View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13763_high_195 (Length: 207)
Name: NF13763_high_195
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13763_high_195 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 144; Significance: 6e-76; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 6842487 - 6842312
Alignment:
| Q |
13 |
tcatcaactttgcactatatttctccatggatcaatttgatggaaatcattatgatgaaagctccatcaataaaggaaatcatcatgaatattccttata |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
6842487 |
tcatcaactttgcactatatttctccatggatcaatttgatggaaatcgttatgatgaaagctccatcaataaaggatatcatcatgaatattccttata |
6842388 |
T |
|
| Q |
113 |
aattgtggttgagttatatattaactttgagggacctcgtccacaccttaaacctagtagaaattgttccctcatcatt |
191 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
6842387 |
aattgtgg-tgagt--tatattaactttgagggacctcgtccacaccttccacctagtagaaattgttccctcatcatt |
6842312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University