View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13763_high_52 (Length: 487)

Name: NF13763_high_52
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13763_high_52
NF13763_high_52
[»] chr3 (26 HSPs)
chr3 (18-485)||(31646892-31647357)
chr3 (383-487)||(44570440-44570544)
chr3 (383-485)||(12050989-12051091)
chr3 (385-485)||(46317440-46317539)
chr3 (406-487)||(36730207-36730288)
chr3 (407-487)||(37509086-37509166)
chr3 (389-487)||(51817366-51817464)
chr3 (383-483)||(10854810-10854910)
chr3 (383-483)||(32415521-32415620)
chr3 (408-487)||(8715555-8715634)
chr3 (408-487)||(9067442-9067521)
chr3 (418-485)||(44695727-44695794)
chr3 (393-487)||(8847506-8847600)
chr3 (389-483)||(29915633-29915727)
chr3 (389-483)||(29964786-29964880)
chr3 (383-444)||(13350806-13350867)
chr3 (406-487)||(35306306-35306387)
chr3 (413-487)||(4759904-4759978)
chr3 (383-487)||(52570734-52570837)
chr3 (383-483)||(41345926-41346026)
chr3 (424-487)||(34060820-34060883)
chr3 (424-485)||(12905338-12905399)
chr3 (407-487)||(20227434-20227514)
chr3 (423-487)||(45899598-45899662)
chr3 (447-487)||(18841-18881)
chr3 (447-487)||(18982-19022)
[»] chr5 (24 HSPs)
chr5 (18-271)||(5961719-5961982)
chr5 (383-485)||(39567854-39567956)
chr5 (376-487)||(35653309-35653420)
chr5 (383-487)||(25017345-25017449)
chr5 (383-487)||(3639129-3639232)
chr5 (378-487)||(12914121-12914230)
chr5 (407-487)||(338818-338899)
chr5 (406-487)||(4422018-4422099)
chr5 (406-485)||(39692984-39693063)
chr5 (383-476)||(16315597-16315690)
chr5 (383-487)||(27823212-27823314)
chr5 (383-485)||(5151440-5151542)
chr5 (411-483)||(28143181-28143253)
chr5 (383-487)||(34546729-34546833)
chr5 (437-487)||(37243852-37243902)
chr5 (406-487)||(13951290-13951371)
chr5 (420-485)||(43414120-43414185)
chr5 (383-485)||(8410093-8410195)
chr5 (433-487)||(25568346-25568400)
chr5 (406-480)||(39042096-39042170)
chr5 (406-487)||(4962570-4962651)
chr5 (435-487)||(5058748-5058800)
chr5 (407-487)||(12068228-12068307)
chr5 (408-479)||(15915014-15915083)
[»] chr2 (30 HSPs)
chr2 (383-487)||(39085846-39085950)
chr2 (385-485)||(6999155-6999255)
chr2 (406-487)||(27495097-27495178)
chr2 (410-487)||(15004905-15004982)
chr2 (406-487)||(41436452-41436533)
chr2 (383-487)||(9201549-9201652)
chr2 (383-483)||(1321118-1321219)
chr2 (383-487)||(2966491-2966595)
chr2 (406-487)||(862563-862644)
chr2 (406-487)||(23685706-23685787)
chr2 (433-485)||(13997960-13998012)
chr2 (407-483)||(33726355-33726431)
chr2 (409-487)||(35445344-35445423)
chr2 (406-480)||(39401595-39401669)
chr2 (406-487)||(17056111-17056192)
chr2 (406-487)||(17068558-17068639)
chr2 (406-487)||(17095120-17095201)
chr2 (407-487)||(44299735-44299815)
chr2 (433-487)||(765204-765258)
chr2 (406-480)||(11659236-11659310)
chr2 (407-485)||(17118429-17118506)
chr2 (383-485)||(44173071-44173172)
chr2 (404-481)||(11445379-11445456)
chr2 (406-487)||(17074541-17074622)
chr2 (232-269)||(22587830-22587867)
chr2 (433-485)||(17603812-17603864)
chr2 (406-485)||(16361540-16361619)
chr2 (407-485)||(464770-464848)
chr2 (422-487)||(3454752-3454816)
chr2 (407-483)||(33864331-33864406)
[»] chr7 (28 HSPs)
chr7 (383-485)||(1910195-1910297)
chr7 (377-487)||(7323007-7323117)
chr7 (383-487)||(10575813-10575917)
chr7 (377-487)||(29687421-29687531)
chr7 (410-487)||(27053547-27053624)
chr7 (408-485)||(30388716-30388793)
chr7 (377-487)||(8258692-8258802)
chr7 (385-483)||(8292698-8292796)
chr7 (378-487)||(5240386-5240495)
chr7 (406-487)||(8380415-8380496)
chr7 (407-487)||(22521561-22521641)
chr7 (407-486)||(41188841-41188920)
chr7 (410-484)||(24359765-24359839)
chr7 (401-487)||(29034656-29034742)
chr7 (375-487)||(36279068-36279174)
chr7 (413-487)||(40194807-40194881)
chr7 (407-485)||(46478611-46478689)
chr7 (385-487)||(49069508-49069610)
chr7 (406-487)||(42222195-42222276)
chr7 (383-487)||(3681646-3681749)
chr7 (435-487)||(31626095-31626147)
chr7 (424-487)||(40763241-40763304)
chr7 (424-487)||(43567560-43567623)
chr7 (413-487)||(5348026-5348097)
chr7 (423-485)||(30538536-30538595)
chr7 (411-485)||(40066973-40067045)
chr7 (412-485)||(6548510-6548583)
chr7 (422-487)||(18800202-18800267)
[»] chr6 (15 HSPs)
chr6 (383-487)||(26572131-26572235)
chr6 (383-487)||(7875235-7875339)
chr6 (406-485)||(5578248-5578327)
chr6 (383-481)||(16437642-16437740)
chr6 (383-487)||(10855384-10855487)
chr6 (406-487)||(12191467-12191548)
chr6 (383-487)||(7880481-7880585)
chr6 (385-487)||(6507443-6507545)
chr6 (433-487)||(6866916-6866970)
chr6 (406-487)||(7274268-7274349)
chr6 (407-480)||(34780039-34780112)
chr6 (394-485)||(8324160-8324251)
chr6 (406-473)||(32786043-32786110)
chr6 (383-480)||(12226392-12226489)
chr6 (376-416)||(8825031-8825071)
[»] chr4 (36 HSPs)
chr4 (383-487)||(30475376-30475480)
chr4 (378-485)||(54339059-54339166)
chr4 (390-484)||(9693528-9693622)
chr4 (383-487)||(23765529-23765633)
chr4 (383-487)||(45688694-45688798)
chr4 (383-487)||(47188719-47188823)
chr4 (408-487)||(31754914-31754993)
chr4 (384-485)||(41956269-41956370)
chr4 (383-487)||(26040414-26040518)
chr4 (383-487)||(26831840-26831943)
chr4 (387-487)||(2362584-2362686)
chr4 (407-486)||(19328983-19329062)
chr4 (408-487)||(20811239-20811318)
chr4 (383-481)||(34316783-34316881)
chr4 (406-487)||(51266898-51266979)
chr4 (383-487)||(34016577-34016680)
chr4 (407-485)||(35808452-35808530)
chr4 (406-487)||(31168108-31168189)
chr4 (394-487)||(33951662-33951755)
chr4 (374-487)||(50514667-50514780)
chr4 (393-485)||(55669700-55669792)
chr4 (408-487)||(32131118-32131197)
chr4 (385-487)||(35675244-35675346)
chr4 (377-480)||(15986211-15986314)
chr4 (401-480)||(51018440-51018519)
chr4 (383-480)||(23690980-23691076)
chr4 (407-483)||(10100171-10100247)
chr4 (403-479)||(39158388-39158464)
chr4 (423-483)||(40436072-40436132)
chr4 (407-483)||(53567011-53567087)
chr4 (385-480)||(20456522-20456617)
chr4 (422-487)||(3769803-3769868)
chr4 (383-487)||(45088025-45088122)
chr4 (413-485)||(1457591-1457663)
chr4 (423-480)||(30617940-30617997)
chr4 (412-480)||(966562-966630)
[»] chr1 (34 HSPs)
chr1 (383-487)||(22346288-22346392)
chr1 (383-485)||(27209774-27209876)
chr1 (383-487)||(43433726-43433830)
chr1 (383-487)||(49508784-49508888)
chr1 (406-485)||(41147531-41147610)
chr1 (383-486)||(47895285-47895388)
chr1 (406-485)||(6170604-6170683)
chr1 (418-487)||(50295484-50295554)
chr1 (410-487)||(28277533-28277610)
chr1 (383-487)||(7190526-7190630)
chr1 (410-487)||(34874545-34874622)
chr1 (406-485)||(45721729-45721805)
chr1 (383-487)||(4940791-4940895)
chr1 (419-487)||(28850961-28851028)
chr1 (413-485)||(33929947-33930019)
chr1 (378-478)||(43168087-43168187)
chr1 (406-485)||(11385955-11386034)
chr1 (418-485)||(47655424-47655491)
chr1 (410-459)||(29966800-29966849)
chr1 (434-487)||(40845253-40845306)
chr1 (424-485)||(42607377-42607438)
chr1 (408-485)||(50154449-50154526)
chr1 (406-487)||(52396417-52396498)
chr1 (407-487)||(2125758-2125838)
chr1 (406-486)||(24140747-24140827)
chr1 (413-485)||(26469635-26469707)
chr1 (376-480)||(44359730-44359834)
chr1 (377-480)||(14331782-14331885)
chr1 (419-485)||(44286859-44286925)
chr1 (408-483)||(932212-932287)
chr1 (436-487)||(4656020-4656071)
chr1 (425-487)||(30222613-30222676)
chr1 (412-487)||(49901906-49901981)
chr1 (433-487)||(31975488-31975542)
[»] chr8 (19 HSPs)
chr8 (387-483)||(6433499-6433595)
chr8 (377-485)||(4989881-4989986)
chr8 (401-487)||(10694776-10694862)
chr8 (410-487)||(19389364-19389441)
chr8 (406-487)||(37433240-37433320)
chr8 (406-487)||(8018734-8018816)
chr8 (413-487)||(21016111-21016185)
chr8 (433-487)||(25249395-25249449)
chr8 (420-485)||(33741530-33741595)
chr8 (418-487)||(34713975-34714044)
chr8 (424-487)||(26195427-26195490)
chr8 (433-487)||(6939159-6939213)
chr8 (423-485)||(45337995-45338057)
chr8 (383-484)||(26672741-26672842)
chr8 (383-459)||(3174407-3174483)
chr8 (423-487)||(18068953-18069017)
chr8 (406-485)||(26892760-26892839)
chr8 (407-454)||(44874308-44874355)
chr8 (388-480)||(38869960-38870052)
[»] scaffold0062 (3 HSPs)
scaffold0062 (406-485)||(16827-16906)
scaffold0062 (406-485)||(26995-27074)
scaffold0062 (406-485)||(37161-37240)
[»] scaffold0809 (1 HSPs)
scaffold0809 (419-482)||(4705-4768)
[»] scaffold0002 (1 HSPs)
scaffold0002 (424-487)||(392186-392249)


