View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13763_low_19 (Length: 636)

Name: NF13763_low_19
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13763_low_19
NF13763_low_19
[»] chr3 (86 HSPs)
chr3 (91-304)||(29822439-29822652)
chr3 (314-491)||(19622003-19622181)
chr3 (312-458)||(53808314-53808461)
chr3 (311-450)||(8371215-8371355)
chr3 (311-434)||(42633883-42634007)
chr3 (308-433)||(54653964-54654090)
chr3 (310-434)||(42632700-42632825)
chr3 (314-485)||(39133015-39133187)
chr3 (309-438)||(7820383-7820513)
chr3 (299-432)||(10987652-10987786)
chr3 (310-485)||(17350048-17350224)
chr3 (311-441)||(25583109-25583240)
chr3 (311-432)||(41386125-41386247)
chr3 (318-419)||(43101896-43101998)
chr3 (311-491)||(47765434-47765614)
chr3 (311-438)||(29536709-29536837)
chr3 (311-434)||(41387430-41387554)
chr3 (311-422)||(51825630-51825742)
chr3 (301-438)||(47855331-47855469)
chr3 (309-441)||(26798896-26799029)
chr3 (308-432)||(47808105-47808230)
chr3 (311-438)||(11220651-11220779)
chr3 (308-411)||(51401371-51401475)
chr3 (311-438)||(25585826-25585954)
chr3 (312-426)||(13077956-13078071)
chr3 (311-399)||(8372648-8372737)
chr3 (310-438)||(17345305-17345433)
chr3 (325-447)||(11219439-11219562)
chr3 (311-448)||(51400210-51400348)
chr3 (311-424)||(54752611-54752725)
chr3 (85-197)||(9777068-9777181)
chr3 (311-438)||(49334330-49334458)
chr3 (311-441)||(53047892-53048023)
chr3 (356-441)||(23559859-23559945)
chr3 (313-434)||(47806815-47806936)
chr3 (311-436)||(53049032-53049158)
chr3 (310-441)||(48035314-48035446)
chr3 (537-596)||(8371442-8371501)
chr3 (81-148)||(9769345-9769412)
chr3 (311-489)||(32979083-32979262)
chr3 (537-596)||(34902829-34902888)
chr3 (326-436)||(39287480-39287591)
chr3 (312-375)||(47854506-47854569)
chr3 (541-596)||(53808544-53808599)
chr3 (311-436)||(32973134-32973260)
chr3 (537-595)||(47765661-47765719)
chr3 (340-424)||(19253009-19253094)
chr3 (311-384)||(19622967-19623040)
chr3 (311-423)||(55443558-55443671)
chr3 (298-386)||(19579340-19579428)
chr3 (310-386)||(32974269-32974345)
chr3 (314-386)||(40502261-40502333)
chr3 (308-368)||(48336339-48336399)
chr3 (311-422)||(49122011-49122123)
chr3 (311-422)||(52292589-52292701)
chr3 (311-386)||(33563944-33564019)
chr3 (312-426)||(36626727-36626842)
chr3 (314-436)||(52293518-52293641)
chr3 (314-423)||(5416196-5416306)
chr3 (311-368)||(14206844-14206901)
chr3 (311-368)||(14214592-14214649)
chr3 (313-386)||(35633224-35633297)
chr3 (311-427)||(39288443-39288560)
chr3 (311-368)||(53809557-53809614)
chr3 (541-593)||(17349940-17349992)
chr3 (541-593)||(39133243-39133295)
chr3 (356-434)||(2124069-2124148)
chr3 (311-386)||(2225070-2225145)
chr3 (415-458)||(7483498-7483541)
chr3 (311-386)||(7583465-7583540)
chr3 (311-386)||(7822032-7822107)
chr3 (313-491)||(12062324-12062503)
chr3 (534-593)||(32979307-32979366)
chr3 (311-401)||(48252928-48253019)
chr3 (311-386)||(53342711-53342786)
chr3 (325-422)||(5417057-5417155)
chr3 (310-376)||(24753547-24753612)
chr3 (388-438)||(29537135-29537185)
chr3 (311-396)||(30431370-30431456)
chr3 (340-401)||(47766981-47767042)
chr3 (311-361)||(48338188-48338238)
chr3 (312-386)||(53347045-53347118)
chr3 (335-419)||(10986671-10986756)
chr3 (307-347)||(5810211-5810251)
chr3 (306-441)||(46446359-46446495)
chr3 (309-396)||(51214201-51214289)
[»] chr6 (33 HSPs)
chr6 (90-306)||(24546745-24546964)
chr6 (91-298)||(28930800-28931010)
chr6 (312-488)||(18139430-18139607)
chr6 (312-457)||(33801991-33802137)
chr6 (308-434)||(8412313-8412440)
chr6 (311-424)||(5311274-5311388)
chr6 (311-441)||(31738358-31738489)
chr6 (314-438)||(22299896-22300021)
chr6 (314-438)||(27438788-27438913)
chr6 (309-412)||(34084153-34084255)
chr6 (311-438)||(33807684-33807812)
chr6 (313-432)||(8411083-8411203)
chr6 (312-458)||(27440148-27440295)
chr6 (311-436)||(2138632-2138758)
chr6 (311-438)||(31740265-31740393)
chr6 (311-441)||(9927601-9927731)
chr6 (308-491)||(293580-293765)
chr6 (308-436)||(19368513-19368642)
chr6 (537-596)||(33801852-33801911)
chr6 (311-383)||(22298599-22298671)
chr6 (385-491)||(14328714-14328820)
chr6 (385-491)||(14421724-14421830)
chr6 (299-424)||(26581936-26582061)
chr6 (311-438)||(18773649-18773777)
chr6 (85-160)||(9754148-9754223)
chr6 (537-580)||(18139337-18139380)
chr6 (340-436)||(34083082-34083180)
chr6 (309-386)||(13173030-13173107)
chr6 (313-409)||(28225421-28225518)
chr6 (424-471)||(13507131-13507178)
chr6 (308-396)||(12203306-12203395)
chr6 (310-422)||(19367711-19367824)
chr6 (549-593)||(34084072-34084116)
[»] scaffold0025 (3 HSPs)
scaffold0025 (313-491)||(56640-56819)
scaffold0025 (319-401)||(54594-54677)
scaffold0025 (534-596)||(56533-56596)
[»] chr8 (79 HSPs)
chr8 (297-491)||(117029-117224)
chr8 (312-447)||(37276227-37276363)
chr8 (303-491)||(39546617-39546806)
chr8 (311-458)||(16363785-16363933)
chr8 (311-458)||(36756059-36756207)
chr8 (308-427)||(38591011-38591131)
chr8 (311-432)||(31625383-31625504)
chr8 (311-491)||(36070173-36070354)
chr8 (311-432)||(31623901-31624023)
chr8 (309-434)||(41867913-41868039)
chr8 (334-491)||(7486095-7486253)
chr8 (311-487)||(35943902-35944080)
chr8 (311-424)||(37472398-37472512)
chr8 (311-419)||(38589816-38589924)
chr8 (312-438)||(36940026-36940153)
chr8 (310-438)||(37274880-37275010)
chr8 (311-438)||(24068325-24068453)
chr8 (309-491)||(10052097-10052280)
chr8 (314-488)||(19913490-19913665)
chr8 (308-401)||(37323340-37323434)
chr8 (302-398)||(29739676-29739773)
chr8 (539-596)||(41522556-41522613)
chr8 (311-438)||(10053737-10053865)
chr8 (311-491)||(13366990-13367171)
chr8 (311-434)||(41866889-41867013)
chr8 (311-434)||(43275745-43275869)
chr8 (311-438)||(45385787-45385915)
chr8 (340-434)||(27750618-27750713)
chr8 (311-401)||(43386732-43386823)
chr8 (315-411)||(14820192-14820289)
chr8 (314-386)||(21267162-21267234)
chr8 (310-485)||(21961817-21961993)
chr8 (537-596)||(117269-117328)
chr8 (537-596)||(7486299-7486358)
chr8 (325-491)||(12281720-12281886)
chr8 (537-596)||(13363413-13363472)
chr8 (311-441)||(29738286-29738417)
chr8 (534-592)||(10052323-10052381)
chr8 (325-442)||(24069435-24069553)
chr8 (385-471)||(36938751-36938837)
chr8 (385-487)||(41522632-41522734)
chr8 (312-427)||(4810128-4810243)
chr8 (340-491)||(44606163-44606315)
chr8 (406-485)||(44103242-44103321)
chr8 (311-440)||(37980-38110)
chr8 (313-375)||(7487444-7487506)
chr8 (310-423)||(35945445-35945559)
chr8 (356-440)||(8095386-8095471)
chr8 (311-435)||(36071374-36071499)
chr8 (309-386)||(37474082-37474159)
chr8 (311-422)||(19914915-19915027)
chr8 (385-441)||(31871465-31871521)
chr8 (541-596)||(36756290-36756346)
chr8 (311-422)||(39515194-39515306)
chr8 (314-432)||(4807364-4807483)
chr8 (311-386)||(7815038-7815113)
chr8 (385-491)||(2421233-2421339)
chr8 (416-458)||(21267233-21267275)
chr8 (415-485)||(21670164-21670234)
chr8 (310-384)||(39544924-39544998)
chr8 (311-368)||(3237704-3237761)
chr8 (311-368)||(11081096-11081153)
chr8 (310-386)||(8502077-8502153)
chr8 (415-491)||(13513520-13513596)
chr8 (415-491)||(13603053-13603129)
chr8 (415-471)||(39325794-39325850)
chr8 (537-592)||(39546516-39546571)
chr8 (311-396)||(21551917-21552003)
chr8 (311-396)||(21552963-21553049)
chr8 (311-396)||(40102216-40102302)
chr8 (310-363)||(7561793-7561846)
chr8 (311-434)||(1570203-1570327)
chr8 (325-412)||(3237427-3237514)
chr8 (311-375)||(7795761-7795825)
chr8 (311-363)||(8395019-8395071)
chr8 (385-441)||(8395065-8395121)
chr8 (311-398)||(36734577-36734665)
