View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13763_high_21 (Length: 613)

Name: NF13763_high_21
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13763_high_21
NF13763_high_21
[»] scaffold0202 (1 HSPs)
scaffold0202 (5-271)||(4910-5171)
[»] chr8 (30 HSPs)
chr8 (363-613)||(27927876-27928140)
chr8 (363-613)||(8885388-8885652)
chr8 (363-613)||(44106183-44106447)
chr8 (363-613)||(42280826-42281093)
chr8 (363-613)||(34853290-34853552)
chr8 (366-613)||(3094644-3094909)
chr8 (366-584)||(37248521-37248753)
chr8 (367-584)||(16310563-16310794)
chr8 (363-613)||(28916743-28916999)
chr8 (366-613)||(31519827-31520088)
chr8 (366-613)||(21004353-21004608)
chr8 (363-613)||(9073464-9073728)
chr8 (416-580)||(40994805-40994983)
chr8 (389-613)||(17119814-17120053)
chr8 (363-486)||(36404232-36404353)
chr8 (473-613)||(14163992-14164146)
chr8 (395-613)||(40392526-40392760)
chr8 (363-486)||(41530629-41530753)
chr8 (389-475)||(35676625-35676711)
chr8 (397-466)||(11698382-11698451)
chr8 (517-613)||(36165773-36165877)
chr8 (395-613)||(1076544-1076779)
chr8 (366-486)||(7971073-7971193)
chr8 (517-613)||(40328017-40328121)
chr8 (411-548)||(4259643-4259788)
chr8 (395-479)||(33472059-33472143)
chr8 (395-437)||(10840881-10840923)
chr8 (549-607)||(11698257-11698315)
chr8 (395-515)||(6395075-6395196)
chr8 (557-613)||(1374108-1374164)
[»] chr4 (42 HSPs)
chr4 (363-613)||(19835488-19835752)
chr4 (363-613)||(17933072-17933336)
chr4 (363-613)||(25491330-25491594)
chr4 (363-607)||(40703631-40703890)
chr4 (363-607)||(48319005-48319263)
chr4 (363-613)||(7931626-7931888)
chr4 (366-548)||(55052627-55052815)
chr4 (372-608)||(46440214-46440464)
chr4 (363-613)||(2505966-2506232)
chr4 (366-613)||(38536141-38536403)
chr4 (363-515)||(54631509-54631662)
chr4 (372-613)||(25752378-25752634)
chr4 (366-543)||(29822590-29822773)
chr4 (412-613)||(41413033-41413249)
chr4 (366-608)||(3703189-3703446)
chr4 (390-613)||(8106387-8106626)
chr4 (424-613)||(31582357-31582560)
chr4 (366-548)||(23523877-23524066)
chr4 (368-493)||(25539017-25539142)
chr4 (366-613)||(32441782-32442042)
chr4 (395-607)||(34972864-34973090)
chr4 (366-613)||(6228748-6229007)
chr4 (366-613)||(6003608-6003869)
chr4 (363-445)||(53894108-53894190)
chr4 (366-613)||(49396979-49397244)
chr4 (517-613)||(53893960-53894064)
chr4 (366-480)||(38416536-38416650)
chr4 (372-442)||(50392529-50392599)
chr4 (517-613)||(41323027-41323131)
chr4 (517-608)||(25538918-25539018)
chr4 (554-613)||(54631427-54631486)
chr4 (444-514)||(52077012-52077082)
chr4 (517-604)||(27742057-27742153)
chr4 (549-608)||(47873978-47874037)
chr4 (562-613)||(1788175-1788226)
chr4 (562-613)||(42497811-42497862)
chr4 (549-595)||(25140459-25140505)
chr4 (552-613)||(14474147-14474208)
chr4 (562-607)||(47456781-47456826)
chr4 (395-435)||(5865208-5865248)
chr4 (75-135)||(55781542-55781602)
chr4 (75-135)||(55845722-55845782)
[»] chr7 (37 HSPs)
chr7 (363-606)||(28230410-28230666)
chr7 (363-608)||(3936068-3936327)
chr7 (368-613)||(36468472-36468730)
chr7 (363-610)||(37518233-37518494)
chr7 (366-585)||(24042151-24042384)
chr7 (366-613)||(42925575-42925837)
chr7 (366-608)||(36629168-36629422)
chr7 (358-613)||(36408325-36408595)
chr7 (366-602)||(47202457-47202707)
chr7 (363-608)||(19225538-19225798)
chr7 (363-514)||(43737084-43737234)
chr7 (384-613)||(8154880-8155123)
chr7 (362-613)||(9151773-9152020)
chr7 (366-613)||(3304693-3304955)
chr7 (366-613)||(31643004-31643265)
chr7 (363-607)||(33151167-33151421)
chr7 (456-605)||(42865045-42865208)
chr7 (363-454)||(42877153-42877244)
chr7 (397-607)||(31985458-31985685)
chr7 (396-471)||(33574125-33574200)
chr7 (389-479)||(7115354-7115444)
chr7 (373-542)||(6467665-6467843)
chr7 (516-613)||(19818499-19818604)
chr7 (549-613)||(43737242-43737306)
chr7 (395-478)||(37218189-37218272)
chr7 (517-607)||(1518827-1518925)
chr7 (396-613)||(36946227-36946458)
chr7 (549-608)||(24690274-24690333)
chr7 (562-613)||(37398826-37398877)
chr7 (389-442)||(26555161-26555214)
chr7 (363-419)||(28349227-28349283)
chr7 (395-455)||(48775574-48775634)
chr7 (550-613)||(33573978-33574041)
chr7 (561-607)||(5278436-5278482)
chr7 (389-423)||(28349192-28349226)
chr7 (372-429)||(28346116-28346173)
chr7 (559-595)||(8214243-8214279)
[»] chr2 (28 HSPs)
chr2 (363-608)||(44465662-44465922)
chr2 (363-613)||(39447122-39447386)
chr2 (363-613)||(45153721-45153985)
chr2 (364-613)||(41510359-41510622)
chr2 (363-613)||(32187799-32188064)
chr2 (363-607)||(33452379-33452637)
chr2 (363-613)||(15995043-15995308)
chr2 (363-613)||(17474729-17474993)
chr2 (395-607)||(41854840-41855061)
chr2 (363-514)||(25217834-25217984)
chr2 (395-613)||(42894369-42894601)
chr2 (395-608)||(36874977-36875204)
chr2 (366-613)||(36948875-36949136)
chr2 (379-498)||(4268297-4268416)
chr2 (368-613)||(34517066-34517325)
chr2 (368-613)||(5507381-5507643)
chr2 (389-613)||(41203116-41203354)
chr2 (363-461)||(9847521-9847619)
chr2 (395-479)||(33366920-33367003)
chr2 (449-606)||(8388696-8388868)
chr2 (397-461)||(38308890-38308954)
chr2 (549-607)||(16750365-16750422)
chr2 (396-513)||(38066717-38066834)
chr2 (396-607)||(19109951-19110176)
chr2 (549-607)||(30763809-30763867)
chr2 (363-461)||(25715323-25715423)
chr2 (562-607)||(42478916-42478961)
chr2 (404-456)||(34817092-34817144)
[»] chr6 (36 HSPs)
chr6 (366-613)||(17264373-17264634)
chr6 (363-613)||(14587495-14587759)
chr6 (363-613)||(3717217-3717482)
chr6 (366-613)||(4508237-4508498)
chr6 (366-613)||(23406759-23407021)
chr6 (370-548)||(32035080-32035259)
chr6 (364-613)||(1945465-1945727)
chr6 (363-498)||(7412788-7412922)
chr6 (366-608)||(5699521-5699785)
chr6 (372-613)||(24604296-24604552)
chr6 (448-608)||(2539496-2539670)
chr6 (366-613)||(2813159-2813422)
chr6 (366-502)||(33413407-33413542)
chr6 (420-613)||(5638879-5639086)
chr6 (87-230)||(31096251-31096398)
chr6 (389-608)||(9905104-9905334)
chr6 (68-206)||(31080594-31080735)
chr6 (521-613)||(13800962-13801062)
chr6 (37-190)||(31035435-31035593)
chr6 (363-501)||(21517542-21517670)
chr6 (34-210)||(31069919-31070097)
chr6 (67-152)||(31110481-31110566)
chr6 (517-613)||(29519399-29519503)
chr6 (9-68)||(31096398-31096457)
chr6 (60-153)||(31056712-31056806)
chr6 (549-613)||(21514966-21515030)
chr6 (549-613)||(32044542-32044606)
chr6 (121-211)||(31045951-31046044)
chr6 (524-607)||(7734267-7734358)
chr6 (562-607)||(16450387-16450432)
chr6 (107-212)||(31027096-31027204)
chr6 (517-613)||(236914-237018)
chr6 (224-271)||(31096172-31096219)
chr6 (389-479)||(29289710-29289799)
chr6 (224-269)||(31110875-31110920)
chr6 (559-607)||(6704067-6704115)
[»] chr1 (37 HSPs)
chr1 (363-602)||(32817557-32817810)
chr1 (363-613)||(15069776-15070041)
chr1 (363-607)||(42545928-42546185)
chr1 (363-613)||(44573032-44573295)
chr1 (371-613)||(45046785-45047041)
chr1 (398-613)||(49677478-49677707)
chr1 (366-613)||(33611345-33611606)
chr1 (368-613)||(23442703-23442962)
chr1 (389-613)||(34162656-34162894)
chr1 (372-613)||(40650610-40650865)
chr1 (366-613)||(41584600-41584866)
chr1 (366-613)||(17000342-17000603)
chr1 (363-613)||(40907869-40908133)
chr1 (363-605)||(7011169-7011426)
chr1 (366-613)||(18583479-18583740)
chr1 (366-613)||(49786232-49786492)
chr1 (363-613)||(45567825-45568076)
chr1 (363-613)||(38885199-38885437)
chr1 (390-613)||(34006246-34006485)
chr1 (363-486)||(43319272-43319395)
chr1 (389-613)||(28866565-28866803)
chr1 (395-548)||(32542388-32542544)
chr1 (366-548)||(6223754-6223934)
chr1 (395-486)||(30829542-30829632)
chr1 (363-442)||(52744937-52745016)
chr1 (517-613)||(52744778-52744882)
chr1 (395-486)||(24471390-24471481)
chr1 (396-607)||(26723429-26723649)
chr1 (395-479)||(800885-800969)
chr1 (366-452)||(27794818-27794903)
chr1 (420-486)||(38950286-38950352)
chr1 (448-613)||(3561270-3561451)
chr1 (549-613)||(27794991-27795054)
chr1 (395-461)||(890500-890566)
chr1 (395-433)||(9446183-9446221)
chr1 (397-548)||(24472835-24472995)
chr1 (549-613)||(25563349-25563413)
[»] chr5 (39 HSPs)
chr5 (363-613)||(39524698-39524962)
chr5 (363-608)||(38692723-38692982)
chr5 (368-613)||(6156658-6156917)
chr5 (372-613)||(38871602-38871857)
chr5 (366-613)||(15799150-15799411)
chr5 (372-608)||(20891544-20891794)
chr5 (363-613)||(28083313-28083577)
chr5 (363-584)||(38372231-38372466)
chr5 (365-613)||(40619924-40620187)
chr5 (366-613)||(4064654-4064916)
chr5 (397-613)||(31221274-31221504)
chr5 (366-613)||(33487535-33487797)
chr5 (369-548)||(25746954-25747138)
chr5 (363-613)||(15957672-15957935)
chr5 (363-613)||(24203619-24203879)
chr5 (411-613)||(29862582-29862799)
chr5 (367-548)||(26190306-26190493)
chr5 (367-613)||(37183716-37183977)
chr5 (366-613)||(12465054-12465302)
chr5 (366-613)||(27212633-27212890)
chr5 (389-613)||(32841905-32842145)
chr5 (363-613)||(31929060-31929304)
chr5 (366-486)||(26319043-26319162)
chr5 (395-490)||(14111851-14111946)
chr5 (366-454)||(37095023-37095110)
chr5 (395-486)||(34440688-34440778)
chr5 (363-479)||(36359669-36359784)
chr5 (389-496)||(8032219-8032326)
chr5 (478-613)||(7884230-7884379)
chr5 (397-606)||(26095047-26095271)
chr5 (439-607)||(13908545-13908728)
chr5 (389-442)||(34529976-34530029)
chr5 (517-613)||(14111949-14112051)
chr5 (368-410)||(28108308-28108350)
chr5 (397-456)||(11186282-11186341)
chr5 (561-607)||(26898744-26898790)
chr5 (395-433)||(28445540-28445578)
chr5 (372-442)||(43388189-43388259)
chr5 (549-585)||(8738948-8738984)
[»] chr3 (41 HSPs)
chr3 (366-613)||(50716215-50716477)
chr3 (366-613)||(50796370-50796632)
chr3 (366-613)||(3902741-3903002)
chr3 (363-608)||(38977688-38977947)
chr3 (363-597)||(47739883-47740131)
chr3 (372-608)||(51540554-51540804)
chr3 (370-613)||(46622730-46622977)
chr3 (363-608)||(3352006-3352266)
chr3 (363-607)||(35142037-35142292)
chr3 (363-613)||(39149770-39150033)
chr3 (367-599)||(33438486-33438731)
chr3 (388-613)||(501076-501315)
chr3 (391-613)||(34821278-34821514)
chr3 (366-606)||(2358564-2358819)
chr3 (366-613)||(47301982-47302242)
chr3 (395-613)||(52777223-52777455)
chr3 (363-613)||(51258363-51258628)
chr3 (366-613)||(28872966-28873230)
chr3 (397-604)||(30721754-30721974)
chr3 (413-607)||(43472910-43473118)
chr3 (363-468)||(34821490-34821595)
chr3 (363-613)||(49096161-49096425)
chr3 (363-432)||(47123066-47123135)
chr3 (363-432)||(47130432-47130501)
chr3 (370-548)||(3937355-3937530)
chr3 (363-479)||(48303951-48304067)
chr3 (370-469)||(45244356-45244455)
chr3 (517-613)||(47123146-47123250)
chr3 (517-613)||(47130512-47130616)
chr3 (389-439)||(42936686-42936736)
chr3 (467-548)||(27143424-27143511)
chr3 (517-607)||(29035919-29036017)
chr3 (550-607)||(51492960-51493017)
chr3 (405-479)||(32024985-32025059)
chr3 (444-613)||(5127834-5128017)
chr3 (448-607)||(29048387-29048560)
chr3 (561-613)||(46624892-46624944)
chr3 (562-613)||(26464999-26465050)
chr3 (389-424)||(33700775-33700810)
chr3 (564-613)||(3938357-3938406)
chr3 (444-489)||(47980080-47980125)
[»] scaffold0508 (1 HSPs)
scaffold0508 (363-613)||(3330-3596)
[»] scaffold0027 (1 HSPs)
scaffold0027 (363-606)||(141906-142161)
[»] scaffold0137 (1 HSPs)
scaffold0137 (366-613)||(9432-9693)
[»] scaffold0182 (2 HSPs)
scaffold0182 (373-501)||(23092-23220)
scaffold0182 (523-585)||(23228-23298)
[»] scaffold0010 (2 HSPs)
scaffold0010 (549-613)||(140645-140709)
scaffold0010 (363-407)||(140568-140612)
[»] scaffold0018 (1 HSPs)
scaffold0018 (121-211)||(170686-170779)


Alignment Details
Target: scaffold0202 (Bit Score: 168; Significance: 1e-89; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 5 - 271
Target Start/End: Complemental strand, 5171 - 4910
Alignment:
Q  5 aatgtgtgtgagacacttattttctttaaatattggagtttcttcttctactgtaaccttgtgcatgagtttagacttgtaactttggttttctcttaag 104  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5171 aatgtgtgtgagacacttattttctttaaatattcgagtttcttcttctactgtaaccttgtgcatgagtttagacttgtaactttggttttctcttaag 5072  T
Q  105 atatgtagt-ataccgcaacaagtcccacatcgagtatacgttaaaaca-gcactgaagtt--tttataaaataagagtgtgtatcacttagtaactcat 200  Q
     |||| ||| ||||| ||||||||||||||| ||||||||||||||||| ||||||| |||  | |||||||||||||||| ||||||||| ||||||||    
T  5071 gtatgcagtaataccacaacaagtcccacatagagtatacgttaaaacaggcactgaggtttatctataaaataagagtgtatatcacttattaactcat 4972  T
Q  201 agttggggaccaatctattacttttgttgtggttgttgctgggaattacaagcgattgcatttttaaataa 271  Q
    |||||||||||||||||||||||         |||||||||||||||| ||| ||||||||||||||||||    
T  4971 agttggggaccaatctattactt---------ttgttgctgggaattataagtgattgcatttttaaataa 4910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 157; Significance: 4e-83; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 27928140 - 27927876
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  27928140 taaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatca 27928041  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    |||||||||||||||||  |||||||||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||            
T  27928040 ggaaaccccctaaacaccatttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 27927941  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||  ||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  27927940 cattttagagacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgtt 27927876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 8885652 - 8885388
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  8885652 taaagagtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 8885553  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||||||||||||| | ||||||||||||||||||||  |||||||||||       ||||||||||||||||||||||||||||||||            
T  8885552 ggaaaccccctaaacacccattttcaaggtaaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 8885453  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||| ||||||||||||||| ||||||||||| || |||||||||| |||||||| ||||    
T  8885452 cattttagggacaatattaatcttcctaactctcatccttctgttttgggttattgttacctgtt 8885388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 363 - 613
Target Start/End: Original strand, 44106183 - 44106447
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  44106183 taaagggtgaaaaaatgagtaacggatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 44106282  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||||||||||||| ||||||||||||||||||||||  |||||||||||       ||||||||||||||||||||||||||||||||            
T  44106283 ggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 44106382  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||  | | ||||||||||||||| ||||||||||| || ||||||| ||||||||||| ||||    
T  44106383 cattccatggacaatattaatcttcctaactctcatccttctgttttgagtcattgttacctgtt 44106447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 42281093 - 42280826
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgtta---catgatgtttccggattatataa 459  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||   |||||||||||| ||||| ||||    
T  42281093 taaagggtgaaaaaatgagtaacggatttttccggatttcgtaatccgaaaacttcaaaaaatagagcgcgttacatcatgatgtttccagattacataa 42280994  T
Q  460 tctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca----- 548  Q
    || ||||||||||||||||| ||||||||||||||||||||||  |||||||||||       |||||||||||||| |||||||||||||||||         
T  42280993 tccggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatgcat 42280894  T
Q  549 ---cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
       ||||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  42280893 agtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgtt 42280826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 363 - 613
Target Start/End: Original strand, 34853290 - 34853552
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||    
T  34853290 taaagggtaagaaaatgagta-cgggtttttccggattttgtaatccgaaaactttaaaaaatagggcgcgttacatgatgtttccggattaca-aatct 34853387  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    |||||||| |||||||| |||||||||||||||||||| |  ||||||||||||      ||||||||||||||||||| ||||||||||||            
T  34853388 ggaaaccctctaaacaccctttttcaaggtaaaacagtccggattatataatccaaactgtatcagcacaaattctaaaaatgtttgtaacatggatagt 34853487  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  34853488 cattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgtt 34853552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 3094644 - 3094909
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| |||    
T  3094644 agggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgtttccggattacataatccgga 3094743  T
Q  466 aaccccctaaacactctttttcaaggta----aaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca------- 548  Q
    ||||||||||||||  ||||||||||||    |||||||||  |||||||||||       ||||||||||||||||||||||||||||||||           
T  3094744 aaccccctaaacaccatttttcaaggtaaaacaaacagttccgattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggataa 3094843  T
Q  549 -cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     ||||||| | ||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  3094844 tcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgtt 3094909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 366 - 584
Target Start/End: Original strand, 37248521 - 37248753
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  ||    
T  37248521 agggtgaaaaatggagttacgggtttttctggattttgtaatccgaaaacttaaaaaaatagggcgcgttagatgatgtttccggattacataatccaga 37248620  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    ||||||||||||||  ||||||||||||||||||||   ||||||||||||      |||||||||||||||||||||||||||| |||        |||    
T  37248621 aaccccctaaacaccatttttcaaggtaaaacagtttgaattatataatccgaattgtatcagcacaaattctaaacatgtttgttacatggatagtcat 37248720  T
Q  552 tttaggaacaatattaatcttcgtaactctcat 584  Q
    |||||| ||||||||||||||| ||||||||||    
T  37248721 tttagggacaatattaatcttcctaactctcat 37248753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 367 - 584
Target Start/End: Original strand, 16310563 - 16310794
Alignment:
Q  367 gggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaa 466  Q
    ||||||||||  |||| || |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||| | ||||  |||    
T  16310563 gggtgaaaaatggagttacaggtttttccggattttgtaatccggaaacttcaaaaaatagggtgcgttagatgatttttccggattacacaatccagaa 16310662  T
Q  467 accccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------catt 552  Q
    || |||||||||| ||||||||||||||||||||||| ||||||||||||      ||||||||||||||||||||||||||||||||        ||||    
T  16310663 actccctaaacaccctttttcaaggtaaaacagttcaaattatataatccgaactatatcagcacaaattctaaacatgtttgtaacatgaatagtcatt 16310762  T
Q  553 ttaggaacaatattaatcttcgtaactctcat 584  Q
    ||||| ||||||||||||||| ||||||||||    
T  16310763 ttagggacaatattaatcttcctaactctcat 16310794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 363 - 613
Target Start/End: Original strand, 28916743 - 28916999
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||| |||| |     
T  28916743 taaagggtgaaaaaatgggtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttaaatgatgtttctggattacataaacc 28916842  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||||||||||||| |||| | ||||||        || ||||||||||||      |||||||||||||||||||||||||||| |||            
T  28916843 ggaaaccccctaaacaccctttcttaaggta--------cagattatataatccgaactgtatcagcacaaattctaaacatgtttgttacatggatagt 28916934  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||| ||||||||||||||  ||||||||||| || ||||||||||||||||||| ||||    
T  28916935 cattttagggacaatattaatctttctaactctcatccttctgttttgggtcattgttacatgtt 28916999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 31520088 - 31519827
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||| |||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||| |||    
T  31520088 agggtgaaaaatggagttacggctttttccggattttgtaatccagaaacttcaaaaaatagagcgcgttacatgatgtttccggattacataatccgga 31519989  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    |||||||||||||| |||||| ||||||||| |||||  ||||||||||||      ||||||||||||| ||||| ||  ||||||||        |||    
T  31519988 aaccccctaaacacccttttttaaggtaaaatagttcggattatataatccgaactgtatcagcacaaatcctaaatataattgtaacatgtatagccat 31519889  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||| ||||||||||||||| ||||||  ||| || |||||| |||||||||||||||||    
T  31519888 tttagggacaatattaatcttcctaactcgtatccttttgtttttggtcattgttacttgtt 31519827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 21004353 - 21004608
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||| |||||||||||||||||||||| |||||| |||||||| |||||||||||| |||||||||||||| |||||| | |    
T  21004353 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaactttaaaaaataaggcgcgttacat-atgtttccggattacataatccgaa 21004451  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc-tatcagcacaaattctaaacatgtttgtaaca--------cattttag 556  Q
    ||| ||||||||||  ||||| ||||||||| |||||  |||||||||||| |||||| |||||| |||||||| |||||||||        ||||||||    
T  21004452 aactccctaaacaccattttttaaggtaaaatagttcggattatataatccgtatcagtacaaatcctaaacatatttgtaacatgtatagccattttag 21004551  T
Q  557 gaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    | ||||||||||||||| ||||||| ||| || ||||||||||||||||||| ||||    
T  21004552 ggacaatattaatcttcataactcttatccttttgttttgggtcattgttacatgtt 21004608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 363 - 613
Target Start/End: Original strand, 9073464 - 9073728
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||| ||||||||||||||||  |||| |||||||  ||||||| ||||||||||||||| |   ||||||||||||||||||||||| ||||||     
T  9073464 taaagggttaaaaaatgagtaacggactttttcggatttgttaatccggaaacttcaaaaaataagattcgttacatgatgtttccggattacataatcc 9073563  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
     ||||||||||||||||  |||||||| || ||| |||||  ||||||||| ||      ||| ||||||||||||||||||||||||||||            
T  9073564 agaaaccccctaaacaccttttttcaaagtgaaatagttcggattatataacccgaactgtattagcacaaattctaaacatgtttgtaacatggatagt 9073663  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||    
T  9073664 cattttagggacaatattaatcttcctaagtctcatccttatgttttgggtcattgttacctgtt 9073728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 416 - 580
Target Start/End: Original strand, 40994805 - 40994983
Alignment:
Q  416 ttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc 515  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||  |||||||||||    
T  40994805 ttcaaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccctttatcaaggtaaaacagttcggattatataatc 40994904  T
Q  516 c------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactc 580  Q
    |      ||||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||| ||||||    
T  40994905 cgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 40994983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 389 - 613
Target Start/End: Complemental strand, 17120053 - 17119814
Alignment:
Q  389 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttca 488  Q
    ||||| |||||| | |||||||||||||||||||||| ||||||| ||  |||| ||| ||| |||||||||||| | ||||| |||||||  |||||||    
T  17120053 ttttttcggattatataatccgaaaacttcaaaaaattgggcgcgctatttgattttttcggtttatataatctgaacaccccttaaacaccatttttca 17119954  T
Q  489 -aggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttc 573  Q
      || ||| ||||||  |||||||||||       ||||||||||||||||||| ||||||||||||        ||||||| | |||||||||||||||    
T  17119953 ttggaaaaccagttcggattatataatctgaattgtatcagcacaaattctaaatatgtttgtaacatggattgtcattttacggacaatattaatcttc 17119854  T
Q  574 gtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     ||||||||||| || |||||||| |||||||||| ||||    
T  17119853 ctaactctcatccttctgttttggatcattgttacctgtt 17119814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 486
Target Start/End: Complemental strand, 36404353 - 36404232
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||||||| |||| || |||||||||||||||||||||||  ||||||||||||||| |||||||||| ||| ||||||||||||||     
T  36404353 taaagggtgaaaaaatgagttacggattattccggattttgtaatccgaaaatctcaaaaaatagggcgtgttacatgat-ttttcggattatataatc- 36404256  T
Q  463 ggaaaccccctaaacactcttttt 486  Q
     |||| | ||||||||| ||||||    
T  36404255 cgaaaactcctaaacacccttttt 36404232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 473 - 613
Target Start/End: Complemental strand, 14164146 - 14163992
Alignment:
Q  473 taaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttagga 558  Q
    ||||||| ||||||||||||||||||||||  |||||||||||       ||||||||||||||||||||||||||||||||        |||||||||     
T  14164146 taaacaccctttttcaaggtaaaacagttcggattatataatctgaaatgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 14164047  T
Q  559 acaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||||| ||| ||||||||||| || |||||| |||||||||||| ||||    
T  14164046 acaatattaattttcctaactctcatccttctgtttttggtcattgttacctgtt 14163992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 613
Target Start/End: Original strand, 40392526 - 40392760
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttc-cggattatataatctggaaaccccctaaacactctttttcaaggta 493  Q
    |||||||| |||||| ||||||||||||||||||||| || || |||| |||  ||||| |||||||| | | || | || ||||| | ||||||||| |    
T  40392526 cggattttataatccaaaaacttcaaaaaatagggcgtgtcacttgatttttttcggatgatataatccgaacactctctgaacacccgttttcaaggga 40392625  T
Q  494 aaa-cagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaac 578  Q
    ||| ||||||  |||||||||||       ||||||||||||||||||||||||||||||||        ||||||| | ||||||||||||||| ||||    
T  40392626 aaaacagttcggattatataatctgtactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaac 40392725  T
Q  579 tctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||| ||| ||||| ||||||||||||||| |||||    
T  40392726 tcttatctttatgatttgggtcattgttagttgtt 40392760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 363 - 486
Target Start/End: Original strand, 41530629 - 41530753
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatga-tgtttccggattatataatc 461  Q
