View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13763_high_68 (Length: 443)

Name: NF13763_high_68
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13763_high_68
NF13763_high_68
[»] scaffold0009 (2 HSPs)
scaffold0009 (307-435)||(34767-34895)
scaffold0009 (199-250)||(41127-41178)
[»] chr4 (19 HSPs)
chr4 (322-435)||(52006999-52007112)
chr4 (322-431)||(19820272-19820381)
chr4 (322-431)||(19827034-19827143)
chr4 (322-435)||(24044609-24044722)
chr4 (322-426)||(24150221-24150325)
chr4 (322-426)||(48415998-48416102)
chr4 (322-419)||(39501204-39501301)
chr4 (322-419)||(52531404-52531501)
chr4 (319-408)||(53094074-53094163)
chr4 (322-426)||(48637054-48637158)
chr4 (319-406)||(8875227-8875314)
chr4 (357-435)||(15430357-15430435)
chr4 (357-435)||(15436971-15437049)
chr4 (322-435)||(3718664-3718777)
chr4 (322-435)||(27691612-27691725)
chr4 (319-426)||(25961607-25961714)
chr4 (321-435)||(18673538-18673652)
chr4 (322-435)||(40794542-40794655)
chr4 (357-409)||(12782471-12782523)
[»] chr3 (26 HSPs)
chr3 (322-435)||(3840142-3840255)
chr3 (322-435)||(29344330-29344443)
chr3 (322-435)||(20729102-20729215)
chr3 (321-426)||(43809214-43809319)
chr3 (322-426)||(25584322-25584426)
chr3 (321-435)||(22417288-22417402)
chr3 (321-435)||(32367583-32367697)
chr3 (322-419)||(49743375-49743472)
chr3 (322-414)||(2873211-2873303)
chr3 (322-426)||(30690370-30690474)
chr3 (321-435)||(11784391-11784505)
chr3 (322-440)||(16243495-16243613)
chr3 (357-414)||(2775129-2775186)
chr3 (357-414)||(2778372-2778429)
chr3 (322-435)||(32287779-32287892)
chr3 (357-426)||(43926470-43926539)
chr3 (357-426)||(54723376-54723445)
chr3 (384-435)||(22010996-22011047)
chr3 (321-435)||(10881106-10881220)
chr3 (321-431)||(17141038-17141148)
chr3 (322-435)||(7486196-7486309)
chr3 (321-426)||(12561688-12561793)
chr3 (322-435)||(45896006-45896119)
chr3 (345-406)||(46884608-46884669)
chr3 (321-426)||(52988040-52988145)
chr3 (322-406)||(19301960-19302044)
[»] chr6 (16 HSPs)
chr6 (323-435)||(6512795-6512907)
chr6 (322-435)||(10289515-10289628)
chr6 (322-431)||(28665732-28665841)
chr6 (322-426)||(15543561-15543665)
chr6 (321-435)||(18856492-18856606)
chr6 (322-419)||(2378788-2378885)
chr6 (321-406)||(26898336-26898421)
chr6 (322-419)||(30655002-30655099)
chr6 (322-426)||(3597250-3597354)
chr6 (322-426)||(26942903-26943007)
chr6 (328-419)||(11188390-11188481)
chr6 (321-419)||(4512031-4512129)
chr6 (321-435)||(24399722-24399836)
chr6 (321-435)||(24409842-24409956)
chr6 (357-419)||(11401815-11401877)
chr6 (322-406)||(13004760-13004844)
[»] chr2 (21 HSPs)
chr2 (319-435)||(30926070-30926186)
chr2 (322-435)||(9189122-9189235)
chr2 (322-435)||(42369180-42369293)
chr2 (323-435)||(13972364-13972476)
chr2 (322-426)||(24234627-24234731)
chr2 (322-426)||(25960158-25960262)
chr2 (321-435)||(3874812-3874926)
chr2 (321-435)||(17876479-17876593)
chr2 (328-426)||(31586381-31586479)
chr2 (321-406)||(16178679-16178764)
chr2 (322-435)||(43723224-43723337)
chr2 (322-426)||(24237899-24238003)
chr2 (322-426)||(37280146-37280250)
chr2 (322-409)||(43208359-43208446)
chr2 (322-435)||(9185893-9186006)
chr2 (321-406)||(12219347-12219432)
chr2 (322-426)||(8888167-8888271)
chr2 (322-409)||(22020617-22020704)
chr2 (357-419)||(11348400-11348462)
chr2 (321-435)||(16791227-16791341)
chr2 (321-426)||(1386890-1386995)
[»] chr1 (10 HSPs)
chr1 (322-435)||(41058770-41058883)
chr1 (321-435)||(49853545-49853659)
chr1 (327-426)||(23022397-23022496)
chr1 (322-424)||(45940969-45941071)
chr1 (322-435)||(20398395-20398508)
chr1 (321-435)||(2405052-2405166)
chr1 (322-440)||(21018934-21019052)
chr1 (357-426)||(28110608-28110677)
chr1 (321-435)||(3797293-3797407)
chr1 (319-409)||(34732824-34732914)
[»] chr7 (14 HSPs)
chr7 (323-435)||(13809987-13810099)
chr7 (357-435)||(4861341-4861419)
chr7 (319-429)||(18563003-18563113)
chr7 (322-435)||(9865200-9865313)
chr7 (322-409)||(4596482-4596569)
chr7 (322-435)||(4695052-4695165)
chr7 (322-435)||(17730343-17730456)
chr7 (322-426)||(23225379-23225483)
chr7 (322-426)||(23234532-23234636)
chr7 (322-409)||(20593832-20593919)
chr7 (321-435)||(9080705-9080819)
chr7 (322-409)||(9405811-9405898)
chr7 (321-435)||(20081190-20081304)
chr7 (365-426)||(11950930-11950991)
[»] chr5 (18 HSPs)
chr5 (322-436)||(30065882-30065996)
chr5 (322-426)||(34831313-34831417)
chr5 (319-433)||(18239961-18240075)
chr5 (322-435)||(7270557-7270670)
chr5 (321-426)||(40582799-40582904)
chr5 (322-435)||(41877233-41877346)
chr5 (322-426)||(26753170-26753274)
chr5 (321-429)||(26907922-26908030)
chr5 (328-435)||(4099996-4100103)
chr5 (321-435)||(12087499-12087613)
chr5 (321-435)||(17747981-17748095)
chr5 (322-435)||(33551662-33551775)
chr5 (322-435)||(2836915-2837028)
chr5 (319-435)||(18952234-18952350)
chr5 (321-426)||(26292341-26292446)
chr5 (322-426)||(41306995-41307099)
chr5 (321-435)||(34143681-34143795)
chr5 (321-426)||(12058959-12059064)
[»] scaffold0427 (1 HSPs)
scaffold0427 (322-426)||(4257-4361)
[»] scaffold0757 (1 HSPs)
scaffold0757 (322-435)||(4893-5006)
[»] chr8 (3 HSPs)
chr8 (322-431)||(38248868-38248977)
chr8 (319-404)||(21280233-21280318)
chr8 (322-426)||(16953323-16953427)
[»] scaffold0250 (1 HSPs)
scaffold0250 (322-426)||(18945-19049)
[»] scaffold0520 (1 HSPs)
scaffold0520 (322-428)||(4448-4554)
[»] scaffold0056 (1 HSPs)
scaffold0056 (321-419)||(67992-68090)
[»] scaffold0024 (1 HSPs)
scaffold0024 (322-428)||(84788-84894)
[»] scaffold1785 (1 HSPs)
scaffold1785 (321-406)||(865-950)
[»] scaffold0807 (1 HSPs)
scaffold0807 (345-406)||(2564-2625)
[»] scaffold0084 (1 HSPs)
scaffold0084 (321-426)||(18845-18950)
[»] scaffold0035 (1 HSPs)
scaffold0035 (321-406)||(63475-63560)


Alignment Details
Target: scaffold0009 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 307 - 435
Target Start/End: Original strand, 34767 - 34895
Alignment:
Q  307 gatattgagaagataggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctct 406  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34767 gatattgagaagataggaattaaaacatacatgaactggtaaaaggattgagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctct 34866  T
Q  407 ctctaaattgtaatccttgttttcagaat 435  Q
    |||||||| |||||||||||||| |||||    
T  34867 ctctaaatcgtaatccttgtttttagaat 34895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 41127 - 41178
Alignment:
Q  199 aaaataattcctcgagttaccaccgatcgatgagtacaatcacggcgtatta 250  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  41127 aaaataattcctcaagttaccaccgatcgatgaatacaatcacggcgtatta 41178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 435
Target Start/End: Original strand, 52006999 - 52007112
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| || |||||| |    
T  52006999 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaatttgtaacc 52007098  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  52007099 cttgttttcagaat 52007112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 431
Target Start/End: Complemental strand, 19820381 - 19820272
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  ||||||| || ||||||| ||||| |||| |||||| |||||||||| | |||||| ||||||| || | |||| |    
T  19820381 ggaatcaaaacatacatgaactgataaaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttactctctccaattcgtaacc 19820282  T
Q  422 cttgttttca 431  Q
    ||||||||||    
T  19820281 cttgttttca 19820272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 431
Target Start/End: Complemental strand, 19827143 - 19827034
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  ||||||| || ||||||| ||||| |||| |||||  |||||||||| | |||||||||||||| || | |||| |    
T  19827143 ggaatcaaaacatacatgaactgataaaaggttgaagaaatcgccctcctagccgtcttgaggtctcaaaatcgcactttgctctctccaattcgtaacc 19827044  T
Q  422 cttgttttca 431  Q
    ||||||||||    
T  19827043 cttgttttca 19827034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 435
Target Start/End: Original strand, 24044609 - 24044722
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| ||||  ||||| |||||||||| | |||||||||||||| || | |||| |    