chr8 (314-386)||(37324734-37324806)
chr8 (541-593)||(44103132-44103184)
[»] chr4 (90 HSPs)
chr4 (310-491)||(47668537-47668719)
chr4 (311-471)||(86798-86959)
chr4 (317-488)||(35787797-35787969)
chr4 (311-491)||(6616151-6616332)
chr4 (309-441)||(11114970-11115103)
chr4 (311-434)||(33377361-33377485)
chr4 (311-491)||(11094521-11094700)
chr4 (311-438)||(33376213-33376341)
chr4 (311-432)||(37560298-37560420)
chr4 (311-471)||(39592249-39592410)
chr4 (311-438)||(15446663-15446791)
chr4 (311-438)||(39590936-39591064)
chr4 (309-455)||(30683003-30683150)
chr4 (314-434)||(1273430-1273550)
chr4 (311-438)||(31711087-31711215)
chr4 (311-438)||(46796019-46796147)
chr4 (537-596)||(11094746-11094805)
chr4 (311-436)||(29833367-29833493)
chr4 (310-438)||(29686250-29686379)
chr4 (303-438)||(28103479-28103615)
chr4 (311-434)||(37558993-37559117)
chr4 (310-441)||(38370276-38370408)
chr4 (315-438)||(40146616-40146740)
chr4 (340-434)||(26788546-26788641)
chr4 (312-422)||(27408759-27408870)
chr4 (537-596)||(52980206-52980265)
chr4 (534-596)||(35788015-35788077)
chr4 (311-427)||(15787506-15787623)
chr4 (311-434)||(44128331-44128455)
chr4 (370-448)||(34438460-34438539)
chr4 (537-596)||(39592125-39592183)
chr4 (343-458)||(41401677-41401792)
chr4 (309-438)||(96674-96804)
chr4 (313-434)||(55953849-55953971)
chr4 (342-434)||(5688634-5688727)
chr4 (311-439)||(11113737-11113866)
chr4 (309-481)||(43894098-43894271)
chr4 (310-434)||(44126590-44126717)
chr4 (310-386)||(15445430-15445506)
chr4 (311-438)||(53400180-53400308)
chr4 (313-423)||(10403277-10403387)
chr4 (311-432)||(10403416-10403537)
chr4 (302-458)||(15786938-15787095)
chr4 (308-412)||(26393146-26393251)
chr4 (311-448)||(29687961-29688095)
chr4 (314-386)||(38553927-38553999)
chr4 (311-386)||(937144-937219)
chr4 (308-427)||(27410687-27410805)
chr4 (309-368)||(54372739-54372798)
chr4 (311-412)||(29663638-29663739)
chr4 (538-592)||(29687817-29687871)
chr4 (311-377)||(35789645-35789711)
chr4 (308-392)||(526758-526843)
chr4 (312-408)||(30682716-30682813)
chr4 (325-489)||(44302729-44302894)
chr4 (311-434)||(3217606-3217730)
chr4 (357-432)||(5687216-5687292)
chr4 (309-412)||(52658904-52659008)
chr4 (314-441)||(52660204-52660332)
chr4 (311-386)||(12396920-12396995)
chr4 (310-436)||(29834427-29834554)
chr4 (312-458)||(48207690-48207837)
chr4 (325-406)||(19049897-19049979)
chr4 (309-398)||(28370674-28370764)
chr4 (311-436)||(30672060-30672185)
chr4 (537-595)||(47668440-47668498)
chr4 (308-386)||(56001314-56001392)
chr4 (385-458)||(6140333-6140406)
chr4 (385-434)||(38417623-38417672)
chr4 (321-425)||(55952831-55952935)
chr4 (311-363)||(19048899-19048951)
chr4 (385-437)||(34439654-34439706)
chr4 (311-438)||(52981143-52981271)
chr4 (311-422)||(56000282-56000394)
chr4 (312-401)||(26376325-26376415)
chr4 (385-443)||(38419005-38419063)
chr4 (308-386)||(39135556-39135634)
chr4 (311-377)||(43895652-43895718)
chr4 (309-438)||(47667172-47667301)
chr4 (356-441)||(50530543-50530629)
chr4 (325-422)||(52881939-52882037)
chr4 (325-386)||(2309853-2309914)
chr4 (385-458)||(17319112-17319185)
chr4 (385-434)||(50531753-50531802)
chr4 (311-368)||(54374016-54374073)
chr4 (311-363)||(23202235-23202287)
chr4 (310-386)||(26428650-26428726)
chr4 (415-455)||(36604817-36604857)
chr4 (311-363)||(44664395-44664447)
chr4 (311-363)||(49923865-49923917)
[»] chr1 (81 HSPs)
chr1 (308-490)||(52742917-52743100)
chr1 (311-434)||(25785963-25786087)
chr1 (311-441)||(14071193-14071324)
chr1 (313-447)||(26056131-26056266)
chr1 (316-441)||(13930665-13930791)
chr1 (308-491)||(21276986-21277170)
chr1 (311-434)||(25787161-25787285)
chr1 (314-491)||(9633773-9633951)
chr1 (302-471)||(44977207-44977377)
chr1 (308-491)||(49141436-49141620)
chr1 (311-432)||(3978039-3978161)
chr1 (314-438)||(13641255-13641380)
chr1 (312-434)||(47410980-47411103)
chr1 (308-434)||(47411445-47411572)
chr1 (311-434)||(16218475-16218599)
chr1 (308-384)||(33793771-33793847)
chr1 (311-434)||(47136684-47136808)
chr1 (311-433)||(3979311-3979434)
chr1 (356-458)||(14169659-14169762)
chr1 (311-436)||(14390253-14390379)
chr1 (313-438)||(52741485-52741611)
chr1 (313-401)||(13929292-13929381)
chr1 (356-448)||(19466188-19466281)
chr1 (314-438)||(49139799-49139924)
chr1 (311-434)||(16217435-16217559)
chr1 (311-438)||(47560134-47560262)
chr1 (537-596)||(30551424-30551483)
chr1 (538-596)||(27689510-27689568)
chr1 (311-432)||(52181304-52181426)
chr1 (385-458)||(14764299-14764372)
chr1 (329-437)||(36511325-36511434)
chr1 (311-422)||(26054893-26055004)
chr1 (311-386)||(34653430-34653505)
chr1 (537-596)||(37624405-37624464)
chr1 (311-436)||(2237973-2238099)
chr1 (311-489)||(50678361-50678537)
chr1 (82-199)||(6709878-6709997)
chr1 (314-461)||(2972978-2973126)
chr1 (344-419)||(9592266-9592342)
chr1 (311-383)||(13642606-13642678)
chr1 (311-438)||(20953283-20953411)
chr1 (537-593)||(23081964-23082020)
chr1 (356-491)||(51726784-51726920)
chr1 (311-441)||(2236808-2236939)
chr1 (311-441)||(35683050-35683181)
chr1 (318-432)||(48467263-48467377)
chr1 (302-426)||(42248310-42248436)
chr1 (308-386)||(51424243-51424321)
chr1 (310-368)||(52439349-52439407)
chr1 (356-448)||(36509851-36509944)
chr1 (311-368)||(49619883-49619940)
chr1 (314-438)||(50679814-50679939)
chr1 (311-442)||(14312770-14312902)
chr1 (385-441)||(22167849-22167905)
chr1 (309-436)||(34531656-34531784)
chr1 (309-436)||(48973191-48973319)
chr1 (311-396)||(2971693-2971780)
chr1 (309-368)||(38451545-38451604)
chr1 (539-592)||(44977421-44977474)
chr1 (311-384)||(44979430-44979503)
chr1 (314-441)||(1872935-1873063)
chr1 (308-372)||(40779703-40779767)
chr1 (417-485)||(51218912-51218980)
chr1 (537-580)||(22766670-22766713)
chr1 (308-371)||(30548488-30548551)
chr1 (311-386)||(33941312-33941387)
chr1 (327-424)||(9119813-9119911)
chr1 (385-491)||(23082066-23082172)
chr1 (308-338)||(34654437-34654467)
chr1 (311-436)||(35684198-35684323)
chr1 (311-392)||(48974445-48974527)
chr1 (538-596)||(52742811-52742869)
chr1 (415-448)||(37624553-37624586)
chr1 (309-386)||(48934234-48934311)
chr1 (349-436)||(19464633-19464721)
chr1 (415-491)||(22766760-22766836)
chr1 (311-363)||(29001191-29001243)
chr1 (311-386)||(31860504-31860579)
chr1 (314-386)||(38458084-38458156)
chr1 (389-441)||(40811269-40811321)
chr1 (314-386)||(42244502-42244574)
[»] chr7 (87 HSPs)
chr7 (311-491)||(40930413-40930594)
chr7 (309-463)||(4857194-4857349)
chr7 (311-471)||(38406013-38406174)
chr7 (313-434)||(19279609-19279731)
chr7 (313-464)||(43930316-43930468)
chr7 (309-426)||(19278346-19278464)
chr7 (321-491)||(14109011-14109180)
chr7 (321-491)||(14418968-14419137)
chr7 (309-432)||(40926518-40926642)
chr7 (312-438)||(4858337-4858464)
chr7 (311-432)||(46674933-46675055)
chr7 (311-436)||(33458305-33458430)
chr7 (311-438)||(13446651-13446779)
chr7 (311-438)||(43936133-43936261)
chr7 (309-422)||(25153651-25153765)
chr7 (311-436)||(30222641-30222767)
chr7 (308-432)||(22744738-22744863)
chr7 (310-458)||(46458686-46458835)
chr7 (311-438)||(14107827-14107955)
chr7 (311-438)||(14417784-14417912)
chr7 (311-434)||(43006380-43006504)
chr7 (311-434)||(43007646-43007770)
chr7 (311-441)||(33459533-33459664)
chr7 (366-448)||(35315205-35315288)
chr7 (313-438)||(38408267-38408393)
chr7 (325-438)||(47163162-47163276)
chr7 (314-434)||(22746317-22746438)
chr7 (311-438)||(43931859-43931987)
chr7 (356-458)||(27899187-27899290)
chr7 (330-438)||(14206687-14206796)
chr7 (330-438)||(14215377-14215486)
chr7 (311-434)||(22061792-22061916)