Alignment Details
Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 18 - 485
Target Start/End: Original strand, 31646892 - 31647357
Alignment:
Q  18 ctcataagaagagaggaaggggcgaaaagaaccaactaaaaacaacagggcatcgccacagcaggaaataaactccctaacagcaagcagccaaaaaaca 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31646892 ctcataagaagagaggaaggggcgaaaagaaccaactaaaaacaacagggcatcgccacaacaggaaataaactccctaacagcaagcagccaaaaaaca 31646991  T
Q  118 gcacctgatacagaagcaacaacaactgcataca-gaaataacataaggg--nnnnnnnnccagcaataaactaaaccaactaaaggcaaaaataatgat 214  Q
    ||||||||||||||||||||||||||| ||||||  |||||||| |||||          ||||||| |||||||||||||| ||||| |||  ||||||    
T  31646992 gcacctgatacagaagcaacaacaactacatacataaaataacacaagggaaaaaaaaaaccagcaacaaactaaaccaactgaaggctaaaccaatgat 31647091  T
Q  215 tgttccaatatatgatgaatttgtgctcctacccttctttgcatcacatgttgttaannnnnnnnnggttggattgggattggaatttgtgctcctaccc 314  Q
    |||| |||| |||||||||||||||||| |||| |||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||    
T  31647092 tgtttcaatttatgatgaatttgtgctcgtacctttctttgcatcacatgttgttaa---ttttttggttggattgggattggaatttgtgctcctaccc 31647188  T
Q  315 ttctctaaacaannnnnnnnacgaaggactaagttatattaggacggagcgagtaatattcttatggctcttgctaaccattgccttcagagcaatggtt 414  Q
    ||||||||||||        |||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||||    
T  31647189 ttctctaaacaa-tttttttacgaaggactcagttatattaggacggagcgagtaatatttttatgggtcttgctaaccattgtc-tcagagcaatggtt 31647286  T
Q  415 aaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    || |||| ||||||||| ||||||||||||||||||| || ||||  | ||||||||||||||||||||||    
T  31647287 aaggaagccaaaagtagcatgtttgcattgatttcaataacattttgacttttaaaaagttaaatttatca 31647357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 44570544 - 44570440
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||||| || | ||||||||||| |||| ||||||||| |||||||||||||||||||||| ||||  | ||||||||||||||| |||    
T  44570544 tcttgctaaccattgccctctgggcaatggttaaggaagccaaaagtagcatgtttgcattgatttcaacaacattttgacttttaaaaagttaaagtta 44570445  T
Q  483 tcact 487  Q
    |||||    
T  44570444 tcact 44570440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 383 - 485
Target Start/End: Original strand, 12050989 - 12051091
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    |||||||||| ||| || |||| ||||||||||| |||| ||||||||| |||||||||||| ||||||||| ||||  |||||||||||||||||||||    
T  12050989 tcttgctaactattaccctcagggcaatggttaaggaagccaaaagtagcatgtttgcattgttttcaacaacattttaatttttaaaaagttaaattta 12051088  T
Q  483 tca 485  Q
    |||    
T  12051089 tca 12051091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 385 - 485
Target Start/End: Original strand, 46317440 - 46317539
Alignment:
Q  385 ttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatc 484  Q
    ||||||||||||||| ||||| |||||||||| |||| ||||||||  |||||||||||| ||||||||| ||||  | |||||||||||||||||||||    
T  46317440 ttgctaaccattgccctcaga-caatggttaaggaagccaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatc 46317538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 36730288 - 36730207
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||||||| ||||  | ||||||||||||||||||||||||    
T  36730288 gcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcact 36730207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 407 - 487
Target Start/End: Original strand, 37509086 - 37509166
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||| |||||||||||||  || ||||||||| ||||||||||||||  | ||||||||||||||||||||||||    
T  37509086 caatggttaaggaagtcaaaagtaacatatttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcact 37509166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 487
Target Start/End: Complemental strand, 51817464 - 51817366
Alignment:
Q  389 taaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||| || | || ||||||||||| |||| ||||||||| ||||||| |||  ||||||||||||||  | ||||||||||||||||||||||||    
T  51817464 taaccattaccctgagggcaatggttaaggaagccaaaagtagcatgtttgtattagtttcaacaatattttgacttttaaaaagttaaatttatcact 51817366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 483
Target Start/End: Original strand, 10854810 - 10854910
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||||| ||    ||||| |||| |||| ||||||||| |||||||||||| ||||||||| ||||  | |||||||||||||||||||    
T  10854810 tcttgctaaccattgccctcgtgacaatgattaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaattta 10854909  T
Q  483 t 483  Q
    |    
T  10854910 t 10854910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 483
Target Start/End: Original strand, 32415521 - 32415620
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    |||||||||| |||||| |||| ||||||||||| |||  ||||||||  |||||||||||| ||||||||| ||||  | |||||||||||||||||||    
T  32415521 tcttgctaactattgccctcag-gcaatggttaaggaaaccaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaattta 32415619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 408 - 487
Target Start/End: Complemental strand, 8715634 - 8715555
Alignment:
Q  408 aatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||| ||||  |||||||| |||||||||||| ||||||||| ||||  | ||||||||||||||||||||||||    
T  8715634 aatggttaaggaagctaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcact 8715555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 408 - 487
Target Start/End: Complemental strand, 9067521 - 9067442
Alignment:
Q  408 aatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||| ||||  |||||||| |||||||||||| ||||||||| ||||  | ||||||||||||||||||||||||    
T  9067521 aatggttaaggaagctaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcact 9067442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 418 - 485
Target Start/End: Complemental strand, 44695794 - 44695727
Alignment:
Q  418 gaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||| ||||||||  |||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  44695794 gaagccaaaagtaacatgtttgcattgatttcaacaacattttaatttttaaaaagttaaatttatca 44695727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 487
Target Start/End: Complemental strand, 8847600 - 8847506
Alignment:
Q  393 cattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||| |||  ||||||||||| |||  ||||||||| |||||| ||||| ||||||||||||||  | ||||||||||||||||| ||||||    
T  8847600 cattgccctcatggcaatggttaaggaaaccaaaagtagcatgtttacattgttttcaacaatattttaacttttaaaaagttaaattaatcact 8847506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 483
Target Start/End: Complemental strand, 29915727 - 29915633
Alignment:
Q  389 taaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttat 483  Q
    ||||||||| | | ||| ||||| |||| |||| |||||||||||||||||||||| ||||||| | ||||  | ||||||||||||||||||||    
T  29915727 taaccattgacctgagaacaatgattaaggaagccaaaagtagaatgtttgcattggtttcaaccacattttgacttttaaaaagttaaatttat 29915633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 483
Target Start/End: Complemental strand, 29964880 - 29964786
Alignment:
Q  389 taaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttat 483  Q
    ||||||||| | | ||| ||||| |||| |||| |||||||||||||||||||||| ||||||| | ||||  | ||||||||||||||||||||    
T  29964880 taaccattgacctgagaacaatgattaaggaagccaaaagtagaatgtttgcattggtttcaaccacattttgacttttaaaaagttaaatttat 29964786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 444
Target Start/End: Original strand, 13350806 - 13350867
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattg 444  Q
    ||||||||| |||| | ||||||||||| |||||||||||||||||||| ||||||||||||    
T  13350806 tcttgctaatcattactttcagagcaatagttaaagaagtcaaaagtagcatgtttgcattg 13350867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 35306306 - 35306387
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||| |||| |||  ||||||||| ||||||||||||||||||| || ||||  | ||||||||||||||||||||||||    
T  35306306 gcaatgcttaaggaaaccaaaagtagcatgtttgcattgatttcaataacattttaacttttaaaaagttaaatttatcact 35306387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 413 - 487
Target Start/End: Complemental strand, 4759978 - 4759904
Alignment:
Q  413 ttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||| |||| ||||||||  |||||||||||| ||||||||| ||||  | ||||||||||||||||||||||||    
T  4759978 ttaaggaagccaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcact 4759904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 52570734 - 52570837
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaat--gtttgcattgatttcaacaatatttgtatttttaaaaagttaaatt 480  Q
    ||||||||||||||||  |||   |||||||||| || | ||||||||| ||  |||||||||| ||||||||||||||  | ||||||||||||| |||    
T  52570734 tcttgctaaccattgctctca---caatggttaaggatgccaaaagtagcatatgtttgcattggtttcaacaatattttgacttttaaaaagttatatt 52570830  T
Q  481 tatcact 487  Q
    |||||||    
T  52570831 tatcact 52570837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 483
Target Start/End: Original strand, 41345926 - 41346026
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||  | | |||| |||||||||  ||| ||||| || | ||||||||||| ||||||||||||||  | ||||||||| |||||||||    
T  41345926 tcttgctaaccattatcataagagtaatggttaagaaaggcaaaaatatattgtttgcattggtttcaacaatattttaacttttaaaaaattaaattta 41346025  T
Q  483 t 483  Q
    |    
T  41346026 t 41346026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 34060883 - 34060820
Alignment:
Q  424 aaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||  |||||||||||| |||||||||||||  | ||||||||||||||||| ||||||    
T  34060883 aaaagtagtttgtttgcattgaattcaacaatattttaacttttaaaaagttaaattcatcact 34060820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 424 - 485
Target Start/End: Complemental strand, 12905399 - 12905338
Alignment:
Q  424 aaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||||||| |||||||||||| ||||||||| ||||  | |||||||| |||||||||||||    
T  12905399 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaatgttaaatttatca 12905338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 487
Target Start/End: Complemental strand, 20227514 - 20227434
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||| |||| |||||||||||||  ||||||| |||| |||||| || ||||  | |||||| |||||||||||||||||    
T  20227514 caatgattaaggaagtcaaaagtaacatgtttgtattggtttcaataacattttaacttttaagaagttaaatttatcact 20227434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 487
Target Start/End: Complemental strand, 45899662 - 45899598
Alignment:
Q  423 caaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||| |||||| |||||| |||||||||||||  | ||||||||| ||||||| ||||||    
T  45899662 caaaagtagtatgtttacattgaattcaacaatattttgacttttaaaaatttaaattcatcact 45899598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 487
Target Start/End: Complemental strand, 18881 - 18841
Alignment:
Q  447 ttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||||||  ||||||||||||||||||| ||||||    
T  18881 ttcaacaatattttaatttttaaaaagttaaattcatcact 18841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 487
Target Start/End: Complemental strand, 19022 - 18982
Alignment:
Q  447 ttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||||||  ||||||||||||||||||| ||||||    
T  19022 ttcaacaatattttaatttttaaaaagttaaattcatcact 18982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 5e-63; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 18 - 271
Target Start/End: Complemental strand, 5961982 - 5961719
Alignment:
Q  18 ctcataagaagagaggaaggggcgaaaagaaccaactaaaaacaacagggcatcgcc----acagcaggaaataaactccctaacag--------caagc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    ||||||||||||||||||||||||||        |||||    
T  5961982 ctcataagaagagaggaaggggcgaaaagaaccaactaaaaacaacacggcagcgccccaaacagcaggaaataaactccctaacagccgtacaacaagc 5961883  T
Q  106 agccaaaaaacagcacctgatacagaagcaacaacaactgcatacag-aaataacataagggnnnnnnnnccagcaataaactaaaccaactaaaggcaa 204  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||| |||||||| |||||        ||||||| ||||||||||||||   | | |    
T  5961882 agccaaaaaacagcacctaatacagaagcaacaatagctgcatacagaaaataacagaagggaaaaaaacccagcaacaaactaaaccaact---gacta 5961786  T
Q  205 aaataatgattgttccaatatatgatgaatttgtgctcctacccttctttgcatcacatgttgttaa 271  Q
    ||  ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  5961785 aaccaatgattgttccaatttatgatgaatttgtgctcctacccttctctgcatcacatgttgttaa 5961719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 383 - 485
Target Start/End: Original strand, 39567854 - 39567956
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||||| |||| |||||| |||| |||||||||||||| |||||||||||| |||||||||| |||  |||||||||||||||||||||    
T  39567854 tcttgctaaccattgccctcagggcaatgattaaggaagtcaaaagtagcatgtttgcattggtttcaacaatgttttgatttttaaaaagttaaattta 39567953  T
Q  483 tca 485  Q
    |||    
T  39567954 tca 39567956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 376 - 487
Target Start/End: Complemental strand, 35653420 - 35653309
Alignment:
Q  376 ttatggctcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagtt 475  Q
    |||||| ||||||||||||||||| |||| ||||||||||| |||| ||||||||  |||||||||||| ||||||||| ||||  ||||| ||||||||    
T  35653420 ttatgggtcttgctaaccattgccctcagggcaatggttaaggaagccaaaagtaccatgtttgcattggtttcaacaacattttgattttcaaaaagtt 35653321  T
Q  476 aaatttatcact 487  Q
    ||||||||||||    
T  35653320 aaatttatcact 35653309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 25017449 - 25017345
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||||  ||| |||||||||||| |||||||||||||| ||||||| |||| ||||||| ||||||  | |||||||||||||||||||    
T  25017449 tcttgctaaccattgctctcaaagcaatggttaaggaagtcaaaagtagcatgtttgtattggtttcaacgatattttgacttttaaaaagttaaattta 25017350  T
Q  483 tcact 487  Q
    |||||    
T  25017349 tcact 25017345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 3639232 - 3639129
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||| ||||||||||||||||   ||||||||| |||||||||||||  |||||||||||| ||||||||||||||| | ||||||||| |||||||||    
