View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13763_high_191 (Length: 214)

Name: NF13763_high_191
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13763_high_191
NF13763_high_191
[»] chr6 (34 HSPs)
chr6 (1-196)||(31233584-31233780)
chr6 (1-196)||(9940646-9940838)
chr6 (1-105)||(32193700-32193804)
chr6 (1-110)||(24163759-24163869)
chr6 (1-196)||(577059-577252)
chr6 (9-81)||(12063585-12063657)
chr6 (1-121)||(18737125-18737245)
chr6 (1-80)||(29399944-29400023)
chr6 (1-74)||(10520721-10520794)
chr6 (1-81)||(234032-234112)
chr6 (1-104)||(4850547-4850650)
chr6 (8-196)||(12459281-12459466)
chr6 (2-196)||(13503806-13504002)
chr6 (4-81)||(24556003-24556080)
chr6 (8-74)||(8030647-8030713)
chr6 (7-196)||(13011310-13011495)
chr6 (18-121)||(3988781-3988881)
chr6 (8-81)||(19674985-19675058)
chr6 (8-81)||(29713481-29713554)
chr6 (9-192)||(17552213-17552392)
chr6 (8-103)||(12322939-12323032)
chr6 (37-106)||(1134959-1135029)
chr6 (1-74)||(21272184-21272257)
chr6 (1-74)||(23259407-23259480)
chr6 (1-81)||(31443520-31443601)
chr6 (20-74)||(34513685-34513739)
chr6 (1-74)||(10540591-10540663)
chr6 (1-61)||(17828294-17828354)
chr6 (2-61)||(1502834-1502893)
chr6 (4-74)||(12588527-12588595)
chr6 (1-64)||(32429282-32429345)
chr6 (165-196)||(32619787-32619818)
chr6 (134-196)||(12588653-12588715)
chr6 (30-74)||(17267689-17267733)
[»] chr4 (70 HSPs)
chr4 (1-196)||(30261257-30261449)
chr4 (1-196)||(47817736-47817929)
chr4 (1-121)||(45043629-45043747)
chr4 (1-121)||(8971040-8971158)
chr4 (1-81)||(20448037-20448117)
chr4 (1-81)||(40345426-40345506)
chr4 (1-74)||(52848140-52848213)
chr4 (1-81)||(1819560-1819640)
chr4 (1-81)||(19878646-19878726)
chr4 (1-104)||(22220415-22220518)
chr4 (1-192)||(10573125-10573313)
chr4 (1-79)||(19451292-19451370)
chr4 (1-74)||(52957876-52957949)
chr4 (1-81)||(2493100-2493180)
chr4 (14-106)||(25123780-25123872)
chr4 (4-196)||(6991229-6991417)
chr4 (4-74)||(34316223-34316293)
chr4 (1-79)||(54042264-54042342)
chr4 (1-196)||(34413513-34413706)
chr4 (8-73)||(39982108-39982173)
chr4 (1-106)||(41496203-41496308)
chr4 (1-74)||(44571951-44572024)
chr4 (4-121)||(52162107-52162219)
chr4 (1-68)||(4505335-4505402)
chr4 (1-121)||(50203074-50203189)
chr4 (1-104)||(51733550-51733653)
chr4 (1-106)||(19930712-19930818)
chr4 (6-104)||(21864439-21864537)
chr4 (6-104)||(21920300-21920398)
chr4 (1-106)||(11364224-11364329)
chr4 (1-74)||(31917954-31918027)
chr4 (1-106)||(37624554-37624659)
chr4 (1-74)||(49080563-49080635)
chr4 (8-80)||(7906076-7906148)
chr4 (1-81)||(24940877-24940957)
chr4 (4-106)||(29370604-29370708)
chr4 (1-81)||(37654408-37654487)
chr4 (2-121)||(45839636-45839753)
chr4 (1-68)||(25231173-25231240)
chr4 (1-104)||(52915598-52915701)
chr4 (2-196)||(56460082-56460276)
chr4 (4-81)||(18429991-18430067)
chr4 (1-81)||(40010952-40011033)
chr4 (1-74)||(41920395-41920468)
chr4 (8-105)||(44650893-44650990)
chr4 (1-74)||(50623081-50623154)
chr4 (1-81)||(29519604-29519684)
chr4 (6-111)||(620226-620332)
chr4 (1-74)||(27943631-27943705)
chr4 (26-104)||(38510301-38510379)
chr4 (4-74)||(46392147-46392217)
chr4 (1-74)||(52253843-52253919)
chr4 (4-74)||(56373663-56373733)
chr4 (8-81)||(2728477-2728550)
chr4 (1-74)||(49089462-49089534)
chr4 (8-81)||(53814576-53814649)
chr4 (4-106)||(44868305-44868401)
chr4 (1-66)||(44061006-44061071)
chr4 (1-81)||(47458464-47458544)
chr4 (1-81)||(24157183-24157263)
chr4 (1-121)||(27653674-27653790)
chr4 (1-45)||(28734596-28734640)
chr4 (1-45)||(33033076-33033120)
chr4 (53-99)||(18053033-18053079)
chr4 (28-74)||(30780218-30780264)
chr4 (1-67)||(40837128-40837193)
chr4 (9-81)||(47774865-47774938)
chr4 (8-57)||(50621290-50621339)
chr4 (1-30)||(56555832-56555861)
chr4 (168-196)||(18052654-18052682)
[»] chr1 (69 HSPs)
chr1 (1-196)||(29567894-29568086)
chr1 (2-196)||(26595030-26595221)
chr1 (22-196)||(25560833-25561004)
chr1 (1-120)||(46554796-46554912)
chr1 (1-81)||(15823032-15823112)
chr1 (4-104)||(25487089-25487189)
chr1 (1-104)||(34047285-34047388)
chr1 (8-81)||(10842785-10842858)
chr1 (1-106)||(12591130-12591235)
chr1 (38-196)||(31699250-31699405)
chr1 (8-81)||(40717369-40717442)
chr1 (1-81)||(9915441-9915521)
chr1 (1-121)||(15573605-15573729)
chr1 (1-73)||(44258588-44258660)
chr1 (1-81)||(49468784-49468864)
chr1 (1-104)||(50249308-50249411)
chr1 (1-121)||(44108597-44108717)
chr1 (1-74)||(44557124-44557197)
chr1 (8-81)||(50094234-50094307)
chr1 (8-104)||(27720963-27721059)
chr1 (1-81)||(32807011-32807091)
chr1 (1-81)||(38531370-38531450)
chr1 (1-80)||(26352155-26352234)
chr1 (1-80)||(34032154-34032233)
chr1 (1-120)||(1740676-1740794)
chr1 (1-78)||(13408341-13408418)
chr1 (1-106)||(16757242-16757347)
chr1 (9-74)||(25151821-25151886)
chr1 (1-81)||(35848006-35848086)
chr1 (1-81)||(48025327-48025407)
chr1 (1-121)||(5463573-5463691)
chr1 (9-68)||(14593406-14593465)
chr1 (9-185)||(27208995-27209168)
chr1 (6-81)||(46286891-46286966)
chr1 (1-196)||(7191167-7191360)
chr1 (1-106)||(39477756-39477860)
chr1 (1-74)||(52706880-52706952)
chr1 (1-81)||(31491843-31491923)
chr1 (1-81)||(43358273-43358353)
chr1 (18-74)||(43759347-43759403)
chr1 (1-81)||(46045971-46046051)
chr1 (1-81)||(48009008-48009088)
chr1 (1-112)||(2610872-2610983)
chr1 (8-121)||(24611554-24611666)
chr1 (1-121)||(26755218-26755335)
chr1 (2-119)||(49900794-49900910)
chr1 (1-80)||(52024308-52024387)
chr1 (1-103)||(18794593-18794694)
chr1 (4-82)||(24884416-24884494)
chr1 (9-74)||(52125216-52125281)
chr1 (2-81)||(49426488-49426565)
chr1 (11-74)||(34110535-34110598)
chr1 (1-74)||(30292938-30293011)
chr1 (4-196)||(8894976-8895165)
chr1 (4-74)||(14373493-14373563)
chr1 (134-196)||(16757159-16757221)
chr1 (1-121)||(31798587-31798706)
chr1 (3-81)||(46271390-46271468)
chr1 (2-81)||(7214109-7214185)
chr1 (4-65)||(33622454-33622515)
chr1 (1-65)||(24483386-24483450)
chr1 (22-74)||(52066369-52066420)
chr1 (1-104)||(12484678-12484781)
chr1 (1-44)||(38947653-38947696)
chr1 (2-73)||(39125647-39125718)
chr1 (1-104)||(41857311-41857415)
chr1 (136-192)||(44557034-44557090)
chr1 (22-74)||(49402951-49403003)
chr1 (2-98)||(51244893-51244988)
[»] chr8 (46 HSPs)
chr8 (1-121)||(39463257-39463374)
chr8 (8-111)||(5295451-5295554)
chr8 (1-104)||(15160498-15160601)
chr8 (1-104)||(40362433-40362536)
chr8 (4-81)||(43084702-43084779)
chr8 (1-81)||(4760633-4760713)
chr8 (1-81)||(39698741-39698821)
chr8 (4-74)||(514875-514945)
chr8 (1-121)||(6374412-6374528)
chr8 (1-121)||(17920954-17921073)
chr8 (1-74)||(31693703-31693776)
chr8 (1-121)||(15227565-15227685)
chr8 (5-121)||(29312228-29312344)
chr8 (4-121)||(34156535-34156650)
chr8 (9-121)||(19438242-19438353)
chr8 (1-74)||(4989476-4989549)
chr8 (1-74)||(9304715-9304788)
chr8 (1-74)||(40228572-40228645)
chr8 (1-97)||(6116064-6116160)
chr8 (1-201)||(14234173-14234373)
chr8 (1-81)||(43448714-43448794)
chr8 (6-105)||(36921360-36921459)
chr8 (1-80)||(37559609-37559688)
chr8 (1-104)||(39765912-39766014)
chr8 (1-121)||(45358932-45359049)
chr8 (8-196)||(13496240-13496428)
chr8 (54-196)||(15750292-15750435)
chr8 (1-81)||(9880576-9880656)
chr8 (1-81)||(29025821-29025901)
chr8 (1-121)||(7839456-7839574)
chr8 (1-72)||(9812171-9812242)
chr8 (9-74)||(31899330-31899395)
chr8 (1-113)||(34796723-34796833)
chr8 (1-74)||(44713532-44713605)
chr8 (1-68)||(396301-396369)
chr8 (4-101)||(12339712-12339810)
chr8 (9-121)||(19574392-19574503)
chr8 (1-104)||(43724379-43724483)
chr8 (36-121)||(13367986-13368068)
chr8 (8-74)||(35356312-35356378)
chr8 (6-66)||(40400066-40400126)
chr8 (2-66)||(40400441-40400505)
chr8 (1-80)||(17655906-17655984)
chr8 (5-46)||(43561341-43561382)
chr8 (8-61)||(43974886-43974939)
chr8 (134-196)||(40399840-40399902)
[»] chr7 (57 HSPs)
chr7 (1-121)||(24133166-24133283)
chr7 (1-120)||(1031153-1031269)
chr7 (4-106)||(10476137-10476239)
chr7 (8-192)||(28289220-28289401)
chr7 (1-121)||(48843550-48843668)
chr7 (1-81)||(19105074-19105154)
chr7 (1-104)||(42285906-42286009)
chr7 (4-106)||(30312459-30312561)
chr7 (1-74)||(27947581-27947654)
chr7 (1-74)||(29531015-29531088)
chr7 (8-81)||(37490789-37490862)
chr7 (1-106)||(40753476-40753581)
chr7 (1-81)||(1741989-1742069)
chr7 (1-81)||(13405200-13405280)
chr7 (1-101)||(34012159-34012259)
chr7 (1-81)||(42880007-42880087)
chr7 (1-81)||(45948703-45948783)
chr7 (1-80)||(715937-716016)
chr7 (1-106)||(8603973-8604078)
chr7 (4-104)||(31929910-31930010)
chr7 (1-81)||(41137726-41137806)
chr7 (1-104)||(34274792-34274895)
chr7 (1-196)||(40339457-40339649)
chr7 (1-104)||(44567091-44567194)
chr7 (1-81)||(45933661-45933737)
chr7 (1-196)||(45499784-45499980)
chr7 (5-196)||(6563379-6563563)
chr7 (1-74)||(24680126-24680199)
chr7 (1-81)||(22297994-22298074)
chr7 (4-104)||(25440873-25440973)
chr7 (8-104)||(37502324-37502420)
chr7 (1-104)||(12977736-12977839)
chr7 (1-121)||(27935765-27935883)
chr7 (1-192)||(21819282-21819469)
chr7 (4-81)||(44453136-44453213)
chr7 (8-81)||(48684728-48684801)
chr7 (1-81)||(31418586-31418666)
chr7 (1-81)||(37815722-37815802)
chr7 (1-104)||(6747225-6747327)
chr7 (2-65)||(10599212-10599275)
chr7 (1-121)||(33939769-33939887)
chr7 (1-81)||(23935420-23935499)
chr7 (1-104)||(18292333-18292436)
chr7 (1-121)||(35777817-35777935)
chr7 (1-106)||(2297036-2297146)
chr7 (8-104)||(18270582-18270679)
chr7 (17-98)||(33682543-33682624)
chr7 (1-74)||(36807933-36808006)
chr7 (4-61)||(39557323-39557380)
chr7 (1-61)||(24780399-24780459)
chr7 (8-74)||(21752191-21752257)
chr7 (1-66)||(42753706-42753771)
chr7 (1-45)||(32501858-32501902)
chr7 (1-106)||(4268609-4268715)
chr7 (134-196)||(34012585-34012647)
chr7 (3-45)||(40927163-40927205)
chr7 (8-121)||(29636262-29636373)
[»] chr5 (53 HSPs)
chr5 (7-192)||(34534364-34534545)
chr5 (4-80)||(3306085-3306161)
chr5 (1-81)||(26660753-26660833)
chr5 (1-81)||(26932346-26932426)
chr5 (4-192)||(27797782-27797962)
chr5 (1-74)||(39566181-39566254)
chr5 (1-81)||(6518974-6519054)
chr5 (1-81)||(13761555-13761635)
chr5 (1-81)||(34446102-34446182)
chr5 (1-104)||(10344984-10345087)
chr5 (4-120)||(36164888-36165001)
chr5 (2-121)||(15167049-15167164)
chr5 (4-104)||(4630866-4630966)
chr5 (1-81)||(42104138-42104218)
chr5 (1-104)||(43584428-43584532)
chr5 (1-80)||(7317026-7317105)
chr5 (1-74)||(2729868-2729941)
chr5 (1-74)||(7579951-7580024)
chr5 (1-74)||(21319392-21319465)
chr5 (1-81)||(21375726-21375806)
chr5 (1-80)||(3025007-3025086)
chr5 (8-196)||(11977593-11977778)
chr5 (8-99)||(21195384-21195475)
chr5 (1-118)||(39504720-39504838)
chr5 (8-74)||(14620576-14620642)
chr5 (8-120)||(8336445-8336557)
chr5 (1-74)||(9066505-9066578)
chr5 (1-65)||(24280991-24281055)
chr5 (1-65)||(24381157-24381221)
chr5 (8-80)||(35765976-35766048)
chr5 (1-121)||(34208930-34209052)
chr5 (4-196)||(13974278-13974464)
chr5 (4-81)||(42662015-42662091)
chr5 (1-81)||(27600397-27600477)
chr5 (1-121)||(14161938-14162056)
chr5 (1-104)||(25362852-25362955)
chr5 (2-80)||(38362213-38362291)
chr5 (1-111)||(38369871-38369980)
chr5 (1-121)||(4424975-4425090)
chr5 (4-111)||(29807359-29807469)
chr5 (2-45)||(42978177-42978220)
chr5 (4-106)||(24281098-24281199)
chr5 (4-106)||(24381012-24381113)
chr5 (9-83)||(36073703-36073777)
chr5 (1-73)||(4911233-4911305)
chr5 (16-74)||(891095-891154)
chr5 (4-74)||(40776657-40776728)
chr5 (4-74)||(25768515-25768584)
chr5 (39-81)||(39335279-39335321)
chr5 (8-61)||(39729964-39730017)
chr5 (35-121)||(1309396-1309479)
chr5 (1-73)||(7721094-7721165)
chr5 (1-45)||(31041925-31041969)
[»] chr2 (61 HSPs)
chr2 (1-121)||(18579165-18579282)
chr2 (1-196)||(37038732-37038921)
chr2 (1-121)||(18719470-18719587)
chr2 (9-98)||(27964428-27964517)
chr2 (1-106)||(29411694-29411799)
chr2 (1-81)||(441306-441386)
chr2 (1-121)||(4658269-4658388)
chr2 (1-81)||(38926604-38926684)
chr2 (1-121)||(12342091-12342209)
chr2 (1-80)||(45301763-45301842)
chr2 (1-121)||(8540036-8540154)
chr2 (1-106)||(36685790-36685895)
chr2 (1-106)||(43427337-43427442)
chr2 (8-104)||(16463084-16463180)
chr2 (10-74)||(45081982-45082046)
chr2 (2-104)||(5717512-5717613)
chr2 (1-79)||(16807594-16807672)
chr2 (1-79)||(16846875-16846953)
chr2 (1-71)||(29808810-29808880)
chr2 (1-74)||(4469499-4469572)
chr2 (1-74)||(12566062-12566135)
chr2 (1-74)||(34546413-34546486)
chr2 (1-74)||(43971502-43971575)
chr2 (1-81)||(32228086-32228166)
chr2 (1-104)||(22620386-22620489)
chr2 (1-71)||(4133022-4133092)
chr2 (1-71)||(10195572-10195642)
chr2 (1-81)||(4051778-4051859)
chr2 (1-74)||(6220486-6220559)
chr2 (1-106)||(7028862-7028967)
chr2 (1-74)||(13561992-13562065)
chr2 (1-74)||(29396762-29396835)
chr2 (1-74)||(36177974-36178047)
chr2 (6-74)||(7644649-7644717)
chr2 (3-121)||(30855105-30855221)
chr2 (1-104)||(17695877-17695980)
chr2 (4-74)||(42004892-42004962)
chr2 (1-66)||(25383574-25383639)
chr2 (1-74)||(33482311-33482384)
chr2 (1-81)||(4288786-4288866)
chr2 (1-104)||(28072565-28072671)
chr2 (8-63)||(9391651-9391706)
chr2 (8-103)||(11188545-11188640)
chr2 (1-64)||(16792481-16792544)
chr2 (1-64)||(17703017-17703080)
chr2 (1-104)||(35799201-35799303)
chr2 (1-74)||(12394003-12394076)
chr2 (8-196)||(19164362-19164544)
chr2 (4-80)||(7874720-7874795)
chr2 (13-81)||(15083227-15083295)
chr2 (8-79)||(14285943-14286014)
chr2 (18-121)||(1423206-1423307)
chr2 (1-103)||(7042239-7042341)
chr2 (1-104)||(27986034-27986139)
chr2 (1-106)||(777768-777878)
chr2 (1-54)||(14833837-14833890)
chr2 (1-74)||(35046516-35046589)
chr2 (3-104)||(45423618-45423719)
chr2 (4-38)||(34035865-34035899)
chr2 (1-46)||(9366229-9366274)
chr2 (1-121)||(43480907-43481026)
[»] chr3 (56 HSPs)
chr3 (1-81)||(3152878-3152958)
chr3 (1-81)||(39356883-39356963)
chr3 (1-80)||(50038244-50038323)
chr3 (1-196)||(36844702-36844894)
chr3 (1-196)||(30315307-30315500)
chr3 (1-81)||(45213794-45213874)
chr3 (8-106)||(30431125-30431224)
chr3 (1-104)||(31583483-31583586)
chr3 (1-196)||(48903284-48903476)
chr3 (1-121)||(47137961-47138081)
chr3 (1-81)||(11019898-11019978)
chr3 (1-106)||(30934856-30934958)
chr3 (1-104)||(42571578-42571681)
chr3 (1-121)||(51398008-51398126)
chr3 (1-99)||(4392194-4392292)
chr3 (4-106)||(9189482-9189584)
chr3 (1-79)||(11393543-11393621)
chr3 (1-120)||(22857088-22857204)
chr3 (2-121)||(38140949-38141065)
chr3 (1-74)||(41850388-41850461)
chr3 (1-120)||(48901718-48901834)
chr3 (1-81)||(30426396-30426476)
chr3 (2-74)||(36460805-36460877)
chr3 (1-81)||(38016373-38016452)
chr3 (1-81)||(47895416-47895496)
chr3 (1-81)||(50088388-50088468)
chr3 (1-65)||(53200768-53200832)
chr3 (1-80)||(4758989-4759068)
chr3 (1-80)||(32492254-32492333)
chr3 (1-80)||(44676219-44676298)
chr3 (1-121)||(2458005-2458124)
chr3 (8-74)||(36729889-36729955)
chr3 (1-74)||(33194110-33194183)
chr3 (1-74)||(35557837-35557910)
chr3 (1-106)||(50646157-50646262)
chr3 (1-121)||(19373584-19373701)
chr3 (8-106)||(40487833-40487931)
chr3 (1-196)||(42071983-42072175)
chr3 (1-121)||(50346624-50346740)
chr3 (1-121)||(47823482-47823603)
chr3 (1-81)||(31853634-31853714)
chr3 (1-104)||(19115385-19115487)
chr3 (4-74)||(33024379-33024449)
chr3 (1-74)||(41287575-41287651)
chr3 (3-81)||(38363785-38363869)
chr3 (2-81)||(7230968-7231047)
chr3 (35-81)||(27067640-27067686)
chr3 (2-66)||(8817139-8817202)
chr3 (1-81)||(23525388-23525468)
chr3 (1-104)||(42886749-42886850)
chr3 (1-68)||(26121792-26121859)
chr3 (9-59)||(52654310-52654360)
chr3 (4-74)||(54403343-54403413)
chr3 (1-38)||(51058267-51058304)
chr3 (168-196)||(4392643-4392671)
chr3 (41-81)||(24357466-24357506)
[»] scaffold0332 (1 HSPs)
scaffold0332 (1-104)||(3862-3965)
[»] scaffold2107 (1 HSPs)
scaffold2107 (4-80)||(589-665)
[»] scaffold0565 (2 HSPs)
scaffold0565 (1-81)||(9716-9796)
scaffold0565 (1-106)||(10004-10110)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-81)||(24815-24895)
[»] scaffold0015 (1 HSPs)
scaffold0015 (4-81)||(21156-21233)
[»] scaffold0502 (1 HSPs)
scaffold0502 (4-106)||(621-723)
[»] scaffold0300 (1 HSPs)
scaffold0300 (8-105)||(4570-4667)
[»] scaffold0294 (1 HSPs)
scaffold0294 (8-81)||(3579-3652)
[»] scaffold0026 (1 HSPs)
scaffold0026 (4-103)||(4141-4241)
[»] scaffold0182 (1 HSPs)
scaffold0182 (8-74)||(18336-18402)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-121)||(1449-1568)
[»] scaffold0983 (1 HSPs)
scaffold0983 (1-74)||(768-841)
[»] scaffold0048 (1 HSPs)
scaffold0048 (1-74)||(62631-62704)
[»] scaffold0136 (1 HSPs)
scaffold0136 (28-74)||(9470-9516)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-45)||(75410-75454)
[»] scaffold0010 (1 HSPs)
scaffold0010 (8-72)||(153318-153382)


Alignment Details
Target: chr6 (Bit Score: 162; Significance: 1e-86; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 31233780 - 31233584
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31233780 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 31233681  T
Q  101 attattattttttctttaatg-nnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    |||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31233680 attattattttttctttaatgaaaaaaaaaaccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 31233584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 9940646 - 9940838
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||||| |||||||||||||||||| |||||||||||  |||  |||||||||||||||||||||| ||| || ||| |||||||||||||     
T  9940646 ttgttttaaaatgattgtcactttcagttttcaatgcaataataacttttctttttcaattgtacccttcaattaatattatacacactacttccaaaa- 9940744  T
Q  101 attattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
      |||||||||||||||||||         || ||||||||||  ||||| |||||| ||||  || ||||||||||||| || ||| ||||||||    
T  9940745 --tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacatctctctttcttttagttgatgcatttctta 9940838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 32193700 - 32193804
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||| ||||||||||| |||||  | |||||||||||| ||||||||||||||||||||||||||| |||||| | | |||||||||||| |    
T  32193700 ttgttttaaaataaatgtcacttttagtttctaatgcaataataattttttcttttcaattgtacccttcaattaatactatatacactacttccaaagt 32193799  T
Q  101 attat 105  Q
    |||||    
T  32193800 attat 32193804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 24163869 - 24163759
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||  ||||||| ||||||    | ||||||||||||     
T  24163869 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacatttcaattaatactatgttacactacttccaaag 24163770  T
Q  100 tattattattt 110  Q
    |||||||||||    
T  24163769 tattattattt 24163759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 577059 - 577252
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||| | | |||||||||||||||| |||||||||||  || || |||||||| |||||||||||| ||| || | | |||||||||||| |    
T  577059 ttgttttaaaataactatcactttcagttttcaatgcaataataactttatcatttcaattatacccttcaattaatattatatacactacttccaaatt 577158  T
Q  101 attattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    |||||  ||||||||||||||         || ||||||||||  ||||| || ||| ||||  |||||||||| |||||||||||| ||||||||    
T  577159 attat--ttttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaataacatttctctttattttaattaatgcatttctta 577252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 12063657 - 12063585
Alignment:
Q  9 aaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||||||| || |||||||||||| |||| |||||||||||||||||||||||||||||    
T  12063657 aaatgaatgtcactttcagtttccaatgcaataataatttttttttttcaattgtacccttcaattgatacta 12063585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 18737245 - 18737125
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||||||||||||||||||||| || |||||||||||   ||||||||||||| ||||||| |||| ||| || | | |||||||  ||| |    
T  18737245 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactctttcttttcaattataccctttaattaatattatatacactacttttaaagt 18737146  T
Q  101 attattattttttctttaatg 121  Q
    | |||||||||||||||||||    
T  18737145 actattattttttctttaatg 18737125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29399944 - 29400023
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    |||||| ||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| ||||| |||||    
T  29399944 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctccaattaatact 29400023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 10520794 - 10520721
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||| ||||||||||||| |||||| | |||||||||| |||||||||||||||||||||||||||    
T  10520794 ttgttttaaaataaatgtcactttcaattttcaatacaataataattttttcttttcaattgtacccttcaatt 10520721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 234032 - 234112
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||| ||||| || |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  234032 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatacta 234112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 4850650 - 4850547
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||||||||| ||| || |||||||||||  ||||||||||||||||||| | ||||| |||||   || ||||||||||||||    
T  4850650 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtaccatccaattaatactctgcacactacttccaaaat 4850551  T
Q  101 atta 104  Q
    ||||    
T  4850550 atta 4850547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 12459466 - 12459281
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattatta 107  Q
    |||||||||||||||||| ||||  | | ||||||||   |||||||||||||| |||||||||||| |||||| | | | |||||||||   | ||||     
T  12459466 aaaatgaatgtcactttcggtttctaatacaataatatctttttcttttcaattatacccttcaattaatactatatacattacttccaa---agtattg 12459370  T
Q  108 ttttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    ||||||||||||||         || ||||||||||  ||||| |||||| |||| ||| | |||||||||||||||||||||||||||    
T  12459369 ttttttctttaatgaaaaacagaccaatagttgattaggataatttggtaaaataatatctttctttcttttaattaatgtatttctta 12459281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 13504002 - 13503806
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataa--tattttcttttcaattgtacccttcaattgatac--taaacaaactacttccaa 97  Q
    ||||| ||||||||||||||||||||||| || |||||||||||  | ||||  ||||||||||||||||||||| ||||  || | | ||||||| |||    
T  13504002 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttttttatttcaattgtacccttcaattaatactatatatacactactttcaa 13503903  T
Q  98 aatattattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    | ||||||| ||||||||||||||          | |||||| |||  ||||| |||||| ||||  ||||||||||||||||||||||| ||||||||    
T  13503902 agtattatt-ttttttctttaatgaaaaacaaa-caatagtttattaggataatttggtaaaataacatttctctttcttttaattaatgcatttctta 13503806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 24556080 - 24556003
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||| ||||||| |||||||||||| || ||||||||| |||||||||||||||||| |||||||| ||||||    
T  24556080 ttttaaaataaatgtcattttcagttttcaatgtaataataattttttcttttcaattgtactcttcaattaatacta 24556003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 8030647 - 8030713
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||| |||||||||||||| || ||||||||| |||||||||||| ||||||||||||||    
T  8030647 aaaatgaatgttactttcagttttcaatgtaataataattttttcttttcaactgtacccttcaatt 8030713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 13011495 - 13011310
Alignment:
Q  7 taaaatgaatgtcactttcagttttcattgcaataataatat--tttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatta 104  Q
    |||||| |||||||| ||||||||||| | ||||||||||||  ||| |||| |||| |||| ||||||| |||||| | | ||||||| |||| ||||     
T  13011495 taaaataaatgtcacgttcagttttcaatacaataataatatattttttttttaattttaccgttcaattaatactatatacactactttcaaagtatt- 13011397  T
Q  105 ttattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
         ||||||||||||         ||||||||||||| |||||| |||||| ||||  || |||||||||||||||||||| ||||||||    