    ||||||||| |||||||||| |||| |||||||| ||||||||||||| |||  ||||||||||||||||||||||||| | ||| | ||||| ||||||    
T  41530629 taaagggtggaaaaatgagttacggatttttccgaattttgtaatccggaaatctcaaaaaatagggcgcgttacatgatttttttcagattacataatc 41530728  T
Q  462 tggaaaccccctaaacactcttttt 486  Q
    || | |||||||||| || ||||||    
T  41530729 tgaacaccccctaaaaacccttttt 41530753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 389 - 475
Target Start/End: Complemental strand, 35676711 - 35676625
Alignment:
Q  389 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaa 475  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| || ||||| ||||||||||| |||||| | | |||||||||    
T  35676711 tttttccggattttgtaatccggaaactacaaaaaatagggcgcgctatatgatttttccggattacataatccgaacaccccctaa 35676625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 397 - 466
Target Start/End: Complemental strand, 11698451 - 11698382
Alignment:
Q  397 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaa 466  Q
    |||||||||||||| ||||||||||||||| | || |||||||||||||||||||||| |||||| ||||    
T  11698451 gattttgtaatccggaaacttcaaaaaataagacgtgttacatgatgtttccggattacataatccggaa 11698382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 517 - 613
Target Start/End: Complemental strand, 36165877 - 36165773
Alignment:
Q  517 tatcagcacaaattctaaacatgtttgtaacac--------attttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    |||||||||||||| |||||||||||||||||         |||||||  ||||||||||||||| ||||||||||| || |||||||||||||||||||    
T  36165877 tatcagcacaaattgtaaacatgtttgtaacatggatagttattttagagacaatattaatcttcttaactctcatccttctgttttgggtcattgttac 36165778  T
Q  609 ttgtt 613  Q
     ||||    
T  36165777 atgtt 36165773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 613
Target Start/End: Original strand, 1076544 - 1076779
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgttt----ccggattatataatctggaaaccccctaaacactctttttcaag 490  Q
    |||||||| ||||||||||||||||||||||| || | | | | |||| |||    || |||||||||||| | | ||||| ||||||||  ||||||||    
T  1076544 cggattttataatccgaaaacttcaaaaaataaggtgtggtccttgatttttttttccagattatataatccgaacacccc-taaacacttattttcaag 1076642  T
Q  491 gtaaaa-cagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgt 575  Q
    | |||| |||||||  |||||||||||      ||| |||||||||| |||||||||||||||||        ||||||| | ||||||||||||||| |    
T  1076643 ggaaaaacagttcaatttatataatccgaattgtat-agcacaaattttaaacatgtttgtaacatgaatatccattttatggacaatattaatcttcat 1076741  T
Q  576 aactctcatcattatgttttgggtcattgttacttgtt 613  Q
    | ||||||||||| |||||||  ||||||||| |||||    
T  1076742 agctctcatcattttgttttgcatcattgttagttgtt 1076779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 486
Target Start/End: Complemental strand, 7971193 - 7971073
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatg-tttccggattatataatctgg 464  Q
    |||||||||||  |||| |||| |||||||||||||||||||| | |||||||| |||||||| |||| ||| ||||| |||| |||||| ||||||       
T  7971193 agggtgaaaaacggagttacggatttttccggattttgtaatctggaaacttca-aaaataggacgcgctacgtgatgttttctggattacataatccaa 7971095  T
Q  465 aaaccccctaaacactcttttt 486  Q
    | ||||| ||||||| ||||||    
T  7971094 acaccccataaacacccttttt 7971073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 517 - 613
Target Start/End: Original strand, 40328017 - 40328121
Alignment:
Q  517 tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    |||||||| |||| ||||||||||||||||||        ||||||| | | ||||||||||||| ||||||||||| || |||||||||| ||||||||    
T  40328017 tatcagcataaatactaaacatgtttgtaacatggattgtcattttatggataatattaatcttcctaactctcatctttctgttttgggttattgttac 40328116  T
Q  609 ttgtt 613  Q
     ||||    
T  40328117 ctgtt 40328121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 548
Target Start/End: Complemental strand, 4259788 - 4259643
Alignment:
Q  411 aaaacttcaaaaaa-tagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaa-ggtaaaacagttcatatta 508  Q
    |||||||||||||| ||||||| ||| | |||| ||| ||||||||||||| ||   |||||||||||||  |||||||| || |||| | |||  ||||    
T  4259788 aaaacttcaaaaaaatagggcgtgttccttgattttttcggattatataatttgagcaccccctaaacaccatttttcaagggaaaaataattcggatta 4259689  T
Q  509 tataatc------ctatcagcacaaattctaaacatgtttgtaaca 548  Q
    |||||||       |||||||||||||||||| |||||||||||||    
T  4259688 tataatctgaactgtatcagcacaaattctaagcatgtttgtaaca 4259643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 479
Target Start/End: Original strand, 33472059 - 33472143
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacac 479  Q
    |||||| | |||||||||||| ||||||||||||||||| ||  |||| ||| ||||||||| |||||    |||||||||||||    
T  33472059 cggattctataatccgaaaacctcaaaaaatagggcgcgctatttgattttttcggattatagaatctaaccaccccctaaacac 33472143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 437
Target Start/End: Complemental strand, 10840923 - 10840881
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttac 437  Q
    |||||||| |||||||||||| |||||||||||||||| ||||    
T  10840923 cggattttataatccgaaaacctcaaaaaatagggcgcattac 10840881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 607
Target Start/End: Complemental strand, 11698315 - 11698257
Alignment:
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    ||||||||| | ||||||||||||| ||||||||||| ||  ||||| |||||||||||    
T  11698315 cattttagggataatattaatcttcctaactctcatccttccgtttttggtcattgtta 11698257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 515
Target Start/End: Original strand, 6395075 - 6395196
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaa 494  Q
    |||||||| |||||| ||||| |||||||||||| |||| ||| | || ||| | ||| ||||||||   | | ||| ||||||| ||||||||||| ||    
T  6395075 cggattttataatccaaaaacctcaaaaaataggacgcgctacttaattttttctgatcatataatccaaacaacccttaaacaccctttttcaaggaaa 6395174  T
Q  495 a-acagttcatattatataatc 515  Q
    | ||||| || |||||||||||    
T  6395175 agacagtgcaaattatataatc 6395196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 613
Target Start/End: Original strand, 1374108 - 1374164
Alignment:
Q  557 gaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||| ||||||||| |  ||||||||||| ||||||||| ||||||||||| |||||    
T  1374108 gaactatattaatcattctaactctcatccttatgttttaggtcattgttagttgtt 1374164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 4e-83; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 363 - 613
Target Start/End: Original strand, 19835488 - 19835752
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||| |||||||||||||||||||||||| ||||||     
T  19835488 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaactttgaaaaatagggtgcgttacatgatgtttccggattacataatcc 19835587  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||            
T  19835588 ggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 19835687  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||||| ||||||||||| ||||    
T  19835688 cattttaggaacaatattaatcttcctaactctcatctttctgttttgcgtcattgttacctgtt 19835752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 17933336 - 17933072
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||| |||||||| |||||| ||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17933336 taaagggtgcaaaaatgaataacggatttttccagattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatct 17933237  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||||| ||||||| |||||| |||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||            
T  17933236 ggaaaccccttaaacacccttttttaaggtaaaacagttcggattatataatccgaacagtatcagcacaaattctaaacatgtttgtaacatggataat 17933137  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||| ||| ||||||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  17933136 cattttagggacattattaatcttcctaactctcatccttctgttttgggtcattgttacctgtt 17933072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 25491594 - 25491330
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||     
T  25491594 taaagggtgaaaaaatgagtaacgagttttttcggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatcc 25491495  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    |||||||||||||||||  ||||||||||||||||| |||  |||||||||||       ||||||||||||||||||||||||||||||||            
T  25491494 ggaaaccccctaaacaccttttttcaaggtaaaacaattcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagt 25491395  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||| | ||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  25491394 cattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgtt 25491330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 363 - 607
Target Start/End: Original strand, 40703631 - 40703890
Alignment:
Q  363 taaagggtgaaaa-aatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 461  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||||||||| || ||||||||||||||||||||| |||| |    
T  40703631 taaagggtgaaaagaatgagtaacggatttttccggattttgtaatccggaaatttcaaaaaatagggtgcattacatgatgtttccggattacataacc 40703730  T
Q  462 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca------- 548  Q
    || ||||||||||||||| ||||||||||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||           
T  40703731 tgaaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatag 40703830  T
Q  549 -cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
     ||||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  40703831 tcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgtta 40703890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 363 - 607
Target Start/End: Complemental strand, 48319263 - 48319005
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||||||| |||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||     
T  48319263 taaagggtgaaaaaatgagtgacggatttttccggattt-gtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataatcc 48319165  T
Q  463 ggaaaccccctaaaca-ctctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca------- 548  Q
    | |||||||||||||| || |||||||||||||||||| ||  ||||||||||||      ||||||||||||||||||||||||||||||||           
T  48319164 gaaaaccccctaaacacctttttttcaaggtaaaacagctcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatag 48319065  T
Q  549 -cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
     ||||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  48319064 tcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgtta 48319005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 363 - 613
Target Start/End: Original strand, 7931626 - 7931888
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||     
T  7931626 taaagggtgaaaaaatgagtaacgggtttttccggattttgcaatccggaaacttcaaaaaatagggcgcgttacattatgtttccggattacataatcc 7931725  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||||||||||||| | || |||| ||||||||||||  |||||||||||       ||| ||||||||||||||||||||||||||||            
T  7931726 ggaaaccccctaaacac-ccttctcaatgtaaaacagttcggattatataatctgaactatattagcacaaattctaaacatgtttgtaacatggatagt 7931824  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     |||||||| ||||||||||||||| |||||||||||  | ||||||||||||||||||| ||||    
T  7931825 tattttagggacaatattaatcttcctaactctcatc-ctctgttttgggtcattgttacatgtt 7931888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 366 - 548
Target Start/End: Complemental strand, 55052815 - 55052627
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| ||||||||||||||||| ||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||| |||    
T  55052815 agggtgaaaaatggagttacgggtttttccggattatgtaatccggaaacttcaaaaaatagggcgtgttagatgatgtttccggattatataatccgga 55052716  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca 548  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||    
T  55052715 aaccccctaaacaccctttttcaaggtaaaacagttcgaattatataatccgaactttatcagcacaaattctaaacatgtttgtaaca 55052627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 372 - 608
Target Start/End: Complemental strand, 46440464 - 46440214
Alignment:
Q  372 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 471  Q
    ||||||||| ||||||||||||||| ||||| ||||||| |||||| |||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  46440464 aaaaaatgaataacgggtttttccgaattttataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaacccc 46440365  T
Q  472 ctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttagg 557  Q
    |||||||| ||||||||||||||||||||||  ||||||||||||      ||||||||||||||||||||||| ||||||||        |||||||||    
T  46440364 ctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactatatcagcacaaattctaaacatggttgtaacatggatattcattttagg 46440265  T
Q  558 aacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
     |||||| |||||||| ||||||||||| || | |||| | ||||||||||    
T  46440264 gacaatactaatcttcataactctcatccttctcttttagatcattgttac 46440214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 2506232 - 2505966
Alignment:
Q  363 taaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaata-gggcgcgttacatgatgtttccggattatataat 460  Q
    ||||||||||||||| |||||||||| |||||||  ||||||| || |  |||| |||||||||| |||||||||||||||||||||||||||| |||||    
T  2506232 taaagggtgaaaaaaatgagtaacggatttttccaaattttgtgattcagaaacatcaaaaaataagggcgcgttacatgatgtttccggattacataat 2506133  T
Q  461 ctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca------ 548  Q
    | ||||||||||||||||| |||||||||||||||||||||   ||||||||||||      |||||||||||||| |||||||||||||||||          
T  2506132 ccggaaaccccctaaacaccctttttcaaggtaaaacagtttggattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggata 2506033  T
Q  549 --cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
      ||||||||| ||||||||||||||| ||| ||||||| || ||||||||||||||||||| ||||    
T  2506032 gtcattttagggacaatattaatcttcctaattctcatccttctgttttgggtcattgttacatgtt 2505966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 38536141 - 38536403
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||   ||| |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| ||||| |||||| |||    
T  38536141 agggtgaaaaatgaagttacgggtttttccggattttgtaattcggaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccgga 38536240  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    ||||||||||||||  |||||||||||||||||||||  |||||||||||       |||| |||||||||||||||||||||||||||        |||    
T  38536241 aaccccctaaacaccttttttcaaggtaaaacagttcggattatataatctaaattgtatctgcacaaattctaaacatgtttgtaacatgaatagtcat 38536340  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatg-ttttgggtcattgttacttgtt 613  Q
    |||| | ||||||||||||||| |||||||||| ||| || |||| |||||||||||| ||||    
T  38536341 tttatggacaatattaatcttcctaactctcattattctgtttttaggtcattgttacatgtt 38536403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 363 - 515
Target Start/End: Complemental strand, 54631662 - 54631509
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| ||||||     
T  54631662 taaagggtggaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaagtatggcgcgttacatgatgtttccggattacataatcc 54631563  T
Q  463 ggaaaccccctaaacac-tctttttcaaggtaaaacagttcatattatataatc 515  Q
    ||||||||||||||||| | |||||||||||||||||||||  |||||| ||||    
T  54631562 ggaaaccccctaaacacatttttttcaaggtaaaacagttcggattatacaatc 54631509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 372 - 613
Target Start/End: Complemental strand, 25752634 - 25752378
Alignment:
Q  372 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 471  Q
    ||||||||||||| || |||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||| |||||| | |||||||    
T  25752634 aaaaaatgagtaatggatttttccggattttgtaatccggaaatttcaaaaaatagggcgcattacatgatgtttccagattacataatccgaaaacccc 25752535  T
Q  472 ctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttagg 557  Q
     ||||||| ||||||||||||||||||||||  ||||||| ||||      ||| ||||||||||||||||||||||||||||        ||||||| |    
T  25752534 ataaacaccctttttcaaggtaaaacagttcggattatatgatccgaaatgtattagcacaaattctaaacatgtttgtaacatggatagtcattttaag 25752435  T
Q  558 aacaatattaatcttcgtaactctcatcattatg-ttttgggtcattgttacttgtt 613  Q
     ||||||| ||||||| || |||||||| ||||| |||||||| |||||||| ||||    
T  25752434 gacaatatcaatcttcctagctctcatctttatgtttttgggtgattgttacctgtt 25752378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 366 - 543
Target Start/End: Original strand, 29822590 - 29822773
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||| |||||| |||    
T  29822590 agggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatacagcgcgttacatgatgttttcggattacataatccgga 29822689  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttg 543  Q
    |||||| ||||||| || ||||||||||||||| |||  ||||||||||||      |||||||||||||||||||||||||||    
T  29822690 aaccccataaacaccctctttcaaggtaaaacaattcggattatataatccgaactgtatcagcacaaattctaaacatgtttg 29822773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 412 - 613
Target Start/End: Complemental strand, 41413249 - 41413033
Alignment:
Q  412 aaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttc--atattat 509  Q
    |||||||||||||||||  |||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||| |||||  ||  |||    
T  41413249 aaacttcaaaaaatagga-gcgttacatgatgtttccggattacataatccggaaaccccctaaacactcttttttaaggtaaaatagttcggattatat 41413151  T
Q  510 ataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgtttt 595  Q
    |||||||      ||||||||||||| |||||||| |||||||||        ||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  41413150 ataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcattttaggaacaatattaatcttcctaactcttatcattttgtttt 41413051  T
Q  596 gggtcattgttacttgtt 613  Q
     |||||||||||| ||||    
T  41413050 aggtcattgttacatgtt 41413033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 366 - 608
Target Start/End: Complemental strand, 3703446 - 3703189
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| || |||||||||| ||| ||||||| |||||  | |    
T  3703446 agggtgaaaaaatgagttacggattttttcggattttgtaatccgaaaacttcaaaaaataggacgtgttacatgattttttcggattacataattcgaa 3703347  T
Q  466 aaccccctaaacactctttttcaa-ggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------ca 550  Q
     |||||||||||||  |||||||| || |||||||||    ||||||||| |      |||||||||||||||||||||| |||||||||        ||    
T  3703346 caccccctaaacaccatttttcaagggaaaaacagttatggttatataattcaaactgtatcagcacaaattctaaacatttttgtaacatagatagtca 3703247  T
Q  551 ttttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    ||||||||| ||||||||||||| ||||||||||| || |||||| ||||| ||||||    
T  3703246 ttttaggaagaatattaatcttcataactctcatccttctgttttaggtcaatgttac 3703189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 390 - 613
Target Start/End: Original strand, 8106387 - 8106626
Alignment:
Q  390 ttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttc-a 488  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||| |||||| | | |||||||||||||  |||||| |    
T  8106387 ttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgctacatgatttttccgtattacataatccgaacaccccctaaacaccatttttcta 8106486  T
Q  489 aggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttag-gaacaatattaatcttc 573  Q
     || |||| |||||| ||||||||||||      |||||||||||||| |||||||||||||||||        |||||||| ||||||| ||||||||     
T  8106487 gggaaaaatagttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagaacaatgttaatcttt 8106586  T
Q  574 gtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     ||||||||||| || ||||||| ||||||||||| ||||    
T  8106587 ctaactctcatccttctgttttgagtcattgttacctgtt 8106626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 424 - 613
Target Start/End: Complemental strand, 31582560 - 31582357
Alignment:
Q  424 atagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ct 517  Q
    ||||||||| ||||||||||||| | ||||| |||||| ||||||||||||||||| ||||||||||||||||||||||  |||||||||||       |    
T  31582560 atagggcgcattacatgatgttttctgattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatctgaattgt 31582461  T
Q  518 atcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttact 609  Q
    |||||||||||||||||||||||||||||||        ||||||| ||||||| ||||| ||| ||||||||||| || |||||||||||||||||||     
T  31582460 atcagcacaaattctaaacatgtttgtaacatggatagtcattttatgaacaatgttaattttcctaactctcatccttctgttttgggtcattgttaca 31582361  T
Q  610 tgtt 613  Q
    ||||    
T  31582360 tgtt 31582357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 366 - 548
Target Start/End: Original strand, 23523877 - 23524066
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||| ||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||  ||    
T  23523877 agggtgaaaaatggagttacggattttttcggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccaga 23523976  T
Q  466 aaccccctaaacactc-tttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca 548  Q
    |||||||||||||| | ||||| ||||||||| | |||  ||||||||||||      ||||||||||||| |||||||| |||||||||    
T  23523977 aaccccctaaacaccctttttttaaggtaaaataattcggattatataatccacactgtatcagcacaaatcctaaacatatttgtaaca 23524066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 368 - 493
Target Start/End: Complemental strand, 25539142 - 25539017
Alignment:
Q  368 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaa 467  Q
    |||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||| |||||| |||||| |||||    
T  25539142 ggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcatgttacatgatgtttctggattacataatccggaaa 25539043  T
Q  468 ccccctaaacactctttttcaaggta 493  Q
    ||||||||||||| ||||||||||||    
T  25539042 ccccctaaacactatttttcaaggta 25539017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 32441782 - 32442042
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| | || |||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||| |||    
T  32441782 agggtgaaaaatggagttaaggatttttctggattttgtaatccggaaacttcaaaaaatagcgcgcgttacatgatgtttccggattacataatccgga 32441881  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    || |||||||||||  ||||| ||||||||| |||||  ||||||||||||      || ||||||| ||  ||||||| |||||||||        |||    
T  32441882 aa-cccctaaacacatttttttaaggtaaaatagttcggattatataatccaaactgtaccagcacatatcgtaaacatatttgtaacatgtataaccat 32441980  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||   ||||||||||||||| ||||||| ||| || ||||||||||||||||||| ||||    
T  32441981 tttaaagacaatattaatcttcctaactcttatccttttgttttgggtcattgttacctgtt 32442042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 395 - 607
Target Start/End: Original strand, 34972864 - 34973090
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaa 494  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||||||| |||| || |||||| | |||||||||||||||  ||||| |||||||    
T  34972864 cggattttgtaatctggaaacttaaaaaaatagggcgcgttacatgatgttttcggactacataatccgaaaaccccctaaacaccattttttaaggtaa 34972963  T
Q  495 aacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactc 580  Q
    || |||||  ||||||||||||      |||||||| |||| |||||||| |||||||||        ||||||||| ||||||||||||||| ||||||    
T  34972964 aatagttcggattatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 34973063  T
Q  581 tcatcattatgttttgggtcattgtta 607  Q
    | ||| || |||||| |||||||||||    
T  34973064 ttatccttttgttttaggtcattgtta 34973090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 6229007 - 6228748
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||  |||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||   |||  |||    
T  6229007 agggtgaaaaatggagctacggatttttccggattttgtaacccggaaacttcaaaaaatagggcgcgttacatgatgtttccggatta---aattcgga 6228911  T
Q  466 aaccccctaaacactc--tttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------c 549  Q
    || ||||||||||| |  ||||| ||||||||| |||||  ||||||||||||      ||||| | ||||| ||||| || || ||||||        |    
T  6228910 aa-cccctaaacacccctttttttaaggtaaaatagttcggattatataatccgaactgtatcaactcaaatcctaaagatattagtaacatgtatagcc 6228812  T
Q  550 attttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||||| ||||||||||||||| ||||||| ||| || ||||||||||||||||||| ||||    
T  6228811 attttagggacaatattaatcttcctaactcttatccttttgttttgggtcattgttacctgtt 6228748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 6003869 - 6003608
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaat--agggcgcgttacatgatgtttccggattatataatctg 463  Q
    |||||||||||  |||| |||| ||||| || ||||| ||||||| |||||| ||||||   || | |||||||||||||||||||||||| |||||| |    
T  6003869 agggtgaaaaatggagttacggattttttcgaattttataatccggaaacttaaaaaaaataagagtgcgttacatgatgtttccggattacataatccg 6003770  T
Q  464 gaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------c 549  Q
    |||||||||||||||| |||||| ||||||||| |||||  ||||||||||||      |||| ||||||||  ||||||| ||| ||| |        |    
T  6003769 gaaaccccctaaacac-cttttt-aaggtaaaatagttcggattatataatccgaactgtatcggcacaaatcataaacatatttttaatatgtatagtc 6003672  T
Q  550 attttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||||| | ||||||||||||| ||||||| ||| || ||||||||||||||||||||||||    
T  6003671 attttagggataatattaatcttcctaactcttatccttttgttttgggtcattgttacttgtt 6003608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 53894190 - 53894108
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtt 445  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  53894190 taaagggtgaaaaaatgactaacgggtttttccggattttgcaatcaggaaacttcaaaaaatagggcgcgttacatgatgtt 53894108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 49396979 - 49397244
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||| |||||||||||||||||||||| |||||||||||||||||  |||||||| |||||||  |||||| |||||| | |    
T  49396979 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaataggatgcgttacaagatgtttttggattacataatccgaa 49397078  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca----------- 548  Q
    || ||| ||||||   ||||| || |||||| |||||  ||||||||| ||      |||||||| |||| |||||||| |||||||||               
T  49397079 aatcccttaaacatcattttttaatgtaaaatagttcggattatataaaccgaactgtatcagcaaaaatcctaaacatatttgtaacatgtataaccat 49397178  T
