaatt 97  Q
    ||||||||||||| |||||||||||| ||||| |||| | ||||||||||||||||||    
T  38426 taagtgtatccaatcataaatcaatttacatttaacttaattttaaccaaaattaatt 38369  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 46780 - 46879
Alignment:
Q  27 aatcacttttaattaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattctatcaaaatcaat 126  Q
    ||||||||||| || | | |||||||||||||| ||||| |  ||||||||| |||||  |||||| |||||| ||||| |||||| | |||||||||||    
T  46780 aatcacttttactttaatatatccaaacataaaccaattaag-ttcaactcacttttaggcaaaatcaattctatcaaaatcaattatgtcaaaatcaat 46878  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 301562 - 301630
Alignment:
Q  47 atccaaacataaatcaattcacattcaactcatttttaaccaaaattaattctctcaaactcaattcta 115  Q
    |||||||||||||| |||| | | |||||||| |||| |||||||| |||||  |||||||||||||||    
T  301562 atccaaacataaataaatttatactcaactcacttttgaccaaaatcaattcgatcaaactcaattcta 301630  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 138595 - 138521
Alignment:
Q  24 aagaatcacttttaa-ttaagtgtatccaaacataaatcaattcacattcaactcatttttaaccaaaattaattc 98  Q
    ||||||||||||||  ||||| ||||||||||||||||||||| |  |||| |||| ||||||| |||||||||||    
T  138595 aagaatcacttttatgttaag-gtatccaaacataaatcaatttatgttcagctcacttttaactaaaattaattc 138521  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 199431 - 199381
Alignment:
Q  49 ccaaacataaatcaattcacattcaactcatttttaaccaaaattaattct 99  Q
    |||||||||||||| || || ||||||||| ||||||||||||| ||||||    
T  199431 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattct 199381  T

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Target: scaffold0068 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 38372 - 38412
Alignment:
Q  89 aaattaattctctcaaactcaattctatcaaaatcaattct 129  Q
    |||| |||||||||||| |||||||| ||||||||||||||    
T  38372 aaatcaattctctcaaaatcaattctgtcaaaatcaattct 38412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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