View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13763_low_105 (Length: 367)
Name: NF13763_low_105
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13763_low_105 |
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Alignment Details
Target: chr8 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 8 - 348
Target Start/End: Complemental strand, 34476930 - 34476590
Alignment:
| Q |
8 |
tgagatgaaatcctgcccaatttgcttgggtcgtgccatgatttgaagctttgcgcatagtacaatactaaacctaatctaaaactgtgtcatgattttc |
107 |
Q |
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| T |
34476930 |
tgagctgaaatcctgcccaatttgcttgggtcgtgccatgatttgaagctttgcgcatagtacaatactaaacctaatctaaaactgtgtcatgattttc |
34476831 |
T |
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| Q |
108 |
agaatcgtgccatgaaatttctagcgccacgtttctcaaaccgtgcctcgattttgcataaacttcaacataaatttgagccaattttcaacacttatgt |
207 |
Q |
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| T |
34476830 |
aaaatcgtgccatgatatttctagcgccacgtttctcaaaccgtgcctcgattttgcataaacttcaacataaatttgagccaattttcaacacttatgt |
34476731 |
T |
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| Q |
208 |
tcgttatattagtcttaaactcttaatgtataatttgcaagtaaatataaaatataatacttttagcatgacacatattccattgtattttgatttttta |
307 |
Q |
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| T |
34476730 |
tcgttatattagtcttaaactcttaatgtataatttgtaagtaaatataaaatataatacttttagcatgacacatattccattgtattttgatttttta |
34476631 |
T |
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| Q |
308 |
tcggaggaaaagcaaagacataaaagaggaaaactaagcaa |
348 |
Q |
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| T |
34476630 |
tcgaaggaaaagcaaagacataaaagaggaaaactaagcaa |
34476590 |
T |
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