T  24044609 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccatctttaggtctcaaaatcgcactttgctctctccaattcgtaacc 24044708  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  24044709 cttgttttcagaat 24044722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 426
Target Start/End: Complemental strand, 24150325 - 24150221
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    |||||||||||||| || ||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| |    
T  24150325 ggaattaaaacatacataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacc 24150226  T
Q  422 cttgt 426  Q
    |||||    
T  24150225 cttgt 24150221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 426
Target Start/End: Original strand, 48415998 - 48416102
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| |    
T  48415998 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacc 48416097  T
Q  422 cttgt 426  Q
    |||||    
T  48416098 cttgt 48416102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 419
Target Start/End: Complemental strand, 39501301 - 39501204
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaa 419  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| ||||    
T  39501301 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaa 39501204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 419
Target Start/End: Original strand, 52531404 - 52531501
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaa 419  Q
    |||||||||||||| || ||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| ||||    
T  52531404 ggaattaaaacatacataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaa 52531501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 408
Target Start/End: Complemental strand, 53094163 - 53094074
Alignment:
Q  319 ataggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctct 408  Q
    ||||||||||||||||| |||||||  || |||| || ||||||| ||||| |||| |||||  |||||||||| | |||||||||||||    
T  53094163 ataggaattaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagctgtcttgaggtctcaaaatcacactttgctctct 53094074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 426
Target Start/End: Complemental strand, 48637158 - 48637054
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    |||||||||||||| || ||||  || |||| || ||||||||||||| |||| |||||| ||||||||||   |||||||| ||||| |||| |||| |    
T  48637158 ggaattaaaacatacataaactgatagaaggttgaagaaatcaccctcctagccgtctttaggtctcaaaattgcactttgcactctccaaatcgtaacc 48637059  T
Q  422 cttgt 426  Q
    |||||    
T  48637058 cttgt 48637054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 406
Target Start/End: Original strand, 8875227 - 8875314
Alignment:
Q  319 ataggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctct 406  Q
    ||||||||||||||||| |||||||  || |||| || |||||||| |||| ||||  ||||| |||||||||| | |||||||||||    
T  8875227 ataggaattaaaacatacatgaactaatagaaggttgaagaaatcatcctcctagccatctttaggtctcaaaatcgcactttgctct 8875314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 435
Target Start/End: Original strand, 15430357 - 15430435
Alignment:
Q  357 agaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatccttgttttcagaat 435  Q
    ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| || | |||| |||||| ||||||||    
T  15430357 agaaatcgccctcctagctgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacccttgtcttcagaat 15430435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 435
Target Start/End: Original strand, 15436971 - 15437049
Alignment:
Q  357 agaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatccttgttttcagaat 435  Q
    ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| || | |||| |||||| ||||||||    
T  15436971 agaaatcgccctcctagctgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacccttgtcttcagaat 15437049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 3718777 - 3718664
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| ||||| |  || |||| || ||||||| |||||  ||| |||||| |||||||||| | || ||||||||||| || | |||| |    
T  3718777 ggaatcaaaacatacatgaattgatagaaggttgaagaaatctccctccgagccgtctttaggtctcaaaatcacattttgctctctccaattcgtaacc 3718678  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  3718677 cttgttttcagaat 3718664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 435
Target Start/End: Original strand, 27691612 - 27691725
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || || | || ||||||| ||||| ||||  ||||| |||||||||| | |||||||||||||| || | || | |    
T  27691612 ggaatcaaaacatacatgaactgatagaatgttgaagaaatcgccctcctagccttctttaggtctcaaaatcgcactttgctctctccaattcgtcacc 27691711  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  27691712 cttgttttcagaat 27691725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 426
Target Start/End: Complemental strand, 25961714 - 25961607
Alignment:
Q  319 ataggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgta 418  Q
    |||||||| || ||||| ||||||| |||||||  || ||||||| ||||  | || ||||| | ||||||||| | |||||||||||||| |||| |||    
T  25961714 ataggaatcaatacatacatgaactggtaaaagagtgaagaaatctcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctcaaaatcgta 25961615  T
Q  419 atccttgt 426  Q
    | ||||||    
T  25961614 acccttgt 25961607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 435
Target Start/End: Original strand, 18673538 - 18673652
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  | || ||||| | ||||||||| | |||||||||||||| |||| ||||     
T  18673538 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaac 18673637  T
Q  421 ccttgttttcagaat 435  Q
    |  ||||||||||||    
T  18673638 ctctgttttcagaat 18673652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 40794655 - 40794542
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || |||| || ||||| |||| || ||| |||||||||| | |||||||||||||| || | ||||      
T  40794655 ggaatcaaaacatacatgaactgatagaaggttgaagaattcgccctcctagccgtttttaggtctcaaaatcgcactttgctctctccaattcgtaaca 40794556  T
Q  422 cttgttttcagaat 435  Q
     |||||||||||||    
T  40794555 tttgttttcagaat 40794542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 409
Target Start/End: Complemental strand, 12782523 - 12782471
Alignment:
Q  357 agaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctc 409  Q
    ||||||| ||||| |||| |||||| |||||||||| | ||||||||||||||    
T  12782523 agaaatcgccctcctagctgtctttaggtctcaaaatcgcactttgctctctc 12782471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 3840255 - 3840142
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| |    
T  3840255 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacc 3840156  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  3840155 cttgttttcagaat 3840142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 322 - 435
Target Start/End: Original strand, 29344330 - 29344443
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| || | |||| |    
T  29344330 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagctgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacc 29344429  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  29344430 cttgttttcagaat 29344443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 435
Target Start/End: Original strand, 20729102 - 20729215
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || | ||||| ||||| |||| |||||| |||||||||| | |||||||||||||| || | |||| |    
T  20729102 ggaatcaaaacatacatgaactgatagaaggttgaaaaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacc 20729201  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  20729202 cttgttttcagaat 20729215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 426
Target Start/End: Complemental strand, 43809319 - 43809214
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||||||||||||||  |||| | ||||||||| | |||||||||||||| |||| ||||     
T  43809319 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcaccctcatagccatcttgtagtctcaaaatcgcactttgctctctccaaatcgtaac 43809220  T
Q  421 ccttgt 426  Q
    ||||||    