T  3639232 tcttgttaaccattgccttcaggataatggttaaggaagtcaaaagtaatatgtttgcattggtttcaacaatatttg-acttttaaaaaattaaattta 3639134  T
Q  483 tcact 487  Q
    |||||    
T  3639133 tcact 3639129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 378 - 487
Target Start/End: Original strand, 12914121 - 12914230
Alignment:
Q  378 atggctcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaa 477  Q
    |||| ||||| ||| ||||||| | || | ||||||||| |||| ||||||||| |||||||||||| ||||||||||||||  ||||||||||| ||||    
T  12914121 atgggtcttgataatcattgccctgagggtaatggttaaggaagccaaaagtagtatgtttgcattggtttcaacaatattttgatttttaaaaaattaa 12914220  T
Q  478 atttatcact 487  Q
    ||||||||||    
T  12914221 atttatcact 12914230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 407 - 487
Target Start/End: Complemental strand, 338899 - 338818
Alignment:
Q  407 caatggttaaa-gaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||| ||||| |||||||| |||||||||||  ||||||||||||||  ||||||||||||||||||||||||||    
T  338899 caatggttaaaagaagttaaaagtagcatgtttgcatttgtttcaacaatattttgatttttaaaaagttaaatttatcact 338818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 4422099 - 4422018
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||| |||||||||||||  ||||||||||||| |||||||| ||||  |||| |||||||||||||||||||||    
T  4422099 gcaatggttaaggaagtcaaaagtaacatgtttgcattgacttcaacaacattttgatttgtaaaaagttaaatttatcact 4422018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 406 - 485
Target Start/End: Original strand, 39692984 - 39693063
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||||||||| |||||||||||||  ||||||| |||||||||||||||||||  | |||||||||| |||||||||||    
T  39692984 gcaatggttaaggaagtcaaaagtaacatgtttgtattgatttcaacaatattttaacttttaaaaagataaatttatca 39693063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 476
Target Start/End: Complemental strand, 16315690 - 16315597
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagtta 476  Q
    ||||||||||||||||| |||| ||||||||||| |||| |||||||||  ||||||||||| ||||||||| ||||  | | |||||||||||    
T  16315690 tcttgctaaccattgccctcagggcaatggttaaggaagccaaaagtagcgtgtttgcattggtttcaacaacattttgactattaaaaagtta 16315597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 27823212 - 27823314
Alignment:
Q  383 tcttgctaaccattgccttc-agagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattt 481  Q
    ||||||| ||||||||| || || |||||| |||| |||||||||| ||| ||||||| ||||||||||||   ||||  ||||||||||||||||||||    
T  27823212 tcttgctgaccattgccctccagggcaatgattaaggaagtcaaaattagcatgtttgtattgatttcaac---attttaatttttaaaaagttaaattt 27823308  T
Q  482 atcact 487  Q
    ||||||    
T  27823309 atcact 27823314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 485
Target Start/End: Original strand, 5151440 - 5151542
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    |||| |||||||||||  ||||  ||| |||||| |||| ||||||||| |||||||||||  ||||||||| ||||  | |||||||||||||||||||    
T  5151440 tcttactaaccattgctctcaggacaacggttaaggaaggcaaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaagttaaattta 5151539  T
Q  483 tca 485  Q
    |||    
T  5151540 tca 5151542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 411 - 483
Target Start/End: Complemental strand, 28143253 - 28143181
Alignment:
Q  411 ggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttat 483  Q
    ||||||||||| ||||||||| ||||||| |||  ||||||||| ||||  ||||||||||||||||||||||    
T  28143253 ggttaaagaagccaaaagtagcatgtttgtattagtttcaacaacattttgatttttaaaaagttaaatttat 28143181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 34546729 - 34546833
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    |||||||||| |||||| | || ||||||||||| |||| ||||||||  || ||||||||  ||||||||| ||||  | ||||||||| |||||||||    
T  34546729 tcttgctaactattgccctaagggcaatggttaaggaagccaaaagtatcatttttgcattagtttcaacaacattttaacttttaaaaaattaaattta 34546828  T
Q  483 tcact 487  Q
    |||||    
T  34546829 tcact 34546833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 437 - 487
Target Start/End: Original strand, 37243852 - 37243902
Alignment:
Q  437 ttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  37243852 ttgcattgatttcaacaacattttaatttttaaaaagttaaatttatcact 37243902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 13951371 - 13951290
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||| |||| ||||||||| ||| |||||||| ||||||||| ||||  | |||||||||  |||||||||||||    
T  13951371 gcaatggttaaggaagccaaaagtagcatgcttgcattggtttcaacaacattttgacttttaaaaaaataaatttatcact 13951290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 420 - 485
Target Start/End: Complemental strand, 43414185 - 43414120
Alignment:
Q  420 agtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||||||||||  |||||||||||| ||||||||| ||||  ||||||||||||||||||| ||||    
T  43414185 agtcaaaagtaacatgtttgcattggtttcaacaacattttgatttttaaaaagttaaattgatca 43414120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 485
Target Start/End: Original strand, 8410093 - 8410195
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||| ||| ||||||| |||  |||||| |||| |||| ||||| ||| ||||||| |||| ||| || || ||||  | |||||||||||||||||||    
T  8410093 tcttgttaatcattgccctcaaggcaatgattaaggaagccaaaactagcatgtttgtattggttttaataacattttgacttttaaaaagttaaattta 8410192  T
Q  483 tca 485  Q
    |||    
T  8410193 tca 8410195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 433 - 487
Target Start/End: Complemental strand, 25568400 - 25568346
Alignment:
Q  433 atgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||||| |||||| || ||||  |||||||||||||||||| |||||||    
T  25568400 atgtttgcattggtttcaataacattttgatttttaaaaagttaaatgtatcact 25568346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 480
Target Start/End: Complemental strand, 39042170 - 39042096
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatt 480  Q
    |||||||||||||||| ||||| ||| |||||| ||||||  ||||||| ||||  | ||||||||| |||||||    
T  39042170 gcaatggttaaagaagccaaaaatagcatgtttacattgacatcaacaacattttaacttttaaaaaattaaatt 39042096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 4962651 - 4962570
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||   ||| ||||||||| ||||||| |||  ||||||||| ||||  | ||| ||||||||||||||||||||    
T  4962651 gcaatggttaggaaagacaaaagtagcatgtttgtattagtttcaacaacattttgactttaaaaaagttaaatttatcact 4962570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 487
Target Start/End: Original strand, 5058748 - 5058800
Alignment:
Q  435 gtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||| ||| ||||||||| | |  ||||||||||||||||||||||||||    
T  5058748 gtttgcaatgagttcaacaatttgttaatttttaaaaagttaaatttatcact 5058800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 487
Target Start/End: Complemental strand, 12068307 - 12068228
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||  ||||||||| ||| ||||||| |||| | |||| || ||||  | ||||||||||||||||||||||||    
T  12068307 caatggttaagaaagtcaaaa-tagcatgtttgtattggtgtcaataacattttgacttttaaaaagttaaatttatcact 12068228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 479
Target Start/End: Original strand, 15915014 - 15915083
Alignment:
Q  408 aatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaat 479  Q
    ||||||||| |||  ||||||||| |||||||  |||||||||| |||||||  | ||||||||||||||||    
T  15915014 aatggttaaggaaaccaaaagtagtatgtttg--ttgatttcaaaaatattttaacttttaaaaagttaaat 15915083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 9e-31; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 39085950 - 39085846
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||| | |||||||||||||||| ||||||||||| || |||||||||||||||||||||| ||||  | |||||||||||||||||||    
T  39085950 tcttgctaaccattgtcctcagagcaatggttaaggaagtcaaaagcagcatgtttgcattgatttcaacaacattttgacttttaaaaagttaaattta 39085851  T
Q  483 tcact 487  Q
    |||||    
T  39085850 tcact 39085846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 385 - 485
Target Start/End: Original strand, 6999155 - 6999255
Alignment:
Q  385 ttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatc 484  Q
    ||||||||||||| | |||| ||||||||||| |||| ||||||||| |||||||||||| ||||||||| ||||  | |||||||||||||||||||||    
T  6999155 ttgctaaccattgtcctcagggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatc 6999254  T
Q  485 a 485  Q
    |    
T  6999255 a 6999255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 27495097 - 27495178
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||||| ||||  |||||||||| |||||||||||||||    
T  27495097 gcaatggttaaggaagtcaaaagtagtatgtttgcattggtttcaacaacattttgatttttaaaatgttaaatttatcact 27495178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 410 - 487
Target Start/End: Original strand, 15004905 - 15004982
Alignment:
Q  410 tggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||||||||||||||  ||||||| |||| ||||||||| ||||  ||||||||||||||||||||||||||    
T  15004905 tggttaaagaagtcaaaagtatcatgtttgtattggtttcaacaacattttaatttttaaaaagttaaatttatcact 15004982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 41436452 - 41436533
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||||| ||||  | |||||||||||||| |||||||||    
T  41436452 gcaatggttaatgaagtcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaagtttatcact 41436533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 9201652 - 9201549
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||||||  ||||||| ||||  |||||||| ||||  | |||||||||||||||||||    
T  9201652 tcttgctaactattgccctcagggcaatagttaaagaagtcaaaagtaacatgtttgtattg-gttcaacaacattttgacttttaaaaagttaaattta 9201554  T
Q  483 tcact 487  Q
    |||||    
T  9201553 tcact 9201549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 483
Target Start/End: Original strand, 1321118 - 1321219
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatgg-ttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattt 481  Q
    ||||||||||||||||| |||| ||||||| |||| |||| ||||  ||| |||||| ||||||||||||||| ||||  ||||||||| ||||||||||    
T  1321118 tcttgctaaccattgccctcagggcaatgggttaaggaagccaaagttagcatgtttacattgatttcaacaacattttgatttttaaagagttaaattt 1321217  T
Q  482 at 483  Q
    ||    
T  1321218 at 1321219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 2966491 - 2966595
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||| ||||| | |||| ||||||||||| ||||  |||||||| || ||||||||| ||||||||| ||||  | ||||||||| |||||||||    
T  2966491 tcttgctaatcattgtcctcagggcaatggttaaggaagctaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaaattaaattta 2966590  T
Q  483 tcact 487  Q
    |||||    
T  2966591 tcact 2966595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 862563 - 862644
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||| |||| |||| ||||||||| |||||||||||| ||||||||| ||||  | | ||||||||||||||||||||||    
T  862563 gcaatgattaaggaagccaaaagtagcatgtttgcattggtttcaacaagattttgactcttaaaaagttaaatttatcact 862644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 23685787 - 23685706
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||| |||| |||| ||||||||  ||||||||||||||||||| || ||||  | ||||||||||||||||||||||||    
T  23685787 gcaatgtttaaggaagccaaaagtaacatgtttgcattgatttcaataacattttgacttttaaaaagttaaatttatcact 23685706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 433 - 485
Target Start/End: Complemental strand, 13998012 - 13997960
Alignment:
Q  433 atgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  13998012 atgtttgtattgatttcaacaatattttaatttttaaaaagttaaatttatca 13997960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 407 - 483
Target Start/End: Original strand, 33726355 - 33726431
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttat 483  Q
    |||||||||| ||| |||||| ||| ||||||| |||||||||||||||||||  | ||||| ||||||||||||||    
T  33726355 caatggttaaggaaatcaaaaatagcatgtttgtattgatttcaacaatattttaacttttagaaagttaaatttat 33726431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 487
Target Start/End: Complemental strand, 35445423 - 35445344
Alignment:
Q  409 atggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaata-tttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||  ||||||||||||| ||||||| |||| ||||||||||| ||||  |||| ||||||||||||||||||||    
T  35445423 atggttaagcaagtcaaaagtagcatgtttgtattggtttcaacaatattttgacttttgaaaaagttaaatttatcact 35445344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 406 - 480
Target Start/End: Complemental strand, 39401669 - 39401595
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatt 480  Q
    ||||||||||| |||| ||||||||| ||||||| |||| ||||||||| ||||  | |||||||||||||||||    
T  39401669 gcaatggttaaggaagccaaaagtagcatgtttgtattggtttcaacaaaattttgacttttaaaaagttaaatt 39401595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 17056192 - 17056111
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||| |||| ||||| ||| || ||||||||| ||||||||| ||||    ||||||||||||||||||||||||    
T  17056192 gcaatggttaaggaagccaaaaatagcatatttgcattggtttcaacaacattttgtcttttaaaaagttaaatttatcact 17056111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 17068639 - 17068558
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||| |||| ||||| ||| || ||||||||| ||||||||| ||||    ||||||||||||||||||||||||    
T  17068639 gcaatggttaaggaagccaaaaatagcatatttgcattggtttcaacaacattttgtcttttaaaaagttaaatttatcact 17068558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 17095201 - 17095120
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||| |||  ||||| ||| || ||||||||| ||||||||| ||||  | ||||||||||||||||||||||||    
T  17095201 gcaatggttaaggaatgcaaaaatagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcact 17095120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 487
Target Start/End: Complemental strand, 44299815 - 44299735
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||| |||| ||||| ||| ||| || ||||| ||||||||||||||  | |||||||| |||||||||||||||    
