View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13763_low_174 (Length: 238)
Name: NF13763_low_174
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13763_low_174 |
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Alignment Details
Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 34184865 - 34184640
Alignment:
| Q |
12 |
caaaacacactacacatgtcatttatagatgcaaagtaatacttcatcatattcttttt-acaagagataacattttaaaagttgatgtatttgatatat |
110 |
Q |
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| T |
34184865 |
caaaacacactacacatgtcattcatagatgcaaagtaatacttcatcatattcttttttacaagagataacatttcaaaagttgatgtatttggtatat |
34184766 |
T |
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| Q |
111 |
ttttatgtttaatccttagaggcctaggttgtctgattttagactaatttctttactcgactgtatgtaaaaagtgttggctaagatattgactaaaatg |
210 |
Q |
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| T |
34184765 |
ttttatgtttaatccttagaggcctaggttgtctgattttagactaatttctttactcgactgtatgtaaaaagtgttggctaagatattgactaaaatg |
34184666 |
T |
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| Q |
211 |
tcaagataggttgttgatagtataat |
236 |
Q |
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| T |
34184665 |
ttaagataggttgttgatagtgtaat |
34184640 |
T |
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