T  43809219 ccttgt 43809214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 426
Target Start/End: Complemental strand, 25584426 - 25584322
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| |    
T  25584426 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcacactttgctctctccaaatcgtaacc 25584327  T
Q  422 cttgt 426  Q
    |||||    
T  25584326 cttgt 25584322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 435
Target Start/End: Original strand, 22417288 - 22417402
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  | || ||||| | ||||||||| | |||||||||||||| |||| ||||     
T  22417288 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaac 22417387  T
Q  421 ccttgttttcagaat 435  Q
    |||||||||||||||    
T  22417388 ccttgttttcagaat 22417402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 435
Target Start/End: Original strand, 32367583 - 32367697
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  | || ||||| | ||||||||| | |||||||||||||| |||| ||||     
T  32367583 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaac 32367682  T
Q  421 ccttgttttcagaat 435  Q
    |||||||||||||||    
T  32367683 ccttgttttcagaat 32367697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 419
Target Start/End: Original strand, 49743375 - 49743472
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaa 419  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| ||||    
T  49743375 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaa 49743472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 414
Target Start/End: Complemental strand, 2873303 - 2873211
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaat 414  Q
    |||||||||||||| || ||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| ||||    
T  2873303 ggaattaaaacatacataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaat 2873211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 426
Target Start/End: Complemental strand, 30690474 - 30690370
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || |||||||||| || |||| |||||| |||||||||| | |||||||||||||| || | |||| |    
T  30690474 ggaatcaaaacatacatgaactaatagaaggttgaagaaatcaccatcctagccgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacc 30690375  T
Q  422 cttgt 426  Q
    |||||    
T  30690374 cttgt 30690370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 11784505 - 11784391
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctct-ctctaaattgtaa 419  Q
    ||||||||| ||||| ||||||| |||||||  || ||||||| ||||  |||| ||||| | ||||||||| | ||||||||||| ||| |||||||||    
T  11784505 aggaattaatacatacatgaactggtaaaagagtgaagaaatcgcccttctagccgtcttgtagtctcaaaatcacactttgctctgctc-aaattgtaa 11784407  T
Q  420 tccttgttttcagaat 435  Q
     |||||| ||||||||    
T  11784406 cccttgtcttcagaat 11784391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 440
Target Start/End: Complemental strand, 16243613 - 16243495
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| ||||  ||||| |||||||||  | |||||||||||||| || | |||| |    
T  16243613 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcgtagccatctttaggtctcaaagtcgcactttgctctctccaattcgtaacc 16243514  T
Q  422 cttgttttcagaattatct 440  Q
    ||||||| |||||| ||||    
T  16243513 cttgtttacagaataatct 16243495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 414
Target Start/End: Complemental strand, 2775186 - 2775129
Alignment:
Q  357 agaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaat 414  Q
    ||||||| ||||| |||| ||||||||||||||||| | |||||||||||||| ||||    
T  2775186 agaaatcgccctcctagccgtcttttggtctcaaaatcgcactttgctctctccaaat 2775129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 414
Target Start/End: Complemental strand, 2778429 - 2778372
Alignment:
Q  357 agaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaat 414  Q
    ||||||| ||||| |||| ||||||||||||||||| | |||||||||||||| ||||    
T  2778429 agaaatcgccctcctagccgtcttttggtctcaaaatcgcactttgctctctccaaat 2778372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 435
Target Start/End: Original strand, 32287779 - 32287892
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    |||||||||||||| |||||||  || |||| || |||| |  ||||  |||| |||||| |||||||||| | |||||||||||||| || |  ||| |    
T  32287779 ggaattaaaacatacatgaactgatagaaggttgaagaatttgcccttctagccgtctttaggtctcaaaatcgcactttgctctctccaattcataacc 32287878  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  32287879 cttgttttcagaat 32287892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 426
Target Start/End: Complemental strand, 43926539 - 43926470
Alignment:
Q  357 agaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatccttgt 426  Q
    ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| ||||||    
T  43926539 agaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgt 43926470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 426
Target Start/End: Complemental strand, 54723445 - 54723376
Alignment:
Q  357 agaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatccttgt 426  Q
    ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| ||||||    
T  54723445 agaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgt 54723376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 435
Target Start/End: Complemental strand, 22011047 - 22010996
Alignment:
Q  384 gtctcaaaaactcactttgctctctctaaattgtaatccttgttttcagaat 435  Q
    ||||||||| | |||||||||||||| |||| |||| |||||||||||||||    
T  22011047 gtctcaaaatcgcactttgctctctccaaatcgtaacccttgttttcagaat 22010996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 10881220 - 10881106
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  | || ||||| | |||||||||   || ||||||||||| |||| ||||     
T  10881220 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcccttcttgccgtcttgtagtctcaaaatggcattttgctctctccaaatcgtaac 10881121  T
Q  421 ccttgttttcagaat 435  Q
    |||||||||||||||    
T  10881120 ccttgttttcagaat 10881106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 431
Target Start/End: Complemental strand, 17141148 - 17141038
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  |||  ||||| | ||||||||| | ||||||| |||||| |||| ||||     
T  17141148 aggaatcaatacatacatgaactagtaaaagactgaagaaatcgcccttctagtcgtcttgtagtctcaaaatcacactttgttctctccaaatcgtaac 17141049  T
Q  421 ccttgttttca 431  Q
    |||||||||||    
T  17141048 ccttgttttca 17141038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 7486309 - 7486196
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    |||||||||||||| |  ||||  || |||| || ||||||| ||||| ||||  ||||  |||||| ||| | ||||| |||||||| |||| |||| |    
T  7486309 ggaattaaaacatacacaaactgatagaaggttgaagaaatcgccctcctagccatcttgaggtctccaaatcgcacttggctctctccaaatcgtaacc 7486210  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  7486209 cttgttttcagaat 7486196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 426
Target Start/End: Original strand, 12561688 - 12561793
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  | || ||||| | ||||||||| | |||||||||||||| |||| ||||     
T  12561688 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctcaaaatcgtaac 12561787  T
Q  421 ccttgt 426  Q
    ||||||    
T  12561788 ccttgt 12561793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 45896119 - 45896006
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    |||||||||||||| |  ||||  || |||| || ||||||| ||||| |||| |||||  ||||||||||   ||||| |||||||| ||||  ||| |    
T  45896119 ggaattaaaacatacacaaactgatagaaggttgaagaaatcgccctcctagccgtcttgaggtctcaaaattgcacttggctctctccaaatcataacc 45896020  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  45896019 cttgttttcagaat 45896006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 46884669 - 46884608
Alignment:
Q  345 gtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctct 406  Q
    ||||||||||| ||||||| ||||| |||| ||||| | ||||||||| | |||||||||||    
T  46884669 gtaaaaggatgaagaaatcgccctcctagccgtcttgtagtctcaaaatcgcactttgctct 46884608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 426
