View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13763_low_168 (Length: 241)
Name: NF13763_low_168
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13763_low_168 |
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Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 24 - 224
Target Start/End: Complemental strand, 10931052 - 10930852
Alignment:
| Q |
24 |
acatgatcttctcataccaggtcttcctgatcacatagctcaactttgtctatcttcaatcaacccttctcttctcttcaaagtatgtcactcatggcgt |
123 |
Q |
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| T |
10931052 |
acatgatcttctcataccaggtcttcctgatcacatagctcaactttgtctatcttcaatcaacccttctcttctcttcaaagtatgtcactcatggcgt |
10930953 |
T |
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| Q |
124 |
agacttatctactcaccttcttttccacctttcttttctctctatgcaattctctcaccacccaaatcacatcattcacactcaattcaattccacaact |
223 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
10930952 |
agacttatctactcaccttcttttccacctttcttttctctctatgcaattctctcaccccccaaatcacatcattcacactcaattcaattccacaact |
10930853 |
T |
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| Q |
224 |
t |
224 |
Q |
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| T |
10930852 |
t |
10930852 |
T |
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