Q  549 -cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     ||||||||| ||||||||||||||| ||||||| ||| || ||||||| ||||||||||| ||||    
T  49397179 ccattttagggacaatattaatcttcctaactcttatccttttgttttgagtcattgttacatgtt 49397244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 517 - 613
Target Start/End: Complemental strand, 53894064 - 53893960
Alignment:
Q  517 tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    ||||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||  ||||||||||| || |||||||||||||||||||    
T  53894064 tatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatctttctaactctcatccttctgttttgggtcattgttac 53893965  T
Q  609 ttgtt 613  Q
     ||||    
T  53893964 ctgtt 53893960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 366 - 480
Target Start/End: Original strand, 38416536 - 38416650
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||||||||  ||| ||||| |  ||||||||||||| |||| | |||||||||||| ||||||||||| ||| ||||||| |||||| | |    
T  38416536 agggtgaaaaaatgagttgcggattttttcaaattttgtaatccggaaacataaaaaaatagggcacgttacatgattttttcggattacataatccgaa 38416635  T
Q  466 aaccccctaaacact 480  Q
     ||||||||||||||    
T  38416636 caccccctaaacact 38416650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 50392599 - 50392529
Alignment:
Q  372 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 442  Q
    ||||||||||| |||| |||||||||||||||||||||| |||  ||||||||| ||||||||||||||||    
T  50392599 aaaaaatgagttacggatttttccggattttgtaatccggaaatctcaaaaaatggggcgcgttacatgat 50392529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 517 - 613
Target Start/End: Complemental strand, 41323131 - 41323027
Alignment:
Q  517 tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    ||||| ||||||||||||||||||||||||||        ||||||| | ||||||||||||||| ||||||||||| || |||||| |||||||||||     
T  41323131 tatcaacacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaactctcatccttttgtttttggtcattgttaa 41323032  T
Q  609 ttgtt 613  Q
    |||||    
T  41323031 ttgtt 41323027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 517 - 608
Target Start/End: Complemental strand, 25539018 - 25538918
Alignment:
Q  517 tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatg-ttttgggtcattgtta 607  Q
    ||||||||||||||||||||||||||||||||        ||||||||| ||||||||||| ||| ||||||||||| ||  | ||||||||||||||||    
T  25539018 tatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcttaactctcatccttccgtttttgggtcattgtta 25538919  T
Q  608 c 608  Q
    |    
T  25538918 c 25538918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 554 - 613
Target Start/End: Complemental strand, 54631486 - 54631427
Alignment:
Q  554 taggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||| ||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  54631486 tagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgtt 54631427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 444 - 514
Target Start/End: Original strand, 52077012 - 52077082
Alignment:
Q  444 tttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataat 514  Q
    ||||||||| | |||||| ||||||| |||||| ||  |||||||||||||||||||||| ||||||||||    
T  52077012 tttccggatcacataatccggaaacctcctaaataccatttttcaaggtaaaacagttcagattatataat 52077082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 517 - 604
Target Start/End: Complemental strand, 27742153 - 27742057
Alignment:
Q  517 tatcagcacaaattctaaacatgtttgtaacaca--------ttttagg-aacaatattaatcttcgtaactctcatcattatgttttgggtcattg 604  Q
    |||||||||||||| ||||||||||||||||| |        ||||||| |||||||||||||||| ||||||||||| || ||||||| |||||||    
T  27742153 tatcagcacaaattttaaacatgtttgtaacataaatagttattttagggaacaatattaatcttcctaactctcatccttctgttttgagtcattg 27742057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 608
Target Start/End: Original strand, 47873978 - 47874037
Alignment:
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    ||||||||| ||||||||||||||| ||| ||||||| || |||||||| ||||||||||    
T  47873978 cattttagggacaatattaatcttcttaattctcatccttctgttttggatcattgttac 47874037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 562 - 613
Target Start/End: Original strand, 1788175 - 1788226
Alignment:
Q  562 atattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||||||||| ||||||||||  || |||||| |||||||||||||||||    
T  1788175 atattaatcttcataactctcattcttctgttttaggtcattgttacttgtt 1788226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 562 - 613
Target Start/End: Complemental strand, 42497862 - 42497811
Alignment:
Q  562 atattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||||||||  |||||||||||||| |||||| ||||||||||| |||||    
T  42497862 atattaatctttctaactctcatcattttgttttaggtcattgttagttgtt 42497811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 595
Target Start/End: Complemental strand, 25140505 - 25140459
Alignment:
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgtttt 595  Q
    ||||||| ||||||||||||||||| ||||||||||| |||| ||||    
T  25140505 cattttaagaacaatattaatcttcctaactctcatccttatctttt 25140459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 613
Target Start/End: Complemental strand, 14474208 - 14474147
Alignment:
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||| ||||||||||||||||| |||| |||||| || | |||| |||||||||||| ||||    
T  14474208 tttaagaacaatattaatcttcctaaccctcatccttctattttaggtcattgttacctgtt 14474147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 562 - 607
Target Start/End: Original strand, 47456781 - 47456826
Alignment:
Q  562 atattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    |||||||||||| ||| ||||||| ||||||||| |||||||||||    
T  47456781 atattaatcttcctaaatctcatccttatgttttaggtcattgtta 47456826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 435
Target Start/End: Complemental strand, 5865248 - 5865208
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgtt 435  Q
    |||||||| ||||| ||||| ||||||||||||||||||||    
T  5865248 cggattttataatctgaaaatttcaaaaaatagggcgcgtt 5865208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 55781542 - 55781602
Alignment:
Q  75 ttagacttgtaactttggttttctcttaagatatgtagtataccgcaacaagtcccacatc 135  Q
    ||||||||| ||||||| |||||| || |||  ||| ||||||| ||||||||||||||||    
T  55781542 ttagacttgaaactttgattttcttttcagacgtgtggtataccacaacaagtcccacatc 55781602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 55845722 - 55845782
Alignment:
Q  75 ttagacttgtaactttggttttctcttaagatatgtagtataccgcaacaagtcccacatc 135  Q
    ||||||||| ||||||| |||||| || |||  ||| ||||||| ||||||||||||||||    
T  55845722 ttagacttgaaactttgattttcttttcagacgtgtggtataccacaacaagtcccacatc 55845782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 146; Significance: 1e-76; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 363 - 606
Target Start/End: Complemental strand, 28230666 - 28230410
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||     
T  28230666 taaagggt-aaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacttgatgtttccggattacataatcc 28230568  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||            
T  28230567 ggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 28230468  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtt 606  Q
    ||||||| | ||||||||||||||| ||||||||||| || |||||||||||||||||    
T  28230467 cattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgtt 28230410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 363 - 608
Target Start/End: Original strand, 3936068 - 3936327
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  3936068 taaagagtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 3936167  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
      ||||||||||||||| |||||||||||||||||||| |  ||||||||||||      ||| |||||||||| |||||||||||||||||            
T  3936168 aaaaaccccctaaacaccctttttcaaggtaaaacagtccgaattatataatccgaaatgtattagcacaaattgtaaacatgtttgtaacatggataat 3936267  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    ||||||||| ||||||||||||||| ||||||||||| || | |||||||||||||||||    
T  3936268 cattttagggacaatattaatcttcctaactctcatccttctattttgggtcattgttac 3936327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 368 - 613
Target Start/End: Complemental strand, 36468730 - 36468472
Alignment:
Q  368 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaa 467  Q
    |||||||||||||||||||| |||||||||||||||||||  | |||||||||||||||||||| |||||||||||||| | ||||| |||||| |||||    
T  36468730 ggtgaaaaaatgagtaacggatttttccggattttgtaatatggaaacttcaaaaaatagggcgtgttacatgatgttt-cagattacataatccggaaa 36468632  T
Q  468 ccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattt 553  Q
    |||||||||||| |||||||||||||||||||||   ||||||||||||      ||||||||||||||||||||||||||||||||        |||||    
T  36468631 ccccctaaacaccctttttcaaggtaaaacagtttgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattt 36468532  T
Q  554 taggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  36468531 taggaacaatattaatcttcataactctcatccttctgttttgggtcattgttacatgtt 36468472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 363 - 610
Target Start/End: Complemental strand, 37518494 - 37518233
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||| |||||||| |||||||||||||| ||||||  |||||||||||||||||||| ||||||||| |||||||||||| ||||||     
T  37518494 taaagggtgaaaaaataagtaacggatttttccggattttataatccagaaacttcaaaaaatagggcgtgttacatgaagtttccggattacataatcc 37518395  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    |||||||||||||||||  |||||||||||||||||||||  ||||||||||||      |||||||| |||||||||||||||||||||||            
T  37518394 ggaaaccccctaaacaccatttttcaaggtaaaacagttcggattatataatccgaactgtatcagcataaattctaaacatgtttgtaacagagatagt 37518295  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttactt 610  Q
    ||||||||||||| ||||||||||| ||||||||||| || |||||| ||||||||||||||    
T  37518294 cattttaggaacactattaatcttcctaactctcatccttctgttttaggtcattgttactt 37518233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 366 - 585
Target Start/End: Complemental strand, 24042384 - 24042151
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||| |||    
T  24042384 agggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaataaggcgcgttacatgatgtttccggattacataatccgga 24042285  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    ||||||||||||||  |||||||||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||        |||    
T  24042284 aaccccctaaacaccatttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagtcat 24042185  T
Q  552 tttaggaacaatattaatcttcgtaactctcatc 585  Q
    |||||| ||||||| ||||||| |||||||||||    
T  24042184 tttagggacaatatcaatcttcctaactctcatc 24042151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 42925837 - 42925575
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||| |||    
T  42925837 agggtgaaaaatggagttacgggtttttcctgattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgttttcggattacataatccgga 42925738  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    ||||||||||||||  |||||||||||||||||||||  |||||||||| |      ||||||||||||||||||||||||||||||||        |||    
T  42925737 aaccccctaaacaccttttttcaaggtaaaacagttcggattatataatacgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcat 42925638  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatg-ttttgggtcattgttacttgtt 613  Q
    |||||| ||||||||||||||| ||||||||||| ||  | |||||| |||||||||||||||    
T  42925637 tttagggacaatattaatcttcctaactctcatccttccgtttttggatcattgttacttgtt 42925575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 366 - 608
Target Start/End: Original strand, 36629168 - 36629422
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  ||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  36629168 agggtgaaaaaatgagtaacggatttttccggattttgtaatctggtaacttaaaaaaatagggcgcgttacatgatgtttccggattacataatctgga 36629267  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca------cattt 553  Q
    ||||| ||||||||  ||||| |||||||||||||||  ||||||||||||      ||||||| |||||| ||||||||||||| |||      |||||    
T  36629268 aaccctctaaacaccattttttaaggtaaaacagttcggattatataatccgaactgtatcagcgcaaattttaaacatgtttgttacatgtcgtcattt 36629367  T
Q  554 taggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    |||| | ||||||||||||| ||||||||||| || |||||||| ||| ||||||    
T  36629368 tagggagaatattaatcttcctaactctcatccttctgttttggctcactgttac 36629422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 358 - 613
Target Start/End: Original strand, 36408325 - 36408595
Alignment:
Q  358 cttggtaaagggtgaaaa-aatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattata 456  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||| |||||||||||||||||||| |    
T  36408325 cttgttaaagggtgaaaaaaatgagtaacggatttttccggattttgtaatccagaaacttcaaaaaataaggcgcgatacatgatgtttccggattaca 36408424  T
Q  457 taatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-- 548  Q
    ||||| ||||||| | |||||||  | |||||||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||      
T  36408425 taatccggaaacctcataaacaccatctttcaaggtaaaacagttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatg 36408524  T
Q  549 ------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
           |||||||| ||||||||||||||| |||||||| |  || ||||||||||||||||||| ||||    
T  36408525 gatagtaattttagggacaatattaatcttcttaactctctttcttctgttttgggtcattgttacgtgtt 36408595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 366 - 602
Target Start/End: Original strand, 47202457 - 47202707
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  47202457 agggtgaaaaatggagttacggatttttccagattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgga 47202556  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    |||||||||||||| |||||| ||||||||| |||||  ||||||||||||      ||||||||||||| |||||||| |||||||||        | |    
T  47202557 aaccccctaaacacccttttttaaggtaaaatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccgt 47202656  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcat 602  Q
    |||||| ||||||||||||||| ||||||| ||| || |||||||||||||    
T  47202657 tttagggacaatattaatcttcctaactcttatccttttgttttgggtcat 47202707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 363 - 608
Target Start/End: Complemental strand, 19225798 - 19225538
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggttttt-ccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 461  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  19225798 taaagggtgaaaaaatgagtaacggattttttccggattttgtaatccaaaaacttcaaaaaatagggtgcgttacatgatgtttccggattacataatc 19225699  T
Q  462 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca------- 548  Q
     ||||| |||||||||||  ||||||||| ||||||| |||  |||||||||||       ||||||||||||||||||||||||||||||||           
T  19225698 cggaaatcccctaaacaccatttttcaagataaaacaattcggattatataatctgaacggtatcagcacaaattctaaacatgtttgtaacatggatat 19225599  T
Q  549 -cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
     ||||||| | |  |||| ||||||| ||||||||||| || |||||||||||||||||||    
T  19225598 tcattttatggatgatataaatcttcctaactctcatccttctgttttgggtcattgttac 19225538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 363 - 514
Target Start/End: Original strand, 43737084 - 43737234
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||     
T  43737084 taaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatcc 43737183  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataat 514  Q
    ||||||||||||||||| |||||| ||||||||| |||||  ||||||||||    
T  43737184 ggaaaccccctaaacacccttttt-aaggtaaaatagttcggattatataat 43737234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 384 - 613
Target Start/End: Original strand, 8154880 - 8155123
Alignment:
Q  384 acgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctt 483  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||| |||    
T  8154880 acggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaaaaccccctaaacaccctt 8154979  T
Q  484 tttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaat 569  Q
    ||| ||||||||| |||||  |||||||||||      |||||||||||||| |||||||| |||||||||        ||||||||| ||||||| |||    
T  8154980 ttttaaggtaaaatagttcggattatataatctaaactctatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatcaat 8155079  T
Q  570 cttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||| || |||| ||| || |||||| ||||||| |||| ||||    
T  8155080 cttcctagctcttatccttttgtttttggtcattattacctgtt 8155123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 362 - 613
Target Start/End: Original strand, 9151773 - 9152020
Alignment:
Q  362 gtaaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 461  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||                  |||| ||||||    
T  9151773 gtaaagggtgaaaaaatgagtaacaggtttttccggattttgtaatccggaaacttcaaaaaatagggcgc------------------attacataatc 9151854  T
Q  462 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca------- 548  Q
     ||||||||||||||||  |||||||||||||||||||| || ||||||||||||      ||||||||||||||||||||||||||||||||           
T  9151855 cggaaaccccctaaacatcctttttcaaggtaaaacagtccagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatag 9151954  T
Q  549 -cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     ||||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  9151955 tcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgtt 9152020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 3304955 - 3304693
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaa-tagggcgcgttacatgatgtttccggattatataatctgg 464  Q
    |||||||||||  |||| |||| |||||||||||||||||||||  ||||||||||||| ||||| | |||||||||| ||||||||||| ||||||       
T  3304955 agggtgaaaaatggagttacggatttttccggattttgtaatccagaaacttcaaaaaaatagggtgtgttacatgatatttccggattacataatccaa 3304856  T
Q  465 aaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------ca 550  Q
    |||||||| |||||| |||||  ||||||||| |||||  ||||||||||||      ||||||||||||| |||||||| |||||||||        ||    
T  3304855 aaaccccccaaacacccttttctaaggtaaaatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataacca 3304756  T
Q  551 ttttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||| ||||||||||||||| ||||||| |||||| ||||||||||||||||||| ||||    
T  3304755 ttttagggacaatattaatcttcctaactcttatcattttgttttgggtcattgttacctgtt 3304693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 31643004 - 31643265
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||| |||||| |||| |||||||  | |||||||||||||||||| | |||||||||||||||||||||| |||||| |||    
T  31643004 agggtgaaaaatggagttacggatttttctggatcttgtaatttggaaacttcaaaaaatagggtgtgttacatgatgtttccggattacataatccgga 31643103  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc----ct--atcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    ||||||| |||||| |||||| ||||||||| |||||  |||||||||||    ||  ||||||| |||| |||||||| ||| |||||         ||    
T  31643104 aaccccccaaacacccttttttaaggtaaaatagttcggattatataatctgaactggatcagcataaatcctaaacatatttttaacatgtatagctat 31643203  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||| ||||||||||||||| ||||||| ||| || ||||||||||||||||||| ||||    
T  31643204 tttagggacaatattaatcttcctaactcttatccttttgttttgggtcattgttacatgtt 31643265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 363 - 607
Target Start/End: Original strand, 33151167 - 33151421
Alignment:
Q  363 taaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaa-aatagggcgcgttacatgatgtttccggattatataat 460  Q
    ||||||||||||||| |||| ||||| |||||   ||||||||||| || |||||| |||| |||||||||| ||| ||||||| | ||||||| |||||    
T  33151167 taaagggtgaaaaaaatgaggaacggattttta--gattttgtaattcggaaacttaaaaaaaatagggcgcattatatgatgtcttcggattacataat 33151264  T
Q  461 ctggaaaccccctaaacactc-tttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--cat 551  Q
    | ||||| ||||||||||||| ||||| |||||||||||||||  |||||||||| |      ||||||||||||||||||||||||||||||||   ||    
T  33151265 ccggaaatcccctaaacactcattttttaaggtaaaacagttcggattatataattcgaactgtatcagcacaaattctaaacatgtttgtaacatgaat 33151364  T
Q  552 -tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
      ||||| ||||||||||||||| ||||||||||| || | ||||||||||||||||    
T  33151365 agttagggacaatattaatcttcctaactctcatccttctattttgggtcattgtta 33151421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 456 - 605
Target Start/End: Complemental strand, 42865208 - 42865045
Alignment:
Q  456 ataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca- 548  Q
    |||||| ||||||||||||||||| | |||||||||||||||||| |  ||||||||||||      ||||||||||||||||||| ||||||||||||     
T  42865208 ataatccggaaaccccctaaacaccccttttcaaggtaaaacagtccggattatataatccgaactgtatcagcacaaattctaaatatgtttgtaacat 42865109  T
Q  549 -------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgt 605  Q
           ||||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||    
T  42865108 ggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgt 42865045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 454
Target Start/End: Complemental strand, 42877244 - 42877153
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggatta 454  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| | ||| |  ||||||||||||||||||||| ||||||||||||||    
T  42877244 taaagggtgaaaaaatgagtaacgtgtttttccggattttgtaatcgggaaaataaaaaaaatagggcgcgttacataatgtttccggatta 42877153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 397 - 607
Target Start/End: Complemental strand, 31985685 - 31985458
Alignment:
Q  397 gattttgtaatccgaaaacttcaaaaaa--tagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaa-ggta 493  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||| ||| ||||||| |||||  | | ||||| |||||||  |||||||| ||      
T  31985685 gattttgtaatccgaaaacctcaaaaaaaatagggcgcgttacatgattttttcggattacataattcgaacaccccttaaacaccatttttcaaggggg 31985586  T
Q  494 aaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaact 579  Q
    |||||||||  |||||||||| |      ||||| |||||||| ||||||| ||| |||||        ||||||| | ||||||||||||||  |||||    
T  31985585 aaacagttcggattatataattcgaactgtatcaacacaaattttaaacatatttttaacatgaatagtcattttatggacaatattaatctttctaact 31985486  T
Q  580 ctcatcattatgttttgggtcattgtta 607  Q
    ||||||||| ||||||||||||||||||    
T  31985485 ctcatcattctgttttgggtcattgtta 31985458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 396 - 471
Target Start/End: Complemental strand, 33574200 - 33574125
Alignment:
Q  396 ggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 471  Q
    ||||||||||||||| |||||| ||||||||||| |||||||||||||||| ||||||| |||||| | |||||||    
T  33574200 ggattttgtaatccggaaactttaaaaaatagggtgcgttacatgatgttttcggattacataatccgaaaacccc 33574125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 389 - 479
Target Start/End: Complemental strand, 7115444 - 7115354
Alignment:
Q  389 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacac 479  Q
    ||||| |||||| | ||||||||| || ||||||||||||| ||||||| |||| ||| || ||||||||||||| |||||||||||||||    
T  7115444 ttttttcggattatataatccgaagacctcaaaaaatagggtgcgttacttgattttttcgaattatataatctgaaaaccccctaaacac 7115354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 542
Target Start/End: Original strand, 6467665 - 6467843
Alignment:
Q  373 aaaaatgagtaacgggtttttccggattttgtaa--tccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccc 470  Q
    |||||||||| |||| |||||||| ||| |||||  |||  |||  ||||||||||||| | |||||||||| | | ||||||| |||||| | | ||||    
T  6467665 aaaaatgagttacggatttttccgaattatgtaaaatccagaaatctcaaaaaatagggtgtgttacatgatttgttcggattacataatccgaacaccc 6467764  T
Q  471 cctaaacactctttttcaa-ggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgttt 542  Q
    ||||||||| ||||||||| || ||||||||||  ||||||||||||      |||||||| ||||| |||||||||||    
T  6467765 cctaaacaccctttttcaagggaaaaacagttcggattatataatccgaactgtatcagcataaattttaaacatgttt 6467843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 516 - 613
Target Start/End: Original strand, 19818499 - 19818604
Alignment:
Q  516 ctatcagcacaaattctaaacatgtttgtaacac--------attttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    |||||||||||||| ||||||||| ||||||||         |||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  19818499 ctatcagcacaaatcctaaacatgcttgtaacatggatagttattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgtta 19818598  T
Q  608 cttgtt 613  Q
    | ||||    
T  19818599 cctgtt 19818604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 549 - 613
Target Start/End: Original strand, 43737242 - 43737306
Alignment:
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||| ||||||||||||||| ||||||| ||| |||||||||||||||||||||| ||||    
T  43737242 cattttagggacaatattaatcttcctaactctgatccttatgttttgggtcattgttacatgtt 43737306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 478
Target Start/End: Complemental strand, 37218272 - 37218189
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaaca 478  Q
    |||||||| ||||||||||||||||||||||||||| | || | |||| ||| ||||||||||||| || | ||||||| ||||    
T  37218272 cggattttataatccgaaaacttcaaaaaatagggcacattccttgattttttcggattatataatatgaacaccccctgaaca 37218189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 517 - 607
Target Start/End: Original strand, 1518827 - 1518925
Alignment:
Q  517 tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    |||||||||||||| |||||||||||||||||        ||||||| | ||||||||||||||| ||||||||||| || | |||||||| |||||||    
T  1518827 tatcagcacaaattataaacatgtttgtaacatcgataatcattttatggacaatattaatcttcttaactctcatccttctattttgggttattgtta 1518925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 613
Target Start/End: Complemental strand, 36946458 - 36946227
Alignment:
Q  396 ggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaa 495  Q
    ||||||| |||||||||||| ||||||||||| | ||||||| | || |||  |||||||| ||||   | |||   |||||||  |||||||||| |||    
T  36946458 ggattttataatccgaaaacctcaaaaaatagagtgcgttacttaatttttttggattataaaatccaaacaccatttaaacaccttttttcaagggaaa 36946359  T