T  44299815 caatggttaaggaagccaaaaatagtatgcttacattggtttcaacaatattttgacttttaaaatgttaaatttatcact 44299735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 487
Target Start/End: Complemental strand, 765258 - 765204
Alignment:
Q  433 atgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||||| ||||||||| ||||  | ||||||||||||||||||||||||    
T  765258 atgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcact 765204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 480
Target Start/End: Original strand, 11659236 - 11659310
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatt 480  Q
    ||||||||||| |||  |||||| || || ||| |||||| |||||||||||||  |||||||||||||||||||    
T  11659236 gcaatggttaaggaaaccaaaagcagtatatttacattgaattcaacaatattttaatttttaaaaagttaaatt 11659310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 485
Target Start/End: Complemental strand, 17118506 - 17118429
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||||||||| |||| ||||| ||  || ||||||||| ||||||||| ||||| | ||||||||||||||||||||||    
T  17118506 caatggttaaggaagccaaaaataacatatttgcattggtttcaacaacatttg-agttttaaaaagttaaatttatca 17118429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 485
Target Start/End: Original strand, 44173071 - 44173172
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    |||||||||||||| |  ||||  ||| ||||||||||| ||||| ||  ||||||| |||| ||||||||| ||||  ||||||||||| |||||||||    
T  44173071 tcttgctaaccattactctcaggacaacggttaaagaagccaaaa-taatatgtttgtattggtttcaacaacattttaatttttaaaaaattaaattta 44173169  T
Q  483 tca 485  Q
    |||    
T  44173170 tca 44173172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 481
Target Start/End: Complemental strand, 11445456 - 11445379
Alignment:
Q  404 gagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattt 481  Q
    ||||||||||||| |||  ||||||||  |||||||||||| ||||||||| ||||  |  |||||||||||||||||    
T  11445456 gagcaatggttaaggaaaccaaaagtaacatgtttgcattggtttcaacaacattttgacatttaaaaagttaaattt 11445379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 17074622 - 17074541
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||| |||| ||||| ||| || ||||||||  ||||||||| ||||    ||||||||||||||||||||||||    
T  17074622 gcaatggttaaggaagccaaaaatagcatatttgcattagtttcaacaacattttgtcttttaaaaagttaaatttatcact 17074541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 22587867 - 22587830
Alignment:
Q  232 aatttgtgctcctacccttctttgcatcacatgttgtt 269  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  22587867 aatttgtgctcctacccttctctgcatcacatgttgtt 22587830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 485
Target Start/End: Original strand, 17603812 - 17603864
Alignment:
Q  433 atgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||||||||||||||||| || ||||  | ||||||||||||||||||||||    
T  17603812 atgtttgcattgatttcaataacattttgacttttaaaaagttaaatttatca 17603864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 485
Target Start/End: Original strand, 16361540 - 16361619
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||||| |||| |||| ||||||||  |||||||||||| |||| |||| ||||  | ||||| ||||||||||||||||    
T  16361540 gcaatgattaaggaagccaaaagtaacatgtttgcattggtttcgacaacattttgacttttataaagttaaatttatca 16361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 485
Target Start/End: Original strand, 464770 - 464848
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||| |||| ||||| |||||||  ||||||| ||||||||||| || ||||  | ||||||||||||||| ||||||    
T  464770 caatgattaaggaagttaaaagtaacatgtttgtattgatttcaataacattttaacttttaaaaagttaaaattatca 464848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 487
Target Start/End: Complemental strand, 3454816 - 3454752
Alignment:
Q  422 tcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||| |  |||| ||||| ||||||||||||| || ||||||||||||||| ||||||||    
T  3454816 tcaaaagtagtaattttgtattgaattcaacaatattt-tacttttaaaaagttaaagttatcact 3454752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 483
Target Start/End: Original strand, 33864331 - 33864406
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttat 483  Q
    |||||||||| |||||| || |||  || ||||||||| ||||||||||||||  | |||||||| |||||||||||    
T  33864331 caatggttaaggaagtcgaa-gtaacatatttgcattggtttcaacaatattttgacttttaaaatgttaaatttat 33864406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 383 - 485
Target Start/End: Original strand, 1910195 - 1910297
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| ||||  ||||||||| ||||  | |||||||||||||||||||    
T  1910195 tcttgctaaccattgccatcagggcaatggttaaagaagtcaaaagtagcatgtttacatttgtttcaacaacattttaacttttaaaaagttaaattta 1910294  T
Q  483 tca 485  Q
    |||    
T  1910295 tca 1910297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 377 - 487
Target Start/End: Complemental strand, 7323117 - 7323007
Alignment:
Q  377 tatggctcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagtta 476  Q
    ||||| ||||||||| ||||| | | ||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||  | ||||||||| |||    
T  7323117 tatgggtcttgctaatcattgtcctgagagcaatggttaaagaagtcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaaatta 7323018  T
Q  477 aatttatcact 487  Q
    |||||||||||    
T  7323017 aatttatcact 7323007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 10575917 - 10575813
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||| |||| |||| || | ||||||||||||||| |||||||||| || ||| |||||| |||||||||||||| | ||||||||||||||||||     
T  10575917 tcttgctcaccagtgccctcggggcaatggttaaagaaatcaaaagtagtatattttcattgaattcaacaatatttggagttttaaaaagttaaatttt 10575818  T
Q  483 tcact 487  Q
    |||||    
T  10575817 tcact 10575813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 377 - 487
Target Start/End: Original strand, 29687421 - 29687531
Alignment:
Q  377 tatggctcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagtta 476  Q
    ||||| ||||||||||||||||| |||  |||||  |||| |||| ||||||||| |||||||||||| ||||||||| ||||  | |||||||||||||    
T  29687421 tatgggtcttgctaaccattgccctcaaggcaatacttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagtta 29687520  T
Q  477 aatttatcact 487  Q
    |||| ||||||    
T  29687521 aattcatcact 29687531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 410 - 487
Target Start/End: Complemental strand, 27053624 - 27053547
Alignment:
Q  410 tggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||| |||  |||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||    
T  27053624 tggttaaggaaaccaaaagtagaatgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcact 27053547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 408 - 485
Target Start/End: Complemental strand, 30388793 - 30388716
Alignment:
Q  408 aatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||||||||||||||||||||||| ||||||  ||||||||||| |||||||  | ||||||||||||||||||||||    
T  30388793 aatggttaaagaagtcaaaagtagtatgtttatattgatttcaataatattttgacttttaaaaagttaaatttatca 30388716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 377 - 487
Target Start/End: Complemental strand, 8258802 - 8258692
Alignment:
Q  377 tatggctcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagtta 476  Q
    ||||| ||||||||||||||||| | || |||||| |||  |||| ||||||||| |||||||||||| ||||||||| |||   | | |||||||||||    
T  8258802 tatgggtcttgctaaccattgcccttagtgcaatgattattgaaggcaaaagtagtatgtttgcattggtttcaacaaaattatgactattaaaaagtta 8258703  T
Q  477 aatttatcact 487  Q
    |||||||||||    
T  8258702 aatttatcact 8258692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 483
Target Start/End: Original strand, 8292698 - 8292796
Alignment:
Q  385 ttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttat 483  Q
    ||||||||||||| | | || ||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||  | ||||||||||  ||||||||    
T  8292698 ttgctaaccattgtcgtgagggcaatggttaaggaagtcaaaagtagcatgtttggattgatttcaacaacattttgacttttaaaaaggcaaatttat 8292796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 487
Target Start/End: Complemental strand, 5240495 - 5240386
Alignment:
Q  378 atggctcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaa 477  Q
    |||| ||| |||||||| |||||| |   |||||||||| |||| ||||||||| |||||||||||| |||||| || ||||  | ||||||||||||||    
T  5240495 atgggtctcgctaaccaatgcctttaagacaatggttaaggaagccaaaagtagcatgtttgcattggtttcaataacattttgacttttaaaaagttaa 5240396  T
Q  478 atttatcact 487  Q
    ||||||||||    
T  5240395 atttatcact 5240386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 8380415 - 8380496
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||| |||| ||||||||| |||||| ||||| ||||||||| ||||  | ||||||||||||||||||||||||    
T  8380415 gcaatggttaaggaagccaaaagtagtatgttttcattggtttcaacaacattttgacttttaaaaagttaaatttatcact 8380496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 407 - 487
Target Start/End: Original strand, 22521561 - 22521641
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||  ||||||||||||| |||||||||||| ||||||||| ||||  | |||||| |||||||||||||||||    
T  22521561 caatggttaagaaagtcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaagaagttaaatttatcact 22521641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 407 - 486
Target Start/End: Complemental strand, 41188920 - 41188841
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcac 486  Q
    |||||||||| |||| |||| |||| |||||||||||||||||||||  ||||  | |||||||||||||||||||||||    
T  41188920 caatggttaaggaagccaaatgtagtatgtttgcattgatttcaacagcattttgacttttaaaaagttaaatttatcac 41188841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 24359839 - 24359765
Alignment:
Q  410 tggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatc 484  Q
    ||||||| |||| ||||||||| |||||||||||| ||||||||| ||||  | |||||||||||||||||||||    
T  24359839 tggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaatttatc 24359765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 401 - 487
Target Start/End: Original strand, 29034656 - 29034742
Alignment:
Q  401 tcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||| |||||||||||  ||| ||||||||| |||||||||||  ||||||||| ||||  | ||||||||||||||||||||||||    
T  29034656 tcagggcaatggttaagaaagccaaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaagttaaatttatcact 29034742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 375 - 487
Target Start/End: Original strand, 36279068 - 36279174
Alignment:
Q  375 cttatggctcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagt 474  Q
    ||||||| ||||| |||||||||||    | |||||||||||  ||| ||||||||| ||||||||||| ||||||||   ||||  |||||||||||||    
T  36279068 cttatgggtcttgttaaccattgccc---gggcaatggttaagaaaggcaaaagtagcatgtttgcattaatttcaac---attttgatttttaaaaagt 36279161  T
Q  475 taaatttatcact 487  Q
    |||||||||||||    
T  36279162 taaatttatcact 36279174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 413 - 487
Target Start/End: Original strand, 40194807 - 40194881
Alignment:
Q  413 ttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||| |||| |||||||| |||||||||||| ||||||||| ||||  | ||||||||| ||||||||||||||    
T  40194807 ttaaaaaagttaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcact 40194881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 407 - 485
Target Start/End: Complemental strand, 46478689 - 46478611
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||||||||| |||| ||||||||  || ||||||||  ||||||||||||||  | ||||||||||||||||||||||    
T  46478689 caatggttaacgaagccaaaagtaacatatttgcattagtttcaacaatattttaacttttaaaaagttaaatttatca 46478611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 385 - 487
Target Start/End: Original strand, 49069508 - 49069610
Alignment:
Q  385 ttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatc 484  Q
    |||||||||| || | |||||  ||||||||| |||  ||||||||  ||||||| |||| |||||||||||| |  ||||||||||||||| |||||||    
T  49069508 ttgctaaccagtgtcctcagaataatggttaaggaaaccaaaagtaacatgtttgtattggtttcaacaatatattgatttttaaaaagttagatttatc 49069607  T
Q  485 act 487  Q
    |||    
T  49069608 act 49069610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 42222195 - 42222276
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||| |||   |||||||  ||||||| |||| ||||||||||||||  | ||||||||||||||||||||||||    
T  42222195 gcaatggttaaggaaactaaaagtaacatgtttgtattggtttcaacaatattttgacttttaaaaagttaaatttatcact 42222276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 3681646 - 3681749
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||||| |  |  |||||||||||||||||||  ||   ||| |||||||| ||||||||| ||||  | |||||||||||||||||||    
T  3681646 tcttgctaaccattgccctttggccaatggttaaagaagtcaaccgtgacatg-ttgcattggtttcaacaacattttaacttttaaaaagttaaattta 3681744  T
Q  483 tcact 487  Q
    |||||    
T  3681745 tcact 3681749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 487
Target Start/End: Complemental strand, 31626147 - 31626095
Alignment:
Q  435 gtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||| ||||||||| ||||  ||||||||||||||||||||||||||    
T  31626147 gtttgcattggtttcaacaacattttgatttttaaaaagttaaatttatcact 31626095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 40763241 - 40763304
Alignment:
Q  424 aaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||| || ||||||||| ||||||||| ||||  | ||||||||||||||||||||||||    
T  40763241 aaaagtagcatatttgcattggtttcaacaacattttaacttttaaaaagttaaatttatcact 40763304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 43567623 - 43567560
Alignment:
Q  424 aaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||  |||||||||||| ||||||||| ||||  | ||||||||||||||||||||||||    
T  43567623 aaaagtatcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcact 43567560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 487
Target Start/End: Complemental strand, 5348097 - 5348026
Alignment:
Q  413 ttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||| |||| ||||||||| |||||||||||| ||||||||   |||  | ||||||||||||||||||||||||    