T  13011396 -----ttttctttaatgaaaaacaaaccgatagttgattaagataatttggtaaaataacatctctctttcttttaattaatgcatttctta 13011310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 3988881 - 3988781
Alignment:
Q  18 tcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattattattttttcttt 117  Q
    ||||||||||||| || |||||||||||| |||||||||||||| |||||||||||| |||||| | | |||| |||   || | |||||||||||||||    
T  3988881 tcactttcagtttccaatgcaataataattttttcttttcaattatacccttcaattaatactatatatactatttc---aaaagtattattttttcttt 3988785  T
Q  118 aatg 121  Q
    ||||    
T  3988784 aatg 3988781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 19674985 - 19675058
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||||| ||||||||| || |||||||||||  ||||||||||||||||||| ||||||| ||||||    
T  19674985 aaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccattcaattaatacta 19675058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 29713554 - 29713481
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||||| |||| |||| || |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  29713554 aaaatgaatgtcattttccgtttccaatgcaataataactttttcttttcaattgtacccttcaattaatacta 29713481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 17552392 - 17552213
Alignment:
Q  9 aaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattattat 108  Q
    |||||||||||| ||||||||| || |||||||||| | ||||  |||||||||||   || |||| |||||| | | |||||||||||||||||||  |    
T  17552392 aaatgaatgtcattttcagtttccaatgcaataatattttttt--tttcaattgtaatttttaattaatactatatacactacttccaaaatattat--t 17552297  T
Q  109 tttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtattt 192  Q
    |||||||||||||         || || |||||||  ||||| |||||| |||   || |||||||||||||||||||||||||    
T  17552296 tttttctttaatgaaaaacaaaccaattgttgattaggataatttggtaaaattacatctctctttcttttaattaatgtattt 17552213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 12323032 - 12322939
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    ||||||||||||||||||||||| || ||||||||||   ||||  ||||||||| ||||||||||| |||||| | | |||||||||||| ||||    
T  12323032 aaaatgaatgtcactttcagtttccaatgcaataata--ttttttatttcaattgcacccttcaattaatactatatacactacttccaaagtatt 12322939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 1134959 - 1135029
Alignment:
Q  37 caataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaatattatt 106  Q
    |||||||||  ||||||||||||||||||||||||||| |||||| |  | ||||||||||||||||||||    
T  1134959 caataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaaatattatt 1135029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21272257 - 21272184
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||||||| ||||||||||||| || || |||||||| |||||||||| ||| ||||  |||||||    
T  21272257 ttgttttaaaatgaatatcactttcagtttccaatgtaataataacattttctttttaatcgtacatttcaatt 21272184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 23259480 - 23259407
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| ||||||||||||| ||||||||| || ||||| |||||  ||| |||||||||||||||||| ||||    
T  23259480 ttgtttcaaaatgaatgtcattttcagtttccaatgcaaaaataacttttacttttcaattgtacccttaaatt 23259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31443601 - 31443520
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataa-tattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||| | ||||||||| || ||||||||||| | |||| |||||||||||||| ||||||| ||||||    
T  31443601 ttgtttaaaaatgaatgttattttcagtttccaatgcaataataactttttttttttcaattgtacctttcaattaatacta 31443520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 34513739 - 34513685
Alignment:
Q  20 actttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||| || |||||||||||  ||||||||||||||||| |||||||||    
T  34513739 actttcagtttccaatgcaataataactttttcttttcaattgtatccttcaatt 34513685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 10540663 - 10540591
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| ||||| ||||||||||||| ||| || |||||||||||  ||||  |||||||||||||||||||||    
T  10540663 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataacctttt-gtttcaattgtacccttcaatt 10540591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17828294 - 17828354
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaatt 61  Q
    |||||||||||||||||| | ||| ||| |||| || ||||||||| ||||||||||||||    
T  17828294 ttgttttaaaatgaatgttattttaagtattcaatgtaataataattttttcttttcaatt 17828354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 1502893 - 1502834
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaatt 61  Q
    ||||||||||| ||||||| ||||||||| || ||||||| ||||  |||||||||||||    
T  1502893 tgttttaaaattaatgtcattttcagtttccaatgcaatagtaattatttcttttcaatt 1502834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 12588527 - 12588595
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||||| ||||||||||| || ||||||||||  | ||| ||||| ||| ||||||||||||    
T  12588527 ttttaaaatgaatgttactttcagtttgcaatgcaataata--acttttttttctattatacccttcaatt 12588595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 32429282 - 32429345
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgta 64  Q
    |||||| |||| |||||||||||| | ||| || |||||||||||  |||||||||||||||||    
T  32429282 ttgtttcaaaacgaatgtcacttttaatttccaatgcaataataactttttcttttcaattgta 32429345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 196
Target Start/End: Complemental strand, 32619818 - 32619787
Alignment:
Q  165 atttctctttcttttaattaatgtatttctta 196  Q
    ||||||||||||||||||||||||||||||||    
T  32619818 atttctctttcttttaattaatgtatttctta 32619787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 12588653 - 12588715
Alignment:
Q  134 atagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    ||||||| || |||||| |||||| ||||  || |||||||||||||||||||| ||||||||    
T  12588653 atagttggttaagataatttggtaaaataaaatctctctttcttttaattaatgcatttctta 12588715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 17267733 - 17267689
Alignment:
Q  30 ttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||| |||||||||||| |||||||||||| ||||||||| ||||    
T  17267733 ttcaatgcaataataattttttcttttcaactgtaccctttaatt 17267689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 30261257 - 30261449
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| |||||| | | | ||||| |||       
T  30261257 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatgttttcttttcaattgtacccttcaattaatactatatacattactttcaa--- 30261353  T
Q  101 attattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    | |||||||||||||||||||         || |||||||||| | |||| |||||| ||||  || ||||||||||| |||||||||||||||||    
T  30261354 agtattattttttctttaatgaaaaacaaaccaatagttgattaaaataatttggtaaaataacatctctctttctttaaattaatgtatttctta 30261449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 47817736 - 47817929
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||| | ||||||||||| || |||||||||||  ||||||||||||||||||||||||||| |||||| | | |||||||||||| |    
T  47817736 ttgtttcaaaatgaatttaactttcagtttgcaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactacttccaaagt 47817835  T
Q  101 attattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    |||||  ||||||||||||||         || ||||||||||  ||||| |||||| ||||  || |||||||||||||||||||| ||||||||    
T  47817836 attat--ttttttctttaatgaaaaacaaaccaatagttgattatgataaattggtaaaataacatctctctttcttttaattaatgcatttctta 47817929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 45043747 - 45043629
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||    | |||||||||||||    
T  45043747 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaa 45043648  T
Q  100 tattattattttttctttaatg 121  Q
       |||||||||||||||||||    
T  45043647 ---tattattttttctttaatg 45043629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 8971040 - 8971158
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||||||||||  ||||||||||||||||| || ||||||||| |||||||||||||||||| |||||||| ||| || | | |||||||||||| |    
T  8971040 ttgttttaaaatgaccgtcactttcagttttcaatgaaataataattttttcttttcaattgtactcttcaattaataatatatacactacttccaaagt 8971139  T
Q  101 attattattttttctttaatg 121  Q
    |||||  ||||||||||||||    
T  8971140 attat--ttttttctttaatg 8971158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 20448037 - 20448117
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  20448037 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattatacccttcaattaatacta 20448117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40345506 - 40345426
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  40345506 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatacta 40345426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 52848213 - 52848140
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||||||||||||||||| ||| || |||||||||||| |||||||||||||||||||||||||||    
T  52848213 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataattttttcttttcaattgtacccttcaatt 52848140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1819560 - 1819640
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  1819560 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaatttttcttttcaattgtacccttcaattaatacta 1819640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19878646 - 19878726
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  19878646 ttgtttgaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaatttatacta 19878726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 22220518 - 22220415
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||| ||||||| ||||| |||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||  || ||||||||||||||    
T  22220518 ttgtttcaaaataaatgtcattttcaattttcaatgcaataataactttttcttttcaattgtaccctccaattaatactatgcacactacttccaaaat 22220419  T
Q  101 atta 104  Q
    ||||    
T  22220418 atta 22220415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 10573313 - 10573125
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||| ||| ||||| || |||||||||||  ||||||||||||||||||||||||||| |||||| | | | |||||||||       
T  10573313 ttgtttcaaaatgaatgtcatttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacaatacttccaa--- 10573217  T
Q  101 attattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtattt 192  Q
    | |||||||||||| ||||||          | ||||||||||  ||||| |||||| ||||  || |||||||||||||| ||||||||||    
T  10573216 agtattattttttcattaatgaaaatcaaatcaatagttgattaggataatttggtaaaataacatctctctttcttttaaataatgtattt 10573125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19451370 - 19451292
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatac 79  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||||||| ||||    
T  19451370 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatac 19451292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 52957949 - 52957876
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  |||||||||||||||||||||||||||    
T  52957949 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaatt 52957876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2493100 - 2493180
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| |||||||| |||||||||| ||| || |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  2493100 ttgtttcaaaatgaaagtcactttcattttccaatgcaataataattttttcttttcaattgtacccttcaattaatacta 2493180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 25123872 - 25123780
Alignment:
Q  14 aatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattatt 106  Q
    ||||||| |||||||||||| | |||||||||| ||||||||||| ||||||||||||||| |||||| | | || |||||||||||||||||    
T  25123872 aatgtcattttcagttttcaatacaataataattttttcttttcagttgtacccttcaattaatactatatacacgacttccaaaatattatt 25123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 6991417 - 6991229
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    |||||||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||||||||| || ||| || | | |||| || |||   | |    
T  6991417 ttttaaaatgaatgtcactttcagttttcaatacaataataattttttcttttcaa-tgtacccttcagttaatattatatacactattttcaa---agt 6991322  T
Q  104 attattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    |||||||||||||||||          || |||||||| |  ||||| |||||| ||||  || |||||||||||||||||||| ||||||||    
T  6991321 attattttttctttaataaaaaataaaccaatagttgactaggataatttggtataataaaatatctctttcttttaattaatgcatttctta 6991229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 34316223 - 34316293
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||| ||||||||||||||||| || |||||||||||| |||| ||||||||||||||||||||||    
T  34316223 ttttaaaataaatgtcactttcagtttccaatgcaataataattttttattttcaattgtacccttcaatt 34316293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 54042342 - 54042264
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatac 79  Q
    ||||||||||||||||||||||||| |||| || || ||||||||| ||||||||||||||||||| ||||||| ||||    
T  54042342 ttgttttaaaatgaatgtcactttcggtttccaatgtaataataattttttcttttcaattgtacctttcaattaatac 54042264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 34413706 - 34413513
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||| ||||||||||||| |||  | |||||||||||  |||| |||||||||||||| ||||||| ||| || | | |||||||| |||||    
T  34413706 ttgtttcaaaataaatgtcactttcaatttcaaatgcaataataactttttattttcaattgtaccattcaattaatattatatacactacttctaaaat 34413607  T
Q  101 attattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    |||||  ||||||||||||||         || ||||||||||   |||| || ||| ||||  ||||||||||||||||||||| | ||||||||    
T  34413606 attat--ttttttctttaatgaaaaaagaaccaatagttgattagcataatttagtaaaataacatttctctttcttttaattaacgcatttctta 34413513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 39982108 - 39982173
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaat 73  Q
    ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||||||    
T  39982108 aaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaat 39982173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 41496203 - 41496308
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||| ||| |||||||||||||||| | |||||||||  |||||||||||||||||| |||||||| ||| || | | |||||| |||||||    
T  41496203 ttgtttcaaaataaatctcactttcagttttcaatacaataataactttttcttttcaattgtactcttcaattaatattatatacactactcccaaaat 41496302  T
Q  101 attatt 106  Q
    ||||||    
T  41496303 attatt 41496308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 44572024 - 44571951
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||||||||| |||||||||| || |||||||| ||  |||||||||||||||||||||||||||    
T  44572024 ttgttttaaaatgaatgtcgctttcagtttccaatgcaataaaaactttttcttttcaattgtacccttcaatt 44571951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 52162107 - 52162219
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    ||||||||||||||||||||||| ||||||  |||||||||  ||||| |||| |||| |||||||||||| |||||||| | |||| ||||||   | |    
T  52162107 ttttaaaatgaatgtcactttcaattttcaacgcaataata--atttttttttgaattatacccttcaattaatactaaatacactagttccaa---agt 52162201  T
Q  104 attattttttctttaatg 121  Q
    ||||||||||||||||||    
T  52162202 attattttttctttaatg 52162219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4505335 - 4505402
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtaccct 68  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  |||||||||||||||||||||    
T  4505335 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccct 4505402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 50203074 - 50203189
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||||||||||||||||||||||||   || |||||||||||  ||||||||||||||||||||||||||| ||| || | | | ||||||   ||     
T  50203074 ttgttttaaaatgaatgtcactttcagtc--caatgcaataataactttttcttttcaattgtacccttcaattaatattatatacattacttc---aaa 50203168  T
Q  101 attattattttttctttaatg 121  Q
    | |||||||||||||||||||    
T  50203169 agtattattttttctttaatg 50203189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 51733653 - 51733550
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| |||||||||||||||||||||||  | |||||||||||| ||||||||| | ||||||||| ||||| |||||   || |||||||||||| |    
T  51733653 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttctttttacttgtaccctccaattaatactctgcacactacttccaaagt 51733554  T
Q  101 atta 104  Q
    ||||    
T  51733553 atta 51733550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 19930712 - 19930818
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||| ||||||||||||||||||| ||| |  |||||||||||  ||||||||||||||||||||||||||| ||| ||    | |||||||||||||    
T  19930712 ttgtttcaaaatgaatgtcactttcaatttccgatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactacttccaaaa 19930811  T
Q  100 tattatt 106  Q
    |||||||    
T  19930812 tattatt 19930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 21864537 - 21864439
Alignment:
Q  6 ttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatta 104  Q
    ||||||||||||| ||||||||||| || |||||||||||  ||||||||||||||||| ||| ||||| |||||   || |||||||||||| |||||    
T  21864537 ttaaaatgaatgttactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaatactctgcacactacttccaaagtatta 21864439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 21920398 - 21920300
Alignment:
Q  6 ttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatta 104  Q
    ||||||||||||| ||||||||||| || |||||||||||  ||||||||||||||||| ||| ||||| |||||   || |||||||||||| |||||    
T  21920398 ttaaaatgaatgttactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaatactctgcacactacttccaaagtatta 21920300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 11364224 - 11364329
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||||| |||||||  |||||| ||||| | || ||||||||  ||||||||||||||||||||||||||| ||| || | | |||||||||||| |    
T  11364224 ttgttttaagatgaatgatactttcggtttttaatgaaataataactttttcttttcaattgtacccttcaattaatattatatatactacttccaaagt 11364323  T
Q  101 attatt 106  Q
    ||||||    
T  11364324 attatt 11364329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 31917954 - 31918027
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||||||| |||||||||| || || |||||||||| | |||||||||||||| ||||||||||||    
T  31917954 ttgttttaaaatgaatttcactttcagcttccaatgcaataatagttttttcttttcaattttacccttcaatt 31918027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 37624554 - 37624659
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||| ||||||||||||||||| || |||||||||||  ||||||||||||||||| ||| ||||| |||||   || |||||||| ||| |    
T  37624554 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaatactctgcacactacttcaaaagt 37624653  T
Q  101 attatt 106  Q
    ||||||    
T  37624654 attatt 37624659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 49080635 - 49080563
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| |||||||||||||||||||||||| || ||||||||||  |||| ||||||||||||||||||||||    
T  49080635 ttgtttcaaaatgaatgtcactttcagttttaat-gcaataataactttttattttcaattgtacccttcaatt 49080563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 7906148 - 7906076
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    ||||||||||||||||||||||| |  |||||||||||  ||||||||||||||||||||| ||||| |||||    
T  7906148 aaaatgaatgtcactttcagtttccggtgcaataataactttttcttttcaattgtaccctccaattaatact 7906076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 24940877 - 24940957
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||| ||||  ||| || |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  24940877 ttgtttcaaaatgaatgtcattttcgatttccaatgcaataataactttttcttttcaattgtacccttcaattaatacta 24940957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 29370604 - 29370708
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgta-cccttcaattgatactaaa-caaactacttccaaaata 101  Q
    ||||||||| |||||||||||||||||||| |  ||||||||  ||||||||||||||||| || ||||||| ||||||||  | |||||||||||| ||    
T  29370604 ttttaaaataaatgtcactttcagttttcaatataataataactttttcttttcaattgtatcctttcaattaatactaaattacactacttccaaagta 29370703  T
Q  102 ttatt 106  Q
    |||||    
T  29370704 ttatt 29370708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 37654408 - 37654487
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||||| || |||||| || | |||||||||  ||||||||||||||||||||||||||| ||||||    
T  37654408 ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattgtacccttcaattaatacta 37654487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 45839636 - 45839753
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaata 101  Q
    |||||| ||||||||||||||||||||||  | | |||||||||  |||| |||||||||||||| ||||||| ||| || | | | |||||||||| ||    
T  45839636 tgttttgaaatgaatgtcactttcagtttctaatacaataataactttttattttcaattgtaccattcaattaatattatatacattacttccaaagta 45839735  T
Q  102 ttattattttttctttaatg 121  Q
    ||||  ||||||||||||||    
T  45839736 ttat--ttttttctttaatg 45839753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25231173 - 25231240
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtaccct 68  Q
    |||||||||||||||||||||||||| ||| || |||||||||||  |||||||||| ||||||||||    
T  25231173 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttctattgtaccct 25231240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 52915701 - 52915598
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| |||||||||||| |||||||||| || |||||||||||  ||||||||||||||||| | | ||||| |||||   || |||||||||||| |    
T  52915701 ttgtttcaaaatgaatgtcgctttcagtttccaatgcaataataactttttcttttcaattgtatcatccaattaatactctgcacactacttccaaagt 52915602  T
Q  101 atta 104  Q
    ||||    
T  52915601 atta 52915598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 56460082 - 56460276
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattg--atactaaacaaactacttccaaaa 99  Q
    |||||||||||||||||||||||||| ||||| ||||||| |||  ||||||||| |||| || |||||||||   ||| || | | |||||||||||||    
T  56460082 tgttttaaaatgaatgtcactttcagctttcaatgcaatagtaactttttctttttaattatatccttcaattataatattatatacactacttccaaaa 56460181  T
Q  100 tattattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    ||||||| ||| ||  ||||||         |  |||| |||||   |||| || ||| |||| ||| |||||||||||||||||||||||||||||    
T  56460182 tattattttttctt--ttaatgaaaaacaaacttatagctgattagaataatttagtaaaataatatatctctttcttttaattaatgtatttctta 56460276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 18429991 - 18430067
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||||||| |||||| |||  |||| |||||||||  ||||||||||||||||||||||||||| ||||||    
T  18429991 ttttaaaatgaatgttactttcggttcccatt-caataataactttttcttttcaattgtacccttcaattaatacta 18430067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40011033 - 40010952
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataa-tattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||| ||||||||||| || |||||||| || |  ||| |||||||||||||||||||||| ||||||    
T  40011033 ttgttttaaaatgaatgttactttcagtttccaatgcaataacaacttcttttttttcaattgtacccttcaattaatacta 40010952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41920468 - 41920395
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||| ||||||| ||||||||| ||  ||||||||||  |||||||||||||| ||||||||||||    
T  41920468 ttgttttaaaataaatgtcattttcagtttccaaagcaataataactttttcttttcaattatacccttcaatt 41920395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 44650893 - 44650990
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattat 105  Q
    |||||||| ||||||||||||||||| |||||||| || |  |||||||||||| |||||  ||||| |||||| | | ||||||| |||||||||||    
T  44650893 aaaatgaacgtcactttcagttttcaatgcaataaaaaaaaattcttttcaattatacccaacaattaatactatatacactactttcaaaatattat 44650990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 50623081 - 50623154