Q  496 a-cagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactc 580  Q
    | || |||  ||||||||| ||      |||||||||||||||| || ||||||||||||        ||||||| || ||||||||| |||| ||||||    
T  36946358 aacaattcggattatataacccgaactgtatcagcacaaattctgaatatgtttgtaacatgaataatcattttaaga-caatattaagcttcctaactc 36946260  T
Q  581 tcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||| || |||||||||||||||||| |||||    
T  36946259 tcatccttttgttttgggtcattgttagttgtt 36946227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 608
Target Start/End: Complemental strand, 24690333 - 24690274
Alignment:
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    ||||||| | ||||||||||||| | ||||||||||| || |||||||||||||||||||    
T  24690333 cattttatggacaatattaatctacctaactctcatccttttgttttgggtcattgttac 24690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 562 - 613
Target Start/End: Complemental strand, 37398877 - 37398826
Alignment:
Q  562 atattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||| |||||    
T  37398877 atattaatcttcctaactctcatcattctgttttaggtcattgttagttgtt 37398826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 26555214 - 26555161
Alignment:
Q  389 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 442  Q
    ||||| |||||||||||||||||| |   |||||||||||||||||||||||||    
T  26555214 ttttttcggattttgtaatccgaatatcacaaaaaatagggcgcgttacatgat 26555161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 419
Target Start/End: Complemental strand, 28349283 - 28349227
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttca 419  Q
    |||| ||||||||||||||| |||  |||||| | ||||||||||||||||||||||    
T  28349283 taaatggtgaaaaaatgagttacgaatttttctgaattttgtaatccgaaaacttca 28349227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 455
Target Start/End: Original strand, 48775574 - 48775634
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattat 455  Q
    |||||||| |||| ||||||| ||||||||||||| || |||| |||||||| ||||||||    
T  48775574 cggattttataattcgaaaacctcaaaaaatagggtgcattacttgatgttttcggattat 48775634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 550 - 613
Target Start/End: Complemental strand, 33574041 - 33573978
Alignment:
Q  550 attttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||||| ||||||||||||||  ||||||| ||| || ||||||| ||||||||||| ||||    
T  33574041 attttagggacaatattaatctttctaactcttatccttttgttttgagtcattgttacatgtt 33573978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 561 - 607
Target Start/End: Original strand, 5278436 - 5278482
Alignment:
Q  561 aatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    ||||||||||||| ||||||| ||| || ||||||||||||||||||    
T  5278436 aatattaatcttcctaactcttatccttctgttttgggtcattgtta 5278482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 423
Target Start/End: Complemental strand, 28349226 - 28349192
Alignment:
Q  389 tttttccggattttgtaatccgaaaacttcaaaaa 423  Q
    ||||||||||||||||||| |||||||||||||||    
T  28349226 tttttccggattttgtaattcgaaaacttcaaaaa 28349192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 28346116 - 28346173
Alignment:
Q  372 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaataggg 429  Q
    ||||||||||| |||| | |||||| ||||||||||||  |||||||||||| |||||    
T  28346116 aaaaaatgagttacggatgtttccgaattttgtaatccagaaacttcaaaaagtaggg 28346173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 559 - 595
Target Start/End: Complemental strand, 8214279 - 8214243
Alignment:
Q  559 acaatattaatcttcgtaactctcatcattatgtttt 595  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  8214279 acaatattaatcttcctaactctcatcattgtgtttt 8214243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 5e-76; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 363 - 608
Target Start/End: Complemental strand, 44465922 - 44465662
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat-gtttccggattatataatc 461  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  |||||| ||| ||    
T  44465922 taaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatagtttatggattacatactc 44465823  T
Q  462 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca------- 548  Q
     ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||           
T  44465822 cggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaaatgtatcagcacaaattctaaacatgtttgtaacatggttag 44465723  T
Q  549 -cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
     ||||||||| ||||||||||||||| ||||||||||| || |||||||||||||||||||    
T  44465722 tcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttac 44465662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 363 - 613
Target Start/End: Original strand, 39447122 - 39447386
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  39447122 taaagggtgaaaaaatgagtaacggatttttccggattttgtaatccgaaaacttcaaaaaatagggcgcattacatgatgttttcggattacataatct 39447221  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||||| ||||||| |||||||||||||||| |||||  |||||||||| |      ||||||||||||||||||||||||||||||||            
T  39447222 ggaaaccccataaacaccctttttcaaggtaaaatagttcggattatataattcaaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 39447321  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||||   ||||||||||||||| ||||||||||| || | ||||||||||||||||| ||||    
T  39447322 cattttaaagacaatattaatcttcctaactctcatccttctattttgggtcattgttacatgtt 39447386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 45153985 - 45153721
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  45153985 taaagggtgaaaaaatgagtaacgggtttttctgaattttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 45153886  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataat------cctatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||||||||||||| ||||||||||||||||||||| | ||||||||||        ||||||||||| || |||||||||||||||||            
T  45153885 ggaaaccccctaaacaccctttttcaaggtaaaacagtttagattatataatttgaactgtatcagcacaagttataaacatgtttgtaacatggatagt 45153786  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  45153785 cattttagggacaatattaatcttcttaactctcatccttctgttttgggtcattgttacctgtt 45153721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 364 - 613
Target Start/End: Complemental strand, 41510622 - 41510359
Alignment:
Q  364 aaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||| |||||||||| ||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  41510622 aaagggtgaaaaaaatgagtaacggatttttccagatttcgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataatct 41510523  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca-------c 549  Q
    ||||||||||||||||| | |||||||||||||||||| |  |||||||||||       ||||||||||| ||||||||||||||||||||       |    
T  41510522 ggaaaccccctaaacaccccttttcaaggtaaaacagtccggattatataatctgaactgtatcagcacaatttctaaacatgtttgtaacatgatagtc 41510423  T
Q  550 attttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  41510422 attttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacttgtt 41510359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 32188064 - 32187799
Alignment:
Q  363 taaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 461  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  32188064 taaagggtgaaaaaaatgagtaacgggtttttctggattttgtaatctggaaacttcaaaaaatagggcgagttacatgatgtttccggattacataatc 32187965  T
Q  462 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca------- 548  Q
     |||||||||| ||||||  |||||||||||||||||||||  ||||||||||||      |||||||||||||| |||| ||||||||||||           
T  32187964 cggaaacccccgaaacaccatttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattttaaatatgtttgtaacatggatag 32187865  T
Q  549 -cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     ||||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  32187864 tcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgtt 32187799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 363 - 607
Target Start/End: Complemental strand, 33452637 - 33452379
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||| ||||||||||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| | ||||||     
T  33452637 taaagggtggaaaaatgagtaacggatttttctggattttgtaattcggaaacttcaaaaaatagggcgcgttacatgatgtttccggatcacataatcc 33452538  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    |||||| |||||||||| ||||||||||||||||||||||  ||||||||||||      ||| ||||||||||||||||||||||||||||            
T  33452537 ggaaactccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtattagcacaaattctaaacatgtttgtaacatggataat 33452438  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||||||||||| ||||||    
T  33452437 cattttagggacaatattaatcttcctaactctcattcttttgttttgggtctttgtta 33452379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 15995308 - 15995043
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaa-tagggcgcgttacatgatgtttccggattatataatc 461  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  15995308 taaagggtgaaaaaattagtaacgggtttttccggattttgtaatcgggaaacttcaaaaaaatagggcgcgttgcatgatgtttccggattacataatc 15995209  T
Q  462 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca------- 548  Q
     | ||||||||||||||| |||||||||| |||||||||||  |||||||||| |      |||||||| |||||||||||||||||||||||           
T  15995208 cgaaaaccccctaaacaccctttttcaagctaaaacagttcggattatataattcgaactgtatcagcaaaaattctaaacatgtttgtaacatggatag 15995109  T
Q  549 -cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     ||||||| | ||||||||||||||  |||||||||||||| ||||||||||||||||||| ||||    
T  15995108 tcattttatggacaatattaatctttctaactctcatcattctgttttgggtcattgttacatgtt 15995043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 17474993 - 17474729
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||     
T  17474993 taaaaggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaactttaaaaaatagggcgcgttacatgatgtttccggattacataatcc 17474894  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    |||||||||||||||||  ||||||||||||||||||||   ||||||||||||      |||||||||||||| |||||||||||||||||            
T  17474893 ggaaaccccctaaacacaatttttcaaggtaaaacagtttggattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagt 17474794  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||  ||||||||||||||| |||||||||| ||| |||| || | ||||||||| ||||    
T  17474793 cattttagagacaatattaatcttcctaactctcataattctgttatgcggcattgttacctgtt 17474729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 395 - 607
Target Start/End: Complemental strand, 41855061 - 41854840
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaa 494  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| || ||| ||||||||||||||||| ||||||||||||||    
T  41855061 cggattttgtaatccggaaacttcaaaaaatagggtgtgttacatgatgtttccggattacatgatccggaaaccccctaaacaccctttttcaaggtaa 41854962  T
Q  495 aacagttcatattatataat------cctatcagcacaaattctaaacatgtttgta---acacattttaggaacaatattaatcttcgtaactctcatc 585  Q
    ||||||||  ||||||||||        |||||||||||||||||||||||||||||   |  ||||| ||| ||||||||||||||| |||||||||||    
T  41854961 aacagttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgtaaatagtcatttcagggacaatattaatcttcctaactctcatc 41854862  T
Q  586 attatgttttgggtcattgtta 607  Q
     || ||||||| ||||||||||    
T  41854861 cttctgttttgagtcattgtta 41854840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 363 - 514
Target Start/End: Complemental strand, 25217984 - 25217834
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||     
T  25217984 taaagggtgaaaaaatgagtaacggattttttcggattttgtaatccggaaacttcaaaaaatagggtgcgttacatgatgtttccggattacataatcc 25217885  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataat 514  Q
    ||||| ||||||||||| | ||||||||||||||||||||  ||||||||||    
T  25217884 ggaaa-cccctaaacaccccttttcaaggtaaaacagttcggattatataat 25217834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 395 - 613
Target Start/End: Original strand, 42894369 - 42894601
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaa 494  Q
    |||||| | ||||||| |||||| |||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||  |||||||||||||    
T  42894369 cggattatataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaa 42894468  T
Q  495 aacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactc 580  Q
    |||||| |  |||||||| |||      |||||||||||||||||||||||||| |||||        ||||||||| ||||||||||||||| ||||||    
T  42894469 aacagtccggattatatattccgaactgtatcagcacaaattctaaacatgtttctaacatggataatcattttagggacaatattaatcttcctaactc 42894568  T
Q  581 tcatcattatgttttgggtcattgttacttgtt 613  Q
    || || || ||||||||||||||||||| ||||    
T  42894569 tcttccttctgttttgggtcattgttacatgtt 42894601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 395 - 608
Target Start/End: Original strand, 36874977 - 36875204
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaa 494  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||| || |||||  |||||||||||||    
T  36874977 cggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccctctgaacaccatttttcaaggtaa 36875076  T
Q  495 aacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactc 580  Q
    |||||| |  ||||||||||||      ||| |||| |||||||||||| ||||||||||        ||||||||| | ||||||||||||| ||||||    
T  36875077 aacagtccggattatataatccaaactgtattagcataaattctaaacaagtttgtaacatggatagtcattttagggataatattaatcttcctaactc 36875176  T
Q  581 tcatcattatgttttgggtcattgttac 608  Q
    ||||| || |||||||||||||||||||    
T  36875177 tcatccttctgttttgggtcattgttac 36875204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 36949136 - 36948875
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||    
T  36949136 agggtgaaaaatggagttacggatttttccggattttgtaatctgcaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatccgga 36949037  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    ||||||||||||||  ||| | ||||||||| ||||   ||||||||||||      ||||||||||||| |||||||| ||| |||||         ||    
T  36949036 aaccccctaaacaccatttgttaaggtaaaatagtttggattatataatccaaactgtatcagcacaaatcctaaacatatttataacatgtatagctat 36948937  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||| ||||||||||||||| ||||||| ||| || |||||||||| |||||||| ||||    
T  36948936 tttagggacaatattaatcttcctaactcttatccttttgttttgggtaattgttacctgtt 36948875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 379 - 498
Target Start/End: Complemental strand, 4268416 - 4268297
Alignment:
Q  379 gagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaaca 478  Q
    |||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  4268416 gagtaatgggttttttcggattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaaca 4268317  T
Q  479 ctctttttcaaggtaaaaca 498  Q
    | ||||||||||||||||||    
T  4268316 ccctttttcaaggtaaaaca 4268297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 368 - 613
Target Start/End: Original strand, 34517066 - 34517325
Alignment:
Q  368 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaa 467  Q
    ||||||||||||||| |||  ||||| ||||||||||||||  ||||  |||||||||||||||||||||||||| ||| ||||||| ||||||   | |    
T  34517066 ggtgaaaaaatgagttacgaattttttcggattttgtaatcgaaaaatctcaaaaaatagggcgcgttacatgat-ttttcggattacataatccaaata 34517164  T
Q  468 ccccctaaacactctttttcaa-ggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------catt 552  Q
    |||| |||||||  |||||||| || |||||||||   ||||||||||||      ||||||||||||||||||||||||  ||||||        ||||    
T  34517165 ccccttaaacaccatttttcaagggaaaaacagtttggattatataatccgaactgtatcagcacaaattctaaacatgtcggtaacatggatagtcatt 34517264  T
Q  553 ttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||| |||||||||||||| || ||||| ||||| || ||||||||||||||||||| ||||    
T  34517265 ttatgaacaatattaatcatcataactttcatccttttgttttgggtcattgttacctgtt 34517325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 368 - 613
Target Start/End: Original strand, 5507381 - 5507643
Alignment:
Q  368 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatga--tgtttccggattatataatctgga 465  Q
    ||||||||||||||| || | ||||| || |||||||||||| |||||||||||||||| | ||||||||||||  | ||| |||||||||||||| | |    
T  5507381 ggtgaaaaaatgagttacagattttttcgaattttgtaatccaaaaacttcaaaaaataagacgcgttacatgattttttttcggattatataatccgaa 5507480  T
Q  466 aaccccctaaacactctttttcaagg-taaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------ca 550  Q
     |||||||||||||  ||| | ||||  |||| |||||  ||||||||||||      ||||||||||||||||||||||||||||||||        ||    
T  5507481 caccccctaaacaccttttcttaaggaaaaaatagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtca 5507580  T
Q  551 ttttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||  ||||||||||||||||  |||||||||  || ||||||||||||||| ||| ||||    
T  5507581 ttttataaacaatattaatcttcacaactctcattcttctgttttgggtcattgctacctgtt 5507643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 389 - 613
Target Start/End: Complemental strand, 41203354 - 41203116
Alignment:
Q  389 tttttccggattttgtaatccgaaaacttc-aaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttc 487  Q
    |||||||||||||||||||||| ||||| | ||||||||||| ||  ||||| || |||| |||||| |||||| | | ||||| ||||||| ||||||     
T  41203354 tttttccggattttgtaatccggaaactacaaaaaaatagggtgc--tacataatttttctggattacataatccgaacaccccgtaaacacccttttta 41203257  T
Q  488 aag-gtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatctt 572  Q
    ||| | ||||||||||| ||||||||| ||      |||||||||||||| |||||||||||||||||        ||||||| | ||||||||||||||    
T  41203256 aagagaaaaacagttcagattatataaaccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttatggacaatattaatctt 41203157  T
Q  573 cgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    | ||||| ||||| || ||||||||||||||||||| ||||    
T  41203156 cctaactttcatccttctgttttgggtcattgttacctgtt 41203116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 363 - 461
Target Start/End: Complemental strand, 9847619 - 9847521
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 461  Q
    ||||| |||||||||||||| || | ||||||| ||||||||||||||||||  ||||||||| |||||||||||||||| ||| || |||| ||||||    
T  9847619 taaagagtgaaaaaatgagttactgatttttccagattttgtaatccgaaaatctcaaaaaattgggcgcgttacatgattttttcgtattacataatc 9847521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 395 - 479
Target Start/End: Original strand, 33366920 - 33367003
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacac 479  Q
    ||||||||||||||||||||||||||||| || | ||||||||||||| ||||||||||| |||||| | ||||||||| |||||    
T  33366920 cggattttgtaatccgaaaacttcaaaaa-taagacgcgttacatgatatttccggattacataatccgaaaacccccttaacac 33367003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 449 - 606
Target Start/End: Original strand, 8388696 - 8388868
Alignment:
Q  449 ggattatataatctggaaaccccctaaacactctttttcaaggtaaaa-cagttcatattatataatcc------tatcagcacaaattctaaacatgtt 541  Q
    |||||||||||||   | ||||| |||||||||||||| |||| |||| ||||||| |||||||| |||      ||||||||||||||||||| |||||    
T  8388696 ggattatataatcctaacaccccttaaacactcttttttaaggaaaaaacagttcagattatatagtccgaaatgtatcagcacaaattctaaagatgtt 8388795  T
Q  542 tgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtt 606  Q
    |||||||        ||| ||| | ||||||||||||||| ||||||||||| ||  ||||||||||||||||    
T  8388796 tgtaacatggattgccatcttatggacaatattaatcttcctaactctcatccttcagttttgggtcattgtt 8388868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 461
Target Start/End: Complemental strand, 38308954 - 38308890
Alignment:
Q  397 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 461  Q
    |||| |||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||||    
T  38308954 gattatgtaatccgaaaacttcaaaaaatagggcgcgctatttgatttttccggattatataatc 38308890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 607
Target Start/End: Complemental strand, 16750422 - 16750365
Alignment:
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  16750422 cattttaggaacaatattaatcttc-taactctcatccttctgttttgggtcattgtta 16750365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 396 - 513
Target Start/End: Complemental strand, 38066834 - 38066717
Alignment:
Q  396 ggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaac-cccctaaacactctttttcaa-ggta 493  Q
    ||||||| |||||||||||||||||||||||||| | |||| ||||| ||| ||||||| |||| |   |||| ||| ||||||| | ||||||| || |    
T  38066834 ggattttataatccgaaaacttcaaaaaatagggtgtgttatatgattttttcggattacataacc--caaacacccataaacaccccttttcaagggaa 38066737  T
Q  494 aaacagttcatattatataa 513  Q
    ||||||||||||||||||||    
T  38066736 aaacagttcatattatataa 38066717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 396 - 607
Target Start/End: Complemental strand, 19110176 - 19109951
Alignment:
Q  396 ggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaa-ggtaa 494  Q
    ||||||| |||||| ||||  | ||||||||||||| ||| | |||| ||| | ||||||| ||||||   ||||||||||||| ||||||||| || ||    
T  19110176 ggattttataatccaaaaatctgaaaaaatagggcgtgttccttgattttttctgattatagaatctgatcaccccctaaacaccctttttcaagggaaa 19110077  T
Q  495 aacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactc 580  Q
    ||  ||||  ||||||||||||      |||||||||||||| |||| || |||||||||        ||||||| | | ||||||||||||| ||||||    
T  19110076 aattgttc-gattatataatccaaactatatcagcacaaattttaaatatctttgtaacatggatcgtcattttaaggataatattaatcttcctaactc 19109978  T
Q  581 tcatcattatgttttgggtcattgtta 607  Q
    ||||| || | ||||||||||||||||    
T  19109977 tcatccttttattttgggtcattgtta 19109951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 549 - 607
Target Start/End: Original strand, 30763809 - 30763867
Alignment:
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    ||||||| | ||||||||||||||| ||||||||||| || |||||| |||||||||||    
T  30763809 cattttatggacaatattaatcttcctaactctcatctttctgtttttggtcattgtta 30763867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 461
Target Start/End: Original strand, 25715323 - 25715423
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttc--cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataat 460  Q
    |||||||||||||||||||| ||   |||||   |||| |||||||||| ||||  |||||| |||||||||||||| |||| ||| ||||||| |||||    
T  25715323 taaagggtgaaaaaatgagttacaaattttttttcggactttgtaatccaaaaatctcaaaagatagggcgcgttacctgattttttcggattacataat 25715422  T
Q  461 c 461  Q
    |    
T  25715423 c 25715423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 562 - 607
Target Start/End: Original strand, 42478916 - 42478961
Alignment:
Q  562 atattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||||    
T  42478916 atattaatcttcctaactctcatccttatgttttaggtcattgtta 42478961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 34817092 - 34817144
Alignment:
Q  404 taatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattata 456  Q
    |||| ||||||| |||||||||||| || ||||| |||||||| |||||||||    
T  34817092 taattcgaaaacctcaaaaaataggacgtgttacttgatgttttcggattata 34817144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 8e-72; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 17264373 - 17264634
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  17264373 agggtgaaaaaatgagtaacggatttttccggattttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgga 17264472  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    |||||||||||||| |||||||||||||||| |||||  |||||||||||       ||||||||||||||||||||||||||| ||||        |||    
T  17264473 aaccccctaaacaccctttttcaaggtaaaatagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgcaacatggttagtcat 17264572  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||| |||||||| |||||| ||||||||||| || ||||||| ||||||||||| ||||    
T  17264573 tttagggacaatatttatcttcctaactctcatccttctgttttgcgtcattgttacctgtt 17264634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 14587759 - 14587495
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||     
T  14587759 taaagggtgaaaaaatgagtaagggatttttccggattttgtaatccgaaaactttaaaaaatagggcgcgttacatgatgtttcctgattacataatcc 14587660  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
      |||||||||||||||  |||||||||||||||||||||  |||||||||||       |||| |||||||||||||||||||||||||||            
T  14587659 ataaaccccctaaacaccatttttcaaggtaaaacagttcggattatataatcataactgtatcggcacaaattctaaacatgtttgtaacatggatagt 14587560  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||| | ||||||||||||||| ||||||| ||| |||||||||||||||||||||| ||||    
T  14587559 cattttacggacaatattaatcttcctaactctaatccttatgttttgggtcattgttacatgtt 14587495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 3717482 - 3717217
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3717482 taaagggtgaaaaaatgagtaatgggcttttccgaattttgtaatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattatataatct 3717383  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||| |||||||||  |||||||||||||||||||||  ||||||||||||      ||||| |||||||||||||||||| |||||||            
T  3717382 ggaaacctcctaaacacaatttttcaaggtaaaacagttcggattatataatccgaactgtatcatcacaaattctaaacatgtctgtaacatggatagt 3717283  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatg-ttttgggtcattgttacttgtt 613  Q
    ||||||||| ||||||||||| ||  ||||||||||| || || ||||||||||||||||| ||||    
T  3717282 cattttagggacaatattaatttttctaactctcatccttctgtttttgggtcattgttacatgtt 3717217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 4508498 - 4508237
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||||||||||||| |||||||||||||| ||||||  ||| |||||||| ||||||| ||||||||||||||||||||||||||||| |||    
T  4508498 agggtgaaaaaatgagtaacggatttttccggattttataatccagaaatttcaaaaattagggcgtgttacatgatgtttccggattatataatccgga 4508399  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    || ||||||||||   |||||||||||||||||||||  |||||||||||       |||||||||||||||||||||||||||||| |        |||    
T  4508398 aatcccctaaacaacttttttcaaggtaaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcat 4508299  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||| ||||||||||||||| ||||| ||||| || ||||||||||||||||||| ||||    