T  5348097 ttaaggaagccaaaagtagcatgtttgcattggtttcaaca---ttttgacttttaaaaagttaaatttatcact 5348026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 485
Target Start/End: Complemental strand, 30538595 - 30538536
Alignment:
Q  423 caaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||||||  |||||||||||||||||||||   |||  ||||||||||||||||||||||||    
T  30538595 caaaagtaacatgtttgcattgatttcaaca---ttttgatttttaaaaagttaaatttatca 30538536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 485
Target Start/End: Complemental strand, 40067045 - 40066973
Alignment:
Q  411 ggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||||| |||| ||||||||| || |||| |||| ||| ||||| |||| |||||||||||||||||||||||||    
T  40067045 ggttaaggaaggcaaaagtagtat-tttgtattggttttaacaacattt-tatttttaaaaagttaaatttatca 40066973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 485
Target Start/End: Original strand, 6548510 - 6548583
Alignment:
Q  412 gttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||||| | |||||||||| | ||||||||||  | |||||||||||  | ||||||||||||||||| ||||    
T  6548510 gttaaaggaatcaaaagtagtaagtttgcattggatccaacaatattttaacttttaaaaagttaaattcatca 6548583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 487
Target Start/End: Complemental strand, 18800267 - 18800202
Alignment:
Q  422 tcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||| | ||||| | ||  ||||||||||||   ||||||||||||||||||||||||||    
T  18800267 tcaaaagtagtaagtttgtaatggattcaacaatattgtaatttttaaaaagttaaatttatcact 18800202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 5e-26; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 26572235 - 26572131
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||||| |||| ||||||||||| |||||||||||||| |||||||||||| ||| ||||||||||  | ||||||||  |||||||||    
T  26572235 tcttgctaaccattgccctcagggcaatggttaaggaagtcaaaagtagcatgtttgcattggttttaacaatattttaacttttaaaatattaaattta 26572136  T
Q  483 tcact 487  Q
    |||||    
T  26572135 tcact 26572131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 7875339 - 7875235
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||||| || | |||||| |||| |||| ||||||||| |||| ||||||| ||||||||||||||  | |||||||||||||||||||    
T  7875339 tcttgctaaccattgccctcggggcaatgattaaggaagccaaaagtagcatgtctgcattggtttcaacaatattttgacttttaaaaagttaaattta 7875240  T
Q  483 tcact 487  Q
    |||||    
T  7875239 tcact 7875235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 406 - 485
Target Start/End: Original strand, 5578248 - 5578327
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||||||||| |||||||||||||| |||||||||||  ||||||||||||||  | ||||||||||||||||||||||    
T  5578248 gcaatggttaaggaagtcaaaagtagcatgtttgcatttgtttcaacaatattttgacttttaaaaagttaaatttatca 5578327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 383 - 481
Target Start/End: Complemental strand, 16437740 - 16437642
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattt 481  Q
    ||||| ||||||||||| | || ||||||||||| |||  ||| ||||| |||||||||||| |||||||||||||| || ||||||||||||||||||    
T  16437740 tcttgttaaccattgccctgagggcaatggttaaggaaaccaacagtagcatgtttgcattggtttcaacaatatttttacttttaaaaagttaaattt 16437642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 10855384 - 10855487
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||| | | || ||||||||||||||| |||||||||| || |||||| || ||||||||| ||||  | |||||||||||||||||||    
T  10855384 tcttgctaaccattgtcctgagggcaatggttaaagaaatcaaaagtagcatatttgca-tggtttcaacaacattttgacttttaaaaagttaaattta 10855482  T
Q  483 tcact 487  Q
    |||||    
T  10855483 tcact 10855487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 12191467 - 12191548
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||| |||| ||||||||| ||||||| |||||||||||||| ||||  | ||||||||| ||||||||||||||    
T  12191467 gcaatggttaaggaaggcaaaagtagcatgtttgtattgatttcaacaacattttgacttttaaaaaattaaatttatcact 12191548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 7880585 - 7880481
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    |||||||||||||| || || | |||||| |||| |||| ||||||||| |||| || |||  ||||||||||||||  | |||||||||||||||||||    
T  7880585 tcttgctaaccattaccctcggggcaatgattaaggaagccaaaagtagcatgtctgtattagtttcaacaatattttgacttttaaaaagttaaattta 7880486  T
Q  483 tcact 487  Q
    |||||    
T  7880485 tcact 7880481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 385 - 487
Target Start/End: Complemental strand, 6507545 - 6507443
Alignment:
Q  385 ttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatc 484  Q
    |||||||||  |||| ||||  |||||||||| ||| |||||||||| || | | |||||| ||||||||| |||  |||||||||||||||||||| ||    
T  6507545 ttgctaaccggtgccctcaggacaatggttaaggaaatcaaaagtagtatatatacattgaattcaacaatgttttgatttttaaaaagttaaatttttc 6507446  T
Q  485 act 487  Q
    |||    
T  6507445 act 6507443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 487
Target Start/End: Original strand, 6866916 - 6866970
Alignment:
Q  433 atgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||||||||||||||| ||||  | |||||||| |||||||||||||||    
T  6866916 atgtttgcattgatttcaacaacattttgacttttaaaaggttaaatttatcact 6866970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 7274349 - 7274268
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||| |||| |||  ||||||||  ||||||| |||||||||||||| ||||  | |||||||| |||||||||||||||    
T  7274349 gcaatgattaaggaaaccaaaagtaacatgtttgtattgatttcaacaacattttaacttttaaaatgttaaatttatcact 7274268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 407 - 480
Target Start/End: Complemental strand, 34780112 - 34780039
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatt 480  Q
    |||||||||| ||| |||||||||| || ||| |||||| ||||||||| |||  | |||||||||||||||||    
T  34780112 caatggttaaggaaatcaaaagtagtatatttacattgaattcaacaatgttttaacttttaaaaagttaaatt 34780039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 485
Target Start/End: Complemental strand, 8324251 - 8324160
Alignment:
Q  394 attgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||||| ||||  |||||||||| ||||  |||| ||  ||||||  |||| ||||||||| ||||  ||||||||||||||||||||||||    
T  8324251 attgccctcaggacaatggttaaggaaggtaaaaataacatgtttatattggtttcaacaacattttaatttttaaaaagttaaatttatca 8324160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 473
Target Start/End: Original strand, 32786043 - 32786110
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaag 473  Q
    ||||||||||| |||  ||||||||| |||||||||||| ||||||||| ||||  | ||||||||||    
T  32786043 gcaatggttaaggaaaccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaag 32786110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 480
Target Start/End: Complemental strand, 12226489 - 12226392
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatt 480  Q
    |||||||||||  |||| ||||  |||||||||| |||  ||||| ||| || ||| |||||| ||||||||| ||| || ||| |||||||||||||    
T  12226489 tcttgctaaccggtgccctcaggacaatggttaaggaaaccaaaaatagtatatttacattgaattcaacaatgtttttactttcaaaaagttaaatt 12226392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 416
Target Start/End: Original strand, 8825031 - 8825071
Alignment:
Q  376 ttatggctcttgctaaccattgccttcagagcaatggttaa 416  Q
    |||||| ||||||||||||||||||| || |||||||||||    
T  8825031 ttatgggtcttgctaaccattgccttgagggcaatggttaa 8825071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 5e-26; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 30475376 - 30475480
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||||| |||||||||| ||||| |||| ||||||||  |||||||||||| ||||||||||||||  |  ||||||||||||||||||    
T  30475376 tcttgctaaccattgccctcagagcaatagttaaggaagccaaaagtaatatgtttgcattggtttcaacaatattttgacatttaaaaagttaaattta 30475475  T
Q  483 tcact 487  Q
    |||||    
T  30475476 tcact 30475480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 378 - 485
Target Start/End: Original strand, 54339059 - 54339166
Alignment:
Q  378 atggctcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaa 477  Q
    |||| ||||||||||||||||| |||||||||||||||| |||||||||||||| || ||| ||||| |||||| |||||||  | ||||||||| ||||    
T  54339059 atgggtcttgctaaccattgccctcagagcaatggttaaggaagtcaaaagtagcatatttacattggtttcaaaaatattttgacttttaaaaaattaa 54339158  T
Q  478 atttatca 485  Q
    ||||||||    
T  54339159 atttatca 54339166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 390 - 484
Target Start/End: Complemental strand, 9693622 - 9693528
Alignment:
Q  390 aaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatc 484  Q
    |||||||| | |||||||||||||||| |||||||||| ||| |||||||||||| ||||||||||||||  | |||||||||||||||||||||    
T  9693622 aaccattgtcctcagagcaatggttaaggaagtcaaaaatagcatgtttgcattggtttcaacaatatttcgacttttaaaaagttaaatttatc 9693528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 23765529 - 23765633
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||||| ||||  |||| ||||| ||||  |||||||| |||||||||||| ||||||||| ||||  |||||||||||||||||||||    
T  23765529 tcttgctaaccattgccctcaggacaattgttaaggaagctaaaagtagcatgtttgcattggtttcaacaacattttgatttttaaaaagttaaattta 23765628  T
Q  483 tcact 487  Q
    |||||    
T  23765629 tcact 23765633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 45688694 - 45688798
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    |||||||||||||||| ||||| ||||| ||||| |||| ||||||||| |||||||||||  ||||||||| ||||  | |||||||||||||||||||    
T  45688694 tcttgctaaccattgcattcagggcaatagttaaggaagccaaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaagttaaattta 45688793  T
Q  483 tcact 487  Q
    |||||    
T  45688794 tcact 45688798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 47188823 - 47188719
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||||| |||| ||||||||||| |||| ||||||||| |||||||||||| ||||||||| ||||  | |||| | ||||||||||||    
T  47188823 tcttgctaaccattgccatcagggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgactttttagaagttaaattta 47188724  T
Q  483 tcact 487  Q
    |||||    
T  47188723 tcact 47188719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 408 - 487
Target Start/End: Original strand, 31754914 - 31754993
Alignment:
Q  408 aatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||||||||||  | ||||||||||||||||||||||||    
T  31754914 aatggttaaggaagtcaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcact 31754993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 41956370 - 41956269
Alignment:
Q  384 cttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttat 483  Q
    |||| ||| ||||||| |||||||||||||||| |||| ||||||||| ||||||||||||  |||||||| ||||  | ||||||||||||||||||||    
T  41956370 cttgttaatcattgccctcagagcaatggttaaggaaggcaaaagtagcatgtttgcattggcttcaacaacattttgacttttaaaaagttaaatttat 41956271  T
Q  484 ca 485  Q
    ||    
T  41956270 ca 41956269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 26040518 - 26040414
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||| | |||||||| ||||||| |||| ||||||||| || |||||||||  |||||||||||||  | ||||||||||||||| |||    
T  26040518 tcttgctaaccattgtcctcagagcagtggttaaggaagccaaaagtagcatatttgcattggcttcaacaatattttgacttttaaaaagttaaactta 26040419  T
Q  483 tcact 487  Q
    |||||    
T  26040418 tcact 26040414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 26831943 - 26831840
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    |||||||||||||| || ||   ||||| |||||||||||||||||||| |||||||||||| ||||||||| ||||  |||||||||||| ||||||||    
T  26831943 tcttgctaaccattaccctcgtggcaatcgttaaagaagtcaaaagtagcatgtttgcattg-tttcaacaacattttaatttttaaaaagataaattta 26831845  T
Q  483 tcact 487  Q
    |||||    
T  26831844 tcact 26831840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 387 - 487
Target Start/End: Original strand, 2362584 - 2362686
Alignment:
Q  387 gctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtattttt--aaaaagttaaatttatc 484  Q
    |||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||| ||||| ||||  | ||||  ||||| |||||||||||    
T  2362584 gctaaccattgccttcagggcaatggttaaggaagtcaaaagtagtatgtttgcattggttttaacaacattttgacttttaaaaaaaattaaatttatc 2362683  T
Q  485 act 487  Q
    |||    
T  2362684 act 2362686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 407 - 486
Target Start/End: Complemental strand, 19329062 - 19328983
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcac 486  Q
    |||||||||| |||| ||||||||| |||||||||||| ||||||||||||||  | |||||||||||||||||||||||    
T  19329062 caatggttaaggaaggcaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcac 19328983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 408 - 487
Target Start/End: Original strand, 20811239 - 20811318
Alignment:
Q  408 aatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||| ||||  | ||||||||||||||||||||||||    
T  20811239 aatggttaaagaagccaaaagtagcatgtttgcattgattttaacaacattttgacttttaaaaagttaaatttatcact 20811318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 383 - 481
Target Start/End: Complemental strand, 34316881 - 34316783
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattt 481  Q
    |||||||| |||||||| || |  |||||||||| |||| ||||||||| |||||||||||| ||||||||||||||  | ||||||||||||||||||    
T  34316881 tcttgctagccattgccctcgggacaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaattt 34316783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 51266898 - 51266979
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||| |||| |||||||||||||| ||||||| |||||||||||||| ||||  | ||||||||||||||||||||||||    
T  51266898 gcaatgattaaggaagtcaaaagtagcatgtttgtattgatttcaacaacattttgacttttaaaaagttaaatttatcact 51266979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 34016577 - 34016680
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||||||| ||| ||||| ||||  |||  |||| |||||||||||||||||||||||||| ||||  | ||||||||||||||||| |    
T  34016577 tcttgctaaccattgccttaaga-caatgattaagaaagctaaaaatagaatgtttgcattgatttcaacaacattttgacttttaaaaagttaaattca 34016675  T
Q  483 tcact 487  Q
    |||||    
T  34016676 tcact 34016680  T