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||| |||| | ||| |||||||| |||||||||||  |||||||||||||| ||||||||||||    
T  50623081 ttgttttaaaatgtatgttatttttagttttcaatgcaataataactttttcttttcaattatacccttcaatt 50623154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 29519684 - 29519604
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||| ||||||||||| ||||| || |||||||||||  |||| |||||||||||| ||||||||| ||||||    
T  29519684 ttgtttcaaaataaatgtcacttttagtttccaatgcaataataactttttattttcaattgtatccttcaattaatacta 29519604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 620332 - 620226
Alignment:
Q  6 ttaaaatgaatgtcactttcagttttcattgcaataataatatttt-cttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatta 104  Q
    ||||||||||| ||| ||| |||||  | |||||||||||| |||| ||||||||||||||||||||||| |||||  | | | |||||||||| |||||    
T  620332 ttaaaatgaatatcagtttaagtttctaatgcaataataatttttttcttttcaattgtacccttcaattaatactctatacattacttccaaagtatta 620233  T
Q  105 ttatttt 111  Q
    || ||||    
T  620232 ttttttt 620226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27943705 - 27943631
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataa-tattttcttttcaattgtacccttcaatt 74  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||| |  ||| ||||||||| ||||||||||||    
T  27943705 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataacttcttttttttcaattatacccttcaatt 27943631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 38510379 - 38510301
Alignment:
Q  26 agttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatta 104  Q
    |||||||| |||||||||||  ||||||||||||||||||| | ||||| |||||  ||| |||||||||||| |||||    
T  38510379 agttttcaatgcaataataactttttcttttcaattgtaccatccaattaatactctacacactacttccaaagtatta 38510301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 46392217 - 46392147
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||  ||||||||||| ||||||  ||||||||||| |||||||||||||| |||| |||||||    
T  46392217 ttttaaaatggctgtcactttcacttttcaaagcaataataattttttcttttcaattatacctttcaatt 46392147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 52253843 - 52253919
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttc---ttttcaattgtacccttcaatt 74  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  | |||   ||||||||||||||||||||||    
T  52253843 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttcttctttttttcaattgtacccttcaatt 52253919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 56373733 - 56373663
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||| | |||||||||||  | |  ||||||||| |||||||||||||||||||||||||||    
T  56373733 ttttaaaatgaatattactttcagtttctaatataataataattttttcttttcaattgtacccttcaatt 56373663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 2728550 - 2728477
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||||| ||||||||| || |||||||||||  ||||||||||||  |||||||||| || ||||||    
T  2728550 aaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaacagtacccttcagttaatacta 2728477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 49089462 - 49089534
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||  |||| ||| ||||| ||||||||||||    
T  49089462 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataa-cttttttttccaattatacccttcaatt 49089534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 53814649 - 53814576
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||||||||| ||||  || |||||||||||  |||| |||| ||||||||||||||||| ||||||    
T  53814649 aaaatgaatgtcacttttagttaacaatgcaataataactttttatttttaattgtacccttcaattaatacta 53814576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 44868401 - 44868305
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    ||||||||||||||||||||||| |||||| |      ||||  ||||||||||||||||||| ||||||| ||| || | | | |||||||||||||||    
T  44868401 ttttaaaatgaatgtcactttcaattttcaat------ataactttttcttttcaattgtaccattcaattaataatatatacattacttccaaaatatt 44868308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44061006 - 44061071
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacc 66  Q
    |||||||| ||||||||||||||||| |||  | | |||||||||  |||||||||||||||||||    
T  44061006 ttgttttataatgaatgtcactttcattttctaatacaataataactttttcttttcaattgtacc 44061071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 47458544 - 47458464
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatatttt-cttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||| ||| | ||||| || |||||||||| | |||| ||||||||||||||| ||||||| ||||||    
T  47458544 ttgttttaaaatgaatgtaactcttagttt-caatgcaataatattttttttcttttcaattgtaccattcaattaatacta 47458464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 24157183 - 24157263
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||| ||||||| ||| |||||  | |||||||||||| ||||||||| ||||||| |||| |||| ||||||    
T  24157183 ttgtttcaaaataaatgtcaattttagtttctaatgcaataataattttttctttttaattgtatcctttaattaatacta 24157263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 27653674 - 27653790
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||||||||| ||||||| ||| |||||  | |||||| ||||  ||||  ||||||||||||||||||||| ||||||    | |||||||||||||    
T  27653674 ttgttttaaaataaatgtcatttttagtttctaatgcaatgataacttttt--tttcaattgtacccttcaattaatactatgttacactacttccaaaa 27653771  T
Q  100 tattattattttttctttaatg 121  Q
       |||||||||||||||||||    
T  27653772 ---tattattttttctttaatg 27653790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28734596 - 28734640
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataa 45  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||    
T  28734596 ttgtttcataatgaatgtcactttcagtttccattgcaataataa 28734640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33033076 - 33033120
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataa 45  Q
    |||||||||||||||||||||||| ||||| || |||||||||||    
T  33033076 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataa 33033120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 18053079 - 18053033
Alignment:
Q  53 ttttcaattgtacccttcaattgatactaaacaaactacttccaaaa 99  Q
    |||||||||||||||||||||| |||||| | | |||||||||||||    
T  18053079 ttttcaattgtacccttcaattaatactatatatactacttccaaaa 18053033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 30780264 - 30780218
Alignment:
Q  28 ttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| |||||||||||  |||||||||||||||||| ||||||||    
T  30780264 ttttcagtgcaataataactttttcttttcaattgtactcttcaatt 30780218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 40837128 - 40837193
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtaccc 67  Q
    |||||| ||||||||||||||||||| ||| || |||||||||||  |||| |||||||| ||||||    
T  40837128 ttgtttcaaaatgaatgtcactttcattttccaatgcaataataa-ctttttttttcaatcgtaccc 40837193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 47774938 - 47774865
Alignment:
Q  9 aaatgaatgtcactttcagttttcattgcaataataatattttctttt-caattgtacccttcaattgatacta 81  Q
    ||||||||| |||||||  |||||| ||||||| ||||||||| |||| ||||||||||||  |||| ||||||    
T  47774938 aaatgaatgacactttcgattttcaatgcaatattaatattttttttttcaattgtaccctctaattaatacta 47774865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 50621339 - 50621290
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttc 57  Q
    ||||| ||||||||||| |||||||| |||||||||||  ||||||||||    
T  50621339 aaaataaatgtcactttaagttttcaatgcaataataactttttcttttc 50621290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 56555861 - 56555832
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttt 30  Q
    ||||||||||||||||||||||||||||||    
T  56555861 ttgttttaaaatgaatgtcactttcagttt 56555832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 196
Target Start/End: Complemental strand, 18052682 - 18052654
Alignment:
Q  168 tctctttcttttaattaatgtatttctta 196  Q
    |||||||||||||||||||||||||||||    
T  18052682 tctctttcttttaattaatgtatttctta 18052654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 2e-32; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 29567894 - 29568086
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||||||| |||||| | | |||||||||||       
T  29567894 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactacttccaa--- 29567990  T
Q  101 attattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    | |||||||||||||||||||         || ||||||||||   |||| |||||| ||||  || | |||||||||||||||||| ||||||||    
T  29567991 agtattattttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaataacatatttctttcttttaattaatgcatttctta 29568086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 26595221 - 26595030
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaata 101  Q
    ||||||||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||| ||||||| |||||| | | |||| ||||||   |    
T  26595221 tgttttaaaatgaatgtcactttcagtttacaatgcaataataaatttttcttttcaattgtaccattcaattaatactatatacactatttccaa---a 26595125  T
Q  102 ttattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
      |||| |||||||||||||         || ||| ||||||  ||||| |||||| ||||  || |||||||||||||||||||||||||||||    
T  26595124 gaattaatttttctttaatgaaaaacaaaccaataattgattaggataatttggtaaaataacatctctctttcttttaattaatgtatttctta 26595030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 196
Target Start/End: Complemental strand, 25561004 - 25560833
Alignment:
Q  22 tttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattattattttttctttaatg 121  Q
    ||||||||| || |||||||||||| |||||||||||||| |||| ||||||| |||||| | | ||||||||||||||||   ||||||||||||||||    
T  25561004 tttcagtttccaatgcaataataattttttcttttcaattatacctttcaattaatactatatacactacttccaaaatat---tattttttctttaatg 25560908  T
Q  122 nnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
             |  ||||||||||  ||||| |||||| ||||  || |||||||||||||||||||||||||||||    
T  25560907 aaaaacaaactaatagttgattatgataatttggtaaaataacatctctctttcttttaattaatgtatttctta 25560833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 46554796 - 46554912
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||||||||||||||||| |||||||| || |||||||||||  |||| |||||||||||||||||||||| |||||| | | |||||||||||| |    
T  46554796 ttgttttaaaatgaatgtcaccttcagtttccactgcaataataactttttattttcaattgtacccttcaattaatactatatacactacttccaaagt 46554895  T
Q  101 attattattttttctttaat 120  Q
    |||   ||||||||||||||    
T  46554896 att---attttttctttaat 46554912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15823032 - 15823112
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  15823032 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatacta 15823112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 25487089 - 25487189
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||| ||||| |||||   || |||||||||||| ||||    
T  25487089 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagtatt 25487188  T
Q  104 a 104  Q
    |    
T  25487189 a 25487189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 34047388 - 34047285
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||||||| ||||| || |||||||||||  ||||||||||||||||||||| ||||| |||||  ||| ||||||||||||||    
T  34047388 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctacacactacttccaaaat 34047289  T
Q  101 atta 104  Q
    ||||    
T  34047288 atta 34047285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 10842785 - 10842858
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||||    
T  10842785 aaaatgaatgtcactttcagttttcaatgcaataataacattttcttttcaattgtactcttcaattaatacta 10842858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 12591235 - 12591130
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||||||||||||||| ||||| || |||||||||||  ||||||||||||||||||||| ||||| ||||| | || ||||||| |||| |    
T  12591235 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactcagcacactactttcaaatt 12591136  T
Q  101 attatt 106  Q
    ||||||    
T  12591135 attatt 12591130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 31699405 - 31699250
Alignment:
Q  38 aataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattattattttttctttaatgnnnnnnnnnccgatag 137  Q
    ||||||||| ||||||||||||||||||||||||||| |||||| | | | ||||||||||||||   ||||||||||||||||         || ||||    
T  31699405 aataataattttttcttttcaattgtacccttcaattaatactataaacattacttccaaaatat---tattttttctttaatgaaaaacaaaccaatag 31699309  T
Q  138 ttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    ||||||  ||||| |||||| ||||  || ||||||||||||||||||||| |||||||    
T  31699308 ttgattatgataatttggtaaaataacatctctctttcttttaattaatgtgtttctta 31699250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 40717442 - 40717369
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||| ||||||    
T  40717442 aaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaactgtacccttcaattaatacta 40717369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9915441 - 9915521
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||||| ||||||||| || |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  9915441 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataaatttttcttttcaattgtacccttcaattaatacta 9915521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 15573605 - 15573729
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataa----tattttcttttcaattgtacccttcaattgatacta-aacaaactacttcc 95  Q
    |||||| |||||||||||||||||||||||||| |||||||||||    | ||||||||||||||||||||||||||| ||| ||    | |||||||||    
T  15573605 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttttttcttttcaattgtacccttcaattaatattatgttagactacttcc 15573704  T
Q  96 aaaatattattattttttctttaatg 121  Q
    ||||||||||| ||||||||||||||    
T  15573705 aaaatattatt-ttttttctttaatg 15573729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44258660 - 44258588
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaat 73  Q
    |||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| ||||    
T  44258660 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctccaat 44258588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 49468864 - 49468784
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||||||| ||||||    
T  49468864 ttgtttcaaaatgaatgtaactttcagtttccaatgcaataataacattttcttttcaattgtacccttcaattaatacta 49468784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 50249308 - 50249411
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||| ||||| |||||   || |||||||||||| |    
T  50249308 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactttgcacactacttccaaagt 50249407  T
Q  101 atta 104  Q
    ||||    
T  50249408 atta 50249411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 44108597 - 44108717
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta---aacaaactacttccaa 97  Q
    |||||||||||| ||||||||||||||||| || | |||||||||  ||||||||||||||||||||||||||| ||||||    ||||  |||||||||    
T  44108597 ttgttttaaaataaatgtcactttcagtttccaatacaataataactttttcttttcaattgtacccttcaattaatactatgttacaa--tacttccaa 44108694  T
Q  98 aatattattattttttctttaatg 121  Q
    | ||||||| ||||||||||||||    
T  44108695 agtattatt-ttttttctttaatg 44108717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 44557197 - 44557124
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||||||||||||||||||| | || ||||||||||| |||||||||||||||||||| |||||||    
T  44557197 ttgttttaaaatgaatgtcactttcagtctccaatgcaataataacattttcttttcaattgtaccattcaatt 44557124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 50094234 - 50094307
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  50094234 aaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatacta 50094307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 27720963 - 27721059
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatta 104  Q
    |||||||||||||||||||||||||| |  ||||||||  ||||||||||||||||||||| ||||| ||||| | || |||||||||||| |||||    
T  27720963 aaaatgaatgtcactttcagttttcaatataataataactttttcttttcaattgtaccctccaattaatactcagcacactacttccaaagtatta 27721059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32807091 - 32807011
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||||| | ||||||    
T  32807091 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaaataatacta 32807011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 38531450 - 38531370
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||| ||||||||| || |||||||||||| |||||||||||||| | |||||||||||||||||    
T  38531450 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataattttttcttttcaattatgcccttcaattgatacta 38531370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26352234 - 26352155
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||  ||||||||||||||||||||| ||||| |||||    
T  26352234 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatact 26352155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 34032233 - 34032154
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    |||||| ||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||| | ||||| |||||    
T  34032233 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccgtccaattaatact 34032154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1740794 - 1740676
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||||||||||||||||||||||||||| || || ||||||||  |||| |||||||||||||| ||||||| ||||||    | |||||||||||||    
T  1740794 ttgttttaaaatgaatgtcactttcagtttccaatgaaataataactttttattttcaattgtaccattcaattaatactacgttacactacttccaaaa 1740695  T
Q  100 tattattattttttctttaat 120  Q
     |||||  |||||||||||||    
T  1740694 cattat--ttttttctttaat 1740676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13408418 - 13408341
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgata 78  Q
    |||||||||||||||| | |||||||||||||| |||||||||||  |||||||||||||||||||||| | ||||||    
T  13408418 ttgttttaaaatgaattttactttcagttttcaatgcaataataactttttcttttcaattgtaccctttagttgata 13408341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 16757347 - 16757242
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| |||||| |||||||||||||||| || |||||||||||  | ||||||||||||||||||||||||| |||||| | | || |||| |||| |    
T  16757347 ttgtttcaaaatgtatgtcactttcagtttccaatgcaataataacttattcttttcaattgtacccttcaattaatactatatacacaactttcaaagt 16757248  T
Q  101 attatt 106  Q
    ||||||    
T  16757247 attatt 16757242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 25151821 - 25151886
Alignment:
Q  9 aaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||    
T  25151821 aaatgaatgtcactttcggtttccaatgcaataataacattttcttttcaattgtacccttcaatt 25151886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 35848086 - 35848006
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||| ||||||||||||||||||| || |||||||||||  ||||||||||||||||||| ||||||| ||||||    
T  35848086 ttgtttgaaagtgaatgtcactttcagtttacaatgcaataataactttttcttttcaattgtacctttcaattaatacta 35848006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 48025407 - 48025327
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| |||||||||||||||||| |||| || |||||||||||  ||||| ||||||||||||||||||||| ||||||    
T  48025407 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcgtttcaattgtacccttcaattaatacta 48025327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 5463573 - 5463691
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||| ||||||||||||||||||||||| || |||||| ||||  |||||||||||||||||| ||| |||| ||||||    | |||||||||||||    
T  5463573 ttgtttcaaaatgaatgtcactttcagtttccaatgcaattataactttttcttttcaattgtacactttaattaatactatgttacactacttccaaaa 5463672  T
Q  100 tattattattttttctttaatg 121  Q
       |||||||||||||||||||    
T  5463673 ---tattattttttctttaatg 5463691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 14593465 - 14593406
Alignment:
Q  9 aaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtaccct 68  Q
    |||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  14593465 aaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccct 14593406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 27208995 - 27209168
Alignment:
Q  9 aaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattattat 108  Q
    ||||||||||||||||| |||| || |||||||||||  |||| |||||||||||||| ||||||| ||| || | | |||||||||||   | ||||||    
T  27208995 aaatgaatgtcactttcggtttccaatgcaataataactttttattttcaattgtaccattcaattaatattatatacactacttccaa---agtattat 27209091  T
Q  109 tttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaa 185  Q
    |||||||||||||          | ||||||||||  ||||| |||||| ||||  || ||||||||||||||||||    
T  27209092 tttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacatatctctttcttttaattaa 27209168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 46286966 - 46286891
Alignment:
Q  6 ttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| |||||||||||||| |||||| |||||||||||  ||||||||||||||| ||||||||||| ||||||    
T  46286966 ttaaaaagaatgtcactttcatttttcaatgcaataataactttttcttttcaattgcacccttcaattaatacta 46286891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 7191360 - 7191167
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||| ||||||||||||  |||||  || ||||||||  |||||||||||||| |||| ||||||| |||||| | | |||||||  |||||    
T  7191360 ttgttttaaaataaatgtcactttcgattttctatgtaataataactttttcttttcaattatacctttcaattaatactatatacactacttttaaaat 7191261  T
Q  101 attattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    |||||  |||||||||||| |         |  ||||||||||  ||||| |||||| ||||  || |||||||||||||||||||  ||||||||    
T  7191260 attat--ttttttctttaacgaaaaataaacaaatagttgattaggataatttggtaaaataacatctctctttcttttaattaatacatttctta 7191167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 39477860 - 39477756
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||||||||| |||||||||| | ||| || |||||||||||| |||| ||||||||||||| |||||||| |||||| | | ||||||||| || |    
T  39477860 ttgttttaaaatggatgtcacttttaatttccaatgcaataataatttttt-ttttcaattgtacacttcaattaatactatatacactacttcctaagt 39477762  T
Q  101 attatt 106  Q
    ||||||    
T  39477761 attatt 39477756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 52706880 - 52706952
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||| |||||||||||||||||| | || ||||||||| ||||||||| |||||||||||||||||    
T  52706880 ttgttttaaaat-aatgtcactttcagtttttaatgtaataataattttttctttttaattgtacccttcaatt 52706952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31491923 - 31491843
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||||| |||||| ||  |||||||  ||||||||||||||||| ||||||||| ||||||    
T  31491923 ttgtttcaaaatgaatgtcactttcaattttcaatgtcataataactttttcttttcaattgtatccttcaattaatacta 31491843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43358353 - 43358273
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| || |||||| ||||||||| |||||| ||||||||||| ||||| ||||||||||||| |||||||| ||||||    
T  43358353 ttgtttcaatatgaatatcactttcacttttcaatgcaataataacattttattttcaattgtactcttcaattaatacta 43358273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 43759347 - 43759403
Alignment:
Q  18 tcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||||||||||||    
T  43759347 tcactttcagttttcgatgcaataataattttttcttttcaattgtacccttcaatt 43759403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 46045971 - 46046051
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| |||||||||||||||||||||||||  |||||||||||  |||| ||||||||| |||||||| ||| ||||||    
T  46045971 ttgtttcaaaatgaatgtcactttcagttttcgatgcaataataactttttattttcaattatacccttcgattaatacta 46046051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 48009008 - 48009088
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||||||||| || ||| |||||| | |||||||||||  ||||||||||||||||||| ||||||| ||||||    