chr7 (308-434)||(22060455-22060582)
chr7 (329-434)||(7148055-7148161)
chr7 (325-418)||(43935194-43935288)
chr7 (539-596)||(4167675-4167732)
chr7 (312-436)||(41618494-41618619)
chr7 (314-427)||(48671076-48671189)
chr7 (311-434)||(48672772-48672896)
chr7 (311-424)||(36702957-36703072)
chr7 (311-401)||(46457065-46457156)
chr7 (313-398)||(18802422-18802508)
chr7 (311-396)||(28325068-28325153)
chr7 (313-441)||(34558291-34558420)
chr7 (311-398)||(1970808-1970896)
chr7 (315-427)||(7146780-7146891)
chr7 (311-398)||(18801210-18801298)
chr7 (314-386)||(25154982-25155054)
chr7 (310-409)||(41616618-41616718)
chr7 (311-386)||(1885287-1885362)
chr7 (537-596)||(14108906-14108965)
chr7 (537-596)||(14418863-14418922)
chr7 (313-364)||(35128230-35128281)
chr7 (393-487)||(4167529-4167623)
chr7 (311-436)||(36673831-36673957)
chr7 (311-432)||(41126234-41126356)
chr7 (311-384)||(44114704-44114776)
chr7 (309-424)||(7345907-7346023)
chr7 (311-438)||(7347213-7347341)
chr7 (311-438)||(28326383-28326510)
chr7 (314-441)||(38001502-38001630)
chr7 (340-427)||(46673514-46673601)
chr7 (319-401)||(17288250-17288333)
chr7 (301-368)||(29658677-29658744)
chr7 (308-422)||(34557389-34557504)
chr7 (537-596)||(38406239-38406298)
chr7 (303-386)||(38778964-38779047)
chr7 (311-386)||(41127217-41127292)
chr7 (325-398)||(19848867-19848941)
chr7 (311-396)||(33228842-33228928)
chr7 (308-386)||(33229579-33229657)
chr7 (310-419)||(36702771-36702881)
chr7 (537-574)||(18801437-18801474)
chr7 (416-485)||(24494997-24495066)
chr7 (313-362)||(32141764-32141813)
chr7 (342-422)||(35127836-35127917)
chr7 (308-396)||(41516379-41516468)
chr7 (313-436)||(30223971-30224095)
chr7 (311-386)||(35480203-35480277)
chr7 (311-401)||(41514993-41515082)
chr7 (385-427)||(35128195-35128237)
chr7 (537-570)||(19848695-19848728)
chr7 (309-441)||(24871984-24872116)
chr7 (329-386)||(45089485-45089541)
chr7 (313-386)||(48755594-48755667)
chr7 (311-363)||(18670572-18670624)
chr7 (314-386)||(21171532-21171604)
[»] chr2 (57 HSPs)
chr2 (308-443)||(23177665-23177802)
chr2 (308-443)||(23588922-23589059)
chr2 (310-489)||(12852880-12853060)
chr2 (308-434)||(42028955-42029082)
chr2 (311-491)||(29424552-29424733)
chr2 (311-457)||(4829460-4829607)
chr2 (311-438)||(6706921-6707049)
chr2 (307-438)||(37867747-37867879)
chr2 (312-438)||(23178875-23179002)
chr2 (312-438)||(23590132-23590259)
chr2 (309-434)||(2581796-2581922)
chr2 (300-396)||(7038367-7038464)
chr2 (311-458)||(7036961-7037109)
chr2 (311-434)||(42027188-42027312)
chr2 (311-438)||(42246586-42246714)
chr2 (313-458)||(28109842-28109988)
chr2 (314-398)||(10368418-10368503)
chr2 (356-491)||(7490135-7490271)
chr2 (311-458)||(37869013-37869161)
chr2 (313-384)||(4701535-4701606)
chr2 (311-441)||(14509204-14509335)
chr2 (538-596)||(21010333-21010391)
chr2 (313-458)||(35799509-35799655)
chr2 (309-401)||(12854134-12854227)
chr2 (311-434)||(2583543-2583667)
chr2 (311-441)||(3254851-3254982)
chr2 (340-438)||(6209058-6209156)
chr2 (308-386)||(14573854-14573932)
chr2 (311-436)||(41312495-41312621)
chr2 (313-394)||(41795989-41796071)
chr2 (303-396)||(42368343-42368436)
chr2 (312-436)||(2305536-2305661)
chr2 (314-434)||(15650439-15650560)
chr2 (311-375)||(11575512-11575576)
chr2 (308-422)||(4628874-4628989)
chr2 (311-386)||(5564054-5564129)
chr2 (311-386)||(5565191-5565266)
chr2 (537-596)||(41296289-41296348)
chr2 (415-485)||(4512206-4512276)
chr2 (415-485)||(14714592-14714662)
chr2 (416-485)||(26205114-26205183)
chr2 (385-438)||(40174757-40174810)
chr2 (310-441)||(2306651-2306782)
chr2 (311-375)||(3665219-3665283)
chr2 (311-398)||(12958412-12958499)
chr2 (541-593)||(14714718-14714770)
chr2 (308-368)||(42596552-42596612)
chr2 (311-441)||(32614380-32614511)
chr2 (385-487)||(7983639-7983741)
chr2 (309-363)||(27657816-27657870)
chr2 (415-448)||(21010481-21010514)
chr2 (310-363)||(21545138-21545191)
chr2 (537-582)||(29424462-29424506)
chr2 (309-374)||(42249846-42249911)
chr2 (310-386)||(17179297-17179373)
chr2 (314-386)||(30202929-30203001)
chr2 (400-448)||(41296437-41296485)
[»] chr5 (65 HSPs)
chr5 (311-458)||(5382937-5383085)
chr5 (311-422)||(18677971-18678083)
chr5 (313-438)||(1273086-1273212)
chr5 (311-447)||(7345374-7345511)
chr5 (311-438)||(5384339-5384467)
chr5 (311-441)||(19525278-19525409)
chr5 (314-447)||(18693696-18693830)
chr5 (311-447)||(21387632-21387769)
chr5 (308-438)||(15613497-15613628)
chr5 (311-448)||(42510109-42510247)
chr5 (310-422)||(19827149-19827262)
chr5 (311-427)||(42979443-42979560)
chr5 (325-436)||(15614955-15615067)
chr5 (302-422)||(19523969-19524089)
chr5 (314-425)||(26404216-26404328)
chr5 (311-432)||(1663182-1663304)
chr5 (311-384)||(6629726-6629799)
chr5 (311-422)||(12936111-12936223)
chr5 (311-432)||(26403302-26403424)
chr5 (314-434)||(10085842-10085963)
chr5 (313-421)||(27894033-27894142)
chr5 (311-422)||(12950269-12950381)
chr5 (311-375)||(41905170-41905234)
chr5 (311-386)||(1273386-1273461)
chr5 (311-436)||(15510258-15510384)
chr5 (314-438)||(5975754-5975879)
chr5 (539-596)||(7426865-7426922)
chr5 (314-438)||(22812380-22812505)
chr5 (302-362)||(10084613-10084673)
chr5 (314-436)||(4566949-4567072)
chr5 (311-386)||(5061023-5061098)
chr5 (309-422)||(38473564-38473679)
chr5 (385-491)||(2167455-2167560)
chr5 (308-386)||(5062232-5062310)
chr5 (313-450)||(12933748-12933886)
chr5 (312-432)||(8762399-8762520)
chr5 (314-438)||(18695640-18695765)
chr5 (311-368)||(19825869-19825926)
chr5 (314-386)||(224636-224708)
chr5 (299-438)||(42980702-42980842)
chr5 (311-386)||(4568020-4568095)
chr5 (313-440)||(5977064-5977194)
chr5 (385-432)||(10084668-10084715)
chr5 (309-386)||(19050742-19050819)
chr5 (385-458)||(32734201-32734274)
chr5 (385-458)||(38471359-38471432)
chr5 (310-386)||(20988684-20988760)
chr5 (385-441)||(22819507-22819563)
chr5 (311-374)||(328212-328275)
chr5 (314-432)||(15509193-15509312)
chr5 (356-438)||(15857611-15857694)
chr5 (311-441)||(20991639-20991770)
chr5 (549-596)||(21387871-21387918)
chr5 (311-374)||(24805286-24805349)
chr5 (308-441)||(12830928-12831062)
chr5 (314-368)||(33362631-33362685)
chr5 (315-440)||(40058017-40058143)
chr5 (308-373)||(3076815-3076880)
chr5 (311-438)||(21389136-21389262)
chr5 (311-368)||(30912309-30912366)
chr5 (311-368)||(30916182-30916239)
chr5 (312-377)||(40059383-40059448)
chr5 (311-363)||(6914881-6914933)
chr5 (314-441)||(26912328-26912456)
chr5 (311-363)||(32411959-32412011)
[»] scaffold1974 (1 HSPs)
scaffold1974 (311-471)||(588-749)
[»] scaffold1878 (1 HSPs)
scaffold1878 (311-471)||(525-686)
[»] scaffold0290 (2 HSPs)
scaffold0290 (311-471)||(9438-9599)
scaffold0290 (311-438)||(8374-8502)
[»] scaffold0051 (2 HSPs)
scaffold0051 (313-447)||(39885-40020)
scaffold0051 (313-438)||(22125-22250)
[»] scaffold0003 (2 HSPs)
scaffold0003 (314-438)||(48449-48574)
scaffold0003 (312-458)||(47066-47213)
[»] scaffold2127 (1 HSPs)
scaffold2127 (311-434)||(512-636)
[»] scaffold0178 (2 HSPs)
scaffold0178 (311-438)||(2258-2386)
scaffold0178 (302-458)||(1198-1354)
[»] scaffold0024 (1 HSPs)
scaffold0024 (311-438)||(72979-73107)
[»] scaffold0046 (2 HSPs)
scaffold0046 (311-386)||(24861-24936)
scaffold0046 (311-401)||(23401-23492)
[»] scaffold0177 (1 HSPs)
scaffold0177 (311-436)||(1750-1876)
[»] scaffold0084 (2 HSPs)
scaffold0084 (316-485)||(13150-13320)
scaffold0084 (315-438)||(11705-11829)
[»] scaffold0098 (2 HSPs)
scaffold0098 (385-485)||(40978-41078)
scaffold0098 (389-434)||(42343-42388)
[»] scaffold0369 (1 HSPs)