T  4508298 tttagggacaatattaatcttcctaactttcatccttctgttttgggtcattgttacatgtt 4508237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 23406759 - 23407021
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| ||| ||||||||| |||| |||||||| |||||||||||||||||||||||||  ||||||||| |||||| |||||| |||    
T  23406759 agggtgaaaaatggagttacgagtttttccgaatttcgtaatccggaaacttcaaaaaatagggcgcgttagttgatgtttctggattacataatccgga 23406858  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    ||||||||||||||  |||||||||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||        |||    
T  23406859 aaccccctaaacaccatttttcaaggtaaaacagttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcat 23406958  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatg-ttttgggtcattgttacttgtt 613  Q
    |||||| ||||||||||||||| ||||||||||| ||  | |||||||||||| |||||||||    
T  23406959 tttagggacaatattaatcttcctaactctcatccttccgtttttgggtcattattacttgtt 23407021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 370 - 548
Target Start/End: Original strand, 32035080 - 32035259
Alignment:
Q  370 tgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacc 469  Q
    |||||||  |||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  32035080 tgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaacc 32035179  T
Q  470 ccctaaacactctttttcaaggtaaaacagttcatattatataatc-ctatcagcacaaattctaaacatgtttgtaaca 548  Q
    |||||||||| |||||| ||||||||| |||||  |||||||||||  ||||||||||||| |||||||| |||||||||    
T  32035180 ccctaaacacccttttttaaggtaaaatagttcggattatataatctgtatcagcacaaatcctaaacatatttgtaaca 32035259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 364 - 613
Target Start/End: Complemental strand, 1945727 - 1945465
Alignment:
Q  364 aaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctg 463  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |  |||||||||||||||||||     
T  1945727 aaagggtgaaaaaatgagttacggatttttccggattttgtaatccgaaaacttcaaaaactagggtgcgttacataaattttccggattatataatct- 1945629  T
Q  464 gaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------c 549  Q
    |||  ||||||||| |  |||||||||  |||||| |||| ||||||||||||      |||| |||||||||||||||||||||||||||        |    
T  1945628 gaacacccctaaaccccatttttcaagtgaaaacaattcagattatataatccgaactgtatcggcacaaattctaaacatgtttgtaacatggatagtc 1945529  T
Q  550 attttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||||| | ||||||||||||| ||||||||||| || ||||||||| ||||||||| ||||    
T  1945528 attttagggataatattaatcttcctaactctcatccttctgttttgggacattgttacctgtt 1945465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 363 - 498
Target Start/End: Original strand, 7412788 - 7412922
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||     
T  7412788 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttccggattacataatc- 7412886  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaaca 498  Q
     |||| ||||||||||| ||||||||||||||||||    
T  7412887 cgaaaacccctaaacaccctttttcaaggtaaaaca 7412922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 366 - 608
Target Start/End: Original strand, 5699521 - 5699785
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||||||||| || ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||| |||    
T  5699521 agggtgaaaaatggagttacgggttttttcgaattttgtaatccggaaacttgaaaaaatagggcgcgttacatgatgtttccggattacataatccgga 5699620  T
Q  466 aaccccctaaacactctttttcaaggtaaaacag-------ttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca---- 548  Q
    |||||||||||||| |||||||||||||| ||||       |||| ||||||||||||      ||| | ||||||||||||| ||||||||||||        
T  5699621 aaccccctaaacaccctttttcaaggtaatacagttcagatttcagattatataatccgaactgtattaacacaaattctaaatatgtttgtaacatgga 5699720  T
Q  549 ----cattttaggaacaatattaatcttcgtaactctcatcattatg-ttttgggtcattgttac 608  Q
        ||||||| | ||||||||||||||| ||||||||||| || || |||||||||||||||||    
T  5699721 tagtcattttaaggacaatattaatcttcataactctcatccttctgtttttgggtcattgttac 5699785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 372 - 613
Target Start/End: Complemental strand, 24604552 - 24604296
Alignment:
Q  372 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 471  Q
    ||||||||||| | || |||||||| |||||||||||| |||||||||||||||||||||  ||||||||| | | ||||||| |||||| | | |||||    
T  24604552 aaaaaatgagttaaggatttttccgaattttgtaatccaaaaacttcaaaaaatagggcgtcttacatgatttcttcggattacataatccgaacacccc 24604453  T
Q  472 ctaaacactctttttcaa-ggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cattttag 556  Q
     |||||||  |||||||| || |||||||||||||||||||||||      ||||||||||||||||||||||| |||||||||        ||||||||    
T  24604452 ttaaacaccatttttcaagggaaaaacagttcatattatataatctgaactctatcagcacaaattctaaacatatttgtaacaaagatagtcattttag 24604353  T
Q  557 gaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
      ||||||||||||||| ||||| ||||| || ||||||| ||||||||||| ||||    
T  24604352 agacaatattaatcttcctaactttcatccttctgttttgagtcattgttacctgtt 24604296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 448 - 608
Target Start/End: Original strand, 2539496 - 2539670
Alignment:
Q  448 cggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtt 541  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||      ||||| ||||||||||| ||||||||    
T  2539496 cggattacataatctggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactctatccgcacaaattctgaacatgtt 2539595  T
Q  542 tgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    |||||||        ||||||||| ||||||||||||||| ||||||||||| || |||||||||||||||||||    
T  2539596 tgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttac 2539670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 2813422 - 2813159
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggat--tttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctg 463  Q
    |||||||||||  |||| || | |||||||||||  ||||||||||| ||||||||||||||| || | |||||||||||||||||||||| |||||| |    
T  2813422 agggtgaaaaatggagttacagatttttccggatattttgtaatccggaaacttcaaaaaataaggtgtgttacatgatgtttccggattacataatccg 2813323  T
Q  464 gaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------c 549  Q
    |||||||||||||||| ||||||||||||||||| ||||  | ||||||||||      ||||| |||||||||||||||| ||| |||||        |    
T  2813322 gaaaccccctaaacaccctttttcaaggtaaaacggttcgga-tatataatccgaactgtatcaccacaaattctaaacatatttttaacatgaatagtc 2813224  T
Q  550 attttaggaacaatattaatcttcgtaactctcatcattatg-ttttgggtcattgttacttgtt 613  Q
    |||||| | | ||||||||||||| ||||||||||| ||  | ||||||||||||||||| ||||    
T  2813223 attttatggataatattaatcttcctaactctcatccttccgtttttgggtcattgttacctgtt 2813159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 366 - 502
Target Start/End: Complemental strand, 33413542 - 33413407
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||  |||||| | ||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  33413542 agggtgaaaaatggagttacgaatttttctgaattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccagattacataatctgga 33413444  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttc 502  Q
    |||||||||||||  ||||||||||||||||||||||    
T  33413443 aaccccctaaacaacctttttcaaggtaaaacagttc 33413407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 420 - 613
Target Start/End: Original strand, 5638879 - 5639086
Alignment:
Q  420 aaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc--- 516  Q
    ||||||||||||||||||||||||||||||||||| ||||| || |||  |||||||||| ||||||||||||||||||||||  ||||||||||||       
T  5638879 aaaaatagggcgcgttacatgatgtttccggattacataatttgaaaaatccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaa 5638978  T
Q  517 ---tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgt 605  Q
       |||||||||| ||  ||||||||| |||||||        |||| |||| ||||||||||||||| ||||||| ||| || ||||||| ||||||||    
T  5638979 ctgtatcagcacatatcataaacatgtctgtaacatatatagccattctagggacaatattaatcttcttaactcttatccttttgttttgagtcattgt 5639078  T
Q  606 tacttgtt 613  Q
    ||| ||||    
T  5639079 tacctgtt 5639086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 31096398 - 31096251
Alignment:
Q  87 ctttggttttctcttaagatatgtagtataccgcaacaagtcccacatcgagtatacgttaaaaca-gcactgaagttt---ttataaaataagagtgtg 182  Q
    |||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||| | ||||| ||||||   |||||||||||||||||     
T  31096398 ctttggttttctcttaaggtatgtaatataccacaacaagtcccacatcgagtatacgttaaaataggcact-aagttttacttataaaataagagtgta 31096300  T
Q  183 tatcacttagtaactcatagttgggga-ccaatctattacttttgttgt 230  Q
     |||||||| |||| |||||||||||| |||||||| ||||||||||||    
T  31096299 catcacttattaacacatagttggggacccaatctaatacttttgttgt 31096251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 389 - 608
Target Start/End: Original strand, 9905104 - 9905334
Alignment:
Q  389 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttca 488  Q
    ||||||||||||||||||| || ||| |||||||||||||||||| ||| |||| ||||||||||| |||||| | | ||||||||||| |  |  ||||    
T  9905104 tttttccggattttgtaattcggaaatttcaaaaaatagggcgcgctacgtgatttttccggattacataatccgaacaccccctaaacgccatcattca 9905203  T
Q  489 a-ggtaaaacagttcatattatataatcc-tatcagcacaaattctaaacatgtttgtaaca--------catttta-ggaacaatattaatcttcgtaa 577  Q
    | || |||| ||||   ||||||||| || |||||||||||||| |||||||||||||||||        ||||||| |||||||||||||| ||| | |    
T  9905204 agggaaaaatagtttggattatataacccatatcagcacaaattttaaacatgtttgtaacatggataatcattttagggaacaatattaattttcctta 9905303  T
Q  578 ctctcatcattatgttttgggtcattgttac 608  Q
    |||| ||| || ||||||| |||||||||||    
T  9905304 ctcttatccttctgttttgagtcattgttac 9905334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 31080594 - 31080735
Alignment:
Q  68 catgagtttagacttgtaactttggttttctcttaagatatgtagtataccgcaacaagtcccacatcgagtatacgttaaaaca-gcactgaagtttt- 165  Q
    |||||||||||||||  ||||||||||||||||| | | |||||||||||| ||||||||||||||| ||||||  ||||||||| |||| |||| |||     
T  31080594 catgagtttagacttaaaactttggttttctcttcaaacatgtagtataccacaacaagtcccacatagagtatgtgttaaaacatgcac-gaaggttta 31080692  T
Q  166 --tataaaataagagtgtgtatcacttagtaactcatagttgg 206  Q
      |||||||||||||||| ||| |||||  |||||||||||||    
T  31080693 cctataaaataagagtgtatataacttatcaactcatagttgg 31080735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 521 - 613
Target Start/End: Complemental strand, 13801062 - 13800962
Alignment:
Q  521 agcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgt 612  Q
    |||| |||||||||||||||||||||||        ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  13801062 agcataaattctaaacatgtttgtaacatagattatcattttatgaacaatattaatcttcctaactctcatcattatgttttgggtcattgttagttgt 13800963  T
Q  613 t 613  Q
    |    
T  13800962 t 13800962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 37 - 190
Target Start/End: Original strand, 31035435 - 31035593
Alignment:
Q  37 ttggagtttcttcttctactgtaaccttgtgc--atgagtttagacttgtaactttggttttctcttaagatatgtagtataccgcaacaagtcccacat 134  Q
    |||||||||||||||||  ||||||||| |||  ||  ||||| ||||| ||||| ||||||||||| | | |||||||||||| |||||||| ||||||    
T  31035435 ttggagtttcttcttctcttgtaaccttctgcgcatttgtttaaacttgaaacttaggttttctcttcaaacatgtagtataccacaacaagttccacat 31035534  T
Q  135 cgagtatacgttaaaacagcactgaagtttt---tataaaataagagtgtgtatcactt 190  Q
    |||||||  ||||||||||   ||||| |||   ||||||| |||||||| ||||||||    
T  31035535 cgagtatgtgttaaaacagtcatgaaggttttcctataaaagaagagtgtatatcactt 31035593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 363 - 501
Target Start/End: Complemental strand, 21517670 - 21517542
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||||| |||||| ||||||||||||          | |||| |||||||||||||| | ||||| |||||||||||||| |||||      
T  21517670 taaagggtgaaaaaatgaataacggatttttccggatt----------acaactccaaaaaatagggcgtgctacataatgtttccggattacataattc 21517581  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagtt 501  Q
    ||||||||| |||||||  |||||||| |||||||||||    
T  21517580 ggaaaccccttaaacaccatttttcaaagtaaaacagtt 21517542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 34 - 210
Target Start/End: Original strand, 31069919 - 31070097
Alignment:
Q  34 atattggagtttcttcttctactgtaaccttgtgcatgagtttagacttgtaactttggtt-ttctcttaagatatgtagtataccgcaacaagtcccac 132  Q
    |||||||||||||| | |||  ||||||||| |||||||||||||| ||| |||||||||| ||||||||||| |||||||||||| || | ||||||||    
T  31069919 atattggagtttctgcatctcttgtaacctt-tgcatgagtttagatttg-aactttggttattctcttaagacatgtagtataccacagctagtcccac 31070016  T
Q  133 atcgagtatacgttaaaacagcactgaagtttt---tataaaataagagtgtgtatcacttagtaactcatagttggggac 210  Q
    |||||| ||  || |||||||     ||| |||   |||||||||||||||| ||||||  | ||| ||||||||||||||    
T  31070017 atcgaggatgtgtcaaaacagtcagaaagatttacctataaaataagagtgtatatcaccaattaagtcatagttggggac 31070097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 152
Target Start/End: Original strand, 31110481 - 31110566
Alignment:
Q  67 gcatgagtttagacttgtaactttggttttctcttaagatatgtagtataccgcaacaagtcccacatcgagtatacgttaaaaca 152  Q
    ||||||||||||||||| ||||| ||||||||||| ||  |||||||| ||  |||||| |||||||||||||||  |||||||||    
T  31110481 gcatgagtttagacttgaaacttcggttttctcttcaggcatgtagtaaacaacaacaaatcccacatcgagtatgtgttaaaaca 31110566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 517 - 613
Target Start/End: Original strand, 29519399 - 29519503
Alignment:
Q  517 tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    ||||||||||||||||||||||||||||||||        ||||||| | | ||||||||||||| ||||| ||||| || | |||||||||||||||||    
T  29519399 tatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggaaaatattaatcttcctaactatcatccttctattttgggtcattgttac 29519498  T
Q  609 ttgtt 613  Q
     ||||    
T  29519499 gtgtt 29519503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 31096457 - 31096398
Alignment:
Q  9 tgtgtgagacacttattttctttaaatattggagtttcttcttctactgtaaccttgtgc 68  Q
    |||||| ||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||    
T  31096457 tgtgtgtgacacttatttcctttagatattggagtttattcttctgctgtaaccttgtgc 31096398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 60 - 153
Target Start/End: Original strand, 31056712 - 31056806
Alignment:
Q  60 accttgtgcatgagtttagacttgtaactttggtttt-ctcttaagatatgtagtataccgcaacaagtcccacatcgagtatacgttaaaacag 153  Q
    ||||| |||||||||||||||| | ||||||| |||| ||||  |   |||||||||||| ||||||||||||||||||||||  ||||||||||    
T  31056712 accttctgcatgagtttagactcgaaactttgatttttctctacaagcatgtagtataccacaacaagtcccacatcgagtatgtgttaaaacag 31056806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 549 - 613
Target Start/End: Complemental strand, 21515030 - 21514966
Alignment:
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||| ||||||||||||||| ||||||||||| || |  |||||||||||||||| ||||    
T  21515030 cattttagggacaatattaatcttcctaactctcatccttctcctttgggtcattgttacctgtt 21514966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 549 - 613
Target Start/End: Original strand, 32044542 - 32044606
Alignment:
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||| ||||||||||||||| ||||||| ||| || |||||||| |||||||||| ||||    
T  32044542 cattttagggacaatattaatcttcctaactcttatccttttgttttggatcattgttacctgtt 32044606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 31045951 - 31046044
Alignment:
Q  121 aacaagtcccacatcgagtatacgttaaaacagcactgaagtttt---tataaaataagagtgtgtatcacttagtaactcatagttggggacc 211  Q
    |||||||||||||||||||||  ||||||||||   ||||| |||   |||||||||||||||| ||||||  | || ||||||||||||||||    
T  31045951 aacaagtcccacatcgagtatgtgttaaaacaggcatgaagatttccctataaaataagagtgtatatcacccattatctcatagttggggacc 31046044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 524 - 607
Target Start/End: Complemental strand, 7734358 - 7734267
Alignment:
Q  524 acaaattctaaacatgtttgtaacac--------attttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    ||||||||||||||||||||||||||        |||||| | ||||||||||||||| ||||| ||||| || |||||||| |||||||||    
T  7734358 acaaattctaaacatgtttgtaacacgaattgtcattttatggacaatattaatcttcctaactatcatccttttgttttggatcattgtta 7734267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 562 - 607
Target Start/End: Original strand, 16450387 - 16450432
Alignment:
Q  562 atattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    |||||||||||| ||| ||||||||||||||||| |||||||||||    
T  16450387 atattaatcttcctaaatctcatcattatgttttaggtcattgtta 16450432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 31027096 - 31027204
Alignment:
Q  107 atgtagtataccgcaacaagtcccacatcgagtatacgttaaaacag-cactgaagtttt--tataaaataagagtgtgtatcacttagtaactcatagt 203  Q
    |||||||||||| |||| |||| ||||||||||||  |||||||||| ||| || ||||   |||||||||||||||| ||||||  | | | |||||||    
T  31027096 atgtagtataccacaactagtctcacatcgagtatgtgttaaaacaggcacagaggtttacctataaaataagagtgtatatcaccaatttagtcatagt 31027195  T
Q  204 tggggacca 212  Q
    |||||||||    
T  31027196 tggggacca 31027204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 517 - 613
Target Start/End: Original strand, 236914 - 237018
Alignment:
Q  517 tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    |||||||||||||| | |||||||||||||||        ||||||| | || |||||||||||| ||||||||||| || | |||| |||||||||||     
T  236914 tatcagcacaaattatgaacatgtttgtaacatggaaaatcattttaaggaccatattaatcttcctaactctcatcgttctattttaggtcattgttag 237013  T
Q  609 ttgtt 613  Q
    |||||    
T  237014 ttgtt 237018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 31096219 - 31096172
Alignment:
Q  224 ttgttgtggttgttgctgggaattacaagcgattgcatttttaaataa 271  Q
    ||||| ||||||||  ||||||||||||| ||||||||||||||||||    
T  31096219 ttgttttggttgtttttgggaattacaagtgattgcatttttaaataa 31096172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 479
Target Start/End: Complemental strand, 29289799 - 29289710
Alignment:
Q  389 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacac 479  Q
    ||||| |||||||||||||| |||| | | |||||||||| | || ||  |||| |||||||||||||||||||| | ||||| |||||||    
T  29289799 ttttttcggattttgtaatctgaaaccct-aaaaaataggacacgctatttgatttttccggattatataatctgaacaccccttaaacac 29289710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 31110875 - 31110920
Alignment:
Q  224 ttgttgtggttgttgctgggaattacaagcgattgcatttttaaat 269  Q
    ||||||||||||||| ||||  ||||||| ||||||||||||||||    
T  31110875 ttgttgtggttgttgttgggctttacaagtgattgcatttttaaat 31110920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 559 - 607
Target Start/End: Complemental strand, 6704115 - 6704067
Alignment:
Q  559 acaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    ||||||||||||||| ||||||||||||||   |||| |||||||||||    
T  6704115 acaatattaatcttcctaactctcatcattcgattttaggtcattgtta 6704067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 8e-72; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 363 - 602
Target Start/End: Complemental strand, 32817810 - 32817557
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||     
T  32817810 taaagggtgaaaaaatgagtaacgggtttttccagattttgtaatccggaaacttcaaaaaatagggcgcattacatgatgtttccagattacataatcc 32817711  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    | ||||||||||||||| ||||||||||||||||||||||  ||||||||||||      ||||||||||||| ||||||||||||||||||            
T  32817710 gaaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaatcctaaacatgtttgtaacatggatagt 32817611  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcat 602  Q
    ||||||||| ||||||||||||||| |||||| |||| || |||||||||||||    
T  32817610 cattttagggacaatattaatcttcctaactcccatccttctgttttgggtcat 32817557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 15070041 - 15069776
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||| ||| ||||||||||||| | ||| |||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||     
T  15070041 taaagggagaacaaatgagtaacggatattttcggattttgtaatccggaaacttcaaaaaataggacgtgttacatgatgtttccggattatataatcc 15069942  T
Q  463 ggaaa-ccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca------- 548  Q
    ||||| ||||||||||||  ||||||||| |||||||||||| ||||||||||||      |||||||||||||| |||||||||||||||||           
T  15069941 ggaaacccccctaaacaccatttttcaagataaaacagttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatag 15069842  T
Q  549 -cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     ||||||||  ||||||||||||||  ||||| ||||| || |||||||| |||||||||||||||    
T  15069841 tcattttagagacaatattaatcttactaactttcatccttctgttttggatcattgttacttgtt 15069776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 363 - 607
Target Start/End: Original strand, 42545928 - 42546185
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | || |||     
T  42545928 taaagggtgaaaaa-tgaataacggatttttccggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggataacatgatcc 42546026  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    | ||||||||||| ||| ||||||||||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||            
T  42546027 gaaaaccccctaagcaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 42546126  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    ||||||||  | |||||||||| |  ||||||||||| || ||||||||||||||||||    
T  42546127 cattttagagataatattaatcattctaactctcatccttctgttttgggtcattgtta 42546185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 44573295 - 44573032
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||     
T  44573295 taaagggtgaaaaaatgagtaacagattttttcggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatcc 44573196  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcctatc-----agcacaaattctaaacatgtttgtaaca--------c 549  Q
    ||||| ||| ||||| |  ||||||||||||||| |||||  |||||||||||  | |     |||||||||| |||||||||||||||||        |    
T  44573195 ggaaatcccttaaactccttttttcaaggtaaaatagttcggattatataatctgaactgtatagcacaaattataaacatgtttgtaacatgaatagtc 44573096  T
Q  550 attttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||||| ||||||||||||||  ||||||||||| || |||||||| |||||||||||||||    
T  44573095 attttagggacaatattaatctttctaactctcatccttctgttttggatcattgttacttgtt 44573032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 371 - 613
Target Start/End: Complemental strand, 45047041 - 45046785
Alignment:
Q  371 gaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccc 470  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||| |||| |||||| ||||||||    
T  45047041 gaaaaaatgagtaacggatttttccggattttgtaatccgaaaacttcaaaaaagagggc-cattacatgatgtttccgaattacataatccggaaaccc 45046943  T
Q  471 cctaaaca-ctctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------catttta 555  Q
    |||||||| | | ||||||| |||||| |||||  ||| ||||||||      ||||||||||||||||||||||||||||||||        ||||| |    
T  45046942 cctaaacacccccttttcaatgtaaaatagttcggattgtataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttca 45046843  T
Q  556 ggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    || ||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  45046842 gggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgtt 45046785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 398 - 613
Target Start/End: Original strand, 49677478 - 49677707
Alignment:
Q  398 attttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaac 497  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||| | |||||||||||||||    
T  49677478 attttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccagaaaccccctaaacaccccttttcaaggtaaaac 49677577  T
Q  498 agttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctca 583  Q
    |||||  ||||||||||||      |||||||| ||||||||| |||||||||||||        ||||||||| ||||||||||||||| |||||||||    
T  49677578 agttcggattatataatccgaactgtatcagcataaattctaaccatgtttgtaacatagatagtcattttagggacaatattaatcttcctaactctca 49677677  T
Q  584 tcattatgttttgggtcattgttacttgtt 613  Q
    |  |||||||||||||||||||||| ||||    
T  49677678 ttcttatgttttgggtcattgttacatgtt 49677707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 33611606 - 33611345
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||| ||||| |||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33611606 agggtgaaaaatggagttacggattttttcggattttgtaatttggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatctgga 33611507  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    |||||||||||||| |||||| ||||||||| |||||  ||||||||||||      ||||||||||||| |||||||| |||||||||        |||    
T  33611506 aaccccctaaacacccttttttaaggtaaaatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccat 33611407  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||| | |||||||| |||||| ||| ||| ||| || ||||||||||||||||||| ||||    
T  33611406 tttaaggacaatatttatcttcctaaatcttatccttttgttttgggtcattgttacctgtt 33611345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 368 - 613
Target Start/End: Original strand, 23442703 - 23442962
Alignment:
Q  368 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaa 467  Q
    |||||||||  |||| |||| |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  23442703 ggtgaaaaatggagttacggatttttccggattttataatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataattcggaaa 23442802  T
Q  468 ccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattt 553  Q
    ||||| |||||   ||||| ||||||||| |||||  ||||||||||||      ||||||||||||| |||||||| |||||||||        |||||    
T  23442803 ccccccaaacatctttttttaaggtaaaatagttcggattatataatccaaactgtatcagcacaaatcctaaacatatttgtaacatgtacagccattt 23442902  T
Q  554 taggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||| ||||||||||||||| ||||||| ||| || ||||||||||||||||||| ||||    
T  23442903 tagggacaatattaatcttcctaactcttatccttttgttttgggtcattgttacctgtt 23442962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 389 - 613
Target Start/End: Complemental strand, 34162894 - 34162656
Alignment:
Q  389 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttca 488  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  34162894 tttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttagatgatgtttccggattacataatccggaaaccccctaaacaccctttttca 34162795  T
Q  489 aggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcg 574  Q