T  48009008 ttgttttaaaatgaatggcatttttagtttttaatgcaataataactttttcttttcaattgtaccgttcaattaatacta 48009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 2610983 - 2610872
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||| ||||||||   |||||||||||||| | |||||||||| ||||||||||||||||| | ||||||| ||| |  | | |||||||||||| |    
T  2610983 ttgttttgaaatgaatacgactttcagttttcaatacaataataattttttcttttcaattgtaacattcaattaatattctatacactacttccaaagt 2610884  T
Q  101 attattattttt 112  Q
    |||||| |||||    
T  2610883 attatttttttt 2610872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 24611666 - 24611554
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaatattatt 106  Q
    ||||||||||||||||| |||||  | || ||||||||  ||||||||||||||||||||||||||| ||||||    | |||||||||||| ||||||     
T  24611666 aaaatgaatgtcacttttagtttctaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagtattat- 24611568  T
Q  107 attttttctttaatg 121  Q
     ||||||||||||||    
T  24611567 -ttttttctttaatg 24611554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 26755218 - 26755335
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||| ||||||||||||||||||||||| || | || ||||||  |||||||||||||| |||||||||||| ||||||   || |||||||||||      
T  26755218 ttgtttcaaaatgaatgtcactttcagtttccaatacattaataactttttcttttcaatt-tacccttcaattaatactatgtcacactacttccaa-- 26755314  T
Q  100 tattattattttttctttaatg 121  Q
     | |||||||||||||||||||    
T  26755315 -agtattattttttctttaatg 26755335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 49900910 - 49900794
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttc-attgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||||||| ||||||||||||||||||| | | |||||||||  |||| |||||||||||||| ||||||| ||| || | | ||||||| |||| |    
T  49900910 tgttttaaaataaatgtcactttcagttttcaaatacaataataactttttattttcaattgtacctttcaattaataatatatacactactttcaaagt 49900811  T
Q  101 attattattttttctttaa 119  Q
    |||||  ||||||||||||    
T  49900810 attat--ttttttctttaa 49900794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 52024387 - 52024308
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    |||||| ||||| ||||| | |||||||||||| |||||||||||  ||||||||||||||||||||| ||||| |||||    
T  52024387 ttgtttcaaaataaatgttattttcagttttcaatgcaataataaatttttcttttcaattgtaccctccaattaatact 52024308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18794694 - 18794593
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||| ||||||| |||||||||  | |||||||||||  ||||||||||| ||| ||||||||||| ||| || | | ||||||||||||||    
T  18794694 ttgttttaaaataaatgtca-tttcagtttcgaatgcaataataactttttcttttcagttgcacccttcaattaatattatatacactacttccaaaat 18794596  T
Q  101 att 103  Q
    |||    
T  18794595 att 18794593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 24884416 - 24884494
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaa 82  Q
    ||||||||| ||||||||||||| ||| || |||||||||||  |||| ||||||||| |||||||||||| |||||||    
T  24884416 ttttaaaataaatgtcactttcaatttccaatgcaataataactttttattttcaattatacccttcaattaatactaa 24884494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 52125281 - 52125216
Alignment:
Q  9 aaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||| ||||||||| || |||||||||||| |||| || |||||||||||||||||||    
T  52125281 aaatgaatgtcaatttcagtttccaatgcaataataattttttattctcaattgtacccttcaatt 52125216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 49426565 - 49426488
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||| ||||| |||||||||  ||||||||| |||||||||||| |||||||||||| ||||||| |||||| ||||||    
T  49426565 tgtttcaaaataaatgtcact--cagttttcaatgcaataataattttttcttttcaactgtacccgtcaattaatacta 49426488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 34110535 - 34110598
Alignment:
Q  11 atgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||| ||||||||||| || |||||||||||  ||||||||| |||||||||||||||||    
T  34110535 atgaatgttactttcagtttccaatgcaataataactttttctttttaattgtacccttcaatt 34110598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30292938 - 30293011
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||||||| |||||||||||| || |||||||||||  || | ||||||| |||||||| |||||    
T  30292938 ttgttttaaaatgaatgccactttcagtttccaatgcaataataactttgttttttcaactgtaccctccaatt 30293011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 8895165 - 8894976
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    ||||||||| ||||| ||||| | |||| | || |||| |||  ||||||||| ||||||||||||||||| ||| || | | |||| || ||||||||     
T  8895165 ttttaaaataaatgttacttttaatttttaatgtaatagtaaatttttctttttaattgtacccttcaattaatattatatacactattttcaaaatat- 8895067  T
Q  104 attattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
      |||||||| |||||||          | ||||||||||  ||||| |||||| ||||  || |||||||||||||||||||| ||||||||    
T  8895066 --tattttttttttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacatctctctttcttttaattaatgcatttctta 8894976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 14373563 - 14373493
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||||||| ||||||||| || ||||| |||||  |||| ||||||||| |||||| |||||    
T  14373563 ttttaaaatgaatgtcattttcagtttccaatgcaacaataactttttattttcaattataccctccaatt 14373493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 16757221 - 16757159
Alignment:
Q  134 atagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    ||||||||||  ||||  |||||| ||||  ||||||||||||||||||||||||||||||||    
T  16757221 atagttgattaggatagtttggtaaaataacatttctctttcttttaattaatgtatttctta 16757159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 31798587 - 31798706
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||| |||||||| |||||||||||||| |  | |||||||||  |||||||||||||| |||| || |||| ||||||    | ||||||||||||     
T  31798587 ttgtttcaaaatgaacgtcactttcagtttccgatacaataataactttttcttttcaattataccttttaattaatactatgttacactacttccaaag 31798686  T
Q  100 tattattattttttctttaatg 121  Q
    ||||||  ||||||||||||||    
T  31798687 tattat--ttttttctttaatg 31798706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 46271468 - 46271390
Alignment:
Q  3 gttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||| ||||||||||||| ||||||||| || || ||||||||| |||| ||||||||  ||| |||||||| ||||||    
T  46271468 gtttcaaaatgaatgtcattttcagtttccaatggaataataattttttattttcaataatacacttcaattaatacta 46271390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 7214185 - 7214109
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||| ||||||||||   ||||||| |||||||||||  ||||||||| |||| ||| |||||||| ||||||    
T  7214185 tgttttaaaataaatgtcactt---gttttcaatgcaataataaatttttctttttaattatacgcttcaattaatacta 7214109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 33622515 - 33622454
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtac 65  Q
    ||||||||||||||||| ||||  |||||| |||||||||||  || |||||||||||||||    
T  33622515 ttttaaaatgaatgtcattttcgattttcaatgcaataataactttatcttttcaattgtac 33622454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24483386 - 24483450
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtac 65  Q
    |||||| ||||||||||||| ||||||||| || | |||||||||   |||||||||||||||||    
T  24483386 ttgtttcaaaatgaatgtcagtttcagtttccaatacaataataactgtttcttttcaattgtac 24483450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 52066420 - 52066369
Alignment:
Q  22 tttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||| |||||| |||| ||||||| |||||||||||||||||||||||||||    
T  52066420 tttcaattttcaatgcagtaataat-ttttcttttcaattgtacccttcaatt 52066369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 12484781 - 12484678
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||| ||| ||||| ||  || | |||||||||  |||||||||||| |||||||| ||||| ||| ||  || |||||||||||| |    
T  12484781 ttgtttcaaaatgaatttcattttcatttgccaatacaataataactttttcttttcaactgtaccctccaattaatattaggcacactacttccaaagt 12484682  T
Q  101 atta 104  Q
    ||||    
T  12484681 atta 12484678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38947653 - 38947696
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataata 44  Q
    |||||||||||||||||||||||||||| | || ||||||||||    
T  38947653 ttgttttaaaatgaatgtcactttcagtatccaatgcaataata 38947696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 39125647 - 39125718
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaat 73  Q
    ||||| ||||||| ||||| ||| |||||||| |||||||||||  |||||||| || || |||||||||||    
T  39125647 tgtttcaaaatgactgtcattttaagttttcaatgcaataataaatttttctttccagttctacccttcaat 39125718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 41857311 - 41857415
Alignment:
Q  1 ttgttttaaaatgaatgtcacttt-cagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaa 99  Q
    ||||||||||||||| |||| ||| || ||| || | |||||||||| |||  ||||||||| ||||||  |||| ||||||  || ||||||||||||     
T  41857311 ttgttttaaaatgaacgtcatttttcattttccaatacaataataatttttctttttcaattataccctctaattaatactatgcacactacttccaaat 41857410  T
Q  100 tatta 104  Q
    |||||    
T  41857411 tatta 41857415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 44557090 - 44557034
Alignment:
Q  136 agttgattcagataacttggtagaatattatttctctttcttttaattaatgtattt 192  Q
    |||| ||| |||||| |||||| ||||  ||||||||||||||||||||||| ||||    
T  44557090 agtttattaagataatttggtaaaataacatttctctttcttttaattaatgcattt 44557034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 49403003 - 49402951
Alignment:
Q  22 tttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||| || |||||||||||  |||||||||||||||||| || |||||    
T  49403003 tttcagtttccaatgcaataataactttttcttttcaattgtactctccaatt 49402951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 51244988 - 51244893
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaa 98  Q
    ||||||||||| || |||||||||| ||| || | |||||||||  ||||||||||||||||||  |||| || |||||| | | | ||||||||||    
T  51244988 tgttttaaaataaaagtcactttcacttt-caatacaataataactttttcttttcaattgtacatttcagttaatactatatacattacttccaaa 51244893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 6e-30; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 39463257 - 39463374
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||||||| |||||| | | |||||||||||       
T  39463257 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactacttccaa--- 39463353  T
Q  101 attattattttttctttaatg 121  Q
    | |||||||||||||||||||    
T  39463354 agtattattttttctttaatg 39463374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 5295554 - 5295451
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattatta 107  Q
    ||||||||||||||||| |||||  | |||||||||||| ||||||||||||||||||||||||||| ||| || | | ||||||||||||||||||||     
T  5295554 aaaatgaatgtcactttaagtttctaatgcaataataattttttcttttcaattgtacccttcaattaatattatatacactacttccaaaatattattt 5295455  T
Q  108 tttt 111  Q
    ||||    
T  5295454 tttt 5295451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 15160601 - 15160498
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||| ||||| |||||   || ||||||||||||||    
T  15160601 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaaat 15160502  T
Q  101 atta 104  Q
    ||||    
T  15160501 atta 15160498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 40362433 - 40362536
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||||| ||||| |||||   || ||||| ||||||||    
T  40362433 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattttaccctccaattaatactctgcacactacgtccaaaat 40362532  T
Q  101 atta 104  Q
    ||||    
T  40362533 atta 40362536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 43084779 - 43084702
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||| ||||||| ||||||    
T  43084779 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacctttcaattaatacta 43084702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4760713 - 4760633
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||||||||||| ||| || ||||| |||||| ||||||||||||||||||||||||||| ||||||    
T  4760713 ttgttttaaaatgaatgtcactttcattttccaatgcaacaataattttttcttttcaattgtacccttcaattaatacta 4760633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 39698821 - 39698741
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  39698821 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatacta 39698741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 514875 - 514945
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||| |||||||||    
T  514875 ttttaaaatgaatgtcactttcaattttcaatgcaataataattttttcttttcaattgtatccttcaatt 514945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 6374412 - 6374528
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||| ||| || | | | |||||||||       
T  6374412 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgta-ccttcaattaatattatatacattacttccaa--- 6374507  T
Q  101 attattattttttctttaatg 121  Q
    | |||||||||||||||||||    
T  6374508 agtattattttttctttaatg 6374528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 17920954 - 17921073
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||||| |||||||| ||| ||    | ||||||||||||     
T  17920954 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctttacaattgtactcttcaattaatattatgttacactacttccaaag 17921053  T
Q  100 tattattattttttctttaatg 121  Q
    ||||||  ||||||||||||||    
T  17921054 tattat--ttttttctttaatg 17921073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 31693776 - 31693703
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||||||| |||||||||||||||| |||||||||||  ||||||||||||||||||| |||||||    
T  31693776 ttgttttaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgtacctttcaatt 31693703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 15227565 - 15227685
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| |||||||||||||||||||  ||||| |||||||||||   |||||||||||| |||| |||||||| |||||| | | || |||| |||| |    
T  15227565 ttgtttcaaaatgaatgtcactttcaaatttcaatgcaataataaatgtttcttttcaatggtacacttcaattaatactatatacacaactttcaaagt 15227664  T
Q  101 attattattttttctttaatg 121  Q
    |||||| ||||||||||||||    
T  15227665 attatttttttttctttaatg 15227685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 29312344 - 29312228
Alignment:
Q  5 tttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatta 104  Q
    |||||||||||||||| ||||||||| || |||||||||||   ||| ||||||||||||| |||||||| |||||| | | ||||||||  || || ||    
T  29312344 tttaaaatgaatgtcattttcagtttccaatgcaataataaccgtttgttttcaattgtactcttcaattaatactatatacactacttcagaagtagta 29312245  T
Q  105 ttattttttctttaatg 121  Q
    |||||||||||||||||    
T  29312244 ttattttttctttaatg 29312228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 34156535 - 34156650
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatatttt-cttttcaattgtacccttcaattgatactaaacaaactacttccaaaatat 102  Q
    ||||||||||||| |||||| | |||| || |||||||||||| |||| ||||||||||||||||||||||| ||||||   | |||||||||||||       
T  34156535 ttttaaaatgaatatcacttacggtttccaatgcaataataatttttttcttttcaattgtacccttcaattaatactatgtacactacttccaaaa--- 34156631  T
Q  103 tattattttttctttaatg 121  Q
    |||||||||||||||||||    
T  34156632 tattattttttctttaatg 34156650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 19438242 - 19438353
Alignment:
Q  9 aaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaatattatta 107  Q
    |||| ||||||||| ||||||| || || ||||||||  ||||||||||||||||||||||||||| |||||| |  | ||||||||||||||||  |||    
T  19438242 aaataaatgtcactctcagtttccaatgtaataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaaatat--tta 19438339  T
Q  108 ttttttctttaatg 121  Q
    ||||||||||||||    
T  19438340 ttttttctttaatg 19438353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4989476 - 4989549
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| ||||||||| ||||||||||||| || |||||||||||  |||||||||||||||||||||||||||    
T  4989476 ttgtttcaaaatgaatatcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaatt 4989549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9304788 - 9304715
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| ||||||||||| ||||| ||||| || |||||||||||| |||||||||||||||||||||||||||    
T  9304788 ttgtttcaaaatgaatgtgacttttagtttccaatgcaataataattttttcttttcaattgtacccttcaatt 9304715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40228572 - 40228645
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||  |||||||    
T  40228572 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacatttcaatt 40228645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 6116160 - 6116064
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaa 97  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||  |||||||||||||| ||||||||  || |||||| | | |||||||||||    
T  6116160 ttgttttaaaatgaatatcactttcggttttcaatgcaataataactttttcttttcaattatacccttcgtttaatactatatacactacttccaa 6116064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 14234373 - 14234173
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttca---attgatactaaacaaactacttccaa 97  Q
    |||||||||||||||||||||||| | |||  | ||||||||||||||||| ||||||||||||||||| |   | | |||||| | | |||||||||||    
T  14234373 ttgttttaaaatgaatgtcacttttaatttctaatgcaataataatatttttttttcaattgtaccctttagttaataatactatatacactacttccaa 14234274  T
Q  98 aatattattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttcttac 197  Q
    ||   ||||||||||||||||| |         || ||||||||||  ||||| |||| | ||||  || |||||||| |||||||||||||||| |||     
T  14234273 aa---tattattttttctttaacgaaaaacaaaccaatagttgattaggataatttggcaaaataacatatctctttcgtttaattaatgtattttttaa 14234177  T
Q  198 tatt 201  Q
    ||||    
T  14234176 tatt 14234173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 43448714 - 43448794
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||| ||||||||||||| || |||||||||||  |||| |||||||||||||||||||||| ||||||    
T  43448714 ttgtttcaaaatgaatatcactttcagtttccaatgcaataataacttttttttttcaattgtacccttcaattaatacta 43448794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 105
Target Start/End: Original strand, 36921360 - 36921459
Alignment:
Q  6 ttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattat 105  Q
    |||||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||| | ||||| |||||   || | |||||||||| ||||||    
T  36921360 ttaaaatgaacgtcactttcaattttcaatgcaataataattttttcttttcaattgtaccttccaattaatactctgcacattacttccaaattattat 36921459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 37559688 - 37559609
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    |||||||||||| ||||||||||||||||| || | |||||||||  ||||||||||||||||||||| ||||| |||||    
T  37559688 ttgttttaaaatcaatgtcactttcagtttccaatacaataataactttttcttttcaattgtaccctccaattaatact 37559609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 39766014 - 39765912
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| |||||||||||||||||||||||||| |||||||||||  |||||||||| | |||||||| ||||| |||||   || |||||||||||| |    
T  39766014 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttc-actgtaccctccaattaatactctgcacactacttccaaagt 39765916  T
Q  101 atta 104  Q
    ||||    
T  39765915 atta 39765912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 45359049 - 45358932
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||| ||||| ||||| |||||| |||||||||||| |||||||||||||||||   ||||||| ||| || | | |||||||||||       
T  45359049 ttgtttcaaaatgactgtcattttcaattttcaatgcaataataattttttcttttcaattgtatttttcaattaatattatatacactacttccaa--- 45358953  T
Q  101 attattattttttctttaatg 121  Q
    | |||||||||||||||||||    
T  45358952 agtattattttttctttaatg 45358932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 196
Target Start/End: Original strand, 13496240 - 13496428
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattatta 107  Q
    ||||||||||| | ||||| ||| || |||||||||||  ||||||||||||||||||  ||||||| |||||  | | |||||||||||| || |||||    
T  13496240 aaaatgaatgttattttcaatttccaatgcaataataacgttttcttttcaattgtacaattcaattaatactgtatacactacttccaaagtagtatta 13496339  T
Q  108 ttttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    ||||||||| || |         || ||| ||||||  ||||| |||||| ||||  || | |||||||||||||||||| ||||||||    
T  13496340 ttttttcttgaaagaaaaacaaaccaataattgattaggataatttggtaaaataacatctttctttcttttaattaatgcatttctta 13496428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 15750435 - 15750292
Alignment:
Q  54 tttcaattgtacccttcaattgata---ctaaacaaactacttccaaaatattattattttttctttaatgnnnnnnnnnccgatagttgattcagataa 150  Q
    ||||||||||||||||||||| |||   ||| | | |||||||||||| |||||||  |||||||||||||         || ||||||||||  |||||    
T  15750435 tttcaattgtacccttcaattaataatactatatacactacttccaaagtattatt--tttttctttaatgaaaaataaaccaatagttgattaggataa 15750338  T
Q  151 cttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
     |||||| |||| ||| |||||||||||||||||||||||||||||    
T  15750337 tttggtaaaataatatctctctttcttttaattaatgtatttctta 15750292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9880656 - 9880576
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| |||||||||||||||  |||||| || |||||||||||| |||||||||||||| | |||||||||| ||||||    
T  9880656 ttgtttcaaaatgaatgtcactcacagtttccaatgcaataataattttttcttttcaattatgcccttcaattaatacta 9880576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 29025901 - 29025821
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| |||| |||||||||||| ||||| || |||||||||||  |||||||||||||| |||||||||||| ||||||    
T  29025901 ttgtttcaaaacgaatgtcactttaagtttccaatgcaataataactttttcttttcaattctacccttcaattaatacta 29025821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 7839456 - 7839574
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||| ||||||||||||||||||| ||| || |||||||||||  |||||||||||||| |||| ||||||| ||| ||    | |||||||||||||    
T  7839456 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataaccttttcttttcaattttacctttcaattaatattatgttacactacttccaaaa 7839555  T
Q  100 tattattattttttctttaatg 121  Q
       |||||||||||||||||||    
T  7839556 ---tattattttttctttaatg 7839574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9812171 - 9812242
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaa 72  Q
    ||||||||||||||||||||||||||||||  | |||||||||||  |||| |||||||||||||| |||||    
T  9812171 ttgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttattttcaattgtacctttcaa 9812242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 31899395 - 31899330
Alignment:
Q  9 aaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||| || ||||||||||||| || |||||||||||| |||||||||||||||||| ||||||||    
T  31899395 aaatggatatcactttcagtttccaatgcaataataattttttcttttcaattgtactcttcaatt 31899330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 34796833 - 34796723
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| |||||||||||  |||| |||||  | |||||||||||| ||||||||||||||| ||||||||||| ||  || | | |||||||||||| |    
T  34796833 ttgtttcaaaatgaatgttccttttagtttctaatgcaataataattttttcttttcaattgaacccttcaattaat--tatatacactacttccaaagt 34796736  T
Q  101 attattatttttt 113  Q
    |||||| ||||||    
T  34796735 attattttttttt 34796723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44713532 - 44713605
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||||||| ||||||||| ||| || |||||||||||  |||| ||||||||| ||||||||||||    
T  44713532 ttgttttaaaatgaatatcactttcattttccaatgcaataataacttttttttttcaattatacccttcaatt 44713605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 396369 - 396301
Alignment:
Q  1 ttgttttaaaatgaatgtcacttt-cagttttcattgcaataataatattttcttttcaattgtaccct 68  Q
    |||||||||||||||||||||||| ||||||  | |||||||||||  |||||||||||||||||||||    
T  396369 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttcttttcaattgtaccct 396301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 12339712 - 12339810
