View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13763_high_164 (Length: 240)
Name: NF13763_high_164
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13763_high_164 |
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Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 47517765 - 47517976
Alignment:
| Q |
18 |
catattaataatatttcttataaaaacaataggttatctaaccatgatactccatcaaaattaaaaattgatatgtgcagaaacaattatagag--agag |
115 |
Q |
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| T |
47517765 |
catattaataatatttcttataaaaacaataggttatctaaccatgatactccatcaaaattaaaaattgatatgtgcagaaacaattatagagagagag |
47517864 |
T |
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| Q |
116 |
aggacaccaaaaataatctaatgaaatattcacattacacagaatcaatatatttttctctcagaccatattaaatcgaagccaatattgcaagtgaaaa |
215 |
Q |
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| T |
47517865 |
aggacaccaaaaataatctaatgaaatattcacattacacagaatcaatatatttttctctcagaccatattaaatcgaagccaatattgcaagtgaaaa |
47517964 |
T |
|
| Q |
216 |
atagaaatccca |
227 |
Q |
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|||||||||||| |
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| T |
47517965 |
atagaaatccca |
47517976 |
T |
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