scaffold0369 (313-421)||(12907-13016)
[»] scaffold0045 (2 HSPs)
scaffold0045 (316-448)||(77164-77297)
scaffold0045 (325-438)||(75754-75868)
[»] scaffold0012 (1 HSPs)
scaffold0012 (82-199)||(242653-242772)
[»] scaffold0015 (1 HSPs)
scaffold0015 (310-485)||(207744-207920)
[»] scaffold0007 (1 HSPs)
scaffold0007 (313-432)||(145868-145988)
[»] scaffold0013 (2 HSPs)
scaffold0013 (311-422)||(96155-96267)
scaffold0013 (311-386)||(96861-96936)
[»] scaffold0122 (1 HSPs)
scaffold0122 (311-491)||(15945-16121)
[»] scaffold0687 (1 HSPs)
scaffold0687 (311-386)||(6610-6685)
[»] scaffold0038 (1 HSPs)
scaffold0038 (313-409)||(25919-26016)
[»] scaffold0155 (1 HSPs)
scaffold0155 (311-386)||(5164-5239)
[»] scaffold0064 (1 HSPs)
scaffold0064 (314-386)||(20389-20461)


Alignment Details
Target: chr3 (Bit Score: 133; Significance: 8e-69; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 91 - 304
Target Start/End: Complemental strand, 29822652 - 29822439
Alignment:
Q  91 tatatgataatttatattatatttccttatttgtctttaatttcataagattaaaaatcacaaatgatcttcatctttctcttcatcttccaacttcatc 190  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  29822652 tatatgataatttatattatatttacttatttgtctttaatttcttaaaattaaaaatcacaaataatcttcatcttcctctttatcttccaacttcatc 29822553  T
Q  191 cccataacaaacnnnnnnntcccggcaacactaaacttcgtactcaaaattcaaactgaaataacaataaaattcatcatccaacaacatgttctagaac 290  Q
    ||||||||||||       | || ||||||| ||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| ||    
T  29822552 cccataacaaacaaaaaaattccagcaacacaaaacttcatactcaaaactcaaactgaaacaacaataaaattcatcatccaacaacatattctaggac 29822453  T
Q  291 tcaagtaatttttt 304  Q
    |||||||| |||||    
T  29822452 tcaagtaaattttt 29822439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 314 - 491
Target Start/End: Original strand, 19622003 - 19622181
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||||||| |||| |||||||| |||||| || ||| |||||||||| ||   |||||    
T  19622003 ttaatacatcatttggtcctttaagttatttttggttttcactttggtcccctaactataaagtgtctcaatttagtctcataaatcttctgctatttac 19622102  T
Q  413 tgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    || |||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||  || |||||| ||||||||    
T  19622103 tggtttggtcctctccgttagttttcaacatcaaatgtttaaggtgaactatgtttaaaggtggtccaccgtagacctt 19622181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 312 - 458
Target Start/End: Original strand, 53808314 - 53808461
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaat-tggtcccataaatcttttgtcgttt 410  Q
    ||||||||||||||||||||||||||  |||||| |||||| | |||||||  |||| |||||||| ||||||| |||||||||||||||| ||||||||    
T  53808314 gcttaatacatcatttggtcccttaacttattttcggttttgaatttggtctcctaactataaagtgtctcaatctggtcccataaatcttatgtcgttt 53808413  T
Q  411 actgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    ||| |||||||| ||||  ||||||||||||||||||| | |||||||    
T  53808414 actattttggtcatctccattagtttttaacatcaaatttctaaggtg 53808461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 311 - 450
Target Start/End: Original strand, 8371215 - 8371355
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||| ||||||||  ||||||| ||||||| |||||||| |||| |||||| | |||||||| ||| ||||||||||| ||  |||    
T  8371215 ggcttaatacatcatttgatcccttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataaatcttctgcagtt 8371314  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatat 450  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  8371315 tactattttggtcctctccgttagtttttaacatcaaatat 8371355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 42634007 - 42633883
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  |||||||| |||||| |||||||| |||| |||| ||| |||||| ||||||||||||||||| |||||||    
T  42634007 ggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactatagagtgtctcaatttggtcccataaatcttatgtcgtt 42633908  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    || | ||||||||||||||||||||    
T  42633907 tattattttggtcctctctgttagt 42633883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 308 - 433
Target Start/End: Complemental strand, 54654090 - 54653964
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||| ||||||||  ||| |||||||| |||||| |||||||||||| |||| ||||    
T  54654090 tttggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgtc 54653991  T
Q  407 gtttactgttttggtcctctctgttag 433  Q
    ||||||| ||||||||||||| |||||    
T  54653990 gtttactattttggtcctctccgttag 54653964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 42632700 - 42632825
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    ||||||||||||||||||||||||||||  || |||||||||||| |||||||| |||| |||||||| |||||| ||| ||||||||||||| ||||||    
T  42632700 tggcttaatacatcatttggtcccttaacttacttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttatgtcgt 42632799  T
Q  409 ttactgttttggtcctctctgttagt 434  Q
    ||||| |||| |||||||| ||||||    
T  42632800 ttactattttagtcctctccgttagt 42632825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 314 - 485
Target Start/End: Original strand, 39133015 - 39133187
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    ||||||||||||||| || |||||  ||||||||||||||| |||||||| |||| |||||||| |||||| |||||||| ||  |||| | |||||  |    
T  39133015 ttaatacatcatttgatctcttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctctcgttacc 39133114  T
Q  413 tgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccata 485  Q
    | |||||||||||||||||||||||||||||||||| | ||||||| || || ||||||  || |||||||||    
T  39133115 tcttttggtcctctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccata 39133187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 309 - 438
Target Start/End: Original strand, 7820383 - 7820513
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    ||||||||||||||  |||||||||||||  ||||||||  ||||| ||||||||||||| |||||||| | |||| |||| ||||||||| || |||||    
T  7820383 ttggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcctctaactataaagtgtttcaatttggacccataaattttatgtcg 7820482  T
Q  408 tttactgttttggtcctctctgttagttttt 438  Q
    |||||||||||||||||||| ||||||||||    
T  7820483 tttactgttttggtcctctccgttagttttt 7820513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 299 - 432
Target Start/End: Complemental strand, 10987786 - 10987652
Alignment:
Q  299 ttttttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaa 397  Q
    |||||| | ||||||||||||||||||||| ||||||||  ||||||||||||||| |||||||| |||| |||||||| |||||| |||||||||||||    
T  10987786 ttttttttttttggcttaatacatcatttgatcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaa 10987687  T
Q  398 tcttttgtcgtttactgttttggtcctctctgtta 432  Q
    | || || |||||  | ||||||||||||||||||    
T  10987686 ttttatgccgttttttattttggtcctctctgtta 10987652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 310 - 485
Target Start/End: Complemental strand, 17350224 - 17350048
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    ||||||||||||||||||||||||||||  ||||||||||||||| |||| ||| |||| |||||||| |||||| |||||||| ||  |||| |   ||    
T  17350224 tggcttaatacatcatttggtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtcccttatgtcttctcctgt 17350125  T
Q  409 ttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccata 485  Q
    |  || ||||||||||||| |||||||||||||||||||| | ||||||| || || ||||||  || |||||||||    
T  17350124 tacctcttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccata 17350048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 25583109 - 25583240