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttctttt--caattgtacccttcaattgatactaaacaaactacttccaaaata 101  Q
    ||||||||||||||||| ||| |||||||| | |||||||||| |||||||||  ||||||||| || ||||| ||| || ||| |||||||||||||||    
T  12339712 ttttaaaatgaatgtcatttttagttttcaatacaataataat-ttttctttttccaattgtacactccaattaatagtatacacactacttccaaaata 12339810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 19574392 - 19574503
Alignment:
Q  9 aaatgaatgtcactttcagtttt-cattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaatattatt 106  Q
    |||| ||||||||| |||||||  || || ||||||||  ||||||||||||||||||||||||||| |||||| |  | |||||||||||||   ||||    
T  19574392 aaataaatgtcactctcagtttcgcaatgtaataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaaa---tatt 19574488  T
Q  107 attttttctttaatg 121  Q
    |||||||||||||||    
T  19574489 attttttctttaatg 19574503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 43724379 - 43724483
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttctt-ttcaattgtacccttcaattgatactaaacaaactacttccaaaa 99  Q
    |||||| ||||||||| ||||||||||||| || |||||||||||| |||| || |||||||||||| | ||||| |||||   || |||||||||| ||    
T  43724379 ttgtttcaaaatgaatttcactttcagtttccaatgcaataataatttttttttcttcaattgtaccttccaattaatactctgcacactacttccataa 43724478  T
Q  100 tatta 104  Q
    |||||    
T  43724479 tatta 43724483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 13368068 - 13367986
Alignment:
Q  36 gcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattattattttttctttaatg 121  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| || | | |||||||||||   | |||||||||||||||||||    
T  13368068 gcaataataacattttcttttcaattgcacccttcaattaatattatatacactacttccaa---agtattattttttctttaatg 13367986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 35356312 - 35356378
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||| ||| ||||||||| || |||||||||||  |||||||||||||| ||||||||||||    
T  35356312 aaaatgaatatcattttcagtttccaatgcaataataactttttcttttcaattatacccttcaatt 35356378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 40400126 - 40400066
Alignment:
Q  6 ttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacc 66  Q
    ||||||||||||| ||||| ||||| || ||||| |||||| |||||||||||||||||||    
T  40400126 ttaaaatgaatgtgacttttagtttccaatgcaacaataattttttcttttcaattgtacc 40400066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 40400441 - 40400505
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacc 66  Q
    ||||||||||||||||||||||| |||||  | |  ||||||||| |||||||||||||||||||    
T  40400441 tgttttaaaatgaatgtcacttttagtttctaatataataataattttttcttttcaattgtacc 40400505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 17655906 - 17655984
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    |||||| ||||| ||||| || ||||||||||| |||||||||||  |||||||||||| |||||||| ||||| |||||    
T  17655906 ttgtttcaaaat-aatgttaccttcagttttcaatgcaataataactttttcttttcaactgtaccctccaattaatact 17655984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 43561341 - 43561382
Alignment:
Q  5 tttaaaatgaatgtcactttcagttttcattgcaataataat 46  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  43561341 tttaaaatgaatgtcaccttcagttttcaatgcaataataat 43561382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 43974939 - 43974886
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaatt 61  Q
    ||||||||||||||||| ||||| || |||||||||||  ||||||||||||||    
T  43974939 aaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaatt 43974886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 40399902 - 40399840
Alignment:
Q  134 atagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    ||||||||||  ||||| |||||| ||||  || |||||||||||||||||||| ||||||||    
T  40399902 atagttgattatgataatttggtaaaataacatatctctttcttttaattaatgcatttctta 40399840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 6e-30; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 24133283 - 24133166
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||| |||| |||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| |||||| | | ||||| ||||||||    
T  24133283 ttgttttaaactgaacgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactatatatactacatccaaaat 24133184  T
Q  101 attattattttttctttaatg 121  Q
    ||   ||||||||||||||||    
T  24133183 at---tattttttctttaatg 24133166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 1031153 - 1031269
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| |||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||||| |||||||| |||||| | | |||||||||||       
T  1031153 ttgtttcaaaatgaatgtcaccttcagtttccattgcaataataacattttattttcaattgtactcttcaattaatactatatacactacttccaa--- 1031249  T
Q  101 attattattttttctttaat 120  Q
    ||||||||||||||||||||    
T  1031250 attattattttttctttaat 1031269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 10476137 - 10476239
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    ||||||||||||||||||||||| ||| || |||||||||||  ||||||||||||||||||||||||||| |||||| | | |||||||||||| ||||    
T  10476137 ttttaaaatgaatgtcactttcactttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactacttccaaagtatt 10476236  T
Q  104 att 106  Q
    |||    
T  10476237 att 10476239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 28289220 - 28289401
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattatta 107  Q
    ||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||| ||||||||| |||||| | | ||||||| |||| ||||||      
T  28289220 aaaataaatgtcactttgagttttcaatgcaataataacattttcttttcaattgta-ccttcaattaatactatatacactactttcaaagtattat-- 28289316  T
Q  108 ttttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtattt 192  Q
    ||||||||||||||         || ||||||||||  ||||| |||||| ||||  || ||||||| |||||||||||||||||    
T  28289317 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacatctctctttattttaattaatgtattt 28289401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 48843550 - 48843668
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||| ||||||| | || |||||| | | |||||||||||  |    
T  48843550 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttctcttcaattatacccttaatttaatactatatacactacttccaacgt 48843649  T
Q  101 attattattttttctttaatg 121  Q
    |||||  ||||||||||||||    
T  48843650 attat--ttttttctttaatg 48843668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19105154 - 19105074
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||||||||||||||||||||||| | |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  19105154 ttgttttaaaatgaatgtcactttcagtttttaatgcaataataactttttcttttcaattgtacccttcaattaatacta 19105074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 42285906 - 42286009
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||||||||||| ||||||||| || |||||||||||| |||||||||||||| |||||||||||| ||||||  || || ||||||||| |    
T  42285906 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataattttttcttttcaattatacccttcaattaatactatgcacacaacttccaaagt 42286005  T
Q  101 atta 104  Q
    ||||    
T  42286006 atta 42286009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 30312459 - 30312561
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    |||||||||||||||||||||| ||||||| | |||||||||| ||||||||||||||||||||||||||| ||| |  | | |||||||||||| ||||    
T  30312459 ttttaaaatgaatgtcactttcggttttcaatacaataataattttttcttttcaattgtacccttcaattaatattgtatacactacttccaaagtatt 30312558  T
Q  104 att 106  Q
    |||    
T  30312559 att 30312561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27947654 - 27947581
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||| |||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||    
T  27947654 ttgtcttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaatt 27947581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29531088 - 29531015
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||| |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  29531088 ttgttttgaaatgaatgtcattttcagttttcaatgcaataataattttttcttttcaattgtacccttcaatt 29531015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 37490789 - 37490862
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  37490789 aaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtacctttcaattaatacta 37490862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 40753581 - 40753476
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||| |||||||||||||| |||||||||||| || ||||||||| ||||||||||||||||||| ||||||| |||||| | | ||||||| |||| |    
T  40753581 ttgttataaaatgaatgtcattttcagttttcaatgtaataataattttttcttttcaattgtaccattcaattaatactatatacactactttcaaagt 40753482  T
Q  101 attatt 106  Q
    ||||||    
T  40753481 attatt 40753476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1741989 - 1742069
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  1741989 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttcttttcaattgtacccttcaattaatacta 1742069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13405280 - 13405200
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||||||||||||||| || || ||||||||  ||||||||||||||||||||||||||| ||||||    
T  13405280 ttgttttaaaatgaatgtcactttcagtttccaatgtaataataactttttcttttcaattgtacccttcaattaatacta 13405200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 34012159 - 34012259
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||||||||||||||| ||||| || || | ||||||  |||| |||||||||||||||||||||| |||||| | ||||||||||||||||    
T  34012159 ttgttttaaaatgaatgtcactttaagtttccaatgtactaataacttttttttttcaattgtacccttcaattaatactatataaactacttccaaaat 34012258  T
Q  101 a 101  Q
    |    
T  34012259 a 34012259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42880087 - 42880007
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| |||||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||||||||| ||||||    
T  42880087 ttgtttcaaaatgaatgtcactttcagttttcaatgtaataataactttttcttttcaattgtacccttcaattaatacta 42880007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 45948783 - 45948703
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  45948783 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatacta 45948703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 716016 - 715937
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    |||||| ||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| ||||| |||||    
T  716016 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctccaattaatact 715937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 8603973 - 8604078
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||||||||||| |||||||||| ||| || |||||||||||  |||||||||||||  |||||||||||| |||||| | | |||||||||||| |    
T  8603973 ttgttttaaaatgaacgtcactttcaatttccaatgcaataataactttttcttttcaatgatacccttcaattaatactatatacactacttccaaagt 8604072  T
Q  101 attatt 106  Q
    ||||||    
T  8604073 attatt 8604078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 31930010 - 31929910
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    ||||||||||||| | | |||||||||||| |||||||||||| ||||||||||||||||||||| ||||| |||||   || |||||||||||| ||||    
T  31930010 ttttaaaatgaatattattttcagttttcaatgcaataataattttttcttttcaattgtaccctccaattaatactttgcacactacttccaaagtatt 31929911  T
Q  104 a 104  Q
    |    
T  31929910 a 31929910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 41137726 - 41137806
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| | |||||||| |||||| ||||| || |||||||||||| ||||||||||||||||||||||||||||||||||    
T  41137726 ttgtttcacaatgaatgccacttttagtttccaatgcaataataattttttcttttcaattgtacccttcaattgatacta 41137806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 34274792 - 34274895
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||| ||||||||||| ||||| |||||  ||| ||||| |||||| |    
T  34274792 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctttttaattgtaccctccaattaatactctacacactacatccaaagt 34274891  T
Q  101 atta 104  Q
    ||||    
T  34274892 atta 34274895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 40339457 - 40339649
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||| ||||||| ||||||||||| |||||| |||||||||||  |||  |||||||||||||||||||||| ||| ||  | | |||||||||||      
T  40339457 ttgtttcaaaatgactgtcactttcaattttcaatgcaataataa-ctttatttttcaattgtacccttcaattaatattattatacactacttccaa-- 40339553  T
Q  100 tattattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
     | |||| ||||||||||||||         || ||||||||||  ||||| |||||| ||||  ||||||||||||||||||||||| ||||||||    
T  40339554 -agtattcttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacatttctctttcttttaattaatgcatttctta 40339649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 44567194 - 44567091
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||||||||||||||||| |||||| |||||||||||  ||||||||||||||||| | | ||||| |||||   || |||||||||||| |    
T  44567194 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataaatttttcttttcaattgtatcatccaattaatactttgcacactacttccaaagt 44567095  T
Q  101 atta 104  Q
    ||||    
T  44567094 atta 44567091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 45933737 - 45933661
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||||||||||||||||||||||||| |||||||||    ||||||||||||||| ||||||||||| ||||||    
T  45933737 ttgttttaaaatgaatgtcactttcagttttcaatgcaataat----ttttcttttcaattgcacccttcaattaatacta 45933661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 45499980 - 45499784
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||| ||||||||||||| || ||| ||||||||||||||||||||| ||| || ||||||| ||| || ||  ||||||| |||| |    
T  45499980 ttgtttcaaaatgaatttcactttcagtttccaatgccataataatattttcttttcaaatgtgcctttcaattaatattatac-tactactttcaaagt 45499882  T
Q  101 attatta-ttttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattat-ttctctttcttttaattaatgtatttctta 196  Q
    ||||||| ||||||||||||||         || |||||| |||  ||||| |||||| ||||  ||  ||||||| |||||||||||||||||||||    
T  45499881 attattatttttttctttaatgaaaaacaaaccaatagttaattaggataatttggtaaaatagcatcatctctttattttaattaatgtatttctta 45499784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 6563563 - 6563379
Alignment:
Q  5 tttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatta 104  Q
    ||||||||||| ||||||||||||||| | |  ||||||||  ||||||||||||||||||||||||||| ||| || |     |||||||||| |||||    
T  6563563 tttaaaatgaacgtcactttcagtttttaatttaataataactttttcttttcaattgtacccttcaattaatattata-----tacttccaaagtatta 6563469  T
Q  105 ttattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    |  ||||||||||||||         || || |||||||  ||||| ||| || ||||  || |||||||||||||||||||||||||||||    
T  6563468 t--ttttttctttaatgaaaaacaaaccaatggttgattaggataatttgataaaataacatgtctctttcttttaattaatgtatttctta 6563379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24680126 - 24680199
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||||||||||| ||||||||| || |||||||||||  |||||||||||||||||||||| ||||    
T  24680126 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctttaatt 24680199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22297994 - 22298074
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  |||||||||||| ||||||||||| || ||||||    
T  22297994 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaactgtacccttcagttaatacta 22298074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 25440873 - 25440973
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    |||||||||  |||||||||||||||| || |||||||||||  ||||||||||||||||||||| ||||| |||||   || |||||||||||| ||||    
T  25440873 ttttaaaatatatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagtatt 25440972  T
Q  104 a 104  Q
    |    
T  25440973 a 25440973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 37502324 - 37502420
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatta 104  Q
    |||||||| |||||||||||||| || |||||||||||  |||||||||||||| |||||| ||||| |||||   || ||||||||||||||||||    
T  37502324 aaaatgaacgtcactttcagtttccaatgcaataataactttttcttttcaattttaccctccaattaatactctgcacactacttccaaaatatta 37502420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 12977839 - 12977736
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||||||||| ||| || |||||||||||  ||||||||||||||||||| | ||||| |||||   || |||||||||||| |    
T  12977839 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtaccatccaattaatactctgcacactacttccaaagt 12977740  T
Q  101 atta 104  Q
    ||||    
T  12977739 atta 12977736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 27935765 - 27935883
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  |||| | |||||||||| | || |||| ||||||    |||||||||||||      
T  27935765 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttatcttcaattgtatcatttaattaatactacgttaaactacttccaa-- 27935862  T
Q  100 tattattattttttctttaatg 121  Q
     | |||||||||||||||||||    
T  27935863 -agtattattttttctttaatg 27935883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 21819282 - 21819469
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| |||||||| || | |||||||||||| | ||||||||| ||| | |||||||||||| | ||||||| |||||| | | | |||||||||||     
T  21819282 ttgtttcaaaatgaaagttattttcagttttcaatacaataataa-attcttttttcaattgtatcattcaattaatactatatacattacttccaaaa- 21819379  T
Q  101 attattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtattt 192  Q
      |||||||||||||||||||         || |||||| |||  ||||| |||||| ||||  || |||||||||||||||||||||||||    
T  21819380 --tattattttttctttaatgaaaaacaaaccaatagtttattaggataatttggtaaaataacatctctctttcttttaattaatgtattt 21819469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 44453136 - 44453213
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||| |||||||||||||||||||||| || |||||||||||  || | |||||||||||||||||||||| ||||||    
T  44453136 tttttaaatgaatgtcactttcagtttccaatgcaataataactttcttttttcaattgtacccttcaattaatacta 44453213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 48684728 - 48684801
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||| |||| || |||||||||||  ||||||||||||||||||| ||||||| ||||||    
T  48684728 aaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgtacctttcaattaatacta 48684801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31418666 - 31418586
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||| |||  |||||||||||| || |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  31418666 ttgtttcaaaataaattccactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatacta 31418586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 37815722 - 37815802
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| |||||||||||| |||||| ||| || | |||||||||| |||||||||||||| |||||||||||| ||||||    
T  37815722 ttgtttcaaaatgaatgtcgctttcaatttccaatacaataataattttttcttttcaattatacccttcaattaatacta 37815802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 6747225 - 6747327
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| |||| |||||||||||||||||| || |||||||||||  ||||||||| ||||||||||| ||||| |||||   || |||||||||||| |    
T  6747225 ttgtttaaaaacgaatgtcactttcagtttccaatgcaataataa-cttttctttttaattgtaccctccaattaatactctgcacactacttccaaagt 6747323  T
Q  101 atta 104  Q
    ||||    
T  6747324 atta 6747327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 10599212 - 10599275
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtac 65  Q
    ||||| ||||||||| |||||||||||||||| |||||||||||  ||||||||||||||||||    
T  10599212 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgtac 10599275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 33939887 - 33939769
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||||||||||||||||||||  |||| || || ||||||||  |||||||| |||||||||| ||||||| ||| || | | |||| ||||||| |    
T  33939887 ttgttttaaaatgaatgtcacttttggtttccaatgtaataataactttttctttccaattgtaccattcaattaatattatatacactaattccaaagt 33939788  T
Q  101 attattattttttctttaatg 121  Q
    ||||   ||||||||||||||    
T  33939787 atta--cttttttctttaatg 33939769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23935420 - 23935499
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||| ||||||  ||||||||| || |||||||||||  |||||||||||| |||||||||||||| ||||||    
T  23935420 ttgttttaaaataaatgtcgttttcagtttccaatgcaataataactttttcttttcaa-tgtacccttcaattaatacta 23935499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 18292333 - 18292436
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||||||||| ||| || |||||||||||  ||||| ||||||||||| | | ||||| |||||   || |||||||||||| |    
T  18292333 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcctttcaattgtatcatccaattaatactctgcacactacttccaaagt 18292432  T
Q  101 atta 104  Q
    ||||    
T  18292433 atta 18292436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 35777817 - 35777935
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||| ||||| |||||||||||| ||||  | |||||||||||  |||| ||||||||||||||||||||||  ||||| |  | |||||||||||      
T  35777817 ttgtttcaaaataaatgtcactttcggtttctaatgcaataataactttttattttcaattgtacccttcaattagtactatattacactacttccaa-- 35777914  T
Q  100 tattattattttttctttaatg 121  Q
     | |||||||||||||||||||    
T  35777915 -agtattattttttctttaatg 35777935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 2297036 - 2297146
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttct-----tttcaattgtacccttcaattgatactaaacaaactacttcc 95  Q
    |||||| |||||||||||||||||||||||||| ||||||||||   ||||||     |||||| |||||| | ||||| |||||   || |||||||||    
T  2297036 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataatatctttttcttttaatttcaactgtaccatccaattaatactctgcacactacttcc 2297135  T
Q  96 aaaatattatt 106  Q
    |||||||||||    
T  2297136 aaaatattatt 2297146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 18270582 - 18270679
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttc-ttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatta 104  Q
    ||||||||||||||||||||||| || |||||||||||  |||||  ||||||||||||||| ||||| ||| |   || |||||||||||| |||||    
T  18270582 aaaatgaatgtcactttcagtttccaatgcaataataactttttcactttcaattgtaccctccaattaatattctgcacactacttccaaagtatta 18270679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 33682543 - 33682624
Alignment:
Q  17 gtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaa 98  Q
    ||||||||||  ||||| |||||||||||| ||| |||||||||| |||||||||||| |||||  | | ||||||||||||    
T  33682543 gtcactttcaagtttcaatgcaataataatttttccttttcaattttacccttcaattaatactttatacactacttccaaa 33682624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36807933 - 36808006
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||| ||||||| ||||  |||||| | |||||||||  |||||||||||||||||| ||||||||    
T  36807933 ttgttttaaaataaatgtcattttcgcttttcaatacaataataactttttcttttcaattgtactcttcaatt 36808006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 39557323 - 39557380
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaatt 61  Q
    ||||||||| |||||||||||||||||||| || ||||||||| |||||| |||||||    
T  39557323 ttttaaaataaatgtcactttcagttttcaatgtaataataattttttctcttcaatt 39557380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24780459 - 24780399
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaatt 61  Q
    |||||| |||||||||||||||||||||||  | |||||||||||| |||| |||||||||    
T  24780459 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttattttcaatt 24780399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 21752257 - 21752191
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||| ||||||| ||||||||| || |||||||||||  ||||| ||||||||||||| |||||||    
T  21752257 aaaataaatgtcattttcagtttccaatgcaataataactttttcgtttcaattgtaccattcaatt 21752191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42753706 - 42753771
