View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13763_low_130 (Length: 309)
Name: NF13763_low_130
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13763_low_130 |
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Alignment Details
Target: chr3 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 12 - 292
Target Start/End: Original strand, 46614136 - 46614416
Alignment:
| Q |
12 |
acagatggcattatggaatatgataatgaatattaatcgttatgaaattgtgctaagttaaggtaacacgattctaggaagacagagtggtgggtatgtt |
111 |
Q |
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| T |
46614136 |
acagatggcattatggaatatgataatgaatattaatcgttatgaaattgtgctaagttaaggtaacacgattctaggaagacagagtggtgggtatgtt |
46614235 |
T |
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| Q |
112 |
tggagatggatatatggattatggagtttacagctcataagatggagcaatacatatagagaatggaaggtgtggttaactatagctagggtctaccatg |
211 |
Q |
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| T |
46614236 |
tggagatggatatatggattatggagtttacagctcataagatggagcaatacatatagagaatggaaggtgtggttaactatagctagggtctaccaag |
46614335 |
T |
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| Q |
212 |
ctaattagatgtaagttgggactggaaagttagttggtcttggtcacatagatagggccatgtacttatggaatcttttta |
292 |
Q |
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| T |
46614336 |
ctaattagatgtaagttgggactggaaagttagttggtcttggtcacatagatagggccatgtacttatggaatcttttta |
46614416 |
T |
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