Target Start/End: Complemental strand, 52988145 - 52988040
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  | || ||||| | ||||||||| | |||||||||||||| |||| ||||     
T  52988145 aggaatcaatacatacatgaactggtaaaagagtgaagaaatctcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctcaaaatcgtaac 52988046  T
Q  421 ccttgt 426  Q
    ||||||    
T  52988045 ccttgt 52988040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 406
Target Start/End: Original strand, 19301960 - 19302044
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctct 406  Q
    ||||| |||| ||| ||||||| |||||||| || ||||||| ||||||||||   ||| | ||||||||| | |||||||||||    
T  19301960 ggaatcaaaatatacatgaactggtaaaaggttgaagaaatcgccctcatagccaccttgtagtctcaaaatcgcactttgctct 19302044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 7e-19; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 323 - 435
Target Start/End: Complemental strand, 6512907 - 6512795
Alignment:
Q  323 gaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatcc 422  Q
    ||||||||||||| |||||||  || |||| || ||||||| || || |||| |||||| |||||||||| |||||||||||||||| |||| |||| ||    
T  6512907 gaattaaaacatacatgaactgatagaaggttgaagaaatcgccttcctagccgtctttaggtctcaaaatctcactttgctctctccaaatcgtaaccc 6512808  T
Q  423 ttgttttcagaat 435  Q
    |||| ||||||||    
T  6512807 ttgtcttcagaat 6512795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 10289628 - 10289515
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | ||||| |||||||| |||| |||| |    
T  10289628 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcacttggctctctccaaatcgtaacc 10289529  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  10289528 cttgttttcagaat 10289515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 431
Target Start/End: Original strand, 28665732 - 28665841
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| || | |||| |    
T  28665732 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacc 28665831  T
Q  422 cttgttttca 431  Q
    ||||||||||    
T  28665832 cttgttttca 28665841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 426
Target Start/End: Complemental strand, 15543665 - 15543561
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| |    
T  15543665 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacc 15543566  T
Q  422 cttgt 426  Q
    |||||    
T  15543565 cttgt 15543561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 435
Target Start/End: Original strand, 18856492 - 18856606
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  | || ||||| | ||||||||| | |||||||||||||| |||| ||||     
T  18856492 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaac 18856591  T
Q  421 ccttgttttcagaat 435  Q
    |||||||||||||||    
T  18856592 ccttgttttcagaat 18856606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 419
Target Start/End: Complemental strand, 2378885 - 2378788
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaa 419  Q
    |||||||||||||| || ||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| ||||    
T  2378885 ggaattaaaacatacataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaa 2378788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 406
Target Start/End: Original strand, 26898336 - 26898421
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctct 406  Q
    |||||| || ||||| ||||||  ||||||||||| ||||||||||||| |||| ||||| | ||||||||| | |||||||||||    
T  26898336 aggaatcaatacatacatgaacatgtaaaaggatgaagaaatcaccctcctagccgtcttgtagtctcaaaatcacactttgctct 26898421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 419
Target Start/End: Complemental strand, 30655099 - 30655002
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaa 419  Q
    |||||||||||||| || ||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| ||||    
T  30655099 ggaattaaaacatacataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaa 30655002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 426
Target Start/End: Original strand, 3597250 - 3597354
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| | ||||  |||||||| |  ||||||| |||||  ||| |||||| |||||||||| | |||||||||||||| ||||||||| |    
T  3597250 ggaatcaaaacataaacgaaccggtaaaaggtttaagaaatcgccctcccagccgtctttaggtctcaaaatcgcactttgctctctccaaattgtaacc 3597349  T
Q  422 cttgt 426  Q
    |||||    
T  3597350 cttgt 3597354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 426
Target Start/End: Original strand, 26942903 - 26943007
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    |||||||||||||| || ||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||| ||||||| |||| |||| |    
T  26942903 ggaattaaaacatacataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcacttttctctctccaaatcgtaacc 26943002  T
Q  422 cttgt 426  Q
    |||||    
T  26943003 cttgt 26943007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 419
Target Start/End: Original strand, 11188390 - 11188481
Alignment:
Q  328 aaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaa 419  Q
    |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| ||||    
T  11188390 aaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaa 11188481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 419
Target Start/End: Complemental strand, 4512129 - 4512031
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaa 419  Q
    |||||| || ||||| ||||||  ||||||||||| ||||||| ||||| ||||  |||| | ||||||||| | |||||||||||||  |||||||||    
T  4512129 aggaatcaatacatacatgaacaggtaaaaggatgaagaaatcgccctcctagccatcttgtagtctcaaaatcgcactttgctctcttcaaattgtaa 4512031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 24399836 - 24399722
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| || |||| |||||||| || ||||||| ||||  ||||  |||| | || |||||| | |||||||||||||| |||| ||||     
T  24399836 aggaatcaatacatacattaactggtaaaaggttgaagaaatcgcccttctagccatcttgtagtgtcaaaatcgcactttgctctctccaaatcgtaac 24399737  T
Q  421 ccttgttttcagaat 435  Q
    |||||||||||||||    
T  24399736 ccttgttttcagaat 24399722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 24409956 - 24409842
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| || |||| |||||||| || ||||||| ||||  ||||  |||| | || |||||| | |||||||||||||| |||| ||||     
T  24409956 aggaatcaatacatacattaactggtaaaaggttgaagaaatcgcccttctagccatcttgtagtgtcaaaatcgcactttgctctctccaaatcgtaac 24409857  T
Q  421 ccttgttttcagaat 435  Q
    |||||||||||||||    
T  24409856 ccttgttttcagaat 24409842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 11401877 - 11401815
Alignment:
Q  357 agaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaa 419  Q
    ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| ||||    
T  11401877 agaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaa 11401815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 406
Target Start/End: Complemental strand, 13004844 - 13004760
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctct 406  Q
    |||||||||||||| |||||||  || |||| || ||||||| ||||| ||||  ||||| |||||||||| |  ||||||||||    
T  13004844 ggaattaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccttctttaggtctcaaaatcgtactttgctct 13004760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 7e-19; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 435
Target Start/End: Complemental strand, 30926186 - 30926070
Alignment:
Q  319 ataggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgta 418  Q
    ||||||||||||||||| |||||||  ||||| | || | ||||| ||||| ||| |||||| ||||||||||| | |||||||||||||| |||| |||    
T  30926186 ataggaattaaaacatacatgaactgataaaaagttgaaaaaatcgccctcctagtagtcttctggtctcaaaatcacactttgctctctccaaatcgta 30926087  T
Q  419 atccttgttttcagaat 435  Q
    |  ||||||||||||||    
T  30926086 acacttgttttcagaat 30926070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 435
Target Start/End: Original strand, 9189122 - 9189235
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| |    
T  9189122 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacc 9189221  T
Q  422 cttgttttcagaat 435  Q