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacc 66  Q
    |||||| ||||||||||||||||||| ||| || | ||||||||| | |||||||||||| |||||    
T  42753706 ttgtttcaaaatgaatgtcactttcaatttccaatacaataataacactttcttttcaatcgtacc 42753771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32501902 - 32501858
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataa 45  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||    
T  32501902 ttgttttaaaataaatatcactttcagttttcaatgcaataataa 32501858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 4268609 - 4268715
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttc-ttttcaattgtacccttcaattgatactaaacaaactacttccaaaa 99  Q
    |||||| |||||||||||| |||||| ||| || || ||||||| | ||||  |||||||||||||| | ||||| |||||| | | | ||||||||||     
T  4268609 ttgtttcaaaatgaatgtcgctttcaatttccaatgtaataatattttttttgttttcaattgtaccttccaattaatactatatatattacttccaaat 4268708  T
Q  100 tattatt 106  Q
    |||||||    
T  4268709 tattatt 4268715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 34012585 - 34012647
Alignment:
Q  134 atagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    ||||||||||  ||||| |||||| ||||  |||| |||||||||||||||||| ||||||||    
T  34012585 atagttgattaggataatttggtaaaataacatttatctttcttttaattaatggatttctta 34012647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 40927163 - 40927205
Alignment:
Q  3 gttttaaaatgaatgtcactttcagttttcattgcaataataa 45  Q
    |||| ||||||||||||||||||||||| || |||||||||||    
T  40927163 gtttcaaaatgaatgtcactttcagtttccaatgcaataataa 40927205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 29636373 - 29636262
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataa-tattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattatt 106  Q
    ||||| |||||||||||||||||  | ||||||||||| |  ||| |||||||||  | ||||||||| |||||| | | |||||||| ||   | ||||    
T  29636373 aaaataaatgtcactttcagtttctaatgcaataataacttcttttttttcaattacatccttcaattaatactatatacactacttctaa---agtatt 29636277  T
Q  107 attttttctttaatg 121  Q
    |||||||||||||||    
T  29636276 attttttctttaatg 29636262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 6e-30; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 7 - 192
Target Start/End: Original strand, 34534364 - 34534545
Alignment:
Q  7 taaaatgaatgtcactttcagttttcattgcaataataatatttt-cttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattat 105  Q
    ||||||||||||||||||||  || || |||||||||||| |||| ||||||||||||||||||||||| ||||||  || |||||||||||||   |||    
T  34534364 taaaatgaatgtcactttca--ttccaatgcaataataatttttttcttttcaattgtacccttcaattaatactatgcacactacttccaaaa---tat 34534458  T
Q  106 tattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtattt 192  Q
    ||||||||||||||||         || ||||||||||  ||||| |||||| |||| ||| |||||||||||||||||||| ||||    
T  34534459 tattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataatatctctctttcttttaattaatgcattt 34534545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 3306161 - 3306085
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    ||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| |||||    
T  3306161 ttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatact 3306085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26660753 - 26660833
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||||||||||| |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  26660753 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattgtacccttcaattaatacta 26660833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26932346 - 26932426
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||||||||||| |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  26932346 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattgtacccttcaattaatacta 26932426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 192
Target Start/End: Original strand, 27797782 - 27797962
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    ||||||||||||||||||||||||||| || |||||||||||  |||||||||||||||||||||||| || |||||  | | | |||||||||| ||||    
T  27797782 ttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcagttaatact--atatattacttccaaagtatt 27797879  T
Q  104 attattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtattt 192  Q
    |    |||||||||||||         || |||||||||| |||||| |||||| ||||  |||  |||||||||||||||||||||||    
T  27797880 a----tttttctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaataacatt--tctttcttttaattaatgtattt 27797962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39566181 - 39566254
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||||||||||||||||||||| || |||||||||||  |||||||||||||||||||||||||||    
T  39566181 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaatt 39566254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6518974 - 6519054
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  6518974 ttgtttcaaaatgaatgtcgctttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatacta 6519054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13761555 - 13761635
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||||| |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  13761555 ttgtttcaaaatgaatgtcactttcacttttcaatgcaataataaatttttcttttcaattgtacccttcaattaatacta 13761635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34446182 - 34446102
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||| |||||||||||| | ||||||||| |||||||||||||||||||||||||||| ||||||    
T  34446182 ttgtttcaaaatgaatgtcattttcagttttcaatacaataataacattttcttttcaattgtacccttcaattaatacta 34446102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 10345087 - 10344984
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||| ||||| |||||   || |||||||||||| |    
T  10345087 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagt 10344988  T
Q  101 atta 104  Q
    ||||    
T  10344987 atta 10344984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 36164888 - 36165001
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    ||||||||||||||||| ||||||||| || |||| ||||||  |||||||||||||| |||||||||||| |||||| | | | |||||||||||||||    
T  36164888 ttttaaaatgaatgtcattttcagtttccaatgcagtaataactttttcttttcaattatacccttcaattaatactatatacattacttccaaaatatt 36164987  T
Q  104 attattttttctttaat 120  Q
       ||||||||||||||    
T  36164988 ---attttttctttaat 36165001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 15167164 - 15167049
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaata 101  Q
    ||||| |||||||||||||||||||||||||| |||||||||||  |||| ||||||||| ||| ||||||||  ||||| | | |||||||||||||      
T  15167164 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataa-ctttttttttcaattttactcttcaattattactatatacactacttccaaaa-- 15167068  T
Q  102 ttattattttttctttaatg 121  Q
     |||||||||||||||||||    
T  15167067 -tattattttttctttaatg 15167049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 4630866 - 4630966
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    ||||||||| |||||||||||||||||||| | |||||||||  ||||||||||||||||| ||| ||||| |||||  ||| |||||||||||| ||||    
T  4630866 ttttaaaataaatgtcactttcagttttcaatacaataataactttttcttttcaattgtatcctccaattaatactttacacactacttccaaagtatt 4630965  T
Q  104 a 104  Q
    |    
T  4630966 a 4630966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42104218 - 42104138
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  |||||||||||||| |||||||||||| ||||||    
T  42104218 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattttacccttcaattaatacta 42104138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 43584532 - 43584428
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataa-tattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaa 99  Q
    |||||||||||||||||||  |||||||||||| ||||||||||| | |||||||||||||| |||||| ||||| |||||   || |||||||||||||    
T  43584532 ttgttttaaaatgaatgtcgttttcagttttcaatgcaataataacttttttcttttcaattataccctccaattaatactctgcacactacttccaaaa 43584433  T
Q  100 tatta 104  Q
    |||||    
T  43584432 tatta 43584428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7317026 - 7317105
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||| ||||| |||||    
T  7317026 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatact 7317105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2729941 - 2729868
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| ||||||||||||||||||| ||| || |||||||||||  |||||||||||||||||||||||||||    
T  2729941 ttgtttcaaaatgaatgtcactttcactttccaatgcaataataactttttcttttcaattgtacccttcaatt 2729868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7580024 - 7579951
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||||||||| |||||||||||||| | |||||||||  |||||||||||||||||| ||||||||    
T  7580024 ttgttttaaaatgaatgttactttcagttttcaatacaataataactttttcttttcaattgtactcttcaatt 7579951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21319465 - 21319392
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| |||||||||||||||||||| || || |||||||||||  |||||||||||||||||||||||||||    
T  21319465 ttgtttcaaaatgaatgtcactttcagcttccaatgcaataataactttttcttttcaattgtacccttcaatt 21319392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21375806 - 21375726
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||| |||||||||||||||||||| ||||| |||  | |||| |||||||||||||||||||||| ||||||    
T  21375806 ttgttttaaaataaatgtcactttcagttttcaatgcaaaaattttttttttttttcaattgtacccttcaattaatacta 21375726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3025086 - 3025007
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    |||||| ||||||||||||||||| ||||| || |||||||||||  ||||||||||||||||||||| ||||| |||||    
T  3025086 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatact 3025007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 196
Target Start/End: Original strand, 11977593 - 11977778
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattatta 107  Q
    |||| |||||||||||||||||| || | | |||||||  ||||||||||||||||| |||| |||| ||| || | | |||||||||||   | |||||    
T  11977593 aaaacgaatgtcactttcagtttccaataccataataactttttcttttcaattgtatcctttaattaatattatatacactacttccaa---agtatta 11977689  T
Q  108 ttttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    ||||||||||||||         || ||||||||||  ||||| |||||| || |  || |||||||||||||||||||| ||||||||    
T  11977690 ttttttctttaatgaacaacaaaccaatagttgattaggataatttggtaaaacaacatctctctttcttttaattaatgcatttctta 11977778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 21195384 - 21195475
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaa 99  Q
    ||||||| ||||| ||| ||||| || |||||||||||| ||||||||||||||||||||||||||| |||||| | | |||||||| ||||    
T  21195384 aaaatgattgtcaatttaagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactatatacactacttctaaaa 21195475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 39504720 - 39504838
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaa-taataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaa 98  Q
    |||||||||||||||||||||||||||||| || ||||| ||||||  ||||||||||||||||| |||| |||| ||| ||    | ||||||||||||    
T  39504720 ttgttttaaaatgaatgtcactttcagtttccaatgcaattaataactttttcttttcaattgtatcctttaattaatattatgttacactacttccaaa 39504819  T
Q  99 atattattattttttcttta 118  Q
    |||||||| |||||||||||    
T  39504820 atattatt-ttttttcttta 39504838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 14620642 - 14620576
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||| |||||||    
T  14620642 aaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacctttcaatt 14620576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 8336557 - 8336445
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaatattatt 106  Q
    |||||||||||||||| || |||||| |||||||||||  | || ||||||||||||| |||||||| ||||||    | ||||||||||||||||||||    
T  8336557 aaaatgaatgtcacttccatttttcaatgcaataataacttctttttttcaattgtactcttcaattaatactatgttacactacttccaaaatattatt 8336458  T
Q  107 attttttctttaat 120  Q
     |||||||||||||    
T  8336457 -ttttttctttaat 8336445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9066578 - 9066505
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||| ||||| | |||||||    
T  9066578 ttgtttcaaaatgaatgttactttcagttttcaatgcaataataaaattttcttttcatttgtagcattcaatt 9066505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24280991 - 24281055
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtac 65  Q
    |||||| ||||||||||||||||| ||||| || |||||||||||| ||||||||||||||||||    
T  24280991 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttcttttcaattgtac 24281055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24381221 - 24381157
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtac 65  Q
    |||||| ||||||||||||||||| ||||| || |||||||||||| ||||||||||||||||||    
T  24381221 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttcttttcaattgtac 24381157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 35766048 - 35765976
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    |||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||| | ||||| |||||    
T  35766048 aaaatgaatgtcactttcagttttcaatacaataataactttttcttttcaattgtaccgtccaattaatact 35765976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 34209052 - 34208930
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttc---attgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttcca 96  Q
    |||||| ||||||||||||||||||||||| |   | |||||||||||  |||| ||||||||| |||||||||||| ||| || |  | ||||||||||    
T  34209052 ttgtttcaaaatgaatgtcactttcagtttccaataatgcaataataacttttttttttcaattatacccttcaattaatattatattacactacttcca 34208953  T
Q  97 aaatattattattttttctttaatg 121  Q
    |||||||||  ||||||||||||||    
T  34208952 aaatattat--ttttttctttaatg 34208930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 13974278 - 13974464
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    ||||||||||||||||||||| ||    || |||||||||||| || |||||||||||||||| |||||||  || || | |  ||||||||||||||||    
T  13974278 ttttaaaatgaatgtcacttttag----caatgcaataataattttatcttttcaattgtaccattcaattattattatatatgctacttccaaaatatt 13974373  T
Q  104 attattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    |   ||||||||||||||         |  ||||||||||  ||||| |||||| ||||  |  |||||||||||||||||||| ||||||||    
T  13974374 a--cttttttctttaatggaaaacaaacaaatagttgattaggataatttggtaaaataacacctctctttcttttaattaatgcatttctta 13974464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 42662091 - 42662015
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||||||| | ||| |||||||| || ||||||||| |||| |||||||||||||||||||||| ||||||    
T  42662091 ttttaaaatgaatgttatttttagttttcaatgtaataataatttttt-ttttcaattgtacccttcaattaatacta 42662015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 27600397 - 27600477
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||| ||| |  |||||||||| || |||||||||||  |||||||||||||| |||||||||||| ||||||    
T  27600397 ttgttttaaaataaatattgctttcagtttccaatgcaataataactttttcttttcaattatacccttcaattaatacta 27600477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 14162056 - 14161938
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaa-ttgtacccttcaattgatactaaacaaactacttccaaaa 99  Q
    |||| ||||||| ||||||| |||  ||||  | |||||||||||| |||||||||||| ||||||| ||||||| |||||| | | |||||||||||      
T  14162056 ttgtattaaaataaatgtcattttaggtttctaatgcaataataattttttcttttcaatttgtaccattcaattaatactatatacactacttccaa-- 14161959  T
Q  100 tattattattttttctttaatg 121  Q
     | |||||||||||||||||||    
T  14161958 -agtattattttttctttaatg 14161938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 25362955 - 25362852
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||| |||||||||||  | ||||||||| |  |||||||||||||| |||||| ||||| |||||   || |||||||||||| |    
T  25362955 ttgtttcaaaatgaatgttactttcagtttcgaatgcaataatgactttttcttttcaattttaccctccaattaatactctgcacactacttccaaagt 25362856  T
Q  101 atta 104  Q
    ||||    
T  25362855 atta 25362852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 38362291 - 38362213
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    ||||| ||||||||||||||||||| |||||| |||||||||||  ||| |||||||||| ||||| | |||| |||||    
T  38362291 tgtttcaaaatgaatgtcactttcaattttcaatgcaataataacttttccttttcaattatacccataaattaatact 38362213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 38369871 - 38369980
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||||||| ||||||| | ||| || |||||||||||  ||||||||| |||||||| |||||||| ||| || | | ||||||| |||| |    
T  38369871 ttgttttaaaatgaatatcactttta-tttccaatgcaataataactttttcttttaaattgtactcttcaattaatattatatacactactttcaaagt 38369969  T
Q  101 attattatttt 111  Q
    |||||| ||||    
T  38369970 attattttttt 38369980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 4424975 - 4425090
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||||||||| ||| |||||||| ||||||| |   | || ||||||||||||||||||||||| ||||||| |||||| |  | |||||||||||      
T  4424975 ttgttttaaaataaatatcactttcggttttcaat---aaaacaatattttcttttcaattgtacctttcaattaatactatattacactacttccaa-- 4425069  T
Q  100 tattattattttttctttaatg 121  Q
     | |||||||||||||||||||    
T  4425070 -agtattattttttctttaatg 4425090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 29807469 - 29807359
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataata--ttttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaat 100  Q
    ||||||||||||||| ||||| |||||  | ||||||||||  |  ||||||||||||||||||| ||||||| ||||||    | ||||||||||||||    
T  29807469 ttttaaaatgaatgttactttgagtttctaatgcaataatataactttttcttttcaattgtaccattcaattaatactatgttacactacttccaaaat 29807370  T
Q  101 attattatttt 111  Q
    |||||| ||||    
T  29807369 attattttttt 29807359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 42978220 - 42978177
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataa 45  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  42978220 tgttttaaaatgaatatcactttcagttttcaatgcaataataa 42978177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 24281098 - 24281199
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    ||||||||||||| ||||||| |||||| | |||| ||||||| ||||| ||||||||||| | || |||| |||||| ||| | ||||| |||| ||||    
T  24281098 ttttaaaatgaatatcacttttagtttttaatgcactaataattttttcatttcaattgta-catttaattaatactatacacaatactttcaaagtatt 24281196  T
Q  104 att 106  Q
    |||    
T  24281197 att 24281199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 24381113 - 24381012
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    ||||||||||||| ||||||| |||||| | |||| ||||||| ||||| ||||||||||| | || |||| |||||| ||| | ||||| |||| ||||    
T  24381113 ttttaaaatgaatatcacttttagtttttaatgcactaataattttttcatttcaattgta-catttaattaatactatacacaatactttcaaagtatt 24381015  T
Q  104 att 106  Q
    |||    
T  24381014 att 24381012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 36073777 - 36073703
Alignment:
Q  9 aaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaa 83  Q
    |||||||||||| ||| | |||||| |||||||||||  ||||||||||||||||| | ||||||| ||| ||||    
T  36073777 aaatgaatgtcattttaaattttcaatgcaataataactttttcttttcaattgtatcattcaattaatattaaa 36073703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4911305 - 4911233
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaat 73  Q
    |||||| ||||| ||||||||||| ||||| || || |||||||   |||||||||||| |||||||||||||    
T  4911305 ttgtttcaaaataaatgtcacttttagtttccaatgtaataatacctttttcttttcaactgtacccttcaat 4911233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 891154 - 891095
Alignment:
Q  16 tgtcactttcagttttcattgcaataataatattttc-ttttcaattgtacccttcaatt 74  Q
    ||||||||||| |||||| || ||||||||| ||||| |||||||||||||| |||||||    
T  891154 tgtcactttcacttttcaatgtaataataattttttctttttcaattgtaccattcaatt 891095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 40776728 - 40776657
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataa-tattttcttttcaattgtacccttcaatt 74  Q
    ||||||| ||||||||||||||| |||||| || |||||||| | |||| ||| |||||||||||| |||||    
T  40776728 ttttaaattgaatgtcactttcatttttcaatgtaataataacttttttatttccaattgtaccctccaatt 40776657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 25768584 - 25768515
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||| ||||||||||||||||||| || |||| |||  ||||||||| ||||||| ||| |||||    
T  25768584 ttttaaaatggatgtcactttcagttttcaatgtaatattaa-cttttctttttaattgtatcctccaatt 25768515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 39335321 - 39335279
Alignment:
Q  39 ataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||  ||||||||||||||||||||||||||| ||||||    
T  39335321 ataataactttttcttttcaattgtacccttcaattaatacta 39335279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 39729964 - 39730017
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaatt 61  Q
    ||||||||||| | ||||||||| || |||||||||||  ||||||||||||||    
T  39729964 aaaatgaatgttattttcagtttccaatgcaataataactttttcttttcaatt 39730017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 1309479 - 1309396
Alignment:
Q  35 tgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattattattttttctttaatg 121  Q
    |||||||||||| ||||||||| || |||||| ||||||| ||| || | | ||||||| ||| |   |||||||||||||||||||    
T  1309479 tgcaataataattttttctttttaagtgtacctttcaattaatattatatacactacttacaaca---tattattttttctttaatg 1309396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7721094 - 7721165
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaat 73  Q
    |||||| ||||||||| |||||||  ||||||| |||||||||||  |||| |||||||||||| | ||||||    
T  7721094 ttgtttcaaaatgaatatcactttatgttttcaatgcaataataa-ctttttttttcaattgtatcattcaat 7721165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31041925 - 31041969
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataa 45  Q
    |||| ||||||||| ||||||||||||||| || |||||||||||    
T  31041925 ttgtattaaaatgattgtcactttcagtttccaatgcaataataa 31041969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 6e-30; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 18579165 - 18579282
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| |||||| | | |||||||||||       
T  18579165 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgcacccttcaattaatactatatacactacttccaa--- 18579261  T
Q  101 attattattttttctttaatg 121  Q
    | ||| |||||||||||||||    
T  18579262 agtataattttttctttaatg 18579282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 37038921 - 37038732
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||     |||||||||||||| |||||||||||| ||| || | | ||||||| |||       
T  37038921 ttgttttaaaatgaatgtcactttcagttttcaatgcaataact---ttttcttttcaattatacccttcaattaatattatatacactactttcaa--- 37038828  T
Q  101 attattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    | |||||||||||||||||||         || ||||||||||  ||||| |||||| ||||  || |||||||||||||||||||||||||||||    
T  37038827 agtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacatctctctttcttttaattaatgtatttctta 37038732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 18719587 - 18719470
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| |||||| | | |||| || |||       
T  18719587 ttgttttgaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactattttcaa--- 18719491  T
Q  101 attattattttttctttaatg 121  Q
    | |||||||||||||||||||    
T  18719490 agtattattttttctttaatg 18719470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 27964517 - 27964428
Alignment:
Q  9 aaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaa 98  Q