    |||| |||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||        ||||||||| |||||||||||||||     
T  34162794 aggt-aaacagttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagccattttagggacaatattaatcttcc 34162696  T
Q  575 taactctcatcattatg-ttttgggtcattgttacttgtt 613  Q
    ||||||  ||| ||  | ||||||||||||||||| ||||    
T  34162695 taactcctatccttccgtttttgggtcattgttacatgtt 34162656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 372 - 613
Target Start/End: Complemental strand, 40650865 - 40650610
Alignment:
Q  372 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 471  Q
    |||||||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||| ||||||||||||||| |||||| |||||| |||||||||    
T  40650865 aaaaaatgagtaacggattttttcggaatttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttctggattacataatccggaaacccc 40650766  T
Q  472 ctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cattttagg 557  Q
     |||||||  |||||||||||||||||||||  ||||||| |||       |||||||||||||| ||| |||||||||||||        |||||||||    
T  40650765 ttaaacaccatttttcaaggtaaaacagttcggattatatgatctgaactgtatcagcacaaattataaccatgtttgtaacatggataatcattttagg 40650666  T
Q  558 aacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     ||||||||||||||| ||||||||||| || |  |||||||||||||||| ||||    
T  40650665 gacaatattaatcttcctaactctcatccttctcgtttgggtcattgttacctgtt 40650610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 41584866 - 41584600
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||   ||| ||||||||||| ||||||||||||||| ||| |||||||| ||||||  |||||||||||||| ||||||| |||||| |||    
T  41584866 agggtgaaaaatgaagttacgggtttttctggattttgtaatccggaaatttcaaaaactagggcatgttacatgatgttttcggattacataatccgga 41584767  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc-----------tatcagcacaaattctaaacatgtttgtaaca------ 548  Q
    |||||||||||||  ||||||||||||||| ||||||  ||||||||||||           ||||||||||||||||||||||||||||||||          
T  41584766 aaccccctaaacatcctttttcaaggtaaatcagttcggattatataatccaatccgaactgtatcagcacaaattctaaacatgtttgtaacatggata 41584667  T
Q  549 --cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
      ||||||| | ||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  41584666 gtcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgtt 41584600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 17000342 - 17000603
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||| ||||||||||||||||||| || |||| ||||| |||||||| ||||| |||||||||| |||||| |||||| |||    
T  17000342 agggtgaaaaatggagttacgg-tttttccggattttgtaattcggaaacatcaaataatagggcacgttagatgatgtttctggattacataatccgga 17000440  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    ||||||||||||||  ||||||||||||||||||||   |||||||||||       ||||||||||||||||||||||||||||||||        |||    
T  17000441 aaccccctaaacaccatttttcaaggtaaaacagtttgaattatataatctgagctgtatcagcacaaattctaaacatgtttgtaacatggatagtcat 17000540  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatg-ttttgggtcattgttacttgtt 613  Q
    |||||| ||||||||||||||| ||||||||||| ||  | ||||||||||||||||| ||||    
T  17000541 tttagggacaatattaatcttcctaactctcatccttccgtttttgggtcattgttacctgtt 17000603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 40908133 - 40907869
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||||||||||||||||||| |||||  | |||||| |||||| |||||||||||||| ||||| | |||||||||||| ||||||| ||||||     
T  40908133 taaagggtgaaaaaatgagtaacggattttttagaattttgcaatccggaaacttcaaaaaattgggcgtgctacatgatgttttcggattacataatcc 40908034  T
Q  463 ggaaaccccctaaacactc-tttttcaaggtaaaacagttcatattatat-----aatcctatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    | ||||||||||||||| | ||||| |||||||||||||||  |||||||     ||   ||||||||||||||||||||||||||||||||            
T  40908033 gaaaaccccctaaacaccctttttttaaggtaaaacagttcggattatatatctgaactgtatcagcacaaattctaaacatgtttgtaacatggataat 40907934  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||  ||||||||||||||| |||||| |||| || || |||||||||||||||| ||||    
T  40907933 cattttagagacaatattaatcttcctaactcccatctttctgctttgggtcattgttacctgtt 40907869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 363 - 605
Target Start/End: Original strand, 7011169 - 7011426
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttcc-ggattttgtaatccgaaaacttcaaaaaata-gggcgcgttacatgatgtttccggattatataat 460  Q
    |||||||||||||| |||||||||| ||||| | ||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| || || ||||    
T  7011169 taaagggtgaaaaa-tgagtaacggattttttctggattttgtaatccggaaacttcaaaaaaaaagggcgcgttacatgatgtttccgaatcatgtaat 7011267  T
Q  461 ctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca------ 548  Q
    | | ||||||||||||||   ||||||||||||||| |||||  ||||||||||||      |||||||| ||||||||||||||||| |||||          
T  7011268 ccgaaaaccccctaaacatcatttttcaaggtaaaatagttcggattatataatccgaactgtatcagcaaaaattctaaacatgtttctaacatggata 7011367  T
Q  549 --cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgt 605  Q
      ||||||||| ||||||||||||||| ||||||||||| || |||||| |||||||||    
T  7011368 gtcattttagggacaatattaatcttcttaactctcatccttctgttttaggtcattgt 7011426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 18583740 - 18583479
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||   ||| ||||  ||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| ||||||| |||||| |||    
T  18583740 agggtgaaaaatgaagttacggacttttccggattttgtaatctggaaacttaaaaaaatagggcgcgttacatgatgttttcggattacataatccgga 18583641  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    ||||||||||||||  ||||| ||||||||| |||||  |||||||||||       |||| |||||||| |||||||| |||||||||        |||    
T  18583640 aaccccctaaacacctttttttaaggtaaaatagttcggattatataatctgaactgtatcggcacaaatcctaaacatatttgtaacatgtatagccat 18583541  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||| ||||||||||||| | ||||||| ||| || ||||||||||||||||||| ||||    
T  18583540 tttagggacaatattaatctgcctaactcttatccttttgttttgggtcattgttacctgtt 18583479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 49786232 - 49786492
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| | || ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| |||    
T  49786232 agggtgaaaaatggagttatggatttttccggattttgcaatccgaaaactttaaaaaataggacgcgttacatgatgtttccggattacataatccgga 49786331  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    ||||||| |||||| |||||| ||| ||||| |||||  ||||||||||||      ||||||||||||| |||||| | |||||||||        |||    
T  49786332 aaccccc-aaacacccttttttaagataaaatagttcggattatataatcctaactgtatcagcacaaatcctaaacttatttgtaacatgtatagccat 49786430  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||| | ||||||||||||||| ||||||| ||| || |||||||||||| |||||| ||||    
T  49786431 tttatggacaatattaatcttcctaactcttatccttttgttttgggtcaatgttacatgtt 49786492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 45568076 - 45567825
Alignment:
Q  363 taaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 461  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||||||||||||| |||||||| |||  |||||| || |||    
T  45568076 taaagggtgaaaaaaatgagtaacgggtttttccgaattttgtaattcggaaacttcaaaaaatagggcgcgctacatgatatttttggattacatgatc 45567977  T
Q  462 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcctatcagcacaaattctaaacatgtttgtaaca--------cattt 553  Q
     | ||||||||||||||| |||||| ||||||||||| | |         ||   |||||||||||||||||||||||||||||| |        |||||    
T  45567976 cgaaaaccccctaaacaccctttttaaaggtaaaacaatcc--------gaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattt 45567885  T
Q  554 taggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||| ||||||||||||||  |||||||||||  | ||||||||||||||||||| ||||    
T  45567884 tagggacaatattaatctttctaactctcatccatttgttttgggtcattgttacctgtt 45567825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 363 - 613
Target Start/End: Original strand, 38885199 - 38885437
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||||||||||||||||| | ||||||||||||           | |||| |||||| |||||| ||||||||||||||| | |||| ||||||     
T  38885199 taaagggtgaaaaaatgagtaacagatttttccggatt-----------acacttaaaaaaagagggcgtgttacatgatgtttcag-attacataatcc 38885286  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaacacattttag 556  Q
    ||||||||| ||||||| |||||||||||||||||| |||  ||||||||||||      |||||||||||||||||||||||| |      |||||||     
T  38885287 ggaaaccccttaaacaccctttttcaaggtaaaacatttcggattatataatccgaactgtatcagcacaaattctaaacatgtgt------cattttaa 38885380  T
Q  557 gaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    | ||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||    
T  38885381 ggacaatattaattttcctaactctcatccttctgttttgggtcattgttacttgtt 38885437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 390 - 613
Target Start/End: Original strand, 34006246 - 34006485
Alignment:
Q  390 ttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaa 489  Q
    ||||||||||||| ||||||| ||| |||||||||||||||| | |||||||| ||||||||||| ||||| || | ||||| ||||||| |||||||||    
T  34006246 ttttccggattttttaatccggaaaattcaaaaaatagggcgggctacatgatttttccggattacataatttgaacaccccataaacaccctttttcaa 34006345  T
Q  490 -ggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------catttta-ggaacaatattaatcttc 573  Q
     || ||||||||||| ||||||||||||      ||| |||||||||| |||| ||||||||||||        ||||||| ||||||||||||||||||    
T  34006346 gggaaaaacagttcagattatataatccaaattgtattagcacaaattttaaagatgtttgtaacatggatagtcattttagggaacaatattaatcttc 34006445  T
Q  574 gtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     ||||||||||| || | ||||| ||||||| ||| ||||    
T  34006446 ctaactctcatccttctattttgtgtcattgctacctgtt 34006485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 363 - 486
Target Start/End: Complemental strand, 43319395 - 43319272
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| |||  | |||||||| ||||||||||||||| ||| ||||||| ||||||     
T  43319395 taaagggtgaaaaaatgagttacggatttttccggattttgtaatccggaaatctaaaaaaatatggcgcgttacatgattttttcggattacataatcc 43319296  T
Q  463 ggaaaccccctaaacactcttttt 486  Q
    | ||||||||||||||||||||||    
T  43319295 gaaaaccccctaaacactcttttt 43319272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 389 - 613
Target Start/End: Complemental strand, 28866803 - 28866565
Alignment:
Q  389 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttca 488  Q
    |||||||||||||||||||||| || ||  ||||||||||||||| |||||||| ||||||||||| |||||||| | |||| |||||||| |||||| |    
T  28866803 tttttccggattttgtaatccggaa-ctataaaaaatagggcgcgctacatgatttttccggattacataatctgaacacccgctaaacaccctttttaa 28866705  T
Q  489 a-ggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttc 573  Q
    | || ||||||||||  |||||||||||       |||||||||||||| |||||||||||||||||        ||||||| | ||| | |||||||||    
T  28866704 agggaaaaacagttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagccattttatggacatttttaatcttc 28866605  T
Q  574 gtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     ||||||||||| || ||||||||| ||||||||| ||||    
T  28866604 ataactctcatccttctgttttgggacattgttacctgtt 28866565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 395 - 548
Target Start/End: Original strand, 32542388 - 32542544
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaa 494  Q
    |||||||||||||||| || ||||||||||||||| |||||||||||||||| ||||||| ||||||  |||||||||||||||| ||||   |||||||    
T  32542388 cggattttgtaatccggaatcttcaaaaaatagggtgcgttacatgatgtttacggattacataatccagaaaccccctaaacacccttt---aaggtaa 32542484  T
Q  495 aacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca 548  Q
    || |||||  ||||||||||||      ||||||||||||| |||||||| |||||||||    
T  32542485 aatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaaca 32542544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 366 - 548
Target Start/End: Complemental strand, 6223934 - 6223754
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaa-aaaatagggcgcgttacatgatgtttccggattatataatctgg 464  Q
    ||||||||||||||||| |||| ||||| || |||||  |||||||||||||||| ||||||| |||| ||||||||| |||  |||||| |||||| |     
T  6223934 agggtgaaaaaatgagttacggattttttcgaatttttcaatccgaaaacttcaaaaaaatagagcgcattacatgatttttttggattacataatccga 6223835  T
Q  465 aaaccccctaaacactctttttcaaggt-aaaacagttcatattatataatcctatcagcacaaattctaaacatgtttgtaaca 548  Q
    | ||||| ||||||  |||||||||||| ||||||||||  |||||||||||    || |||||||| |||| ||||||||||||    
T  6223834 acaccccataaacatcctttttcaaggtaaaaacagttcggattatataatc----caacacaaattttaaatatgtttgtaaca 6223754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 30829632 - 30829542
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactcttttt 486  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||| |||||| | ||||||||||||||| ||||||    
T  30829632 cggattttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgttttcggattacataatccgaaaaccccctaaacacccttttt 30829542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 52745016 - 52744937
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 442  Q
    ||||| ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| ||||||||    
T  52745016 taaagtgtgaaaaaatgagtaacggatttttccgaattttgtaatctgaaaacttcaaaaaatagggcgcgctacatgat 52744937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 517 - 613
Target Start/End: Complemental strand, 52744882 - 52744778
Alignment:
Q  517 tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    ||||||||||||| ||||||||||||||||||        |||||||||||||| |||||||||| ||||||||||| || |||||||||||||||||||    
T  52744882 tatcagcacaaatgctaaacatgtttgtaacatggatagtcattttaggaacaacattaatcttcctaactctcatccttctgttttgggtcattgttac 52744783  T
Q  609 ttgtt 613  Q
    |||||    
T  52744782 ttgtt 52744778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 24471481 - 24471390
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaa-ccccctaaacactcttttt 486  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||| | ||| |||||||||||| ||||||    
T  24471481 cggattttgtaatccagaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatccgaaaacccccctaaacacccttttt 24471390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 396 - 607
Target Start/End: Complemental strand, 26723649 - 26723429
Alignment:
Q  396 ggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaa-ggtaa 494  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||| ||||||      |||||| | | ||||||||||||| |||||| || || ||    
T  26723649 ggattttgtaatccggaaacttcaaaaaatagggcg-gctacatgatttttccg-----cataatccgaacaccccctaaacacccttttttaagggaaa 26723556  T
Q  495 aacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------catttta-ggaacaatattaatcttcgtaactc 580  Q
    ||| ||||  ||||||||||||      ||||||||||||||  ||||||||||||||||       ||||||| |||||||||||||||||| | ||||    
T  26723555 aacggttcggattatataatccgaactatatcagcacaaatttaaaacatgtttgtaacatgatagtcattttagggaacaatattaatcttccttactc 26723456  T
Q  581 tcatcattatgttttgggtcattgtta 607  Q
    | |||||| | ||||| ||||||||||    
T  26723455 tgatcattctattttgagtcattgtta 26723429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 479
Target Start/End: Complemental strand, 800969 - 800885
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacac 479  Q
    ||||||||||||||||||||  |||||||||||||||| |||  |||| ||| ||||||||| |||| | | |||||||||||||    
T  800969 cggattttgtaatccgaaaatctcaaaaaatagggcgctttatttgattttttcggattatagaatccgaacaccccctaaacac 800885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 366 - 452
Target Start/End: Original strand, 27794818 - 27794903
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggat 452  Q
    ||||||||||||||||| | || ||||| | ||||||||||||||||||  || ||||||||||||| ||||||||| ||| |||||    
T  27794818 agggtgaaaaaatgagttatggattttttcagattttgtaatccgaaaatctc-aaaaatagggcgctttacatgattttttcggat 27794903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 420 - 486
Target Start/End: Original strand, 38950286 - 38950352
Alignment:
Q  420 aaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactcttttt 486  Q
    ||||||||||||||||||||||| ||| | ||||| |||||| | |||| |||||||||||||||||    
T  38950286 aaaaatagggcgcgttacatgattttttcagattacataatccgaaaactccctaaacactcttttt 38950352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 448 - 613
Target Start/End: Complemental strand, 3561451 - 3561270
Alignment:
Q  448 cggattatataatctggaaaccc-cctaaacactctttttcaaggtaaaa-cagttcatattatataatcc------tatcagcacaaattctaaacatg 539  Q
    ||||||||| |||||| | |||| ||||||||| ||||||||||| |||| | ||||  ||||||||||||      |||||||||||||| | ||||||    
T  3561451 cggattatagaatctgaacaccctcctaaacaccctttttcaagggaaaaacggttcgaattatataatccgaactgtatcagcacaaattatgaacatg 3561352  T
Q  540 tttgtaacaca--------ttttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||| |        ||||| | ||| ||||||||||  |||||||||||||| |||||| ||||||||||| |||||    
T  3561351 tttgtaacatagatagtaattttaaggacagtattaatctttctaactctcatcattctgttttaggtcattgttagttgtt 3561270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 613
Target Start/End: Original strand, 27794991 - 27795054
Alignment:
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||| | ||||||||||||||| ||||| ||||| || ||||||||||||||||||| ||||    
T  27794991 cattttatggacaatattaatcttcctaactatcatc-ttctgttttgggtcattgttacctgtt 27795054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 461
Target Start/End: Original strand, 890500 - 890566
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 461  Q
    |||||||| |||||||||||| ||||||||||||||| ||| | || | ||| ||||||||| ||||    
T  890500 cggattttataatccgaaaacctcaaaaaatagggcgtgttccctgcttttttcggattatagaatc 890566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 433
Target Start/End: Complemental strand, 9446221 - 9446183
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcg 433  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  9446221 cggattttgtaatccgaaaatctcaaaaaatagggcgcg 9446183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 548
Target Start/End: Complemental strand, 24472995 - 24472835
Alignment:
Q  397 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatga--tgtttccggattatataatctggaaaccccctaaacactctttttcaa-ggta 493  Q
    |||||| |||||||||||||||||||||||||| ||| ||| |||  | ||| | ||||||| ||||   | | ||| ||| ||| ||||||||| || |    
T  24472995 gattttataatccgaaaacttcaaaaaatagggtgcgctacttgattttttttcagattatagaatcctaacatcccttaatcaccctttttcaagggaa 24472896  T
Q  494 aaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca 548  Q
    ||||| |||  ||||||||||||      ||| |||||||||| |||||||||||||||||    
T  24472895 aaacaattcggattatataatccgaactatattagcacaaattttaaacatgtttgtaaca 24472835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 549 - 613
Target Start/End: Complemental strand, 25563413 - 25563349
Alignment:
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||| | |||||||||| |||| |||| |||||| || |||||| ||||||||||| |||||    
T  25563413 cattttaaggacaatattaagcttcataaccctcatccttttgttttaggtcattgttagttgtt 25563349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 3e-71; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 363 - 613
Target Start/End: Original strand, 39524698 - 39524962
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||||||||||||| || || |||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| ||||||| |||||      
T  39524698 taaagggtgaaaaaatgagcaatggatttttccggattttgtaatccggaaacttaaaaaaatagggcgtgttacatgatgttttcggattacataattc 39524797  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||      ||||| |||||||||||||||| ||||||| |            
T  39524798 ggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcatcacaaattctaaacatatttgtaatatgtatagt 39524897  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  39524898 cattttaggaacaatattaatcttcctaactctcatccttctgttttgggtcattgttacttgtt 39524962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 363 - 608
Target Start/End: Complemental strand, 38692982 - 38692723
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggttttt-ccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 461  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  38692982 taaagggtgaaaaaatgagtaacgggttttttccgaattttgtaatccggaaacttaaaaaaatagggcgcgttacgtgatgtttccggattacataatc 38692883  T
Q  462 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca------- 548  Q
     ||||| ||||||||||| ||||||||||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||           
T  38692882 cggaaa-cccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggataa 38692784  T
Q  549 -cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
     ||||||| | ||||||||||| ||| ||||||||||| || |||||||||||||||||||    
T  38692783 tcattttaaggacaatattaatattcataactctcatctttctgttttgggtcattgttac 38692723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 368 - 613
Target Start/End: Original strand, 6156658 - 6156917
Alignment:
Q  368 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaa 467  Q
    |||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  6156658 ggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaa 6156757  T
Q  468 ccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattt 553  Q
    |||||||||||| || |||||||||||||| ||||  |||||||||| |      |||||||| |||||||||||||||||||||||        |||||    
T  6156758 ccccctaaacaccctctttcaaggtaaaaccgttcggattatataatacgaattgtatcagcataaattctaaacatgtttgtaacatggatagtcattt 6156857  T
Q  554 taggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||| ||||||||||||||| ||||||||||| || |||||| |||||||||||| ||||    
T  6156858 tagggacaatattaatcttcctaactctcatccttctgtttttggtcattgttacatgtt 6156917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 372 - 613
Target Start/End: Original strand, 38871602 - 38871857
Alignment:
Q  372 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 471  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||| | ||||||     
T  38871602 aaaaaatgagtaacggatttttccggattttgtaatccgaaaacttcataaaatagggggcgttacatgatgtttccggattacataatccgaaaaccct 38871701  T
Q  472 ctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttagg 557  Q
    |||||||   |||||||||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||        |||||||||    
T  38871702 ctaaacatcttttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagg 38871801  T
Q  558 aacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     |||||| |||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  38871802 gacaataataatcttcctaactctcatccttctgttttgggtcattgttacctgtt 38871857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 15799150 - 15799411
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| | |    
T  15799150 agggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaa 15799249  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    |||||||||||||| ||||||||| |||||||| |||| ||||||||||||      ||||||||||||||||||||||||||||||||        |||    
T  15799250 aaccccctaaacaccctttttcaacgtaaaacatttcagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcat 15799349  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||| | ||||||||| ||||| ||| || |||| || ||||||||||||||||||| ||||    
T  15799350 tttatggacaatattattcttcctaattcgcatccttctgttttgggtcattgttacatgtt 15799411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 372 - 608
Target Start/End: Original strand, 20891544 - 20891794
Alignment:
Q  372 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 471  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||| |||| |||||| | |||||||    
T  20891544 aaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcatgttacatgatgtttccgaattacataatccgaaaacccc 20891643  T
Q  472 ctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cattttagg 557  Q
    |||||||| ||||||||||||||||||||||  |||||||||||       ||||||||||||||||||||||||||||||||        |||||||||    
T  20891644 ctaaacaccctttttcaaggtaaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagg 20891743  T
Q  558 aacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
     | ||||||||||||| ||||||||||| || |||||||||| ||||||||    
T  20891744 gataatattaatcttcctaactctcatccttctgttttgggttattgttac 20891794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 28083577 - 28083313
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| ||||||||||| ||||||     
T  28083577 taaagggtgagaaaatgagtaacgggtttttccggattttgtaatccggaaaattcaaaaaatagggcgcattacatgatatttccggattacataatcc 28083478  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    |||||||| |||||||| ||||||||| |||||||||| |  ||||||||||||      |||||||||||||| ||||||| |||||||||            
T  28083477 ggaaaccctctaaacaccctttttcaacgtaaaacagtccggattatataatccgaactgtatcagcacaaattataaacatatttgtaacatggatagt 28083378  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||| ||||||||||||||  ||||| ||||| || |||||| |||||||||||| ||||    
T  28083377 cattttagggacaatattaatctttctaactttcatccttctgtttttggtcattgttacctgtt 28083313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 363 - 584
Target Start/End: Original strand, 38372231 - 38372466
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||| |||||      
T  38372231 taaagggtgaaaaaatgagtaacggatttttctggattttgtaatccggaaacttaaaaaaatagggcgggttacatgatgtttccggattacataattc 38372330  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||||| |||| || ||||||||||||||||||||||| ||||||||||||      ||| |||||||||||||||||||||||| |||            
T  38372331 ggaaaccccttaaataccctttttcaaggtaaaacagttcagattatataatccgaactgtattagcacaaattctaaacatgtttgttacatggatagt 38372430  T
Q  549 cattttaggaacaatattaatcttcgtaactctcat 584  Q
    ||||||||| ||||||||||||||| ||||||||||    
T  38372431 cattttagggacaatattaatcttcctaactctcat 38372466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 365 - 613
Target Start/End: Complemental strand, 40620187 - 40619924
Alignment:
Q  365 aagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgg 464  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| ||||||| |||||| ||    