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||| |||||||||  |||||||| ||||||||||||||| |||| ||| ||   |||||| |||||||||||| |||| || ||||    
T  25583109 ggcttaatacatcatttagtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctgccgtt 25583208  T
Q  410 tactgttttggtcctctctgttagtttttaac 441  Q
    |||| |||||||||||||||||| ||||||||    
T  25583209 tactattttggtcctctctgttaatttttaac 25583240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 311 - 432
Target Start/End: Original strand, 41386125 - 41386247
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||| |||||||||||||  ||||||||||||||| |||||||| |||| |||||||| |||||| ||||| |||||||||||  | ||||    
T  41386125 ggcttaatacatcgtttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttacgacgtt 41386224  T
Q  410 tactgttttggtcctctctgtta 432  Q
    |||| ||||||||||||| ||||    
T  41386225 tactattttggtcctctccgtta 41386247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 43101896 - 43101998
Alignment:
Q  318 tacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactgtt 416  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||| |||| ||||| ||||| ||    
T  43101896 tacatcatttggtcccttaacttatttttggttttcattttggtcctctaattataaagtgtctcaatttggtcccataattcttctgtcgcttactatt 43101995  T
Q  417 ttg 419  Q
    |||    
T  43101996 ttg 43101998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 311 - 491
Target Start/End: Original strand, 47765434 - 47765614
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||| || || |||||  ||||||  |||||||||||||||| |||| |||||||| |||||| ||| |||| || |||||  || |||    
T  47765434 ggcttaatacatcatctgctctcttaacttattttccgttttcactttggtcc-ctaactataaagtgtctcaaattgatcccttatatcttccgttgtt 47765532  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    || |||||||||| |||| |||||||||||||||||||||| | ||||| || ||  ||||| ||| |||||||||||||||    
T  47765533 tattgttttggtcatctccgttagtttttaacatcaaatatcttaggtgaaccattgttaaagatggtccaccatagacctt 47765614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 29536709 - 29536837
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  ||||||||||| |  ||||||||| ||||| |||| |||||||| |||||||| |||||| ||||||||||||||||| | |||||    
T  29536709 ggcttaatacatgttttggtcccttgacttatttttggatttcattttgatcctctaactataaagtgtctcaatttggtcccataaatcttctttcgtt 29536808  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||| ||||||||||||| ||||| ||||    
T  29536809 tactattttggtcctctccgttagctttt 29536837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 41387554 - 41387430
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||||| |||| |||||| | |||||| ||||||||||||| |||    ||||    
T  41387554 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaaccttacaccgtt 41387455  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    |||| ||||||||||||| ||||||    
T  41387454 tactattttggtcctctccgttagt 41387430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 311 - 422
Target Start/End: Complemental strand, 51825742 - 51825630
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||| |||||||||||||||||  ||||||||| ||||||||||||||  ||| |||||||| | |||| ||||||||||||||||| |||||||    
T  51825742 ggcttaatatatcatttggtcccttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtcccataaatcttctgtcgtt 51825643  T
Q  410 tactgttttggtc 422  Q
    |||| ||||||||    
T  51825642 tactattttggtc 51825630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 301 - 438
Target Start/End: Complemental strand, 47855469 - 47855331
Alignment:
Q  301 ttttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatc 399  Q
    |||||| || ||||||||||||  |||||||||||||  ||||||||| ||||| ||||||||  ||| |||||||| |||||| ||||||| |||||||    
T  47855469 ttttattttaggcttaatacatgctttggtcccttaacttatttttggatttcattttggtccgttaactataaagtgtctcaatttggtcctataaatc 47855370  T
Q  400 ttttgtcgtttactgttttggtcctctctgttagttttt 438  Q
    || || |||||||| ||||||||||||| |||| |||||    
T  47855369 ttctgccgtttactattttggtcctctccgttatttttt 47855331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 309 - 441
Target Start/End: Complemental strand, 26799029 - 26798896
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    ||||||||||||||||||||||| |||||  ||||||||||||| | |||||||| |||| |||||| | |||||| |||||||||||| ||||    ||    
T  26799029 ttggcttaatacatcatttggtctcttaacttatttttggtttttattttggtcccctaactataaaatgtctcaatttggtcccataattcttcctccg 26798930  T
Q  408 tttactgttttggtcctctctgttagtttttaac 441  Q
    |||||  ||||||||||||| |||||||||||||    
T  26798929 tttaccattttggtcctctccgttagtttttaac 26798896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 308 - 432
Target Start/End: Complemental strand, 47808230 - 47808105
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    ||||||||||||||||| || |||||||||  ||||||||| |||||||||||| |  ||| |||||||| |||||| |||||| |||||||||| ||||    
T  47808230 tttggcttaatacatcacttagtcccttaacttatttttggatttcactttggttccttaactataaagtgtctcaatttggtctcataaatcttctgtc 47808131  T
Q  407 gtttactgttttggtcctctctgtta 432  Q
    |||| || ||||||||||||| ||||    
T  47808130 gtttgctattttggtcctctccgtta 47808105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 11220779 - 11220651
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  ||||||||  ||||| |||||||| |||| |||||||| |||||| ||||||| ||||||||| |||||||    
T  11220779 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcctataaatcttctgtcgtt 11220680  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||| ||||||||| ||| ||| ||||||    
T  11220679 tactattttggtcccctccgtttgttttt 11220651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 308 - 411
Target Start/End: Complemental strand, 51401475 - 51401371
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    |||||||||||||||  | |||||||||||  |||||||||||||||||||||||| |||| |||||||| |||||| ||||||||||||||||| || |    
T  51401475 tttggcttaatacatgctctggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgcc 51401376  T
Q  407 gttta 411  Q
    |||||    
T  51401375 gttta 51401371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 25585954 - 25585826
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||| || ||||||||||||||| |||||||  |||||||| ||||||||||| ||| ||   |||||| |||||| |||||||||| |||||||    
T  25585954 ggcttaatatattatttggtcccttaatttattttttattttcactctggtcctctaactattaaacgtctcaatttggtctcataaatcttctgtcgtt 25585855  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||| |||| ||| |||| ||||||||||    
T  25585854 tactattttagtcatctccgttagttttt 25585826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 312 - 426
Target Start/End: Complemental strand, 13078071 - 13077956
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttt 410  Q
    ||||||||||| ||| |||| |||||  |||||||| |||||| ||||||||||||| |||||| | ||| || ||||||||||||||||| ||||||||    
T  13078071 gcttaatacattattaggtctcttaacttatttttgattttcaatttggtcctctaagtataaaatgtcttaatttggtcccataaatcttatgtcgttt 13077972  T
Q  411 actgttttggtcctct 426  Q
    ||| |||||| |||||    
T  13077971 actattttggacctct 13077956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 311 - 399
Target Start/End: Complemental strand, 8372737 - 8372648
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatc 399  Q
    ||||||||| ||| |||||||||||||  ||||||||||||||| |||||||| |||| |||||||| |||||| |||||||||||||||    
T  8372737 ggcttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaatc 8372648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 310 - 438
Target Start/End: Original strand, 17345305 - 17345433