    ||||| || |||||    
T  9189222 cttgtctttagaat 9189235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 435
Target Start/End: Original strand, 42369180 - 42369293
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    |||||||||||||| || || |  || |||| || ||||||| ||||| |||| |||||| ||||||||||   |||||||||||||| |||| |||| |    
T  42369180 ggaattaaaacatacataaattgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaattgcactttgctctctccaaatcgtaacc 42369279  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  42369280 cttgttttcagaat 42369293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 435
Target Start/End: Original strand, 13972364 - 13972476
Alignment:
Q  323 gaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatcc 422  Q
    |||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| || | |||| |     
T  13972364 gaatcaaaacatacatgaactaatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacct 13972463  T
Q  423 ttgttttcagaat 435  Q
    |||||||||||||    
T  13972464 ttgttttcagaat 13972476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 426
Target Start/End: Complemental strand, 24234731 - 24234627
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    |||||||||||||| || ||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| |    
T  24234731 ggaattaaaacatacataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacc 24234632  T
Q  422 cttgt 426  Q
    |||||    
T  24234631 cttgt 24234627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 426
Target Start/End: Original strand, 25960158 - 25960262
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    |||||||||||||| || ||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| |    
T  25960158 ggaattaaaacatacataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacc 25960257  T
Q  422 cttgt 426  Q
    |||||    
T  25960258 cttgt 25960262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 3874926 - 3874812
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| |||||||||||||||  || | ||||| ||||  |||| ||||| | ||||||||| | |||||||||||||| ||||  |||     
T  3874926 aggaatcaatacatacatgaactcgtaaaagagtgaataaatcgcccttctagccgtcttgtagtctcaaaatcgcactttgctctctccaaatcataac 3874827  T
Q  421 ccttgttttcagaat 435  Q
    |||||||||||||||    
T  3874826 ccttgttttcagaat 3874812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 321 - 435
Target Start/End: Original strand, 17876479 - 17876593
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  |||| ||||| | ||||||||| | ||| |||||||||| |||| ||||     
T  17876479 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcccttctagccgtcttgtagtctcaaaatcgcaccttgctctctccaaatcgtaac 17876578  T
Q  421 ccttgttttcagaat 435  Q
    |||||||||||||||    
T  17876579 ccttgttttcagaat 17876593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 426
Target Start/End: Original strand, 31586381 - 31586479
Alignment:
Q  328 aaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatccttgt 426  Q
    |||||||| |||||||  || ||||||| ||||||| ||||| |||| |||||| ||||||||||   |||||||||||||| |||| |||| ||||||    
T  31586381 aaaacatacatgaactgatagaaggatgaagaaatcgccctcctagccgtctttaggtctcaaaattgcactttgctctctccaaatcgtaacccttgt 31586479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 406
Target Start/End: Complemental strand, 16178764 - 16178679
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctct 406  Q
    |||||| || ||||| ||||||| ||||||||||| ||||||||||||  |||| ||||| | ||||||||| | |||||||||||    
T  16178764 aggaatcaatacatacatgaactggtaaaaggatgaagaaatcacccttctagccgtcttgtagtctcaaaatcgcactttgctct 16178679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 43723337 - 43723224
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| ||| |||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||  ||||||| || |||||| |    
T  43723337 ggaatcaaaacatacatgtactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcccacttgactctctccaatttgtaacc 43723238  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  43723237 cttgttttcagaat 43723224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 426
Target Start/End: Complemental strand, 24238003 - 24237899
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    |||||||||||||| || ||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | || ||||||||||| |||| |||| |    
T  24238003 ggaattaaaacatacataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcattttgctctctccaaatcgtaacc 24237904  T
Q  422 cttgt 426  Q
    |||||    
T  24237903 cttgt 24237899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 426
Target Start/End: Original strand, 37280146 - 37280250
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| | |||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| |    
T  37280146 ggaatcaaaacatacacgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacc 37280245  T
Q  422 cttgt 426  Q
    |||||    
T  37280246 cttgt 37280250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 409
Target Start/End: Original strand, 43208359 - 43208446
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctc 409  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | ||||||||||||||    
T  43208359 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctc 43208446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 435
Target Start/End: Original strand, 9185893 - 9186006
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| ||||  ||||| ||||||||||   |||||||||||||| |||| |||| |    
T  9185893 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccatctttaggtctcaaaattgcactttgctctctccaaatcgtaacc 9185992  T
Q  422 cttgttttcagaat 435  Q
    ||||| || |||||    
T  9185993 cttgtctttagaat 9186006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 406
Target Start/End: Complemental strand, 12219432 - 12219347
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctct 406  Q
    |||||| || ||||| ||||||  ||||||||||| ||||||| ||||| |||| ||||| | ||||||||| | |||||||||||    
T  12219432 aggaatcaacacatacatgaacaggtaaaaggatgaagaaatcgccctcctagccgtcttatagtctcaaaatcgcactttgctct 12219347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 426
Target Start/End: Complemental strand, 8888271 - 8888167
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    |||||||||||||| || ||||  || |||  || ||||||| ||||| |||| |||||| |||||||||| |  ||||||||||||| |||| |||| |    
T  8888271 ggaattaaaacatacataaactgatagaagattgaagaaatcgccctcctagccgtctttaggtctcaaaatcgtactttgctctctccaaatcgtaacc 8888172  T
Q  422 cttgt 426  Q
    |||||    
T  8888171 cttgt 8888167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 409
Target Start/End: Complemental strand, 22020704 - 22020617
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctc 409  Q
    |||||||||||||| |||||||  || |||| || ||||||| ||||  ||||||||||| |||||||||| |  |||||| ||||||    
T  22020704 ggaattaaaacatacatgaactgatagaaggttgaagaaatcgcccttctagcagtctttaggtctcaaaatcatactttggtctctc 22020617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 11348400 - 11348462
Alignment:
Q  357 agaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaa 419  Q
    ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| ||||    
T  11348400 agaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaa 11348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 435
Target Start/End: Original strand, 16791227 - 16791341
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  | || ||||| | ||||||||| | |||||||||||||| |||| | ||     
T  16791227 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgcaac 16791326  T
Q  421 ccttgttttcagaat 435  Q
    | |||||||||||||    
T  16791327 ctttgttttcagaat 16791341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 426
Target Start/End: Original strand, 1386890 - 1386995
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  | || ||||| | ||||||||| | |||||||||||||| |||| ||||     
T  1386890 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaac 1386989  T
Q  421 ccttgt 426  Q
    ||||||    
