View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13763_low_134 (Length: 300)
Name: NF13763_low_134
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13763_low_134 |
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Alignment Details
Target: chr6 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 10663615 - 10663896
Alignment:
| Q |
1 |
gtaaatttgtaggattgagttagacacaacttaattttttaggatagtatcaaataccagcccattcaaatcatgctctagatgtttgattctggccctc |
100 |
Q |
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| T |
10663615 |
gtaaatttgtagggttgagttaggcacagcttaattttttaggatagtatcaaataccggtccattcaagtcatgctctagatgttcgattctggccctc |
10663714 |
T |
|
| Q |
101 |
aacaattgttattagtcccacatgatgaaacaatgcttagaagggcatttctcatattaaaaactagttttgtataagggttgagttaagtctaacctaa |
200 |
Q |
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| T |
10663715 |
agcaattgttattagtcccacgtgatgaaacaatgctt-gaagggcatttctcatattaaaaactagttttgtataagggttgggttaactctaacctaa |
10663813 |
T |
|
| Q |
201 |
ttctaagaaaaacatgtcaacatttattgaattgaataaactaaaagtacaatggtggtaggttgacggttaaaaacaactata |
284 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
10663814 |
ttctaagaaaaacatgt-gacatttattgaattgaataaactaaaagtacaatggtggtaggttgacagttaaaaacaactata |
10663896 |
T |
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