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Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 407 - 485
Target Start/End: Complemental strand, 35808530 - 35808452
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||||||||| |||| ||||||||| |||||||||||| ||||||||| ||||  | ||||||||||||||||||||||    
T  35808530 caatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatca 35808452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 31168108 - 31168189
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||||||||| |||||||||||||||| ||||| ||||||||| ||||  | ||| ||||| ||||||||||||||    
T  31168108 gcaatggttaaagaagccaaaagtagaatgtttacattggtttcaacaacattttgactttaaaaaaattaaatttatcact 31168189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 394 - 487
Target Start/End: Original strand, 33951662 - 33951755
Alignment:
Q  394 attgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||| |||| ||||||||||| |||| ||||| ||  ||||||| |||| ||||||||| ||||  ||||||||||||||||||||||||||    
T  33951662 attgccctcagggcaatggttaaggaagccaaaattaacatgtttgtattggtttcaacaacattttaatttttaaaaagttaaatttatcact 33951755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 374 - 487
Target Start/End: Complemental strand, 50514780 - 50514667
Alignment:
Q  374 tcttatggctcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaag 473  Q
    |||| ||| |||||||||||||||||   |   |||||||||| |||  ||||||||| |||||||||||| ||||||||| ||||  | ||||||||||    
T  50514780 tcttttgggtcttgctaaccattgccccgatgtcaatggttaaggaaaccaaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaag 50514681  T
Q  474 ttaaatttatcact 487  Q
    ||||||||||||||    
T  50514680 ttaaatttatcact 50514667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 393 - 485
Target Start/End: Original strand, 55669700 - 55669792
Alignment:
Q  393 cattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||||| | || ||||||||||| |||| ||||||||| |||||||||||| ||| ||||| ||||  | ||||||||||||||||||||||    
T  55669700 cattgccctgagggcaatggttaaggaagccaaaagtagcatgtttgcattgtttttaacaacattttgacttttaaaaagttaaatttatca 55669792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 408 - 487
Target Start/End: Original strand, 32131118 - 32131197
Alignment:
Q  408 aatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||||||| |||||||  |||||||||||| ||||||||| || |  | ||||||||||||||||||||||||    
T  32131118 aatggttaaagaagttaaaagtaacatgtttgcattggtttcaacaacatcttgacttttaaaaagttaaatttatcact 32131197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 487
Target Start/End: Complemental strand, 35675346 - 35675244
Alignment:
Q  385 ttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatc 484  Q
    |||||||||| |||||| |  ||| | |||||  || |||||||||| ||||||||||||| |||||||||||||  | ||||||||||||||||| |||    
T  35675346 ttgctaaccaatgccttaaaggcacttgttaagaaaatcaaaagtagtatgtttgcattgaattcaacaatattttaacttttaaaaagttaaattcatc 35675247  T
Q  485 act 487  Q
    |||    
T  35675246 act 35675244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 480
Target Start/End: Original strand, 15986211 - 15986314
Alignment:
Q  377 tatggctcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagtta 476  Q
    ||||| ||| |||||||  ||||| ||| ||||||||||| |||   |||||||||||||||||||||| ||||||||||||   | ||||||||| |||    
T  15986211 tatgggtctcgctaaccggtgcctgcagggcaatggttaaggaaactaaaagtagaatgtttgcattgaattcaacaatattctgacttttaaaaattta 15986310  T
Q  477 aatt 480  Q
    ||||    
T  15986311 aatt 15986314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 480
Target Start/End: Complemental strand, 51018519 - 51018440
Alignment:
Q  401 tcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatt 480  Q
    |||| ||||||||||||||| | |||||||| || ||| |||||| ||||||||| |||  |||||||||||||||||||    
T  51018519 tcagggcaatggttaaagaaattaaaagtagtatatttacattgaattcaacaatgttttaatttttaaaaagttaaatt 51018440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 480
Target Start/End: Complemental strand, 23691076 - 23690980
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatt 480  Q
    |||||||||||| |||||| |||||||||||||| |||  ||||| ||| || ||| |||||| ||||||||| |||  |||||||||| ||||||||    
T  23691076 tcttgctaaccaatgcctt-agagcaatggttaaggaaaccaaaaatagtatatttacattgaattcaacaatgttttgatttttaaaaggttaaatt 23690980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 483
Target Start/End: Complemental strand, 10100247 - 10100171
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttat 483  Q
    ||||||||||  ||| ||||||||  |||||||||||| ||||||||| ||||  | ||||||||||||||||||||    
T  10100247 caatggttaagaaagccaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttat 10100171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 479
Target Start/End: Complemental strand, 39158464 - 39158388
Alignment:
Q  403 agagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaat 479  Q
    |||||| | ||||| ||| |||||||||| |||||| |||||| || ||||||||||  ||||||||||||||||||    
T  39158464 agagcacttgttaaggaaatcaaaagtagtatgtttacattgaattgaacaatattttaatttttaaaaagttaaat 39158388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 483
Target Start/End: Original strand, 40436072 - 40436132
Alignment:
Q  423 caaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttat 483  Q
    ||||||||| |||||||| ||| ||||||||||||||  || |||||||||||||||||||    
T  40436072 caaaagtagcatgtttgctttggtttcaacaatattttgatatttaaaaagttaaatttat 40436132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 483
Target Start/End: Complemental strand, 53567087 - 53567011
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttat 483  Q
    |||| ||||| |||||||||||||| ||||||||||   ||||||||| ||||  | ||||||||||||||||||||    
T  53567087 caatagttaaggaagtcaaaagtagcatgtttgcatgagtttcaacaacattttaacttttaaaaagttaaatttat 53567011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 480
Target Start/End: Original strand, 20456522 - 20456617
Alignment:
Q  385 ttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatt 480  Q
    |||||||||| |||  | || |||||| |||| ||| |||||||||| ||||||||||||| |||||||||||||  |  |||||||| |||||||    
T  20456522 ttgctaaccagtgctcttagggcaatgattaaggaaatcaaaagtagcatgtttgcattgaattcaacaatattttaacatttaaaaatttaaatt 20456617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 487
Target Start/End: Original strand, 3769803 - 3769868
Alignment:
Q  422 tcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||| | ||||||||||| || ||||||||||  | ||||||||||| ||||||||||||    
T  3769803 tcaaaagtagtaggtttgcattgaatttaacaatattttaacttttaaaaagtcaaatttatcact 3769868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 45088025 - 45088122
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    |||||||||||||||||    | ||||||||||| |||  ||||||||| |||||||||||||||||||||   |||  | ||| ||||| |||||||||    
T  45088025 tcttgctaaccattgcc----gggcaatggttaaggaaaccaaaagtagtatgtttgcattgatttcaaca---ttttgactttcaaaaaattaaattta 45088117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 485
Target Start/End: Complemental strand, 1457663 - 1457591
Alignment:
Q  413 ttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||| ||| |||||||||  | ||||||||||| |||||||||||||  | ||||||||| ||||||||||||    
T  1457663 ttaaggaaatcaaaagtaataagtttgcattgaattcaacaatattttaacttttaaaaaattaaatttatca 1457591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 480
Target Start/End: Original strand, 30617940 - 30617997
Alignment:
Q  423 caaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatt 480  Q
    ||||||||| | | ||||||||  |||||||||||||| | |||||||||||||||||    
T  30617940 caaaagtagtaggattgcattggattcaacaatatttgaacttttaaaaagttaaatt 30617997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 480
Target Start/End: Original strand, 966562 - 966630
Alignment:
Q  412 gttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatt 480  Q
    ||||| ||| |||||||||| |  ||| |||||  |||||||||||||  |||||||||||||||||||    
T  966562 gttaaggaaatcaaaagtagtagtttttcattggattcaacaatattttaatttttaaaaagttaaatt 966630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 5e-26; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 22346392 - 22346288
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||||||| ||  |||||||||| |||| ||||||||| |||||||||||| ||||||||||||||  | ||||||||| |||||||||    
T  22346392 tcttgctaaccattgccttgaggacaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaaattaaattta 22346293  T
Q  483 tcact 487  Q
    |||||    
T  22346292 tcact 22346288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 383 - 485
Target Start/End: Complemental strand, 27209876 - 27209774
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||||| | || ||||||||||| |||| ||||||||| |||||||||||| ||||||||| ||||  | |||||||||||||||||||    
T  27209876 tcttgctaaccattgccctgagggcaatggttaaggaagccaaaagtaggatgtttgcattggtttcaacaacattttaacttttaaaaagttaaattta 27209777  T
Q  483 tca 485  Q
    |||    
T  27209776 tca 27209774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 43433726 - 43433830
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    |||||||||| |||||||| || | ||||||||| |||| ||||||||| ||||||| |||| ||||||||| ||||  |||||||||||||||||||||    
T  43433726 tcttgctaactattgccttgagggtaatggttaaggaagccaaaagtagtatgtttgtattggtttcaacaacattttaatttttaaaaagttaaattta 43433825  T
Q  483 tcact 487  Q
    |||||    
T  43433826 tcact 43433830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 49508888 - 49508784
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    |||||||||| |||||| |||   ||||||||||||||| ||||||||| |||||||||||| |||| |||||||||  | |||||||||||||||||||    
T  49508888 tcttgctaactattgccctcaagacaatggttaaagaagccaaaagtagcatgtttgcattggtttcgacaatattttgacttttaaaaagttaaattta 49508789  T
Q  483 tcact 487  Q
    |||||    
T  49508788 tcact 49508784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 406 - 485
Target Start/End: Complemental strand, 41147610 - 41147531
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||  | ||||||||||||||||| ||||    
T  41147610 gcaatggttaaggaagtcaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaattaatca 41147531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 383 - 486
Target Start/End: Original strand, 47895285 - 47895388
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||| ||||||||| | |||||||||||||||| |||| ||||||||  |||||||||||  ||||||||||||||  |  ||||||||||||||||||    
T  47895285 tcttgttaaccattgtcctcagagcaatggttaaggaagccaaaagtaacatgtttgcattagtttcaacaatattttgacatttaaaaagttaaattta 47895384  T
Q  483 tcac 486  Q
    ||||    
T  47895385 tcac 47895388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 406 - 485
Target Start/End: Complemental strand, 6170683 - 6170604
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||||||||| |||||||||||||  |||||||||||| ||||||||| ||||  | ||||||||||||||||||||||    
T  6170683 gcaatggttaaggaagtcaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatca 6170604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 418 - 487
Target Start/End: Complemental strand, 50295554 - 50295484
Alignment:
Q  418 gaagtcaaaagtagaatgttt-gcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||||||| |||||| |||||||||||||||||||||  | ||||||||||||||||||||||||    
T  50295554 gaagtcaaaagtagcatgttttgcattgatttcaacaatattttgacttttaaaaagttaaatttatcact 50295484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 410 - 487
Target Start/End: Complemental strand, 28277610 - 28277533
Alignment:
Q  410 tggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||| ||| |||||||||  |||||||||||| ||||||||| ||||  ||||||||||||||||||||||||||    
T  28277610 tggttaaggaaatcaaaagtaacatgtttgcattgttttcaacaacattttaatttttaaaaagttaaatttatcact 28277533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 7190630 - 7190526
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||||||| | ||  |||||||||| ||||  |||||||| |||||||||||  ||||||||  ||||  | |||||||||||||||||||    
T  7190630 tcttgctaaccattgcccttaggacaatggttaaggaagctaaaagtagcatgtttgcattagtttcaacaccattttaacttttaaaaagttaaattta 7190531  T
Q  483 tcact 487  Q
    |||||    
T  7190530 tcact 7190526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 410 - 487
Target Start/End: Original strand, 34874545 - 34874622
Alignment:
Q  410 tggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||| |||| ||||||||| |||||||||||| ||||||||| ||||  | ||||||||| ||||||||||||||    
T  34874545 tggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcact 34874622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 485
Target Start/End: Original strand, 45721729 - 45721805
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||||||||| ||| |||||||||| |||||||||||||||| |||   ||||  ||||||||||||||||||||||||    
T  45721729 gcaatggttaaggaaatcaaaagtagcatgtttgcattgattttaac---attttgatttttaaaaagttaaatttatca 45721805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 4940895 - 4940791
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    |||||||||||| || | |||| ||||| ||||| |||  ||||| ||| ||||||| |||| ||| ||||||||||  | |||||||||||||||||||    
T  4940895 tcttgctaaccactgtcctcagggcaatagttaaggaaaccaaaaatagcatgtttgtattggttttaacaatattttgacttttaaaaagttaaattta 4940796  T
Q  483 tcact 487  Q
    |||||    
T  4940795 tcact 4940791  T