T  1386990 ccttgt 1386995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 322 - 435
Target Start/End: Original strand, 41058770 - 41058883
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| || | |||| |    
T  41058770 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacc 41058869  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  41058870 cttgttttcagaat 41058883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 435
Target Start/End: Original strand, 49853545 - 49853659
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||  ||||||||||| ||||||| ||||| |||| |||||| |||||||||| |  | ||||||||||| || | ||||     
T  49853545 aggaatcaatacatacatgaacaggtaaaaggatgaagaaatcgccctcctagccgtctttaggtctcaaaatcgtattttgctctctccaattcgtaac 49853644  T
Q  421 ccttgttttcagaat 435  Q
    |||||||||||||||    
T  49853645 ccttgttttcagaat 49853659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 426
Target Start/End: Original strand, 23022397 - 23022496
Alignment:
Q  327 taaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatccttgt 426  Q
    ||||||||| || ||||  || |||| || ||||||| |||||||||| |||||| |||||||||| | |||||||||||||| |||| |||| ||||||    
T  23022397 taaaacatacattaactgatagaaggttgaagaaatcgccctcatagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgt 23022496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 322 - 424
Target Start/End: Complemental strand, 45941071 - 45940969
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| |    
T  45941071 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaaac 45940972  T
Q  422 ctt 424  Q
    |||    
T  45940971 ctt 45940969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 20398508 - 20398395
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    |||||||||||||| |  ||||  || |||| || ||||||| ||||| |||| |||||  |||||||||| | ||||| |||||||| |||| |||| |    
T  20398508 ggaattaaaacatacacaaactgatagaaggttgaagaaatcgccctcctagccgtcttgaggtctcaaaatcgcacttggctctctccaaatcgtaacc 20398409  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  20398408 cttgttttcagaat 20398395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 2405166 - 2405052
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||| || ||||||| ||||  |||| || || | || | |||| | || ||||||||||| |||||||||     
T  2405166 aggaatcaatacatacatgaactggtaaaaggttgaagaaatcgcccttctagccgttttgtagtgttaaaatcgcattttgctctctccaaattgtaac 2405067  T
Q  421 ccttgttttcagaat 435  Q
    |||||||||||||||    
T  2405066 ccttgttttcagaat 2405052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 440
Target Start/End: Original strand, 21018934 - 21019052
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || |||| || ||||| |||| ||||||  || |||||| | |||||||||||||| || | |||| |    
T  21018934 ggaatcaaaacatacatgaactgatagaaggttgaagaattctccctcctagccgtctttatgtttcaaaatcgcactttgctctctccaattcgtaacc 21019033  T
Q  422 cttgttttcagaattatct 440  Q
    |||||||||||||| ||||    
T  21019034 cttgttttcagaataatct 21019052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 426
Target Start/End: Complemental strand, 28110677 - 28110608
Alignment:
Q  357 agaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatccttgt 426  Q
    ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| ||||||    
T  28110677 agaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgt 28110608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 435
Target Start/End: Original strand, 3797293 - 3797407
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||| | |||||||  || ||||||| ||||  | || ||||| | ||||||||| | |||||||||||||| |||| ||||     
T  3797293 aggaatcaatacatacatgaaatggtaaaagattgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaac 3797392  T
Q  421 ccttgttttcagaat 435  Q
    || ||||||||||||    
T  3797393 ccctgttttcagaat 3797407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 409
Target Start/End: Original strand, 34732824 - 34732914
Alignment:
Q  319 ataggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctc 409  Q
    ||||||||||||||||| |||||||  || |||| || ||||||| ||||  || | |||||| ||||||||||   ||||||||||||||    
T  34732824 ataggaattaaaacatacatgaactgatagaaggttgaagaaatcgccctactatccgtctttaggtctcaaaattgcactttgctctctc 34732914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 435
Target Start/End: Original strand, 13809987 - 13810099
Alignment:
Q  323 gaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatcc 422  Q
    ||||||||||||| ||||||| |||||||| || ||||||| |||||  ||||||||| |||||||||||    ||||||||||||| |||| |||| |     
T  13809987 gaattaaaacatacatgaactggtaaaaggttgaagaaatctccctcccagcagtcttctggtctcaaaattgaactttgctctctccaaatcgtaaccg 13810086  T
Q  423 ttgttttcagaat 435  Q
    ||||||| |||||    
T  13810087 ttgtttttagaat 13810099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 435
Target Start/End: Complemental strand, 4861419 - 4861341
Alignment:
Q  357 agaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatccttgttttcagaat 435  Q
    ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| |||||||||||||||    
T  4861419 agaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgttttcagaat 4861341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 429
Target Start/End: Original strand, 18563003 - 18563113
Alignment:
Q  319 ataggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgta 418  Q
    |||||||| |||||||| |||||||  ||||||| || |||||||  |||| || ||||||| ||||||||||| | |||||||||||||| |||| |||    
T  18563003 ataggaatcaaaacatacatgaactgataaaaggttgaagaaatcgtcctcctaacagtcttctggtctcaaaatcgcactttgctctctccaaatcgta 18563102  T
Q  419 atccttgtttt 429  Q
    | |||| ||||    
T  18563103 acccttatttt 18563113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 435
Target Start/End: Original strand, 9865200 - 9865313
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| || ||||| |||||||  || |||| || ||||||| ||||| |||| || ||| |||||||||| | |||||||||||||| |||| |||| |    
T  9865200 ggaatcaagacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtgtttaggtctcaaaatcacactttgctctctccaaatcgtaacc 9865299  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  9865300 cttgttttcagaat 9865313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 409
Target Start/End: Original strand, 4596482 - 4596569
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctc 409  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| ||||||||||||||||    
T  4596482 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatctcactttgctctctc 4596569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 4695165 - 4695052
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || |||| || ||||| |||| |||||| |||||||||| | || ||||||||||| || | |||| |    
T  4695165 ggaatcaaaacatacatgaactgatagaaggttgaagaattcgccctcctagccgtctttaggtctcaaaatcgcaatttgctctctccaattcgtaacc 4695066  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  4695065 cttgttttcagaat 4695052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 17730456 - 17730343
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| ||||||||||   ||||| |||||||| || | ||||||    
T  17730456 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttcggtctcaaaattgcacttggctctctccaattcgtaatc 17730357  T
Q  422 cttgttttcagaat 435  Q
     |||||||||||||    
T  17730356 gttgttttcagaat 17730343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 426
Target Start/End: Original strand, 23225379 - 23225483
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| ||||||||||   |||||||||||||| |||| |||| |    
T  23225379 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaattgcactttgctctctccaaatcgtaacc 23225478  T
Q  422 cttgt 426  Q
    |||||    
T  23225479 cttgt 23225483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 426
Target Start/End: Original strand, 23234532 - 23234636
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| ||||||||||   |||||||||||||| |||| |||| |    
T  23234532 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaattgcactttgctctctccaaatcgtaacc 23234631  T
Q  422 cttgt 426  Q
    |||||    