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||  ||||||| |||| || |||||||||||| ||||| || |||||||| | ||      
T  17345305 tggcttaatacattatttggtcccttaacttatttttggttttcaggttggtcccctaactaaaaagtatctcaatttggttccttaaatcttct-tctg 17345403  T
Q  409 ttactgttttggtcctctctgttagttttt 438  Q
    ||||  ||||||||||||| ||||||||||    
T  17345404 ttacctttttggtcctctccgttagttttt 17345433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 325 - 447
Target Start/End: Original strand, 11219439 - 11219562
Alignment:
Q  325 tttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcc 423  Q
    |||||||| ||||  ||||||||| ||||| |||||||| |||| |||||||| |||||||| |||| ||| | |||| || |||||||| ||||||||     
T  11219439 tttggtccgttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtca 11219538  T
Q  424 tctctgttagtttttaacatcaaa 447  Q
    |||| ||||| |||||||||||||    
T  11219539 tctccgttagattttaacatcaaa 11219562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 311 - 448
Target Start/End: Original strand, 51400210 - 51400348
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||||||||||||||||| | | |||| |||||||| |||||| || ||||||||||| ||  | |||     
T  51400210 ggcttaatacatgttttggtcccttaacttatttttggttttcactttgattccctaactataaagtgtctcaatttagtcccataaattttcagccgta 51400309  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaat 448  Q
    |||  |||||||||| || ||| ||||||||||| ||||    
T  51400310 taccattttggtcctttccgtttgtttttaacattaaat 51400348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 54752611 - 54752725
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  |||||||  |||||| ||| |||| |||| |||||||| |||||| |||||||  || ||||| || ||||    
T  54752611 ggcttaatacatcatttggtcccttaacttatttttcattttcaatttagtcccctaactataaagtgtctcaatttggtcctgtatatcttatgccgtt 54752710  T
Q  410 tactgttttggtcct 424  Q
    |||| ||||||||||    
T  54752711 tactattttggtcct 54752725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 9777068 - 9777181
Alignment:
Q  85 tcacaatatatgataatttatattatatttccttatttgtctttaatttcataagattaaaaatcacaaatgatcttcatc-tttctcttcatcttccaa 183  Q
    |||||| ||||||||||||||||||| ||||  | |||||||| |||||| ||| |||||||||||| ||  ||||||||| | |||| |  ||||||||    
T  9777068 tcacaacatatgataatttatattatctttctctgtttgtcttaaatttcctaaaattaaaaatcaccaacaatcttcatcatctctccttttcttccaa 9777167  T
Q  184 cttcatccccataa 197  Q
    ||||||||||||||    
T  9777168 cttcatccccataa 9777181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 49334458 - 49334330
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaat-tggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||  ||| || |  ||||||| ||||||| ||||||||| ||| |||||| | ||||||| |||||| ||||||||| |  ||||    
T  49334458 ggcttaatacatcatttaatcctttgacttattttttgttttcattttggtcctttaactataaattgtctcaatatggtccgataaatcttctaccgtt 49334359  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||| ||||| || |||||||||||||||    
T  49334358 tactattttgatcatctctgttagttttt 49334330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 53047892 - 53048023
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| |||||||| |||||| |||||||| ||  |||| |||||||    
T  53047892 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 53047991  T
Q  410 tactgttttggtcctctctgttagtttttaac 441  Q
      || ||||||||||||| ||||  |||||||    
T  53047992 acctcttttggtcctctccgttacattttaac 53048023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 356 - 441
Target Start/End: Original strand, 23559859 - 23559945
Alignment:
Q  356 tttggtcctctaattataaagtatctcaattgg-tcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaac 441  Q
    ||||||||  ||||||| |||| |||||||| | |||||||| |||| ||||||||||| ||||||||||||| |||||||||||||    
T  23559859 tttggtcccttaattattaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctccgttagtttttaac 23559945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 313 - 434
Target Start/End: Original strand, 47806815 - 47806936
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttta 411  Q
    ||||||||||||||| || ||||||  ||||||||| ||||| ||||||||  |||||||||||| |||||| ||| ||| ||||||||| ||  |||||    
T  47806815 cttaatacatcatttagtaccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttgatcctataaatcttctgctgttta 47806914  T
Q  412 ctgttttggtcctctctgttagt 434  Q
    |  ||||||||||||| ||||||    
T  47806915 c-attttggtcctctccgttagt 47806936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 53049158 - 53049032
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||| || ||| | |||||||| |||| |||||||| |||||| |||||||| ||  |||| |||||||    
T  53049158 ggcttaatacatgttttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 53049059  T
Q  410 tactgttttggtcctctctgttagttt 436  Q
      || ||||||||||||| ||||||||    
T  53049058 acctcttttggtcctctccgttagttt 53049032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 310 - 441
Target Start/End: Complemental strand, 48035446 - 48035314
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    |||||||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| |||||||| |||||| |||||||| ||  |||| || |||    
T  48035446 tggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttatgccgt 48035347  T
Q  409 ttactgttttggtcctctctgttagtttttaac 441  Q
    |  || ||||||||||||| ||||  |||||||    
T  48035346 tacctcttttggtcctctccgttacattttaac 48035314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 537 - 596
Target Start/End: Original strand, 8371442 - 8371501
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    |||||||||||||| ||  |||||||||||| ||||||||||||| ||||||||||||||    
T  8371442 gattgttggatcatatatagtctattgtattctattgtaaaccactaacacctaatattt 8371501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 9769412 - 9769345
Alignment:
Q  81 tgactcacaatatatgataatttatattatatttccttatttgtctttaatttcataagattaaaaat 148  Q
    |||||||||| ||||||||||||||||||| |||| |||||| |||| |||||| ||| |||||||||    
T  9769412 tgactcacaacatatgataatttatattatctttctttatttatcttgaatttcttaaaattaaaaat 9769345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 489
Target Start/End: Original strand, 32979083 - 32979262
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||| ||||||  |||||||||||||   ||||||   ||||| ||||||||||||| |||||||| |||||| ||| |||||||||| || ||   ||    
T  32979083 ggcttgatacatgctttggtcccttaactaatttttaaatttcattttggtcctctaactataaagtgtctcaatttgatcccataaattttctgcaatt 32979182  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacc 489  Q
      || ||||||||||||| ||||||||||||||| |||    ||||||| ||||| ||||||  || | |||||||||||    
T  32979183 acctcttttggtcctctccgttagtttttaacattaaaagactaaggtgaactatatttaaaggtggttcaccatagacc 32979262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 537 - 596
Target Start/End: Complemental strand, 34902888 - 34902829
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    ||||||||||||||||||||| |||||| ||||| ||| |||||| ||||||||||||||    
T  34902888 gattgttggatcatgtagggtttattgttttttagtgtgaaccactaacacctaatattt 34902829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 436
Target Start/End: Original strand, 39287480 - 39287591
Alignment:
Q  326 ttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactgttttggtcct 424  Q
    ||||||||||||  |||||| || ||||| ||||||||||||| |||||||| |||||| |||||||| ||  | || |||||||  || ||||||||||    
T  39287480 ttggtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtcccttatgttttctgtcgttacctcttttggtcct 39287579  T
Q  425 ctctgttagttt 436  Q
    ||| ||||||||    
T  39287580 ctccgttagttt 39287591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 375