    |||||||||||||||| ||||| || |||||||||||  ||||||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  27964517 aaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatacacactacttccaaa 27964428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 29411694 - 29411799
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||  ||||||||| ||||||||||||||||| ||| || | | | ||||| ||||||    
T  29411694 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataaccttttctttttaattgtacccttcaattaatattatatacattactttcaaaat 29411793  T
Q  101 attatt 106  Q
    ||||||    
T  29411794 attatt 29411799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 441386 - 441306
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  441386 ttgtttcaaaatgaatgtcactttctgttttcaatgcaataataactttttcttttcaattgtacccttcaattaatacta 441306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 4658388 - 4658269
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||  ||||| |||||| || ||||||||| ||||||||||||||||||||||||||| |||||| | | ||||||| |||| |    
T  4658388 ttgtttcaaaatgaatgtctttttcatttttcaatgtaataataattttttcttttcaattgtacccttcaattaatactatatacactactttcaaagt 4658289  T
Q  101 attattattttttctttaatg 121  Q
    |||| | ||||||||||||||    
T  4658288 attaat-ttttttctttaatg 4658269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 38926604 - 38926684
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  | || |||||||||||||||||||||| ||||||    
T  38926604 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttctttttttcaattgtacccttcaattaatacta 38926684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 12342091 - 12342209
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||| |||||||||||||||||| |||| || |||||||||||  ||||||||||||||||||||||||||| ||||||    | |||||||||||||    
T  12342091 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaa 12342190  T
Q  100 tattattattttttctttaatg 121  Q
       |||||||||||||||||||    
T  12342191 ---tattattttttctttaatg 12342209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 45301763 - 45301842
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    |||||||||||||||||||||||||||||| || |||||||||||  |||||||||||||||||||| |||||| |||||    
T  45301763 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccatcaattaatact 45301842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 8540036 - 8540154
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||||||||||||| || ||||||||| || |||||||||||  ||||||||| ||||||||||||||||| ||| ||   | |||||||| |||||    
T  8540036 ttgttttaaaatgaatgacattttcagtttccagtgcaataataactttttctttttaattgtacccttcaattaatattatttacactacttctaaaat 8540135  T
Q  101 attattattttttctttaatg 121  Q
    |||||  ||||||||||||||    
T  8540136 attat--ttttttctttaatg 8540154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 36685895 - 36685790
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||||||||| ||||||| |||  | | |||||||||| ||||||||||||||||||||||||||| |||||| | | |||||||  |||||    
T  36685895 ttgttttaaaatgaatgttactttcaatttcaaatacaataataattttttcttttcaattgtacccttcaattaatactataaacactactttgaaaat 36685796  T
Q  101 attatt 106  Q
    ||||||    
T  36685795 attatt 36685790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 43427442 - 43427337
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||| ||||| |||||   ||  ||||||||||| |    
T  43427442 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactttgcacgctacttccaaagt 43427343  T
Q  101 attatt 106  Q
    ||||||    
T  43427342 attatt 43427337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 16463180 - 16463084
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatta 104  Q
    ||||| |||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||    || |||||||||||| |||||    
T  16463180 aaaataaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaataccctgcacactacttccaaagtatta 16463084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 45082046 - 45081982
Alignment:
Q  10 aatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||    
T  45082046 aatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaatt 45081982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 5717512 - 5717613
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaata 101  Q
    ||||||||||||||||||||||||||||| || |||||||||||  ||||||||| ||||||| ||| ||||| |||||  ||| |||||||||||| ||    
T  5717512 tgttttaaaatgaatgtcactttcagtttccaatgcaataataaatttttctttttaattgta-cctccaattaatactctacacactacttccaaagta 5717610  T
Q  102 tta 104  Q
    |||    
T  5717611 tta 5717613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16807672 - 16807594
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatac 79  Q
    |||||| ||||| ||||||||||| ||||| || |||||||||||| ||||||||||||||||||||||||||| ||||    
T  16807672 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatac 16807594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16846953 - 16846875
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatac 79  Q
    |||||| ||||| ||||||||||| ||||| || |||||||||||| ||||||||||||||||||||||||||| ||||    
T  16846953 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatac 16846875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29808810 - 29808880
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttca 71  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||  ||||||||||||| ||||||||||    
T  29808810 ttgttttaaaatgaatgtcactttcagttttcaatgcaatcataactttttcttttcaatcgtacccttca 29808880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4469499 - 4469572
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||||||| |||||||||||||||| | |||||||||  |||||||||||||||||||||| ||||    
T  4469499 ttgttttaaaatgaatttcactttcagttttcaatacaataataactttttcttttcaattgtacccttaaatt 4469572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12566135 - 12566062
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| ||||||||||||||||||||||| || |||||||||||| |||| |||||||||||||| |||||||    
T  12566135 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttttttttcaattgtaccattcaatt 12566062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34546486 - 34546413
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| ||||||||||||||||||| ||| || |||||||||||| ||||||||| |||||||||||||||||    
T  34546486 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataattttttcttttaaattgtacccttcaatt 34546413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43971502 - 43971575
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  |||||||||||||||| ||||||||||    
T  43971502 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtgcccttcaatt 43971575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32228166 - 32228086
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||||||||||||||||  ||||| | |||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  32228166 ttgttttaaaatgaatgtcacttttggttttaaatgcaataataactttttcttttcagttgtacccttcaattaatacta 32228086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 22620489 - 22620386
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||| |||| |||||||||| || |||||||||||  ||||||||||||||||||||| ||||| ||||| |  | |||||||||||| |    
T  22620489 ttgtttcaaaatgagtgtcgctttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactcaggacactacttccaaagt 22620390  T
Q  101 atta 104  Q
    ||||    
T  22620389 atta 22620386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4133022 - 4133092
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttca 71  Q
    |||||| |||||||||||||||||| |||| || |||||||||||  ||||||||||||||||||||||||    
T  4133022 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgtacccttca 4133092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10195572 - 10195642
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttca 71  Q
    |||||||||||||||||| ||||| | |||||| ||||||||||| ||||| |||||||||||||||||||    
T  10195572 ttgttttaaaatgaatgttacttttaattttcaatgcaataataacattttattttcaattgtacccttca 10195642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4051859 - 4051778
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataa-tattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||||||||| || ||||||||||| | ||||||||||||||||||| | ||||| ||||||    
T  4051859 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttttcttttcaattgtaccttccaattaatacta 4051778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6220559 - 6220486
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||||||||||||||| ||||| || |||||||||||  |||||||||||| |||||| |||||||    
T  6220559 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaactgtacctttcaatt 6220486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 7028967 - 7028862
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||| ||||| ||| || ||||||||| |  |||||||||||| |||||||||||||| |||||| | | ||||||| |||| |    
T  7028967 ttgtttcaaaatgaatgtcattttcactttccaatgcaataatgactttttcttttcaaatgtacccttcaattaatactatatacactactttcaaagt 7028868  T
Q  101 attatt 106  Q
    ||||||    
T  7028867 attatt 7028862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13561992 - 13562065
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| ||||| |||||||||||||||||  | |||||||||||  |||||||||||||||||||||||||||    
T  13561992 ttgtttcaaaataaatgtcactttcagtttctaatgcaataataactttttcttttcaattgtacccttcaatt 13562065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29396835 - 29396762
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| |||||||||||||||||| |||| || |||||||||||  |||||||||||||| ||||||||||||    
T  29396835 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattatacccttcaatt 29396762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36177974 - 36178047
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| |||||||||||||||||| |||| || |||||||||||  |||| ||||||||||||||||||||||    
T  36177974 ttgtttcaaaatgaatgtcactttccgtttccaatgcaataataacttttttttttcaattgtacccttcaatt 36178047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 7644649 - 7644717
Alignment:
Q  6 ttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||||||||||||| |||| |  ||||||||  |||||||||||||||||||||||||||    
T  7644649 ttaaaatgaatgtcactttcagtattcaatataataataactttttcttttcaattgtacccttcaatt 7644717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 30855105 - 30855221
Alignment:
Q  3 gttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaata 101  Q
    |||| ||||||||||||||| ||||||| || |||||||||||| ||||||||||||||||||| || |||| ||||||    | ||||||||||||| |    
T  30855105 gtttcaaaatgaatgtcactctcagtttccaatgcaataataat-ttttcttttcaattgtaccatttaattaatactatgttacactacttccaaaaca 30855203  T
Q  102 ttattattttttctttaatg 121  Q
    ||||  ||||||||||||||    
T  30855204 ttat--ttttttctttaatg 30855221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17695980 - 17695877
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||| ||||||||||||||| || ||  |||||||  ||||||||||||||||||||| ||||| |||||   || |||||||||||| |    
T  17695980 ttgtttcaaaatgagtgtcactttcagtttccaatgtgataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagt 17695881  T
Q  101 atta 104  Q
    ||||    
T  17695880 atta 17695877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 42004892 - 42004962
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||||||| ||| | ||| || |||||||||||| |||| ||||||||||||||||||||||    
T  42004892 ttttaaaatgaatgtcatttttaatttccaatgcaataataattttttattttcaattgtacccttcaatt 42004962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25383639 - 25383574
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacc 66  Q
    |||||||||||||||||| | ||||||||| || |||||||||||  |||||||||||||||||||    
T  25383639 ttgttttaaaatgaatgttattttcagtttccaatgcaataataactttttcttttcaattgtacc 25383574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33482384 - 33482311
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||||||||||||||| | |||||| || ||||||| | |||||||||||| ||||| ||||||||    
T  33482384 ttgttttaaaatgaatgtcacttttatttttcaatgtaataatatttttttcttttcaactgtactcttcaatt 33482311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4288866 - 4288786
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||| |||||| ||||||  | |||||||||||| ||||||||||||||| ||| ||||||| ||||||    
T  4288866 ttgtttcaaaatgaatatcacttacagtttctaatgcaataataattttttcttttcaattgcaccattcaattaatacta 4288786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28072565 - 28072671
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataa---tattttcttttcaattgtacccttcaattgatactaaacaaactacttccaa 97  Q
    ||||||||||||||||||||||||||||||||| | |||||||||   | |||| |||||||| ||| ||| ||||| |||||   || |||||||||||    
T  28072565 ttgttttaaaatgaatgtcactttcagttttcaatacaataataactttttttttttttcaatcgtatcctccaattaatactcttcacactacttccaa 28072664  T
Q  98 aatatta 104  Q
    | |||||    
T  28072665 agtatta 28072671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 9391706 - 9391651
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgt 63  Q
    ||||||||||||| |||||||||| | |||||||||||| ||||||||||||||||    
T  9391706 aaaatgaatgtcattttcagtttttaatgcaataataattttttcttttcaattgt 9391651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 11188640 - 11188545
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    |||||||||||||||||||||||||| ||||| |||||  | || |||||||||||| | ||||||| || ||| | | |||||||||||| ||||    
T  11188640 aaaatgaatgtcactttcagttttcaatgcaacaataacttatttttttcaattgtatcattcaattaatcctatatacactacttccaaagtatt 11188545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16792481 - 16792544
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgta 64  Q
    |||||| ||||||||||||||||| ||||| || |||||||||||  |||||||||||||||||    
T  16792481 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattgta 16792544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17703017 - 17703080
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgta 64  Q
    |||||||||||||||||||||||||| |||||| |||||||||||  |||||||| | ||||||    
T  17703017 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctttccgattgta 17703080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 35799201 - 35799303
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||| ||||||||||||||||| || |||||||||||  |||| |||||||||||||||| ||||| ||| ||  || ||||||| |||| |    
T  35799201 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataa-ctttttttttcaattgtaccctccaattaatattatgcacactactttcaaagt 35799299  T
Q  101 atta 104  Q
    ||||    
T  35799300 atta 35799303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12394076 - 12394003
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| ||||||||||| |||||||||||  | |||||||||||  |||| |||| |||||||||||||||||    
T  12394076 ttgtttcaaaatgaatgttactttcagtttctaatgcaataataactttttatttttaattgtacccttcaatt 12394003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 196
Target Start/End: Original strand, 19164362 - 19164544
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattatta 107  Q
    |||||||||| || ||||| |||| | |||||||||||  ||||||||| ||||||| ||||||||| ||| || | | ||||||| |||   | |||||    
T  19164362 aaaatgaatggcaatttcaatttttaatgcaataataactttttctttttaattgtatccttcaattaatattatatacactactttcaa---agtatta 19164458  T
Q  108 ttttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    ||||||||||||||         || ||||||||||   |||| |||||| ||||  || |||||||||||||||||||  ||||||||    
T  19164459 ttttttctttaatgaataacaaaccaatagttgatt---ataatttggtaaaataacatatctctttcttttaattaataaatttctta 19164544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 7874795 - 7874720
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    ||||||||| |||||||||||  |||| || |||||||||||  ||||||||||||| ||||||||||||| |||||    
T  7874795 ttttaaaattaatgtcactttt-gtttccaatgcaataataactttttcttttcaatcgtacccttcaattaatact 7874720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 15083295 - 15083227
Alignment:
Q  13 gaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| | ||||||||| || ||||||||||| ||||| ||||||||||||| |||||||| ||||||    
T  15083295 gaatgttattttcagtttccaatgcaataataacattttattttcaattgtactcttcaattaatacta 15083227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 14285943 - 14286014
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatac 79  Q
    ||||||||||||| ||||||||| || | |||||||||  |||| |||||||||||||||| ||||| ||||    
T  14285943 aaaatgaatgtcattttcagtttccaatacaataataacttttttttttcaattgtaccctccaattaatac 14286014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 1423206 - 1423307
Alignment:
Q  18 tcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaatattattattttttctt 116  Q
    |||||||||||||||| || ||||||||  | |||||||||||| |||||||||||| ||| ||    | |||||||||||||   ||||||||||||||    
T  1423206 tcactttcagttttcaatggaataataacttattcttttcaattatacccttcaattaatagtatgttacactacttccaaaa---tattattttttctt 1423302  T
Q  117 taatg 121  Q
    |||||    
T  1423303 taatg 1423307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7042341 - 7042239
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||| ||||| ||  || ||||||||| |  ||||||||| || |||||||||||||| |||||| | | ||||||| |||| |    
T  7042341 ttgtttcaaaatgaatgtcattttcacttcccaatgcaataatgactttttctttttaaatgtacccttcaattaatactatatacactactttcaaagt 7042242  T
Q  101 att 103  Q
    |||    
T  7042241 att 7042239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 27986034 - 27986139
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataata--atattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaa 98  Q
    ||||||||||||||||||||||||||||||||| | |||||| |   | |||| |||||||| ||| ||| ||||| |||||   || ||||||||||||    
T  27986034 ttgttttaaaatgaatgtcactttcagttttcaatacaataaaactttttttttttttcaatcgtatcctccaattaatactcttcacactacttccaaa 27986133  T
Q  99 atatta 104  Q
     |||||    
T  27986134 gtatta 27986139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 777768 - 777878
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataa--tattttcttttcaattgtacccttcaattgatac---taaacaaactacttcc 95  Q
    |||||||||||||||||||| ||||| |||  | |||||||||||  | |||||| ||||| |||||||||||||  ||||   || | | |||||||||    
T  777768 ttgttttaaaatgaatgtcattttcaatttctaatgcaataataaccttttttctgttcaaatgtacccttcaatcaatactattatatacactacttcc 777867  T
Q  96 aaaatattatt 106  Q
    |||||||||||    
T  777868 aaaatattatt 777878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14833890 - 14833837
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttctt 54  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||  |||||||    
T  14833890 ttgttttaaaatgaatgtcactttcaattttcaatgcaacaataactttttctt 14833837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35046516 - 35046589
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||| |||||||||||||||| ||| || |||||||||||  |||  |||| |||| ||||||||||||    
T  35046516 ttgttttaagatgaatgtcactttcaatttccaatgcaataataacttttaatttttaattatacccttcaatt 35046589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 45423618 - 45423719
Alignment:
Q  3 gttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatat 102  Q
    |||||||||||| ||| | ||||||||| || |||||||||||  |||||||||||| | | ||||  |||| ||||||  || |||||||||||| |||    
T  45423618 gttttaaaatgattgttattttcagtttccaatgcaataataactttttcttttcaaatattccctcgaattaatactatgcacactacttccaaagtat 45423717  T
Q  103 ta 104  Q
    ||    
T  45423718 ta 45423719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 34035899 - 34035865
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgca 38  Q
    |||||||||||||||||||||||||||||| ||||    
T  34035899 ttttaaaatgaatgtcactttcagttttcaatgca 34035865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9366274 - 9366229
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataat 46  Q
    |||||||||||| ||||||||||| |||||||| || |||||||||    
T  9366274 ttgttttaaaataaatgtcactttaagttttcaatgaaataataat 9366229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 43481026 - 43480907
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagt-tttcattgca-ataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaa 98  Q
    |||||| ||||||| ||||| ||||||| ||||| |||| |||||||  |||||||||||||| |||| || |||| |||||  | | || ||||||||     
T  43481026 ttgtttcaaaatgactgtcattttcagtgtttcaatgcatataataactttttcttttcaattataccttttaattaatactttatacacaacttccaa- 43480928  T
Q  99 atattattattttttctttaatg 121  Q
      | |||||||||||||||||||    
T  43480927 --agtattattttttctttaatg 43480907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 2e-26; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3152958 - 3152878
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  3152958 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatacta 3152878  T

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Target: chr3; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 39356883 - 39356963
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  39356883 ttgttttaaaataaatgtcactttcagttttcaatgcaataataacattttcttttcaattgtacctttcaattaatacta 39356963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 50038323 - 50038244
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||| ||||| |||||    
T  50038323 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatact 50038244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 36844894 - 36844702
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||  |||||||||||||||||||| |||||||||||| ||||||||||||||||| | ||||||| ||| || | | |||||||||||       
T  36844894 ttgtttcaaaaccaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtatcattcaattaatattatatacactacttccaa--- 36844798  T
Q  101 attattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    | |||||| ||||||||||||          | ||||||||||  ||||| |||||| |||| ||| ||||||||| |||||||||| ||||||||    
T  36844797 agtattatgttttctttaatgaaaaactaatcaatagttgattaggataatttggtaaaataatatctctctttctgttaattaatgcatttctta 36844702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 30315307 - 30315500
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| |||||||||||||||||| |||| || ||||| |||||  ||||||||| |||| |||||||||||| |||||| | | ||||||| ||||      
T  30315307 ttgtttcaaaatgaatgtcactttccgtttccaatgcaagaataactttttcttttgaattatacccttcaattaatactatatacactactttcaaa-- 30315404  T
Q  101 attattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    | |||||||||||||||||||         || ||||||||||  ||||| |||||| ||||  || ||||||||| |||||||||| ||||||||    
T  30315405 agtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacatctctctttctcttaattaatgcatttctta 30315500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 45213874 - 45213794
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||||||||||||||||||||||  | |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  45213874 ttgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttcttttcaattgtacccttcaattaatacta 45213794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 30431125 - 30431224
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaatattatt 106  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||| ||| || |  | |||||||||||| |||||||    
T  30431125 aaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtaaccttcaattaatattatattacactacttccaaagtattatt 30431224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31583586 - 31583483
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||| | ||||| |||||   || |||||||||||| |    
T  31583586 ttgttttaaaattaatgtcactttcagtttccagtgcaataataatcttttcttttcaattgtaccttccaattaatactctgcacactacttccaaagt 31583487  T
Q  101 atta 104  Q
    ||||    
T  31583486 atta 31583483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 48903284 - 48903476
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||| ||||||||| || |||||||||||  ||||||||||||||||||||| ||||| |||||| | | |||| || |   ||    