T  23234632 cttgt 23234636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 409
Target Start/End: Complemental strand, 20593919 - 20593832
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctc 409  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | ||||||||||||||    
T  20593919 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctc 20593832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 9080819 - 9080705
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||| | |||||||  || ||||||| ||||  |||| ||||| | ||||||||| | |||||||||||||| |||| ||||     
T  9080819 aggaatcaatacatacatgaattggtaaaagagtgaagaaatcgcccttctagccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaac 9080720  T
Q  421 ccttgttttcagaat 435  Q
    |||||| ||||||||    
T  9080719 ccttgtgttcagaat 9080705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 409
Target Start/End: Complemental strand, 9405898 - 9405811
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctc 409  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||  |||| |||||| |||||||||| | ||||||||||||||    
T  9405898 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgcccttctagccgtctttaggtctcaaaatcgcactttgctctctc 9405811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 435
Target Start/End: Original strand, 20081190 - 20081304
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  |||| ||||| | || |||||| | || ||| ||||||| |||| ||||     
T  20081190 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcccttctagccgtcttgtagtttcaaaatcgcaatttcctctctccaaatcgtaac 20081289  T
Q  421 ccttgttttcagaat 435  Q
    |||||||||||||||    
T  20081290 ccttgttttcagaat 20081304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 11950930 - 11950991
Alignment:
Q  365 ccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatccttgt 426  Q
    ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| ||||||    
T  11950930 ccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacccttgt 11950991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 436
Target Start/End: Complemental strand, 30065996 - 30065882
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| ||||| || |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| || | |||| |    
T  30065996 ggaatcaaaacttacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaattcgtaacc 30065897  T
Q  422 cttgttttcagaatt 436  Q
    |||||||||||||||    
T  30065896 cttgttttcagaatt 30065882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 426
Target Start/End: Complemental strand, 34831417 - 34831313
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| ||||| |  || |||| || ||||||| ||||| |||| |||||| |||||||||| |||||||||||||||| |||| |||| |    
T  34831417 ggaatcaaaacatacatgaattgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatctcactttgctctctccaaatcgtaacc 34831318  T
Q  422 cttgt 426  Q
    |||||    
T  34831317 cttgt 34831313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 319 - 433
Target Start/End: Original strand, 18239961 - 18240075
Alignment:
Q  319 ataggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgta 418  Q
    |||||||| |||||||| | |||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| ||     
T  18239961 ataggaatcaaaacatacaggaactgatagaaggttgaagaaatcgccctcctagctgtctttaggtctcaaaatcgcactttgctctctccaaatcgtc 18240060  T
Q  419 atccttgttttcaga 433  Q
    | |||||| ||||||    
T  18240061 acccttgtgttcaga 18240075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 7270670 - 7270557
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| ||| || |||||||||| | ||||| |||||||| || | |||| |    
T  7270670 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagctgtcgttaggtctcaaaatcgcacttagctctctccaattcgtaacc 7270571  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  7270570 cttgttttcagaat 7270557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 426
Target Start/End: Complemental strand, 40582904 - 40582799
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||| |||| ||||| | ||||||||| | |||||||||||||| |||| ||||     
T  40582904 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgccctcctagccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaac 40582805  T
Q  421 ccttgt 426  Q
    ||||||    
T  40582804 ccttgt 40582799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 435
Target Start/End: Original strand, 41877233 - 41877346
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    |||||||||||||| || ||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | ||||||||| |||| |||| || | |    
T  41877233 ggaattaaaacatacataaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctatctccaaatcgtcacc 41877332  T
Q  422 cttgttttcagaat 435  Q
    ||| ||||||||||    
T  41877333 ctttttttcagaat 41877346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 426
Target Start/End: Original strand, 26753170 - 26753274
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| ||||  ||||| |||||||||| | |||||||||||||| |||| |||| |    
T  26753170 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccatctttaggtctcaaaatcgcactttgctctctccaaatcgtaacc 26753269  T
Q  422 cttgt 426  Q
    |||||    
T  26753270 cttgt 26753274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 429
Target Start/End: Original strand, 26907922 - 26908030
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||||||||  |||| ||||| | ||||||||| | |||||| ||||||| |||||||||     
T  26907922 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcacccttctagccgtcttgtagtctcaaaatcacacttttctctctccaaattgtaac 26908021  T
Q  421 ccttgtttt 429  Q
    |||| ||||    
T  26908022 ccttatttt 26908030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 435
Target Start/End: Original strand, 4099996 - 4100103
Alignment:
Q  328 aaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatccttgtt 427  Q
    |||||||| |||||||  || |||| || |||| || ||||| |||| |||||| |||||||||| | || ||||||||||| || | ||||||||| ||    
T  4099996 aaaacatacatgaactgatagaaggttgaagaattcgccctcctagccgtctttaggtctcaaaatcgcattttgctctctccaattcgtaatccttatt 4100095  T
Q  428 ttcagaat 435  Q
    ||||||||    
T  4100096 ttcagaat 4100103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 12087613 - 12087499
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  | || ||||| | ||||||||| | |||||||||||||| |||| || |     
T  12087613 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtcac 12087514  T
Q  421 ccttgttttcagaat 435  Q
    |||||||||||||||    
T  12087513 ccttgttttcagaat 12087499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 17748095 - 17747981
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  | || ||||| | ||||||||| | ||||||||| |||| |||| ||||     
T  17748095 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctatctcaaaatcgtaac 17747996  T
Q  421 ccttgttttcagaat 435  Q
    |||||||||||||||    
T  17747995 ccttgttttcagaat 17747981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 33551775 - 33551662
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaatt-gtaat 420  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| ||||| | ||||||||| | ||||||||||| ||| |||| ||||     
T  33551775 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtcttgtagtctcaaaatcacactttgctct-tctcaattcgtaac 33551677  T
Q  421 ccttgttttcagaat 435  Q
    |||||||||||||||    
T  33551676 ccttgttttcagaat 33551662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 2837028 - 2836915
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || |||| || ||||| |||| |||||| |||||||||| |  ||||| ||||||| || | |||| |    
T  2837028 ggaatcaaaacatacatgaactgatagaaggttgaagaattcgccctcctagccgtctttaggtctcaaaatcgtacttttctctctccaattcgtaacc 2836929  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  2836928 cttgttttcagaat 2836915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 435
Target Start/End: Complemental strand, 18952350 - 18952234
Alignment:
Q  319 ataggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaatt-gt 417  Q
    |||||||| |||||||  |||||||  ||||||| || ||||||||||||| ||||  |||| | ||||||||| | ||||||| |||  ||||||| ||    
