View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13763_low_152 (Length: 272)
Name: NF13763_low_152
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13763_low_152 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 262
Target Start/End: Original strand, 11068993 - 11069246
Alignment:
| Q |
8 |
taaaatgaatcaatatgttgaatgaagctaacctaaacacacaacaataccaaacctaaaataataaagaataaatatttctgcaagcacgaattactaa |
107 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
11068993 |
taaaatgaatcaatatgttgaatgaagctaacttaaacacacaacaatatcaaacctagaataataaagaataaatatttctgcaagcacgaattactaa |
11069092 |
T |
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| Q |
108 |
cttcaatcttattgaatacgatcaattacagagctgtcattattataaattacataataaccacatatattacaccacattttgtcattgcacaaagatc |
207 |
Q |
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||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
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| T |
11069093 |
cttcaatcttattgaatacgatcaattacagaggtgtcatta-tataaattacataataaccacatatattacaccgcattttgtcattgcacaaaaatc |
11069191 |
T |
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| Q |
208 |
aaactaagatatataaagtctaagactttatataataatttatgatataatatta |
262 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
11069192 |
aaactaagatatataaagtctaagacttaatataataatttatgatataatatta |
11069246 |
T |
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