T  40620187 aagggtgaaaaaatgagtaacagatttttccggattttgtaatccggaaacttcaaaaaatagggcacgttatatgatgttttcggattacataatccgg 40620088  T
Q  465 aaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------ca 550  Q
    ||||||||||||||   ||||||||||||||| | |||| ||||||||||||      |||||| |||||||||||||||| ||||||||        ||    
T  40620087 aaaccccctaaacatcatttttcaaggtaaaatatttcagattatataatccgaattgtatcagtacaaattctaaacatgcttgtaacatggacaatca 40619988  T
Q  551 ttttaggaacaatattaatcttcgtaactctcat-cattatgttttgggtcattgttacttgtt 613  Q
    ||||||| ||||||||||||||| |||||||||| | || ||||||||||||||||||| ||||    
T  40619987 ttttagggacaatattaatcttcctaactctcatcccttctgttttgggtcattgttacctgtt 40619924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 4064916 - 4064654
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| ||||||||||||||||| ||||||||| |||||| ||||||||||||| |||| ||||||||||||||||| |||||| |||    
T  4064916 agggtgaaaaatggagttacgggtttttccggattatgtaatccggaaactttaaaaaatagggcgtgttagatgatgtttccggattacataatccgga 4064817  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||        |||    
T  4064816 aaccccctaaacaccctttttcaaggtaaaacagttcgaattatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagtcat 4064717  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattat-gttttgggtcattgttacttgtt 613  Q
    |||||| ||||| ||||||||| ||||| ||||| || |  ||||||||||||||||| ||||    
T  4064716 tttagggacaatgttaatcttcctaactatcatccttctatttttgggtcattgttacctgtt 4064654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 397 - 613
Target Start/End: Complemental strand, 31221504 - 31221274
Alignment:
Q  397 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaa 496  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |||||||| |||||||| ||||||||||||||||    
T  31221504 gattctgtaatccgaaaacttcaaaaaatatggcgcgttacatgatgtttctggattacataatccggaaaccctctaaacaccctttttcaaggtaaaa 31221405  T
Q  497 cagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctc 582  Q
    ||||||  ||||||||||||      |||||||||||||| |||||||||||||||||        ||||||||| ||||||||||||||| ||||||||    
T  31221404 cagttcggattatataatccaaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctc 31221305  T
Q  583 atcattatgttttgggtcattgttacttgtt 613  Q
    ||| || ||||||||||||||||||| ||||    
T  31221304 atctttctgttttgggtcattgttacatgtt 31221274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 33487535 - 33487797
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| |||||| |||    
T  33487535 agggtgaaaaatggagttacgggtttttccgaattttgtaatccgaaaacttcaaaaaatagggcgcgttatatgatgttttcgggttacataatccgga 33487634  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    ||| |||||||||| | ||||||||||||||||||||  ||||||||||||      ||||||||||||||||||| ||||||||||||        |||    
T  33487635 aactccctaaacaccccttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcat 33487734  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcatt-atgttttgggtcattgttacttgtt 613  Q
    |||||| ||||||||||||||| ||||||||||| || |  ||||||||||||||||| ||||    
T  33487735 tttagggacaatattaatcttcctaactctcatccttcagtttttgggtcattgttacatgtt 33487797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 369 - 548
Target Start/End: Original strand, 25746954 - 25747138
Alignment:
Q  369 gtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaac 468  Q
    ||||||||||||||||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||     
T  25746954 gtgaaaaaatgagtaacggatttttccggattttctaatccggaaacttcaaaa-atagggcgcgttacatgatgttttcggattacataatccggaaat 25747052  T
Q  469 cccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca 548  Q
    |||||||||||  ||||| |||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||    
T  25747053 cccctaaacaccattttttaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaaca 25747138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 363 - 613
Target Start/End: Original strand, 15957672 - 15957935
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||||||| |||||||| || ||||||||||||||||||| || ||||||| ||||||||||||  ||||||||||||||||||||| ||||||     
T  15957672 taaagggtgaaaa-atgagtaatggatttttccggattttgtaattcggaaacttcgaaaaatagggcgtattacatgatgtttccggattaaataatcc 15957770  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||||||||||||| | |||||||||||||||||||   |||||||||||       |||||| |||||||||||||||||||||||||            
T  15957771 ggaaaccccctaaacacccattttcaaggtaaaacagtttggattatataatctgaactgtatcagtacaaattctaaacatgtttgtaacatagatagt 15957870  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     |||||||| ||||||||||||||| |||||||  |  || |||||||||||||| |||| ||||    
T  15957871 aattttagggacaatattaatcttcctaactctggttcttttgttttgggtcattattacctgtt 15957935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 24203879 - 24203619
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||| |||||||| |||| | ||||| ||||||||||||||     ||||||||||||||||||||||||||||||||||||||||| ||||||     
T  24203879 taaagggtggaaaaatgattaacagattttttcggattttgtaatcg----acttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 24203784  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaac--------a 548  Q
    ||||||||||||||||| |||||| | |||||||||||||   |||||||||||      |||||||| ||||||||||||||||||||||             
T  24203783 ggaaaccccctaaacacccttttttagggtaaaacagttcgggttatataatccgaactgtatcagcataaattctaaacatgtttgtaactgggataat 24203684  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||| | ||||||||||| ||| ||||||||| | || |||||||| |||||||||| ||||    
T  24203683 cattttaaggacaatattaatgttcctaactctcaaccttctgttttggatcattgttacctgtt 24203619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 411 - 613
Target Start/End: Original strand, 29862582 - 29862799
Alignment:
Q  411 aaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattata 510  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||||| |||||||||||||||||  |||||||||||||||||||||  ||||||    
T  29862582 aaaacttcaaaaaatagggcgcgttaggtgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaacagttcgaattata 29862681  T
Q  511 taatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatg-tttt 595  Q
    ||||||      ||||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||| ||||| ||||| ||  | ||||    
T  29862682 taatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatccttccgttttt 29862781  T
Q  596 gggtcattgttacttgtt 613  Q
    |||||||| |||| ||||    
T  29862782 gggtcattattacctgtt 29862799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 367 - 548
Target Start/End: Complemental strand, 26190493 - 26190306
Alignment:
Q  367 gggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaa 466  Q
    ||||||||||  |||| |||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||| |||||   |||    
T  26190493 gggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggtgcgttacatgatgttttcggattacataattcagaa 26190394  T
Q  467 accccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca 548  Q
    ||||||||||||| |||||| ||||||||| |||||  ||||||||||||      ||||||||||||| |||||||| |||||||||    
T  26190393 accccctaaacacccttttttaaggtaaaatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaaca 26190306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 367 - 613
Target Start/End: Complemental strand, 37183977 - 37183716
Alignment:
Q  367 gggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaa 466  Q
    ||||||||||||||||||| | ||||||  ||||||||||||   ||||||||||||||||||| ||||||||||| ||| | ||||| |||||| ||||    
T  37183977 gggtgaaaaaatgagtaacagatttttctagattttgtaatcttgaaacttcaaaaaatagggcacgttacatgatattttcagattacataatccggaa 37183878  T
Q  467 accccctaaacactc-tttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    |||| |||||||| | |||||||||| ||||||||    |||||||||||       ||||| ||||||||||||| ||||||||||||        |||    
T  37183877 accctctaaacacccttttttcaaggcaaaacagtctggattatataatctgaactgtatcaacacaaattctaaatatgtttgtaacatggatagtcat 37183778  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||| | ||||||||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  37183777 tttatggacaatattaatcttcctaactctcatctttttgttttgggtcattgttacttgtt 37183716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 12465302 - 12465054
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||   |||| |||    
T  12465302 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttccggatta---aatccgga 12465206  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcctatcagcacaaattctaaacatgtttgtaaca--------cattttagg 557  Q
    || |||||||||||  |||||  |||||||| |||||  | ||||||||||    ||||||||| |||||||| ||||||| |         ||||||||    
T  12465205 aa-cccctaaacaccatttttttaggtaaaatagttctgagtatataatcc---gagcacaaatcctaaacatatttgtaatatgtatagttattttagg 12465110  T
Q  558 aacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     ||||||||||||||| ||||||| ||| || |||||||| |||||||||||||||    
T  12465109 gacaatattaatcttcataactcttatccttttgttttggatcattgttacttgtt 12465054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 27212633 - 27212890
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||  ||||||||||||| |||||||||||| ||| ||||||| |||| | | |    
T  27212633 agggtgaaaaaatgagttacgggttttttcggattttgtaatccgaaaatctcaaaaaatagggtgcgttacatgattttttcggattacataaccagaa 27212732  T
Q  466 aaccccctaaacactctttttcaa-ggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaacaca---tttta 555  Q
     || |||| ||||| |||||| || || ||||||||||  |||||||||| |      |||||| ||||||| ||||||||||||||||| |     | |    
T  27212733 cacaccctgaacaccctttttgaagggaaaaacagttcggattatataattcgaactatatcagtacaaattataaacatgtttgtaacatagatagtca 27212832  T
Q  556 ggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     ||||||||||||||||| ||||||||||| || || |||| ||||||||||| ||||    
T  27212833 tgaacaatattaatcttcctaactctcatccttctggtttgagtcattgttacctgtt 27212890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 389 - 613
Target Start/End: Complemental strand, 32842145 - 32841905
Alignment:
Q  389 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttca 488  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || || || ||||  ||||| |||||| | | ||||| ||||||| ||||||||    
T  32842145 tttttccggattttgtaatccggaaacttcaaaaaatagggcgcgctagataatttttcaagattacataatccgaacaccccataaacaccctttttca 32842046  T
Q  489 a-ggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------catttta-ggaacaatattaatctt 572  Q
    | || ||||||||||  |||||||||| |      |||||||||||||| |||||||||||||||||        ||||||| |||||||||||||||||    
T  32842045 agggaaaaacagttcggattatataattcgaattgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagggaacaatattaatctt 32841946  T
Q  573 cgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    | ||||||||||| || | ||||| ||||||||||| ||||    
T  32841945 cctaactctcatccttctattttgagtcattgttacatgtt 32841905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 31929304 - 31929060
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||  ||| |||||||||||||||||                  |||| ||||||     
T  31929304 taaagggtgaaaaa-tgagtaacggatttttccggattttgtaatccagaaatttcaaaaaatagggcgc------------------attacataatcc 31929224  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||||||||||||| | ||||||||||||||||||||  |||||||||||       |||||||||||||| |||||||||||||||||            
T  31929223 ggaaaccccctaaacaccccttttcaaggtaaaacagttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagt 31929124  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||| ||||||||||||||| ||||||||||| || ||||||| ||||||||||| ||||    
T  31929123 cattttagg-acaatattaatcttcctaactctcatccttctgttttgagtcattgttacctgtt 31929060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 366 - 486
Target Start/End: Original strand, 26319043 - 26319162
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||| |||||||||||||||| ||||| ||||||| |||| ||||| |||||||||||||||||||||||| |||||| | |    
T  26319043 agggtgaaaaatggagttacggatttttccggattttgttatccggaaacttccaaaa-tagggtgcgttacatgatgtttccggattacataatccgaa 26319141  T
Q  466 aaccccctaaacactcttttt 486  Q
    |||||||||||||| ||||||    
T  26319142 aaccccctaaacacccttttt 26319162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 395 - 490
Target Start/End: Original strand, 14111851 - 14111946
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaag 490  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||  |||||| |||||||| ||| ||||||||||| ||||||||||    
T  14111851 cggattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgtttttggattacataatctgaaaatcccctaaacaccctttttcaag 14111946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 366 - 454
Target Start/End: Complemental strand, 37095110 - 37095023
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggatta 454  Q
    |||||||||||  |||| |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  37095110 agggtgaaaaatggagttacggatttttccggattttgtaatccgaaaactt-aaaaaataaggcgcgttacatgatgtttccggatta 37095023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 34440688 - 34440778
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactcttttt 486  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||  |||||| | ||||||||||||||| ||||||    
T  34440688 cggattttgtaatccgaaaacttcaaaaa-taggacgcgttacatgatgttttcggattgcataatccgaaaaccccctaaacacccttttt 34440778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 363 - 479
Target Start/End: Complemental strand, 36359784 - 36359669
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||| ||||| ||||  |||| |||||||||||||||  |||  |||||||||||| ||||| ||||||| ||| ||||||| |||||||    
T  36359784 taaagggtgaaaaa-tgagttacggaatttttcggattttgtaatccagaaatctcaaaaaataggacgcgtaacatgattttttcggattacataatct 36359686  T
Q  463 ggaaaccccctaaacac 479  Q
    | |||||||||||||||    
T  36359685 gaaaaccccctaaacac 36359669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 389 - 496
Target Start/End: Original strand, 8032219 - 8032326
Alignment:
Q  389 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttca 488  Q
    ||||| |||||||||||||| | ||| ||||||||||||||| | ||||||||| ||||||||||| |||||| | | ||| ||||||||| ||||||||    
T  8032219 ttttttcggattttgtaatctggaaatttcaaaaaatagggcacattacatgatttttccggattacataatccgaacacctcctaaacaccctttttca 8032318  T
Q  489 aggtaaaa 496  Q
    ||| ||||    
T  8032319 agggaaaa 8032326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 478 - 613
Target Start/End: Original strand, 7884230 - 7884379
Alignment:
Q  478 actctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaat 563  Q
    ||||||||| |||||||||||||||  |||||||||||       ||||| ||||||||||||| |||||||||| |        ||||||||| |||||    
T  7884230 actcttttttaaggtaaaacagttcgaattatataatctgaactgtatcaacacaaattctaaatatgtttgtaatatgtattgtcattttagggacaat 7884329  T
Q  564 attaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||||||| ||||||||||| || ||||||||||||||||||| ||||    
T  7884330 attaatcttcctaactctcatccttctgttttgggtcattgttacatgtt 7884379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 397 - 606
Target Start/End: Original strand, 26095047 - 26095271
Alignment:
Q  397 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttc-aaggtaaa 495  Q
    ||||||||||||| |||||  |||||||||| |||||||||||  | ||| ||||||| |||||| | | ||||| ||||||||||||||| |||| |||    
T  26095047 gattttgtaatccaaaaaccacaaaaaatagagcgcgttacatatttttttcggattacataatccgaacaccccataaacactctttttcaaaggaaaa 26095146  T
Q  496 acagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactct 581  Q
    | |||||  |||||||||||       ||||| || |||||||||||||||||||||||        ||| ||| | ||||||||||||||| |||||||    
T  26095147 atagttcggattatataatctgaattgtatcaacataaattctaaacatgtttgtaacatggatagtcatattatggacaatattaatcttcttaactct 26095246  T
Q  582 catcattatgttttgggtcattgtt 606  Q
    |||  || | ||||| |||||||||    
T  26095247 cattcttctattttgtgtcattgtt 26095271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 439 - 607
Target Start/End: Original strand, 13908545 - 13908728
Alignment:
Q  439 tgatgtttccggattatataatctggaaaccccctaaacactctttttcaa-ggtaaaacagttcatattatataatcc------tatcagcacaaattc 531  Q
    |||| ||| ||||||||||||| || | ||| ||||||||||||||||||| || ||||||||||  ||||||||||||      ||||| || |||||     
T  13908545 tgattttttcggattatataatttgaacacctcctaaacactctttttcaagggaaaaacagttcggattatataatccgaattgtatcaacataaattt 13908644  T
Q  532 taaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    |||||||||||||||||        ||||||| | ||||||||||||||| ||||  ||||| || | ||||| ||||||||||    
T  13908645 taaacatgtttgtaacacggatagtcattttatggacaatattaatcttcttaaccttcatccttctcttttgagtcattgtta 13908728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 34529976 - 34530029
Alignment:
Q  389 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 442  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  34529976 ttttttcggattttgtaatccaaaaacctcaaaaaatagggcgtgttacatgat 34530029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 517 - 613
Target Start/End: Original strand, 14111949 - 14112051
Alignment:
Q  517 tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    |||||||||||||| |||| ||||||||||||        ||||||||| ||||||||||||||| ||||| ||||| |||  |||||||| ||||||||    
T  14111949 tatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatcctta--ttttgggttattgttac 14112046  T
Q  609 ttgtt 613  Q
    |||||    
T  14112047 ttgtt 14112051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 410
Target Start/End: Original strand, 28108308 - 28108350
Alignment:
Q  368 ggtgaaaaaatgagtaacgggtttttccggattttgtaatccg 410  Q
    ||||| |||||||||||||||||||||| ||||||||||||||    
T  28108308 ggtgagaaaatgagtaacgggtttttccagattttgtaatccg 28108350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 456
Target Start/End: Complemental strand, 11186341 - 11186282
Alignment:
Q  397 gattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattata 456  Q
    |||||| |||||||||||| ||||||||||||||||||| | || | ||| |||||||||    
T  11186341 gattttataatccgaaaacctcaaaaaatagggcgcgttccttgcttttttcggattata 11186282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 561 - 607
Target Start/End: Complemental strand, 26898790 - 26898744
Alignment:
Q  561 aatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    ||||||||||||| ||||||||||| || ||||||| ||||||||||    
T  26898790 aatattaatcttcctaactctcatccttctgttttgagtcattgtta 26898744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 433
Target Start/End: Complemental strand, 28445578 - 28445540
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcg 433  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  28445578 cggattttgtaatccgaaaatctcaaaaaatagggcgcg 28445540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 43388259 - 43388189
Alignment:
Q  372 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgat 442  Q
    ||||||||||| |||| || ||  ||||||||||||||| |||  | |||||||||||||| |||||||||    
T  43388259 aaaaaatgagttacggattcttttggattttgtaatccggaaatctaaaaaaatagggcgcattacatgat 43388189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 549 - 585
Target Start/End: Complemental strand, 8738984 - 8738948
Alignment:
Q  549 cattttaggaacaatattaatcttcgtaactctcatc 585  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  8738984 cattttaagaacaatattaatcttcctaactctcatc 8738948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 5e-70; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 50716215 - 50716477
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||| |||    
T  50716215 agggtgaaaaatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccgga 50716314  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    |||||||||||||| |||||||||||||||||| |||  |||||||||||       ||||||||||||||||||||||||||||||||        |||    
T  50716315 aaccccctaaacaccctttttcaaggtaaaacaattcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcat 50716414  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatg-ttttgggtcattgttacttgtt 613  Q
    |||||| ||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||    
T  50716415 tttagggacaatattaatcttcctaactctcatcattccgtttttgggtcattgttacttgtt 50716477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 50796632 - 50796370
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||| |||    
T  50796632 agggtgaaaaatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccgga 50796533  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    |||||||||||||| |||||||||||||||||| |||  |||||||||||       ||||||||||||||||||||||||||||||||        |||    
T  50796532 aaccccctaaacaccctttttcaaggtaaaacaattcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcat 50796433  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatg-ttttgggtcattgttacttgtt 613  Q
    |||||| ||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||    
T  50796432 tttagggacaatattaatcttcctaactctcatcattccgtttttgggtcattgttacttgtt 50796370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 3903002 - 3902741
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    ||||||||||   |||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||| |||||| |||    
T  3903002 agggtgaaaagtggagttactggtttttccggattttgtaatccgaaaacttcaaaaaatagagcgcgttacatgatgtttttggattacataatccgga 3902903  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||||      ||||||||||||||||||||||||||||||||        |||    
T  3902902 aaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatgatcat 3902803  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||| | ||||||||||||||| ||||||||||| || || |||||||||||||||| ||||    
T  3902802 tttatggacaatattaatcttcataactctcatccttctgctttgggtcattgttacatgtt 3902741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 363 - 608
Target Start/End: Complemental strand, 38977947 - 38977688
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||| |||||||| ||||||  |||||||||||||| ||||||||||||||||||||||||||||| |||||  |||||| ||||||     
T  38977947 taaagggtgaaaaaataagtaacggatttttctagattttgtaatccggaaacttcaaaaaatagggcgcgttacatggtgttttgggattacataatcc 38977848  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    | |||||||||||||||  |||||||||||||||||||||| ||||||||||||      |||||||||||||| |||||||||||||||||            
T  38977847 gaaaaccccctaaacaccttttttcaaggtaaaacagttcaaattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatggatagt 38977748  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    ||||||| | ||||||||||||||| ||||||||||| || |||||||||||||||||||    
T  38977747 cattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttac 38977688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 363 - 597
Target Start/End: Complemental strand, 47740131 - 47739883
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  47740131 taaagggtgaaaaaatgagcaacagatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 47740032  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||||||||||||| ||||||||||||||||  |||   |||||||||||       ||||||||||||||||||||||||||||||||            
T  47740031 ggaaaccccctaaacaccctttttcaaggtaaaattgttttgattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagt 47739932  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgg 597  Q
    ||||| ||| ||||||||||||||| ||||||||||| || ||||||||    
T  47739931 catttaagggacaatattaatcttcataactctcatccttctgttttgg 47739883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 372 - 608
Target Start/End: Complemental strand, 51540804 - 51540554
Alignment:
Q  372 aaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacccc 471  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||    
T  51540804 aaaaaatgagtaacggatttttctggattttggaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccgaattacataatccggaaacccc 51540705  T
Q  472 ctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaac--------acattttagg 557  Q
     |||||||  |||||||||||||||||||||  |||||||||||       |||||||||||||||||||||||||||||||         |||||||||    
T  51540704 ttaaacaccgtttttcaaggtaaaacagttcggattatataatctgaatagtatcagcacaaattctaaacatgtttgtaacttggatagtcattttagg 51540605  T
Q  558 aacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
     ||||||||||||||| ||||||||||| || |  ||||||||||||||||    
T  51540604 gacaatattaatcttcctaactctcatccttctcctttgggtcattgttac 51540554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 370 - 613
Target Start/End: Complemental strand, 46622977 - 46622730
Alignment:
Q  370 tgaaaaaatgagtaacgggtttttccggattttgtaat-ccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaac 468  Q
    |||||||||||||||||| |||||||||||||| |||  ||| ||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||    
T  46622977 tgaaaaaatgagtaacggatttttccggattttataaaaccggaaacttcaaaaaataggacacgttacatgatgtttccggattacataatctggaaac 46622878  T
Q  469 cccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaacacattttaggaacaa 562  Q
    |||||||||||  |||||||| ||||||||||||  ||||||||||||      |||||||||||||||||||||||   |  |  ||||||||| ||||    
T  46622877 cccctaaacaccatttttcaaagtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatg---gatagtcattttagggacaa 46622781  T
Q  563 tattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||||| | ||||||||  || ||||||||||||||||||||||||    
T  46622780 tattaatcttccttactctcattcttctgttttgggtcattgttacttgtt 46622730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 363 - 608
Target Start/End: Complemental strand, 3352266 - 3352006
Alignment:
Q  363 taaagggtgaaaaaa-tgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatc 461  Q
    ||||||||||||||| |||||||||  |||||||  ||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||| |||||     
T  3352266 taaagggtgaaaaaaatgagtaacgaatttttccaaattttgtaatcaggaaacttaaaaaaatagggtgcgttacatgatgtttccggattacataatt 3352167  T
Q  462 tggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca------- 548  Q
     ||||||||||||||||| |||| |||||||||||||||||  |||||||||||       ||||||||||||||||||||||||||||||||           
T  3352166 cggaaaccccctaaacaccctttatcaaggtaaaacagttcgaattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatag 3352067  T
Q  549 -cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