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Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 419 - 487
Target Start/End: Complemental strand, 28851028 - 28850961
Alignment:
Q  419 aagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||||| || ||||||||| |||||||||| |||| | ||||||||||||||||||||||||    
T  28851028 aagtcaaaagtagcatatttgcattggtttcaacaatttttg-acttttaaaaagttaaatttatcact 28850961  T

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Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 413 - 485
Target Start/End: Original strand, 33929947 - 33930019
Alignment:
Q  413 ttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||| |||| ||||||||| |||||||||||| ||||||||| ||||  | ||||||||||||||||||||||    
T  33929947 ttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatca 33930019  T

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Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 478
Target Start/End: Original strand, 43168087 - 43168187
Alignment:
Q  378 atggctcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaa 477  Q
    |||| |||||||||||| |||| |||| | ||||||||| ||| |||||||||| || ||| |||||| ||||||||| |||  | ||||||||||||||    
T  43168087 atgggtcttgctaaccagtgccctcagggaaatggttaaggaaatcaaaagtagtatatttacattgaattcaacaatgttttgacttttaaaaagttaa 43168186  T
Q  478 a 478  Q
    |    
T  43168187 a 43168187  T

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Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 485
Target Start/End: Original strand, 11385955 - 11386034
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||||||||||  ||  ||||||||| |||||||||||| ||||||||| ||||  | ||||||||||||||||||||||    
T  11385955 gcaatggttaagaaaaccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatca 11386034  T

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Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 485
Target Start/End: Complemental strand, 47655491 - 47655424
Alignment:
Q  418 gaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||| ||||||||| |||||||||||| ||||||||| ||||  | ||||||||||||||||||||||    
T  47655491 gaaggcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatca 47655424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 410 - 459
Target Start/End: Original strand, 29966800 - 29966849
Alignment:
Q  410 tggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatattt 459  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  29966800 tggttaaggaagtcaaaagtagcatgtttgcattggtttcaacaatattt 29966849  T

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Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 487
Target Start/End: Original strand, 40845253 - 40845306
Alignment:
Q  434 tgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||| ||| ||||||||||||||  ||||||||||||||||||||||||||    
T  40845253 tgtttgctttggtttcaacaatattttgatttttaaaaagttaaatttatcact 40845306  T

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Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 485
Target Start/End: Complemental strand, 42607438 - 42607377
Alignment:
Q  424 aaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||||||| |||||||||||| ||||||||| ||||  | ||||||||||||||||||||||    
T  42607438 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatca 42607377  T

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Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 485
Target Start/End: Original strand, 50154449 - 50154526
Alignment:
Q  408 aatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||||||| |||| ||||||||  |||||||||||| ||||||||| ||||  | |||||||| |||||||||||||    
T  50154449 aatggttaaggaagccaaaagtaacatgtttgcattggtttcaacaacattttaacttttaaaaggttaaatttatca 50154526  T

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Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 52396417 - 52396498
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||| ||| | |||| ||| |||||||||||  |||||| |||||||  | ||||||||||||||||||||||||    
T  52396417 gcaatggttaaggaaattaaaaatagcatgtttgcatttgtttcaataatattttgacttttaaaaagttaaatttatcact 52396498  T

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Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 487
Target Start/End: Complemental strand, 2125838 - 2125758
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||||||||||||||||  ||| ||| |||  ||||| ||| ||||  | ||||||||||||||||||||||||    
T  2125838 caatggttaaagaagtcaaaagtaacatggttgtatttgtttcatcaacattttgacttttaaaaagttaaatttatcact 2125758  T

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Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 486
Target Start/End: Original strand, 24140747 - 24140827
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcac 486  Q
    ||||||||||| |||| ||||| ||| |||||||||||| ||||||||| ||||  | ||| |||||||||| ||||||||    
T  24140747 gcaatggttaaggaagccaaaaatagcatgtttgcattggtttcaacaacattttgactttaaaaaagttaagtttatcac 24140827  T