T  18952350 ataggaatcaaaacatgcatgaactgataaaaggttgaagaaatcaccctcctagccatcttgtagtctcaaaatcgcactttgttct-gctaaattcgt 18952252  T
Q  418 aatccttgttttcagaat 435  Q
    ||||||||| ||||||||    
T  18952251 aatccttgtcttcagaat 18952234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 426
Target Start/End: Complemental strand, 26292446 - 26292341
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||  ||||||||||| ||||||  ||||| |||| ||||| | ||||||||| | |||||||||||||  |||| ||||     
T  26292446 aggaatcaatacatacatgaacaagtaaaaggatgaagaaattgccctcctagccgtcttgtagtctcaaaatcgcactttgctctcttcaaatcgtaac 26292347  T
Q  421 ccttgt 426  Q
    ||||||    
T  26292346 ccttgt 26292341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 426
Target Start/End: Original strand, 41306995 - 41307099
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||   ||||| |||||||||| | |||||||||||||| |||| |||| |    
T  41306995 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagtcatctttaggtctcaaaatcgcactttgctctctccaaatcgtaacc 41307094  T
Q  422 cttgt 426  Q
    |||||    
T  41307095 cttgt 41307099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 435
Target Start/End: Original strand, 34143681 - 34143795
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  | || ||||| | ||||||||| | |||||||||||||| |||| ||||     
T  34143681 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaac 34143780  T
Q  421 ccttgttttcagaat 435  Q
    || | ||||||||||    
T  34143781 ccctcttttcagaat 34143795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 426
Target Start/End: Original strand, 12058959 - 12059064
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  | || ||||| | ||||||||| | |||||||||||||| |||| ||||     
T  12058959 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcccttctcgccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaac 12059058  T
Q  421 ccttgt 426  Q
    ||||||    
T  12059059 ccttgt 12059064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 426
Target Start/End: Original strand, 4257 - 4361
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||||| |||| |||| |    
T  4257 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacc 4356  T
Q  422 cttgt 426  Q
    |||||    
T  4357 cttgt 4361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 5006 - 4893
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||| || |||| || |||| || ||||| ||||  ||||| |||||||||| | |||||||||||||| || |  ||| |    
T  5006 ggaatcaaaacatacatgaactcatagaaggttgaagaattctccctcctagccatctttaggtctcaaaatcgcactttgctctctccaattcataacc 4907  T
Q  422 cttgttttcagaat 435  Q
    ||||||||||||||    
T  4906 cttgttttcagaat 4893  T

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Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 431
Target Start/End: Original strand, 38248868 - 38248977
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    |||||||||||||| ||||||| ||| |||| || ||||||| ||||  |||| |||||| |||||||||| | |||||| ||||||| || | |||| |    
T  38248868 ggaattaaaacatacatgaactagtacaaggttgaagaaatcgcccttctagccgtctttaggtctcaaaatcgcacttttctctctccaattcgtaacc 38248967  T
Q  422 cttgttttca 431  Q
    ||||| ||||    
T  38248968 cttgtcttca 38248977  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 404
Target Start/End: Original strand, 21280233 - 21280318
Alignment:
Q  319 ataggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgct 404  Q
    |||||||| || ||||| |||||   ||||||||||| ||||||||||||| |||| ||||| | ||||||||  |||||||||||    
T  21280233 ataggaatcaatacatacatgaaaaggtaaaaggatgaagaaatcaccctcctagccgtcttgtagtctcaaagtctcactttgct 21280318  T

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Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 426
Target Start/End: Complemental strand, 16953427 - 16953323
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| ||||||||  ||||||  || |||| || ||||||| ||||| |||| |||||| |||||||||| | |||||||||||| | |||| |||| |    
T  16953427 ggaatcaaaacatacgtgaactgatagaaggttgaagaaatcgccctcctagccgtctttaggtctcaaaatcgcactttgctctccccaaatcgtaacc 16953328  T
Q  422 cttgt 426  Q
    |||||    
T  16953327 cttgt 16953323  T

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Target: scaffold0250 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 426
Target Start/End: Complemental strand, 19049 - 18945
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    |||||||||||||| || ||||  || |||| || ||||||| ||||  |||| |||||| |||||||||| | |||||||||||||| |||| |||| |    
T  19049 ggaattaaaacatacataaactgatagaaggttgaagaaatcgccctgctagccgtctttaggtctcaaaatcgcactttgctctctccaaatcgtaacc 18950  T
Q  422 cttgt 426  Q
    |||||    
T  18949 cttgt 18945  T

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Target: scaffold0520 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 428
Target Start/End: Original strand, 4448 - 4554
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||  ||||| |||| |||||| |||||||||| | |||||||||||||| || |||||| |    
T  4448 ggaatcaaaacatacatgaactgatagaaggttgaagaaattgccctcctagccgtctttaggtctcaaaatcgcactttgctctctccaatttgtaacc 4547  T
Q  422 cttgttt 428  Q
     ||||||    
T  4548 gttgttt 4554  T

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Target: scaffold0056 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 419
Target Start/End: Original strand, 67992 - 68090
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaa 419  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||| |||| ||||| | ||||||||| | |||||||||||||| |||| ||||    
T  67992 aggaatcaatacatacatgaactggtaaaagagtgaagaaatcgccctcttagccgtcttgtagtctcaaaatcgcactttgctctctccaaatcgtaa 68090  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 428
Target Start/End: Complemental strand, 84894 - 84788
Alignment:
Q  322 ggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaatc 421  Q
    ||||| |||||||| |||||||  || |||| || ||||||| ||||  |||| |||||| | |||||||| | |||||||||||||| |||| || | |    
T  84894 ggaatcaaaacatacatgaactgatagaaggttgaagaaatcgcccttctagccgtctttagatctcaaaatcgcactttgctctctccaaatcgtcacc 84795  T
Q  422 cttgttt 428  Q
    |||||||    
T  84794 cttgttt 84788  T

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Target: scaffold1785 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 406
Target Start/End: Complemental strand, 950 - 865
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctct 406  Q
    |||||| || ||||| ||||||  ||||||||||| ||||||| || |  |||||||||| | ||||||||| | |||||||||||    
T  950 aggaatcaatacatacatgaacaggtaaaaggatgaagaaatcgcctttctagcagtcttgtagtctcaaaatcgcactttgctct 865  T

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Target: scaffold0807 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 2564 - 2625
Alignment:
Q  345 gtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctct 406  Q
    ||||||||||| ||||||| ||||| |||| ||||| | ||||||||| | |||||||||||    
T  2564 gtaaaaggatgaagaaatctccctcctagccgtcttgtagtctcaaaatcgcactttgctct 2625  T

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Target: scaffold0084 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 426
Target Start/End: Complemental strand, 18950 - 18845
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctctctctaaattgtaat 420  Q
    |||||| || ||||| ||||||| |||||||  || ||||||| ||||  | || ||||| | ||||||||| | |||||||||||||| |||| ||||     
T  18950 aggaatcaatacatacatgaactggtaaaagagtgaagaaatctcccttcttgccgtcttgtagtctcaaaatcgcactttgctctctcaaaatcgtaac 18851  T
Q  421 ccttgt 426  Q
    ||||||    
T  18850 ccttgt 18845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 406
Target Start/End: Complemental strand, 63560 - 63475
Alignment:
Q  321 aggaattaaaacatatatgaactcgtaaaaggatggagaaatcaccctcatagcagtcttttggtctcaaaaactcactttgctct 406  Q
    |||||| || ||||| ||||||  ||||||||||| ||||||| || |  |||||||||| | ||||||||| | |||||||||||    
T  63560 aggaatcaatacatacatgaacaggtaaaaggatgaagaaatcgcctttctagcagtcttgtagtctcaaaatcgcactttgctct 63475  T

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