     ||||||||| ||||||||||||||| ||||||||||  || |||||||||||||||||||    
T  3352066 tcattttagggacaatattaatcttcctaactctcattcttctgttttgggtcattgttac 3352006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 363 - 607
Target Start/End: Original strand, 35142037 - 35142292
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||   ||||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||     
T  35142037 taaagggtgaaaaaa---gtaacggatttttccgggttttgtaatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattacataatcc 35142133  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatat------aatcctatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    |||||||||||||||||  ||||| |||||||||||||||  |||||||      |||  ||||||||||||||||||||||||||||||||            
T  35142134 ggaaaccccctaaacaccattttttaaggtaaaacagttcggattatataatatgaattgtatcagcacaaattctaaacatgtttgtaacatggatagt 35142233  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    |||||||   ||||||||||||||| ||||||||||| || || |||||||||||||||    
T  35142234 cattttaaagacaatattaatcttcctaactctcatccttctgctttgggtcattgtta 35142292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 363 - 613
Target Start/End: Original strand, 39149770 - 39150033
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||| || ||||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||  ||||||||||||| ||||||     
T  39149770 taaagggtgaaaaaattagcaacggatttttccggattttgtaatccagaaact-caaaaaatagggcgcgttacatagtgtttccggattacataatcc 39149868  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    |||||||||||||||||  |||||||||||||||||||||   ||||||||||      ||||||||||||||| |||||||||||||||||            
T  39149869 ggaaaccccctaaacaccatttttcaaggtaaaacagttcgggttatataatccgaactctatcagcacaaattttaaacatgtttgtaacattggtagt 39149968  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||  ||||||||||| ||| ||||||||||| || |||||||||||| |||||| ||||    
T  39149969 cattttagagacaatattaattttcctaactctcatccttctgttttgggtcactgttacatgtt 39150033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 367 - 599
Target Start/End: Original strand, 33438486 - 33438731
Alignment:
Q  367 gggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaa 466  Q
    |||||||||||| |||||||| |||||| | |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||    
T  33438486 gggtgaaaaaataagtaacggatttttctgaattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatg-ttccggattacataatgtggaa 33438584  T
Q  467 accccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------catt 552  Q
    |||| | ||||||  |||||||||||||||||||||  |||||||||||       |||||||||||||||||||||||||||||| |        ||||    
T  33438585 accctcaaaacaccatttttcaaggtaaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcatt 33438684  T
Q  553 ttaggaacaatattaatcttcgtaactctcatcattatgttttgggt 599  Q
    ||||| ||||||||||||||| ||||||||||| || ||||||||||    
T  33438685 ttagggacaatattaatcttcctaactctcatccttctgttttgggt 33438731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 388 - 613
Target Start/End: Complemental strand, 501315 - 501076
Alignment:
Q  388 gtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgg-aaaccccctaaacactcttttt 486  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||| || |||||||||||||||  |||||    
T  501315 gtttttccggattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtttccggattgcataatccggaaaaccccctaaacacctttttt 501216  T
Q  487 caaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatctt 572  Q
    ||||||||||||||||  ||||||||||||      ||| |||||||||||||||||||||||||| |        ||||||| | ||||||||||||||    
T  501215 caaggtaaaacagttc-gattatataatccgaactgtataagcacaaattctaaacatgtttgtaaaatggatagtcattttatggacaatattaatctt 501117  T
Q  573 cgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    | || |||||||| || ||||||||||||||||||| ||||    
T  501116 cctagctctcatccttctgttttgggtcattgttacatgtt 501076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 391 - 613
Target Start/End: Complemental strand, 34821514 - 34821278
Alignment:
Q  391 tttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaag 490  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||| |||||||||||||||||  |||||||||    
T  34821514 tttccgaattttgtaatccggaaacttcaaaaaatagagcgcgttacatgatgttttcggattacataatccggaaaccccctaaacaccatttttcaag 34821415  T
Q  491 gtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgta 576  Q
    |||||| |||||  |||||||||||       ||||||||||||||||||||||||||||||||        ||||||| | ||||||||||||||| ||    
T  34821414 gtaaaatagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttatggacaatattaatcttccta 34821315  T
Q  577 actctcatcattatgttttgggtcattgttacttgtt 613  Q
    | | ||||| || ||||||||||||||||||| ||||    
T  34821314 aatttcatccttctgttttgggtcattgttacctgtt 34821278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 366 - 606
Target Start/End: Complemental strand, 2358819 - 2358564
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaa-tagggcgcgttacatgatgtttccggattatataatctgg 464  Q
    |||||||||||  |||| |||| |||| | ||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||| |||||| ||    
T  2358819 agggtgaaaaatggagttacggattttcctggattttgtaatccggaaacttcaaaaaaatagggcgtgttacatgatgtttccggcttacataatccgg 2358720  T
Q  465 aaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------ca 550  Q
    |||||| | |||||| |||||| ||||||||| |||||  ||||||||||||      |||||||| |||| |||||||| |||||||||        ||    
T  2358719 aaaccctccaaacacccttttttaaggtaaaatagttcggattatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagcca 2358620  T
Q  551 ttttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtt 606  Q
    ||||||| ||||||||||||||| ||||||| ||| || |||||||||||||||||    
T  2358619 ttttagggacaatattaatcttcctaactcttatccttttgttttgggtcattgtt 2358564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 47301982 - 47302242
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| | || |||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| |||||| | |    
T  47301982 agggtgaaaaatggagttatggatttttccggattttgtaatccggaaacttaaaaaaataaggcgcgttacatgatgtttccggattacataatccgaa 47302081  T
Q  466 aaccccctaaacactc-tttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------ca 550  Q
    |||| ||||||||| | ||||| ||||||||| |||||  ||||||||||||      ||||||||||||| |||||||| |||||||||        ||    
T  47302082 aacctcctaaacaccctttttttaaggtaaaatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagcca 47302181  T
Q  551 ttttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||| ||||||||||| ||| ||||||| ||| || ||||||||||||||||||| ||||    
T  47302182 ttttagg-acaatattaatattc-taactcttatccttttgttttgggtcattgttacatgtt 47302242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 395 - 613
Target Start/End: Original strand, 52777223 - 52777455
Alignment:
Q  395 cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactc-tttttcaaggta 493  Q
    |||||||||||||||| |||||||||||| ||| || | ||||||||||||||||||||| |||||  ||||||||||||||||| | ||||||||||||    
T  52777223 cggattttgtaatccggaaacttcaaaaa-tagagcactttacatgatgtttccggattacataataaggaaaccccctaaacacccttttttcaaggta 52777321  T
Q  494 aaacagttcatattatataat------cctatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaact 579  Q
    |||||||||  ||||||||||        ||||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||| |||||    
T  52777322 aaacagttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgtaacatgtatagccattttagggacaatattaatcttcttaact 52777421  T
Q  580 ctcatcattatgttttgggtcattgttacttgtt 613  Q
    || ||| || ||||||||||||||| ||| ||||    
T  52777422 cttatccttttgttttgggtcattgctacatgtt 52777455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 363 - 613
Target Start/End: Original strand, 51258363 - 51258628
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||  ||| |||||||||||||||||||||||| || ||| ||||||| ||||||     
T  51258363 taaagggtgaaaaa-tgagttacggatttttccggattttgtaatccataaatttcaaaaaatagggcgcgttacataattttttcggattacataatcc 51258461  T
Q  463 ggaaaccccctaaacactctttttcaa-ggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca------- 548  Q
    | | |||||||||||||  |||||||| || |||||| ||   ||||||||||||      |||||||||||||| ||||||||||| |||||           
T  51258462 gaacaccccctaaacaccatttttcaagggaaaaacaatttgaattatataatccgaactgtatcagcacaaattttaaacatgtttataacatggatag 51258561  T
Q  549 -catttta-ggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
     ||||||| |||||||||||||||||| ||||||||||| || ||||||| ||||||||||| ||||    
T  51258562 tcattttagggaacaatattaatcttcataactctcatccttttgttttgagtcattgttacatgtt 51258628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 28872966 - 28873230
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||   ||| ||| ||||||| ||||||| ||||||||||| ||||||||||||| |||||||||| |||||||||||||| ||||||        
T  28872966 agggtgaaaaatgaagttacgagtttttctggattttataatccgaaaatttcaaaaaataggacgcgttacattatgtttccggattacataatccaac 28873065  T
Q  466 aaccccctaaaca--ctctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca--------c 549  Q
    |||||||||||||  || ||||| |||||||||||||||  |||||||||||       ||||||||||||||||||||||||||||||||        |    
T  28873066 aaccccctaaacacccttttttttaaggtaaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtc 28873165  T
Q  550 attttaggaacaatattaatcttcgtaactctcatcattatg-ttttgggtcattgttacttgtt 613  Q
    |||||||| ||||||||||||||| ||||||||||  ||  | |||||||||| |||||||||||    
T  28873166 attttagggacaatattaatcttcttaactctcattcttccgcttttgggtcactgttacttgtt 28873230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 397 - 604
Target Start/End: Complemental strand, 30721974 - 30721754
Alignment:
Q  397 gattttgtaatccgaaaacttcaaaaaatagggcgcg---ttacatgatgtttccggattatataatctggaaac-cccctaaacactctttttcaaggt 492  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||| ||| ||||||| |||||| | | || |||||||||||  ||||||||||     
T  30721974 gattttgtaatccgaaaacttcaaaaaatagggcgcaatattacatgattttttcggattacataatccgaacactcccctaaacaccatttttcaaggg 30721875  T
Q  493 aaaac-agttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaacac--attttaggaacaatattaatcttcgtaactctca 583  Q
    ||||  |||||| ||||||||||||      ||||||||||||||||||||||||||||||| |  |||||||| ||||||||||||||| ||||||| |    
T  30721874 aaaaatagttcagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaactctcattttagggacaatattaatcttcctaactctta 30721775  T
Q  584 tcattatgttttgggtcattg 604  Q
    || || |||||||||||||||    
T  30721774 tccttctgttttgggtcattg 30721754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 413 - 607
Target Start/End: Complemental strand, 43473118 - 43472910
Alignment:
Q  413 aacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatata 512  Q
    |||||||||||||| || || ||||||||||||||||||||| |||||| |||||||||||||||||  ||||| ||||||||| |||||  ||||||||    
T  43473118 aacttcaaaaaatatggtgcattacatgatgtttccggattacataatccggaaaccccctaaacaccattttttaaggtaaaatagttcgaattatata 43473019  T
Q  513 atcc------tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttggg 598  Q
    ||||      ||||||||||||| |||||||| |||||||||        ||||||| | ||||||||||||||| ||||||| ||| || |||||||||    
T  43473018 atccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatattaatcttcctaactcttatccttttgttttggg 43472919  T
Q  599 tcattgtta 607  Q
    |||||||||    
T  43472918 tcattgtta 43472910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 363 - 468
Target Start/End: Complemental strand, 34821595 - 34821490
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| | |||||     
T  34821595 taaagggtgaaaaaatgagtaacggaattttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacctgatgtttccgaattttgtaatcc 34821496  T
Q  463 ggaaac 468  Q
    ||||||    
T  34821495 ggaaac 34821490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 49096425 - 49096161
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||| | ||| |||| |||||||||||||||||||||| |||  |||||||||| |||  |||||||||| ||| || |||| ||||||     
T  49096425 taaagggtgaaaaa-taagttacggatttttccggattttgtaatccggaaatctcaaaaaatatggcatgttacatgattttttcgaattacataatcc 49096327  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
      | ||||||||||||  ||||||||||| |||||||||   |||||||||||       |||||||||||||| |||||||||||||||||            
T  49096326 aaacaccccctaaacagcctttttcaaggaaaaacagtttgaattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatagatagt 49096227  T
Q  549 catttta-ggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||| |||||||||| ||||||| ||||||||||| || ||||||| ||||||||||| ||||    
T  49096226 cattttagggaacaatataaatcttcctaactctcatccttctgttttgagtcattgttacctgtt 49096161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 47123066 - 47123135
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgc 432  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  47123066 taaagggtgaaaaaatgagtaacgggtttttccgaattttgtaatccggaaacttcaaaaaatagggcgc 47123135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 47130432 - 47130501
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgc 432  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  47130432 taaagggtgaaaaaatgagtaacgggtttttccgaattttgtaatccggaaacttcaaaaaatagggcgc 47130501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 370 - 548
Target Start/End: Original strand, 3937355 - 3937530
Alignment:
Q  370 tgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacc 469  Q
    |||||||  |||| ||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||| | ||        
T  3937355 tgaaaaatggagttacgagtttttccgaattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataat-tcga---- 3937449  T
Q  470 ccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca 548  Q
        |||||| |||||| ||||||||| |||||  ||||||||||||      ||||||||||||| |||||||| |||||||||    
T  3937450 ----aaacacccttttttaaggtaaaatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaaca 3937530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 363 - 479
Target Start/End: Original strand, 48303951 - 48304067
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| |||  ||||||||||||| | |||||||||| ||| | ||||| ||||||     
T  48303951 taaagggtgaaaaaatgagttacggatttttccggattttgtaatccggaaatctcaaaaaatagggtgtgttacatgattttttcagattacataatcc 48304050  T
Q  463 ggaaaccccctaaacac 479  Q
    | ||||||||| |||||    
T  48304051 gaaaaccccctcaacac 48304067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 370 - 469
Target Start/End: Original strand, 45244356 - 45244455
Alignment:
Q  370 tgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaacc 469  Q
    ||||||||||||| | || ||||||||||||||||||| ||||||  |||||||||||||||||||||||||| ||| ||||||| |||||||| |||||    
T  45244356 tgaaaaaatgagttatggatttttccggattttgtaattcgaaaatctcaaaaaatagggcgcgttacatgattttttcggattacataatctgaaaacc 45244455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 517 - 613
Target Start/End: Original strand, 47123146 - 47123250
Alignment:
Q  517 tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    ||||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||| ||||||||||| || ||||||||| |||||||||    
T  47123146 tatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttctgttttgggccattgttac 47123245  T
Q  609 ttgtt 613  Q
     ||||    
T  47123246 ctgtt 47123250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 517 - 613
Target Start/End: Original strand, 47130512 - 47130616
Alignment:
Q  517 tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttac 608  Q
    ||||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||| ||||||||||| || ||||||||| |||||||||    
T  47130512 tatcagcacaaattctaaacatgtttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatccttctgttttgggccattgttac 47130611  T
Q  609 ttgtt 613  Q
     ||||    
T  47130612 ctgtt 47130616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 389 - 439
Target Start/End: Original strand, 42936686 - 42936736
Alignment:
Q  389 tttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacat 439  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  42936686 tttttccggattttgtaatccgaaaacttcaaaaaatagggtgcgctacat 42936736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 467 - 548
Target Start/End: Complemental strand, 27143511 - 27143424
Alignment:
Q  467 accccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca 548  Q
    |||| |||||||| ||||||||||| ||||||||||| |||||||||||       |||||||||||||||| |||||||||||||||    
T  27143511 accctctaaacaccctttttcaaggaaaaacagttcaaattatataatctgatctgtatcagcacaaattctgaacatgtttgtaaca 27143424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 517 - 607
Target Start/End: Original strand, 29035919 - 29036017
Alignment:
Q  517 tatcagcacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    ||||| |||||||||||| |||||||||||||        ||||||| | || |||||| ||||| ||||||||||||||||||||| |||||||||||    
T  29035919 tatcaacacaaattctaagcatgtttgtaacatggataatcattttaaggaccatattactcttcctaactctcatcattatgttttaggtcattgtta 29036017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 550 - 607
Target Start/End: Original strand, 51492960 - 51493017
Alignment:
Q  550 attttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    |||||| | ||||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  51492960 attttatggacaatattaatcttcctaactctcatccttatgtttttggtcattgtta 51493017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 479
Target Start/End: Original strand, 32024985 - 32025059
Alignment:
Q  405 aatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccctaaacac 479  Q
    ||||||||||  ||||||||||||||||  || ||||| ||| ||||||||| |||||| | |||||||||||||    
T  32024985 aatccgaaaatctcaaaaaatagggcgcactatatgattttttcggattatagaatctgaacaccccctaaacac 32025059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 444 - 613
Target Start/End: Complemental strand, 5128017 - 5127834
Alignment:
Q  444 tttccggattatataatctggaaaccccctaaacactctttttcaaggtaaaa-cagttcatattatataatcc------tatcagcacaaattctaaac 536  Q
    |||||||||||||||||| | | ||| | ||||||||  ||||||||| |||| |||||||  ||||||||||       |||||||| ||||| |||||    
T  5128017 tttccggattatataatccgaacacctc-taaacacttattttcaagggaaaaacagttcagtttatataatctgaattgtatcagcataaattttaaac 5127919  T
Q  537 atgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||||||        ||||||| | ||||||||||||||| || ||||||||  | ||||||| |||||||||| |||||    
T  5127918 atgtttgtaacatggatatccattttatggacaatattaatcttcatagctctcatccatttgttttgcgtcattgttagttgtt 5127834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 448 - 607
Target Start/End: Original strand, 29048387 - 29048560
Alignment:
Q  448 cggattatataatctggaaaccccctaaacactctttttcaaggtaaaa-cagttcatattatataatcc------tatcagcacaaattctaaacatgt 540  Q
    ||||||||| |||| | | ||||||||||||  ||||||||||| |||| || |||| |||||||||||       ||||| |||||||||| || ||||    
T  29048387 cggattatagaatccgaacaccccctaaacatcctttttcaagggaaaaacaattcagattatataatcggaactatatcaacacaaattctgaatatgt 29048486  T
Q  541 ttgtaacac-------attttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtta 607  Q
    ||||||||        |||||| | | ||||||||||||| ||||||| ||| ||||||||| |||||||||||    
T  29048487 ttgtaacatgacagttattttaaggataatattaatcttcataactcttatccttatgttttaggtcattgtta 29048560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 561 - 613
Target Start/End: Original strand, 46624892 - 46624944
Alignment:
Q  561 aatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||||||| ||||||||||| || |||||||||||||| ||| |||||    
T  46624892 aatattaatcttcctaactctcatccttctgttttgggtcattattagttgtt 46624944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 562 - 613
Target Start/End: Original strand, 26464999 - 26465050
Alignment:
Q  562 atattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||||||||| ||||||||||  ||||||||| ||||||||||| |||||    
T  26464999 atattaatcttcttaactctcattcttatgttttaggtcattgttagttgtt 26465050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 424
Target Start/End: Original strand, 33700775 - 33700810
Alignment:
Q  389 tttttccggattttgtaatccgaaaacttcaaaaaa 424  Q
    ||||||| ||||||||||||||||||||||||||||    
T  33700775 tttttccagattttgtaatccgaaaacttcaaaaaa 33700810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 564 - 613
Target Start/End: Original strand, 3938357 - 3938406
Alignment:
Q  564 attaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||||||||| ||||||| ||| || ||||||||||||||||||| ||||    
T  3938357 attaatcttcctaactcttatccttttgttttgggtcattgttacctgtt 3938406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 489
Target Start/End: Complemental strand, 47980125 - 47980080
Alignment:
Q  444 tttccggattatataatctggaaaccccctaaacactctttttcaa 489  Q
    ||||||||||||| |||||| | |||||||||||||| ||||||||    
T  47980125 tttccggattatagaatctgaacaccccctaaacactttttttcaa 47980080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 128; Significance: 7e-66; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 363 - 613
Target Start/End: Complemental strand, 3596 - 3330
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttc--cggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataat 460  Q
    ||||||||||||||||||||||||  |||||   || |||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3596 taaagggtgaaaaaatgagtaacgaattttttttcgaattttgtaatctagaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataat 3497  T
Q  461 ctggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatc------ctatcagcacaaattctaaacatgtttgtaaca------ 548  Q
    | ||||||||| ||||||| ||||||||||||||||||||||  |||||||||||       |||| || ||||||||||||||||||||||||          
T  3496 ccggaaaccccataaacaccctttttcaaggtaaaacagttcggattatataatctgaactgtatcggcgcaaattctaaacatgtttgtaacatcgata 3397  T
Q  549 --cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
      ||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  3396 atcattttagggacaatattaatcttcgtaactctcatccttctgttttgggtcattgttacttgtt 3330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 122; Significance: 3e-62; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 363 - 606
Target Start/End: Complemental strand, 142161 - 141906
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatct 462  Q
    |||||||||||||| || ||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  142161 taaagggtgaaaaa-tgtgtaacagatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatcc 142063  T
Q  463 ggaaaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca-------- 548  Q
    ||||||||||||||||| ||||||||||||||||  ||| | ||||||||||||      ||||||||||||||||||||||||||||||||            
T  142062 ggaaaccccctaaacaccctttttcaaggtaaaattgttgagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 141963  T
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgtt 606  Q
    ||||||||| ||||||||||||||| |||||| |||| || || ||||||||||||||    
T  141962 cattttagggacaatattaatcttcctaactcccatccttctg-tttgggtcattgtt 141906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 366 - 613
Target Start/End: Complemental strand, 9693 - 9432
Alignment:
Q  366 agggtgaaaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctgga 465  Q
    |||||||||||  |||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||| | |    
T  9693 agggtgaaaaatagagttacgggtttttccgaattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccgaa 9594  T
Q  466 aaccccctaaacactctttttcaaggtaaaacagttcatattatataatcc------tatcagcacaaattctaaacatgtttgtaaca--------cat 551  Q
    |||||||| ||||| ||||||||| ||||||||||||  ||||||||||||      |||||||| |||||||| ||||||||||||||        |||    
T  9593 aaccccctgaacaccctttttcaaagtaaaacagttcggattatataatccgaactgtatcagcataaattctatacatgtttgtaacatggatagtcat 9494  T
Q  552 tttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    |||| | ||||||||||| ||  ||||| |||||||| ||||||||||||||||||| ||||    
T  9493 tttatggacaatattaatatttataactttcatcattctgttttgggtcattgttacatgtt 9432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 373 - 501
Target Start/End: Original strand, 23092 - 23220
Alignment:
Q  373 aaaaatgagtaacgggtttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataatctggaaaccccc 472  Q
    ||||||||||||||| |||||||| ||||| ||||||| |||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||    
T  23092 aaaaatgagtaacggatttttccgaattttataatccggaaacttcaaaaaatagggtgcattacatgatgtttccggattatataatccggaaaccccc 23191  T
Q  473 taaacactctttttcaaggtaaaacagtt 501  Q
    |||||||  ||||||||  ||||||||||    
T  23192 taaacaccttttttcaaaataaaacagtt 23220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 585
Target Start/End: Original strand, 23228 - 23298
Alignment:
Q  523 cacaaattctaaacatgtttgtaaca--------cattttaggaacaatattaatcttcgtaactctcatc 585  Q
    ||||||||| ||||||||||||||||        ||||||||| ||||||||||||||| |||||||||||    
T  23228 cacaaattcgaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 23298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 549 - 613
Target Start/End: Original strand, 140645 - 140709
Alignment:
Q  549 cattttaggaacaatattaatcttcgtaactctcatcattatgttttgggtcattgttacttgtt 613  Q
    ||||||||| ||||||||||||||| ||||||||||| || |||||| |||||||||||||||||    
T  140645 cattttagggacaatattaatcttcctaactctcatccttttgttttaggtcattgttacttgtt 140709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 407
Target Start/End: Original strand, 140568 - 140612
Alignment:
Q  363 taaagggtgaaaaaatgagtaacgggtttttccggattttgtaat 407  Q
    |||| ||||||||||||||||| || |||||||||||||||||||    
T  140568 taaaaggtgaaaaaatgagtaaaggatttttccggattttgtaat 140612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 170779 - 170686
Alignment:
Q  121 aacaagtcccacatcgagtatacgttaaaacagcactgaagtttt---tataaaataagagtgtgtatcacttagtaactcatagttggggacc 211  Q
    |||||||||||||||||||||| |||||||||     |||| |||   |||||||||||||||||||||||||| |||| ||||||||||||||    
T  170779 aacaagtcccacatcgagtatatgttaaaacatagaagaaggtttacctataaaataagagtgtgtatcacttattaacccatagttggggacc 170686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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