T  48903284 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactatatacactaatttc---at 48903380  T
Q  101 attattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    | ||||||||||||||||||           | |||||||||| | |||| ||| || |||| ||| |||||||||||||||||||| ||||||||    
T  48903381 agtattattttttctttaattaaaaacaaagcaatagttgattaaaataatttgataaaataatatatctctttcttttaattaatgcatttctta 48903476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 47137961 - 47138081
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||  |||| |||||||||||||||||||| | ||||||    | | |||||||||||    
T  47137961 ttgttttaaaatgaatgtcatttttagttttcaatgcaataataactttttattttcaattgtacccttcaaataatactatgttacagtacttccaaaa 47138060  T
Q  100 tattattattttttctttaatg 121  Q
    ||||||| ||||||||||||||    
T  47138061 tattatt-ttttttctttaatg 47138081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11019978 - 11019898
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||| ||||||||||||| ||||| ||||||| ||||||    
T  11019978 ttgttttaaaattaatgtcactttcatttttcaatgcaataataattttttcttttcaatcgtacctttcaattaatacta 11019898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 30934958 - 30934856
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||||||||||||||||   ||||||| || |||||||||||| |||||||||||||||||||| |||||| |||||| | | |||||||| ||| |    
T  30934958 ttgttttaaaatgaatgtca---tcagtttccaatgcaataataattttttcttttcaattgtacccctcaattaatactatatacactacttctaaagt 30934862  T
Q  101 attatt 106  Q
    ||||||    
T  30934861 attatt 30934856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 42571681 - 42571578
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| |||||||||||||||| |||||| || |||||||||||  ||||||||||||||||||||| ||||| |||||   || |||||||||||| |    
T  42571681 ttgtttcaaaatgaatgtcacttgcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagt 42571582  T
Q  101 atta 104  Q
    ||||    
T  42571581 atta 42571578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 51398008 - 51398126
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||| ||||| ||||||||||| |||||||| || ||||||||  ||||||||||||||||||||||||||| ||||||    | |||||||||||||    
T  51398008 ttgtttcaaaataaatgtcacttttagttttcaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaa 51398107  T
Q  100 tattattattttttctttaatg 121  Q
       |||||||||||||||||||    
T  51398108 ---tattattttttctttaatg 51398126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4392194 - 4392292
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaa 99  Q
    |||||| ||||||||||||| ||||||||| || |  ||||||||  ||||||||||||||||||||||||||| |||||| | | |||||||||||||    
T  4392194 ttgtttcaaaatgaatgtcagtttcagtttccaatttaataataactttttcttttcaattgtacccttcaattaatactatatatactacttccaaaa 4392292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 9189584 - 9189482
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    |||||||||||||||||||||||||||||| || ||||||||  |||||||||||| | || | ||||||| |||||| | | | |||||||||||||||    
T  9189584 ttttaaaatgaatgtcactttcagttttcaatgaaataataactttttcttttcaaatatatcattcaattaatactatatacattacttccaaaatatt 9189485  T
Q  104 att 106  Q
    |||    
T  9189484 att 9189482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 11393543 - 11393621
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatac 79  Q
    |||||||||||||||||||| ||||| ||| || |||||||||||  ||||||||||||||||||||||||||| ||||    
T  11393543 ttgttttaaaatgaatgtcattttcaatttccaatgcaataataactttttcttttcaattgtacccttcaattaatac 11393621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 22857088 - 22857204
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||||||||||||||||  |||||| || ||||||||  ||||||||||||||||||  ||||||| ||| || | | |||||||| |||||    
T  22857088 ttgttttaaaatgaatgtcactttcgattttcaatgtaataataactttttcttttcaattgtactgttcaattaatattatatacactacttctaaaat 22857187  T
Q  101 attattattttttctttaat 120  Q
    |||   ||||||||||||||    
T  22857188 att---attttttctttaat 22857204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 38140949 - 38141065
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaata 101  Q
    ||||| ||||||||||||||||||||||| || |||||||||||  |||| ||||  ||||| |||||||||| |||||| | | |||||||||||||      
T  38140949 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttttttttcattgtgcccttcaattaatactatatacactacttccaaaa-- 38141046  T
Q  102 ttattattttttctttaatg 121  Q
     ||| |||||||||||||||    
T  38141047 -tataattttttctttaatg 38141065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 41850388 - 41850461
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||||||| |||||| ||||| || |||||||||||  |||||||||||||||||||||||||||    
T  41850388 ttgttttaaaatgaatgacacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaatt 41850461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 48901718 - 48901834
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||| ||||||||| || |||||||||||  ||||||||||||||||||||| ||||| |||||| | | |||| || |   ||    
T  48901718 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactatatacactaatttc---at 48901814  T
Q  101 attattattttttctttaat 120  Q
    | ||||||||||||||||||    
T  48901815 agtattattttttctttaat 48901834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30426476 - 30426396
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||| ||||||||| || |||||||||||  ||||||||| ||||||||||||||||| ||||||    
T  30426476 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctttttaattgtacccttcaattaatacta 30426396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 36460805 - 36460877
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||| ||||||||| |||||||||||||||| |||||||||||  ||||||||||||||| |||||||||||    
T  36460805 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgcacccttcaatt 36460877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 38016373 - 38016452
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||| ||||||||| ||||||    
T  38016373 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgta-ccttcaattaatacta 38016452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 47895496 - 47895416
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||||| ||| || |||||||||||  |||||||||||||| |||||||||||| ||||||    
T  47895496 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattatacccttcaattaatacta 47895416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 50088468 - 50088388
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||||||| |||||||| ||||| || ||||||| |||  ||||||||||||||||||||||||||| ||||||    
T  50088468 ttgttttaaaatgaacgtcacttttagtttccaatgcaatagtaactttttcttttcaattgtacccttcaattaatacta 50088388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 53200832 - 53200768
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtac 65  Q
    |||||||||||||||||||||||| |||||||| |||||||||||  ||||||||||||||||||    
T  53200832 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataactttttcttttcaattgtac 53200768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4758989 - 4759068
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    |||||||||||| ||||||||||||| ||| || |||||||||||  ||||||||||||||||||| ||||||| |||||    
T  4758989 ttgttttaaaataaatgtcactttcactttccaatgcaataataactttttcttttcaattgtacctttcaattaatact 4759068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32492333 - 32492254
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    |||||| ||||||||||||||||||| |||||| |||||||||||  |||||||||||||| |||| ||||||| |||||    
T  32492333 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattataccattcaattaatact 32492254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 44676219 - 44676298
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    |||||| ||||||||||||||||||||||| || |||||| ||||  ||||||||||||||||||||| ||||| |||||    
T  44676219 ttgtttcaaaatgaatgtcactttcagtttccaatgcaatgataactttttcttttcaattgtaccctccaattaatact 44676298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 2458005 - 2458124
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||| ||||||||||||||||||||||| || | |||||||||  ||||||||| |||| |||||||||||| |||||| |  | ||||||||||||     
T  2458005 ttgtttcaaaatgaatgtcactttcagtttccaatacaataataactttttctttttaattatacccttcaattaatactatattacactacttccaaag 2458104  T
Q  100 tattattattttttctttaatg 121  Q
    |||| |  ||||||||||||||    
T  2458105 tattgt--ttttttctttaatg 2458124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 36729955 - 36729889
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||||||||| ||| || |||||||||||  |||||||||||||||||||||||||||    
T  36729955 aaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtacccttcaatt 36729889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33194183 - 33194110
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||||||||||||||||||||||||||| || |||||| ||||  |||| |||| |||||||||||||||||    
T  33194183 ttgttttaaaatgaatgtcactttcagtttccaatgcaatgataactttttatttttaattgtacccttcaatt 33194110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35557910 - 35557837
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||  || ||||||||||||| || |||||||||||| ||||||||||||||||||| |||||||    
T  35557910 ttgttttaaaatatatatcactttcagtttccaatgcaataataattttttcttttcaattgtacctttcaatt 35557837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 50646262 - 50646157
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||| ||||||||||||||||| || |||||||||||  ||||||||||||||||||| || |||| |||||| | | | |||||| ||| |    
T  50646262 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccatttaattaatactatatacattacttcaaaagt 50646163  T
Q  101 attatt 106  Q
    ||||||    
T  50646162 attatt 50646157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 19373584 - 19373701
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||| ||||||||||| |||||| || ||||||||  |||| |||||||||||||||||||||| |||  | | | |||||||||||       
T  19373584 ttgtttcaaaatgactgtcactttcaattttcaatgaaataataactttttattttcaattgtacccttcaattaatatcatatacactacttccaa--- 19373680  T
Q  101 attattattttttctttaatg 121  Q
    | | |||||||||||||||||    
T  19373681 agttttattttttctttaatg 19373701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 40487833 - 40487931
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattatt 106  Q
    |||||||||||||||||   ||| || |||||||||||  ||||||||||||||||||| ||||||| |||||| | | |||||||| ||| |||||||    
T  40487833 aaaatgaatgtcacttttgatttccaatgcaataataactttttcttttcaattgtacctttcaattaatactatatacactacttctaaagtattatt 40487931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 42071983 - 42072175
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    ||||||||||||| |||||| ||| ||||| || |||||||||||  |||||||||||| |||||||||||||| ||| || | | | |||||| ||       
T  42071983 ttgttttaaaatggatgtcatttttagtttccaatgcaataataactttttcttttcaactgtacccttcaattaatattatatacattacttctaa--- 42072079  T
Q  101 attattattttttctttaatgnnnnnnnnnccgatagttgattcagataacttggtagaatattatttctctttcttttaattaatgtatttctta 196  Q
    | |||||| ||||||||||||          | ||||||||||  ||||| || ||| ||||  || ||||||||||||||||||| |||||||||    
T  42072080 agtattatgttttctttaatggaaaacaaatcaatagttgattatgataatttagtaaaataacatatctctttcttttaattaatatatttctta 42072175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 50346624 - 50346740
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||| | ||||||| ||| |||||||| ||||||||||  |||||||||||||||||||||||||||  ||| |||| | | ||||||||| |     
T  50346624 ttgtttcaaactaaatgtcattttgagttttcaatgcaataatac-attttcttttcaattgtacccttcaatcaataataaatacattacttccaaca- 50346721  T
Q  101 attattattttttctttaatg 121  Q
      |||||||||||||||||||    
T  50346722 --tattattttttctttaatg 50346740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 47823603 - 47823482
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||||||||| ||||||| ||| |||||| | |||||||||||| ||||||||| |||||||  |||||||| |||||| | | |||| || |||| |    
T  47823603 ttgttttaaaataaatgtcatttttagtttttaatgcaataataattttttctttttaattgtattcttcaattaatactatatacactattttcaaatt 47823504  T
Q  101 attatta-ttttttctttaatg 121  Q
      ||||| ||||||||||||||    
T  47823503 tgtattacttttttctttaatg 47823482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31853714 - 31853634
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||| ||||||||||| ||||| || | |||||||||| |||||||||  |||||||||||||||| ||||||    
T  31853714 ttgtttcaaaataaatgtcacttttagtttccagtacaataataattttttcttttttattgtacccttcaattaatacta 31853634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 19115385 - 19115487
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||||||||| ||||| || |||||||||||  |||||||||||||| || ||| ||||| |||||   || |||||||||||| |    
T  19115385 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattata-cctccaattaatactctgcacactacttccaaagt 19115483  T
Q  101 atta 104  Q
    ||||    
T  19115484 atta 19115487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 33024449 - 33024379
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||||| ||||||||||| || |||||||||||  || |||||||||||| ||| |||||||    
T  33024449 ttttaaaatgaatgttactttcagtttccaatgcaataataactttatcttttcaattgcaccattcaatt 33024379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41287651 - 41287575
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataata---ttttcttttcaattgtacccttcaatt 74  Q
    |||||| |||||||||||||||||| |||| || ||||||| |||||   |||||||||||||| ||||||||||||    
T  41287651 ttgtttcaaaatgaatgtcactttcggtttccagtgcaatactaataactttttcttttcaattatacccttcaatt 41287575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 38363785 - 38363869
Alignment:
Q  3 gttttaaaatgaatgtcactttcagttttcattgcaataataa------tattttcttttcaattgtacccttcaattgatacta 81  Q
    |||| ||||||||||||||||||||||| || |||||||||||      | |||| |||||||||||||||||||||| ||||||    
T  38363785 gtttcaaaatgaatgtcactttcagtttacaatgcaataataacctttttttttttttttcaattgtacccttcaattaatacta 38363869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 7231047 - 7230968
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||| ||||||||||||||||| ||||   | |||||||||||  ||||||||||||||||| | ||||||| ||||||    
T  7231047 tgtttcaaaatgaatgtcacttttagttacgaatgcaataataactttttcttttcaattgtatcattcaattaatacta 7230968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 27067640 - 27067686
Alignment:
Q  35 tgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  27067640 tgcaataataactttttcttttcaattgtacccttcaattaatacta 27067686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 8817139 - 8817202
Alignment:
Q  2 tgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacc 66  Q
    ||||||||||||||||| | |||||||| ||| |||||||||||| |||||  ||||||||||||    
T  8817139 tgttttaaaatgaatgttattttcagttatcaatgcaataataattttttc-cttcaattgtacc 8817202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 23525468 - 23525388
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||| ||||| |||||   ||| || |||||||||||  |||||||||||| | |||||||||||| ||||||    
T  23525468 ttgttttaaaataaatgttacttttgatttccaatgcaataataagtttttcttttcaactatacccttcaattaatacta 23525388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 42886749 - 42886850
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| ||||||||||| ||||| | ||| || |||||||||||  |||||||||||||  |||||| ||||| ||| ||  || |||||||||||| |    
T  42886749 ttgtttcaaaatgaatgttactttaaatttccaatgcaataataactttttcttttcaat--taccctccaattaatattatgcacactacttccaaagt 42886846  T
Q  101 atta 104  Q
    ||||    
T  42886847 atta 42886850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26121859 - 26121792
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtaccct 68  Q
    |||||||||||| |||||||||  ||||||||| || || |||| ||||||  |||||||||||||||    
T  26121859 ttgttttaaaataaatgtcactgacagttttcaatgtaaaaatattattttactttcaattgtaccct 26121792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 52654310 - 52654360
Alignment:
Q  9 aaatgaatgtcactttcagttttcattgcaataataatattttcttttcaa 59  Q
    |||| |||||||||||||||||||| | |||||||||  ||||||||||||    
T  52654310 aaataaatgtcactttcagttttcaatacaataataactttttcttttcaa 52654360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 54403413 - 54403343
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||||||| ||| |||||  | ||||||  ||| |||||||||||| ||||||||| |||||    
T  54403413 ttttaaaatgaatgtcatttttagtttcaaatgcaatgttaacattttcttttcatttgtaccctccaatt 54403343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 51058304 - 51058267
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgca 38  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  51058304 ttgttttaaaatgaatgtcactttaagttttcaatgca 51058267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 196
Target Start/End: Original strand, 4392643 - 4392671
Alignment:
Q  168 tctctttcttttaattaatgtatttctta 196  Q
    |||||||||||||||||||||||||||||    
T  4392643 tctctttcttttaattaatgtatttctta 4392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 24357506 - 24357466
Alignment:
Q  41 aataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||| ||| |||||||||||||||||||||| ||||||    
T  24357506 aataataatttattttcaattgtacccttcaattaatacta 24357466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 3965 - 3862
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaat 100  Q
    |||||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||| ||||| |||||   || |||||||||||| |    
T  3965 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatactctgcacactacttccaaagt 3866  T
Q  101 atta 104  Q
    ||||    
T  3865 atta 3862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 665 - 589
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatact 80  Q
    ||||||||||||||||||||||||||| || |||||||||||| |||||||| |||||||||||||||||| |||||    
T  665 ttttaaaatgaatgtcactttcagtttccaatgcaataataattttttctttacaattgtacccttcaattaatact 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9796 - 9716
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||||||||||||||||| ||||||||| || |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  9796 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatacta 9716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 10110 - 10004
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatatttt-cttttcaattgtacccttcaattgatactaaacaaactacttccaaaa 99  Q
    |||||||||||||||||||||||||| |||||| | | |||||||| |||| |||||||||||||||||||||||  ||||| | | | |||||| ||||    
T  10110 ttgttttaaaatgaatgtcactttcaattttcaatactataataatttttttcttttcaattgtacccttcaattagtactatatacaatacttcaaaaa 10011  T
Q  100 tattatt 106  Q
    |||||||    
T  10010 tattatt 10004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 24895 - 24815
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    |||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||||||| ||||||    
T  24895 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatacta 24815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 21233 - 21156
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||| |||||||||||||||  | |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  21233 ttttaaaatgactgtcactttcagtttcaaatgcaataataattttttcttttcaattgtacccttcaattaatacta 21156  T

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Target: scaffold0502 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 723 - 621
Alignment:
Q  4 ttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatatt 103  Q
    |||||||||||||||||||| || ||| || |||||||||||  ||||||||| ||||||||||||||||| ||| || | | |||||||||||| ||||    
T  723 ttttaaaatgaatgtcacttacaatttccaatgcaataataactttttctttttaattgtacccttcaattaatattatatacactacttccaaagtatt 624  T
Q  104 att 106  Q
    |||    
T  623 att 621  T

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Target: scaffold0300 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 4570 - 4667
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatattat 105  Q
    ||||||||||||||||| | |||| | |||||||||||| ||||||||||||||||||| ||||||  ||| || | | |||||||||||||||||||    
T  4570 aaaatgaatgtcacttttaatttttaatgcaataataattttttcttttcaattgtacctttcaatcaatattatatacactacttccaaaatattat 4667  T

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Target: scaffold0294 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 3652 - 3579
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta 81  Q
    ||||||||||||||||||||||| || | |||||||||  ||||||||||||||||||||||||||| ||||||    
T  3652 aaaatgaatgtcactttcagtttccaatacaataataactttttcttttcaattgtacccttcaattaatacta 3579  T

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Target: scaffold0026 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 4141 - 4241
Alignment:
Q  4 ttttaaaatgaatgtcacttt-cagttttcattgcaataataatattttcttttcaattgtacccttcaattgatactaaacaaactacttccaaaatat 102  Q
    ||||||||||||||||| ||| || |||||| |||||||||||| ||||||||||||||||||||||||||| ||| || | | |||||||| ||| |||    
T  4141 ttttaaaatgaatgtcatttttcaattttcaatgcaataataattttttcttttcaattgtacccttcaattaatattatatacactacttctaaagtat 4240  T
Q  103 t 103  Q
    |    
T  4241 t 4241  T

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Target: scaffold0182 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 18402 - 18336
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    ||||||||||||| ||||||||| || |||||||||||  |||||||||||||||||||||||||||    
T  18402 aaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtacccttcaatt 18336  T

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Target: scaffold0078 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 1568 - 1449
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 99  Q
    |||||| |||||||||||||||||||||||  | |||||| ||||  |||||||||||||||||||||||| || ||| ||    | |||||||||||||    
T  1568 ttgtttcaaaatgaatgtcactttcagtttctaatgcaatgataactttttcttttcaattgtacccttcatttaatattatgttacactacttccaaaa 1469  T
Q  100 tattattattttttctttaatg 121  Q
    ||||||  ||||||||||||||    
T  1468 tattat--ttttttctttaatg 1449  T

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Target: scaffold0983 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 841 - 768
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| | ||||||||||||||||||||| || || ||||||||| |||||||||||||||||||||| ||||    
T  841 ttgtttcacaatgaatgtcactttcagtttccactggaataataattttttcttttcaattgtaccctttaatt 768  T

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Target: scaffold0048 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 62631 - 62704
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| ||||||||||||||||||||||| |  || ||||||||  ||||||||| |||||||||||||||||    
T  62631 ttgtttcaaaatgaatgtcactttcagtttcctatgtaataataactttttctttttaattgtacccttcaatt 62704  T

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Target: scaffold0136 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 9470 - 9516
Alignment:
Q  28 ttttcattgcaataataatattttcttttcaattgtacccttcaatt 74  Q
    |||||| |||||||||||| |||||||||||||||||||||| ||||    
T  9470 ttttcaatgcaataataattttttcttttcaattgtaccctttaatt 9516  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 75454 - 75410
Alignment:
Q  1 ttgttttaaaatgaatgtcactttcagttttcattgcaataataa 45  Q
    |||||| |||||||||||||| |||||||||||  ||||||||||    
T  75454 ttgtttcaaaatgaatgtcacattcagttttcaaagcaataataa 75410  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 153318 - 153382
Alignment:
Q  8 aaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaa 72  Q
    ||||||||||||| ||||| |||||| |||||| ||||   |||| || ||||||||||||||||    
T  153318 aaaatgaatgtcattttcaattttcaatgcaatgataactatttcattccaattgtacccttcaa 153382  T

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