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Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 485
Target Start/End: Complemental strand, 26469707 - 26469635
Alignment:
Q  413 ttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||| ||||| |||||||| |||||| ||||| |||||| |||||||  | ||||||||||||||||||||||    
T  26469707 ttaaggaagttaaaagtagtatgttttcattggtttcaataatattttgacttttaaaaagttaaatttatca 26469635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 480
Target Start/End: Complemental strand, 44359834 - 44359730
Alignment:
Q  376 ttatggctcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagtt 475  Q
    |||||| |||||||||| | |||| |||| ||||||||||| |||  ||||| ||| || ||| |||||| ||||||||| |||  | ||||||||||||    
T  44359834 ttatgggtcttgctaactagtgccctcagggcaatggttaaggaaaccaaaaatagtatatttacattgaattcaacaatgttttgacttttaaaaagtt 44359735  T
Q  476 aaatt 480  Q
    |||||    
T  44359734 aaatt 44359730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 377 - 480
Target Start/End: Original strand, 14331782 - 14331885
Alignment:
Q  377 tatggctcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagtta 476  Q
    ||||| |||||||||||  |||| |||| ||||||||||| |||  ||||| ||| || ||| |||||| ||||||||| |||  | |||||||||||||    
T  14331782 tatgggtcttgctaaccggtgccctcagggcaatggttaaggaaaccaaaaatagtatatttacattgaattcaacaatgttttgacttttaaaaagtta 14331881  T
Q  477 aatt 480  Q
    ||||    
T  14331882 aatt 14331885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 485
Target Start/End: Original strand, 44286859 - 44286925
Alignment:
Q  419 aagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||| |||||||  |||||||||||| ||| || |||||||  ||||||||||||||||||||||||    
T  44286859 aagttaaaagtaacatgtttgcattggttttaataatattttaatttttaaaaagttaaatttatca 44286925  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 483
Target Start/End: Complemental strand, 932287 - 932212
Alignment:
Q  408 aatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttat 483  Q
    ||||||||| ||||  |||||||| |||||||||||  ||||||||| ||||  | ||||||||| ||||||||||    
T  932287 aatggttaaggaaggtaaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaaattaaatttat 932212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 487
Target Start/End: Original strand, 4656020 - 4656071
Alignment:
Q  436 tttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||  ||||||||| ||||  ||||||||||||||||||||||||||    
T  4656020 tttgcattagtttcaacaacattttaatttttaaaaagttaaatttatcact 4656071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 487
Target Start/End: Original strand, 30222613 - 30222676
Alignment:
Q  425 aaagtagaatgtttgcattgatttcaacaatatttgta-tttttaaaaagttaaatttatcact 487  Q
    ||||||| || ||||||||| ||||||||||||||  | |||||||||| ||||||||||||||    
T  30222613 aaagtagcatatttgcattggtttcaacaatattttaactttttaaaaaattaaatttatcact 30222676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 487
Target Start/End: Original strand, 49901906 - 49901981
Alignment:
Q  412 gttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||| |||| ||||||||  |||||||||||| |||||||||  |||  |  |||||||||||||||||||||||    
T  49901906 gttaaggaagccaaaagtatcatgtttgcattggtttcaacaacgttttaacgtttaaaaagttaaatttatcact 49901981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 433 - 487
Target Start/End: Original strand, 31975488 - 31975542
Alignment:
Q  433 atgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||||  ||| ||||||||||  ||||||||||||||||||||| ||||    
T  31975488 atgtttgcattagttttaacaatattttgatttttaaaaagttaaatttaccact 31975542  T

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Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 387 - 483
Target Start/End: Original strand, 6433499 - 6433595
Alignment:
Q  387 gctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttat 483  Q
    ||||| ||||||| |||||||||||||||| |||| ||||||||| || ||||||||| ||| ||||||||||  | ||||||||||||||||||||    
T  6433499 gctaatcattgccctcagagcaatggttaaggaagacaaaagtagtatctttgcattggttttaacaatattttaacttttaaaaagttaaatttat 6433595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 377 - 485
Target Start/End: Original strand, 4989881 - 4989986
Alignment:
Q  377 tatggctcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagtta 476  Q
    ||||| ||||||||||||||||| |||  ||||||||||| |||||||||||||| |||||||||||| |||||||   ||||  |  ||||||||||||    
T  4989881 tatgggtcttgctaaccattgccctcatggcaatggttaaggaagtcaaaagtagcatgtttgcattggtttcaac---attttgacatttaaaaagtta 4989977  T
Q  477 aatttatca 485  Q
    |||||||||    
T  4989978 aatttatca 4989986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 401 - 487
Target Start/End: Original strand, 10694776 - 10694862
Alignment:
Q  401 tcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||||||||| |||| ||||||||  || ||||||||||||||||||| ||||  | ||||||||||||||||||||||||    
T  10694776 tcagagcaatggttaaggaagccaaaagtatcatatttgcattgatttcaacaacattttgacttttaaaaagttaaatttatcact 10694862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 410 - 487
Target Start/End: Complemental strand, 19389441 - 19389364
Alignment:
Q  410 tggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||| ||| |||||||||| |||||||||||| ||||||| ||||||  | ||||||||||||||||||||||||    
T  19389441 tggttaaggaaatcaaaagtagcatgtttgcattgttttcaacgatattttgacttttaaaaagttaaatttatcact 19389364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 37433240 - 37433320
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||| |||| ||||| |||||||| |||||||||||| ||||||||| |||| ||  |||||||||||||||||||||||    
T  37433240 gcaatgattaaggaagttaaaagtagtatgtttgcattggtttcaacaacattt-taactttaaaaagttaaatttatcact 37433320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 8018734 - 8018816
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgttt-gcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    ||||||||||| |||| ||||||||| |||||| |||||  ||| ||||| ||||  ||||||||||||||||||||||||||    
T  8018734 gcaatggttaaggaagccaaaagtagtatgttttgcattagttttaacaacattttgatttttaaaaagttaaatttatcact 8018816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 413 - 487
Target Start/End: Complemental strand, 21016185 - 21016111
Alignment:
Q  413 ttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||| |||||||||||||| ||||||||||||  |||||||| ||||  | |||||||||||||||| |||||||    
T  21016185 ttaaggaagtcaaaagtagcatgtttgcattggcttcaacaacattttgacttttaaaaagttaaatctatcact 21016111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 433 - 487
Target Start/End: Complemental strand, 25249449 - 25249395
Alignment:
Q  433 atgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||||| ||||||||||||||  | ||||||||||||||||||||||||    
T  25249449 atgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcact 25249395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 420 - 485
Target Start/End: Complemental strand, 33741595 - 33741530
Alignment:
Q  420 agtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||||||||||  || ||||||||| ||||||||||||||  | ||||||||||||||||||||||    
T  33741595 agtcaaaagtaacatatttgcattggtttcaacaatattttaacttttaaaaagttaaatttatca 33741530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 487
Target Start/End: Complemental strand, 34714044 - 34713975
Alignment:
Q  418 gaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||||||| |||||||||||| ||||||||| ||||  | |||||| |||| ||||||||||||    
T  34714044 gaagtcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaagaagtgaaatttatcact 34713975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 26195490 - 26195427
Alignment:
Q  424 aaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||| ||||||| |||| ||||||||| ||||  | ||||||||||||||||||||||||    
T  26195490 aaaagtagcatgtttgtattggtttcaacaacattttaacttttaaaaagttaaatttatcact 26195427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 487
Target Start/End: Original strand, 6939159 - 6939213
Alignment:
Q  433 atgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||||||| ||||||||| ||||  | ||||||||||||||||||||||||    
T  6939159 atgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcact 6939213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 485
Target Start/End: Original strand, 45337995 - 45338057
Alignment:
Q  423 caaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||||||| |||||||||||| | |||| || ||||  ||||||||||||||||||||||||    
T  45337995 caaaagtagtatgtttgcattggtctcaataacattttgatttttaaaaagttaaatttatca 45338057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 484
Target Start/End: Original strand, 26672741 - 26672842
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||| ||||||| | || ||||||||||| ||| |||||| ||  ||||||  |||| ||||||||| ||||  | ||||||||| |||||||||    
T  26672741 tcttgctaatcattgccctgagggcaatggttaaggaaatcaaaaatacgatgtttatattggtttcaacaacattttgacttttaaaaaattaaattta 26672840  T
Q  483 tc 484  Q
    ||    
T  26672841 tc 26672842  T

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Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 459
Target Start/End: Original strand, 3174407 - 3174483
Alignment:
Q  383 tcttgctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatattt 459  Q
    ||||||||||||||||| |||  ||||  ||||| |||| ||||||||| ||||||| |||| ||||||||| ||||    
T  3174407 tcttgctaaccattgccctcatggcaacagttaaggaagccaaaagtagcatgtttgtattggtttcaacaacattt 3174483  T

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Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 487
Target Start/End: Original strand, 18068953 - 18069017
Alignment:
Q  423 caaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||| ||||||||||||  ||||||||| ||||  |  |||||||||||||||||||||||    
T  18068953 caaaagtataatgtttgcattagtttcaacaacattttgacctttaaaaagttaaatttatcact 18069017  T

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Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 485
Target Start/End: Original strand, 26892760 - 26892839
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    |||||||| ||| ||||||||| ||| ||||||  |||  |||||| |||||||  | ||||||||||||||||||||||    
T  26892760 gcaatggtcaaataagtcaaaattagtatgtttatattagtttcaataatattttaacttttaaaaagttaaatttatca 26892839  T

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Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 454
Target Start/End: Original strand, 44874308 - 44874355
Alignment:
Q  407 caatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaa 454  Q
    |||||||||| |||| ||||||||| |||||||||||| |||||||||    
T  44874308 caatggttaaggaagacaaaagtagcatgtttgcattggtttcaacaa 44874355  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 480
Target Start/End: Original strand, 38869960 - 38870052
Alignment:
Q  388 ctaaccattgccttcagagcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatt 480  Q
    ||||||| |||| ||||||||||||| || |||  ||||||||| || ||| |||||| |||| ||||||||  | |||||||| ||| ||||    
T  38869960 ctaaccagtgccctcagagcaatggtcaaggaaaccaaaagtagtatatttacattgaattcatcaatattttgacttttaaaatgttgaatt 38870052  T

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Target: scaffold0062 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 406 - 485
Target Start/End: Complemental strand, 16906 - 16827
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||||||||||||  | ||||||||||||| ||||||||    
T  16906 gcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttacatttatca 16827  T

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Target: scaffold0062; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 406 - 485
Target Start/End: Complemental strand, 27074 - 26995
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||||||||||||  | ||||||||||||| ||||||||    
T  27074 gcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttacatttatca 26995  T

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Target: scaffold0062; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 406 - 485
Target Start/End: Complemental strand, 37240 - 37161
Alignment:
Q  406 gcaatggttaaagaagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatca 485  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||||||||||||  | ||||||||||||| ||||||||    
T  37240 gcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttacatttatca 37161  T

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Target: scaffold0809 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 419 - 482
Target Start/End: Complemental strand, 4768 - 4705
Alignment:
Q  419 aagtcaaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaattta 482  Q
    ||||||||||||| ||||||||||| |||||||||| || |  | |||||||||||||||||||    
T  4768 aagtcaaaagtagcatgtttgcattaatttcaacaacatattgacttttaaaaagttaaattta 4705  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 392249 - 392186
Alignment:
Q  424 aaaagtagaatgtttgcattgatttcaacaatatttgtatttttaaaaagttaaatttatcact 487  Q
    |||||||| |||||||||| | ||||||||| ||||  | ||||||||||||||||||||||||    
T  392249 aaaagtagcatgtttgcatcggtttcaacaacattttgacttttaaaaagttaaatttatcact 392186  T

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