Target Start/End: Original strand, 47854506 - 47854569
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaa 375  Q
    |||||||| ||  |||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  47854506 gcttaatatatgctttggtcccttaatttatttttggatttcattttggtcctctaattataaa 47854569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 541 - 596
Target Start/End: Original strand, 53808544 - 53808599
Alignment:
Q  541 gttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    ||||||||||||||| |||||||||||||| ||| |||||| ||||||||||||||    
T  53808544 gttggatcatgtaggatctattgtattttactgtgaaccactaacacctaatattt 53808599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 32973134 - 32973260
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| |||||||| |||||| |||||||| ||  |||| || ||||    
T  32973134 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgtt 32973233  T
Q  410 tactgttttggtcctctctgttagttt 436  Q
      || |||| |||||||| ||||||||    
T  32973234 acctctttttgtcctctccgttagttt 32973260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 47765661 - 47765719
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatatt 595  Q
    ||||||||||||||||||||||||||||||||||  || |||||| ||||| |||||||    
T  47765661 gattgttggatcatgtagggtctattgtattttagcgtgaaccactaacacttaatatt 47765719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 19253094 - 19253009
Alignment:
Q  340 tatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactgttttggtcct 424  Q
    ||||||||||||||| |||||||| ||||||||||| | |||||| ||| |||||||||| || || |||||||  ||||||||||    
T  19253094 tatttttggttttcaatttggtcccctaattataaaatgtctcaatttgatcccataaatattctgccgtttaccattttggtcct 19253009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 384
Target Start/End: Complemental strand, 19623040 - 19622967
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa 384  Q
    |||||||||||||| ||| ||||||||  ||||||| |||||||||||||||  |||| |||||||| ||||||    
T  19623040 ggcttaatacatcacttgctcccttaacttattttttgttttcactttggtctcctaactataaagtgtctcaa 19622967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 423
Target Start/End: Complemental strand, 55443671 - 55443558
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||| |  ||||| |||||||| |||| |||||||| |||||| |||||||| ||  ||||||||||||    
T  55443671 ggcttaatacatactttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgtt 55443572  T
Q  410 tactgttttggtcc 423  Q
      || |||||||||    
T  55443571 acctcttttggtcc 55443558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 298 - 386
Target Start/End: Complemental strand, 19579428 - 19579340
Alignment:
Q  298 attttttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||  ||||||||||||||||  |||||||||||||  |||||| || ||||| ||||||||  ||| |||||||| ||||||||    
T  19579428 atttttttagtttggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatt 19579340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 310 - 386
Target Start/End: Complemental strand, 32974345 - 32974269
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| |||||||| ||||||||    
T  32974345 tggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 32974269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 40502333 - 40502261
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||  |||||||||||||  ||||||||| ||| | |||||||| |||| |||||||||||||||||    
T  40502333 ttaatacatgttttggtcccttaacttatttttggattttattttggtcccctaactataaagtatctcaatt 40502261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 48336339 - 48336399
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    ||||||||||||||||||||| ||||||||  ||||||  ||||||| |||||||||||||    
T  48336339 tttggcttaatacatcatttgctcccttaacttattttcagttttcaatttggtcctctaa 48336399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 422
Target Start/End: Complemental strand, 49122123 - 49122011
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||| |||||||||||| ||||  ||||||||||||||| |||||||   ||| |||||||| |||||| |||||| ||||| | || || ||||    
T  49122123 ggcttaatatatcatttggtcctttaacttatttttggttttcattttggtctcttaactataaagtgtctcaatttggtctcataagttttctgccgtt 49122024  T
Q  410 tactgttttggtc 422  Q
    |||  ||||||||    
T  49122023 taccattttggtc 49122011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 422
Target Start/End: Original strand, 52292589 - 52292701
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| |||||||| |||||| || ||||| ||  ||||||||||||    
T  52292589 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttagtcccgtatgtcttttgtcgtt 52292688  T
Q  410 tactgttttggtc 422  Q
      || ||||||||    
T  52292689 acctcttttggtc 52292701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 33563944 - 33564019
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||||||||||||  ||||||||| ||||| ||| |||| |||| |||||||| ||||||||    
T  33563944 ggcttaatacatgttttggtcccttaacttatttttggatttcattttagtcccctaactataaagtgtctcaatt 33564019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 312 - 426
Target Start/End: Original strand, 36626727 - 36626842
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttt 410  Q
    |||||||| |||||||||||| ||||  ||||||   ||| || ||||||   |||| ||| |||| | |||| |||||||| |||||||| ||||||||    
T  36626727 gcttaatatatcatttggtcctttaacttattttctatttacaatttggtttcctaactatgaagtgtttcaatttggtcccttaaatcttatgtcgttt 36626826  T
Q  411 actgttttggtcctct 426  Q
    ||||||||||||||||    
T  36626827 actgttttggtcctct 36626842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 314 - 436
Target Start/End: Complemental strand, 52293641 - 52293518
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    |||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| |||||||| |||||| |||||||  ||  |||| | |||||  |    
T  52293641 ttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcctttatgtcttctatcgttacc 52293542  T
Q  413 tgttttggtcctctctgttagttt 436  Q
    | ||||||||||||| ||||||||    
T  52293541 tcttttggtcctctccgttagttt 52293518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 423
Target Start/End: Original strand, 5416196 - 5416306
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    |||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| |||||| | |||||| |||||||| ||  ||||||||||||  |    
T  5416196 ttaatacatactttggtcccttaacttattttcggatttcattttggtcccctaactataaaatgtctcaatttggtcccttatgtcttttgtcgttacc 5416295  T
Q  413 tgttttggtcc 423  Q
    | |||||||||    
T  5416296 tcttttggtcc 5416306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 14206901 - 14206844
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    |||||||||||| ||||||||||||||| ||||||  ||||| | |||||||||||||    
T  14206901 ggcttaatacattatttggtcccttaatttattttctgtttttaatttggtcctctaa 14206844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 14214649 - 14214592
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    |||||||||||| ||||||||||||||| ||||||  ||||| | |||||||||||||    
T  14214649 ggcttaatacattatttggtcccttaatttattttctgtttttaatttggtcctctaa 14214592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 35633224 - 35633297
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||  |||||||||||||  ||||||||| ||||| ||||||||| ||| |||||| | ||||||||    
T  35633224 cttaatacatgctttggtcccttaacttatttttggatttcattttggtcctataactataaaatgtctcaatt 35633297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 39288560 - 39288443
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  ||||||| |||||  |||||| || ||||| |||||||| |||| |||||||| |||||| |||||||| ||  |||| |||||||    
T  39288560 ggcttaatacatgctttggtcacttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttatgtcgtt 39288461  T
Q  410 tactgttttggtcctctc 427  Q
      || ||||||| |||||    
T  39288460 atctcttttggttctctc 39288443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 53809614 - 53809557
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    ||||||||||||||||| |||||||||  ||||||| ||||||| |||||||| ||||    
T  53809614 ggcttaatacatcatttagtcccttaacttattttttgttttcattttggtcccctaa 53809557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 541 - 593
Target Start/End: Complemental strand, 17349992 - 17349940
Alignment:
Q  541 gttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaata 593  Q
    |||| |||||||||||||||||| | |||||||| |||||| |||||||||||    
T  17349992 gttgaatcatgtagggtctattgaactttattgtgaaccactaacacctaata 17349940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 541 - 593
Target Start/End: Original strand, 39133243 - 39133295
Alignment:
Q  541 gttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaata 593  Q
    |||| |||||||| ||||||||||| |||||||| |||||| |||||||||||    
T  39133243 gttgaatcatgtaaggtctattgtactttattgtgaaccactaacacctaata 39133295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 2124069 - 2124148
Alignment:
Q  356 tttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcctctctgttagt 434  Q
    |||||| | |||| |||||| ||||| |||| ||||||||||||||| || |||||||| |||||||| |||| ||||||    
T  2124069 tttggttccctaactataaaatatcttaatttggtcccataaatcttatgccgtttactattttggtcatctccgttagt 2124148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 2225145 - 2225070
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||||||||||||  ||||||||| ||||| |||||||| |||| | |||| | ||||||||    
T  2225145 ggcttaatacatgctttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatt 2225070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 458
Target Start/End: Complemental strand, 7483541 - 7483498
Alignment:
Q  415 ttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    |||||||| |||| |||||||||||||||||||||| |||||||    
T  7483541 ttttggtcatctccgttagtttttaacatcaaatatctaaggtg 7483498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 7583465 - 7583540
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||||||| ||||  |||||| || ||||| |||||||| |||| |||||||| ||||||||    
T  7583465 ggcttaatacatgctttggtccattaacttattttcggatttcattttggtccactaactataaagtgtctcaatt 7583540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 7822107 - 7822032
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||||||||||||  || |||||| ||| | |||||||  ||||||||||||| ||||||||    
T  7822107 ggcttaatacatgctttggtcccttaacttaattttggattttattttggtctcctaattataaagtgtctcaatt 7822032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 491
Target Start/End: Complemental strand, 12062503 - 12062324
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgttta 411  Q
    ||||||||||| |  ||||||||||  ||||||   |||||| ||||||||  ||| ||| |||| |||||||| |||||||| | |||||||  |||||    
T  12062503 cttaatacatcctccggtcccttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgctgttta 12062404  T
Q  412 ctgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    || |||||||| | ||  |||||||||||| | |||| | ||||||| || |  |||| |  |||||||||||| |||||    
T  12062403 ctattttggtcatttccattagtttttaaccttaaatgtctaaggtgaaccaactttataggtgatccaccatatacctt 12062324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 534 - 593
Target Start/End: Original strand, 32979307 - 32979366
Alignment:
Q  534 gatgattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaata 593  Q
    ||||| ||||| || ||||||||| ||||||| ||||||||||| ||| |||||||||||    
T  32979307 gatgactgttgaattatgtagggtatattgtactttattgtaaatcactaacacctaata 32979366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 401
Target Start/End: Original strand, 48252928 - 48253019
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatctt 401  Q
    |||||||| |||  |||||||||||||  |||| || ||||| | |||||||| |||| |||||||| |||||| |||||||||||| ||||    
T  48252928 ggcttaatgcatgctttggtcccttaacttattctttgtttttattttggtcccctaactataaagtgtctcaatttggtcccataagtctt 48253019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 53342711 - 53342786
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||||| ||||||  |||||| || ||||| |||||||| |||| |||||||| ||||||||    
T  53342711 ggcttaatacatgctttggttccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 53342786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 325 - 422
Target Start/End: Complemental strand, 5417155 - 5417057
Alignment:
Q  325 tttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctca-attggtcccataaatcttttgtcgtttactgttttggtc 422  Q
    |||||||||||||  |||||| || ||||| |||||||| |||| |||||||| ||||| ||||||||| ||  |||||||| |||  || ||||||||    
T  5417155 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcagattggtcccttatgtcttttgttgttacctcttttggtc 5417057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 310 - 376
Target Start/End: Complemental strand, 24753612 - 24753547
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaag 376  Q
    |||||||||||||||||| |||  ||||| ||||||||||||| | |||||||| |||| |||||||    
T  24753612 tggcttaatacatcatttagtca-ttaatttatttttggtttttagtttggtcccctaactataaag 24753547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 29537185 - 29537135
Alignment:
Q  388 gtcccataaatcttttgtcgtttactgttttggtcctctctgttagttttt 438  Q
    |||||||||||||| || |||||||  ||||||||||||| ||||||||||    
T  29537185 gtcccataaatcttctgccgtttacaattttggtcctctccgttagttttt 29537135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 396
Target Start/End: Original strand, 30431370 - 30431456
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataa 396  Q
    ||||||||||||  |||||||||||||  ||||||||  ||||| ||||||||  ||||| |||| | |||||| ||||||||||||    
T  30431370 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaattttaaactgtctcaatttggtcccataa 30431456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 340 - 401
Target Start/End: Complemental strand, 47767042 - 47766981
Alignment:
Q  340 tatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatctt 401  Q
    ||||||||||||||| |||||||| |||| |||||||| |||||| |||||||||||| ||||    
T  47767042 tatttttggttttcattttggtcc-ctaactataaagtgtctcaatttggtcccataagtctt 47766981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 48338238 - 48338188
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggt 361  Q
    |||||||||||||||||||||||||||  ||||||  ||||||| ||||||    
T  48338238 ggcttaatacatcatttggtcccttaacttattttcagttttcaatttggt 48338188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 386
Target Start/End: Complemental strand, 53347118 - 53347045
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| |||||||| ||||||||    
T  53347118 gcttaatacatgctttggtcccttaacttattttcggatttcattttggtcc-ctaaatataaagtgtctcaatt 53347045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 419
Target Start/End: Original strand, 10986671 - 10986756
Alignment:
Q  335 taatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactgttttg 419  Q
    |||| ||||||||||||||||||||||||  ||| |||||||| | |||| ||||||| |||||| ||  | |||||||| |||||    
T  10986671 taatttatttttggttttcactttggtccattaactataaagtgtttcaatttggtcctataaattttacgccgtttactattttg 10986756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 5810251 - 5810211
Alignment:
Q  307 gtttggcttaatacatcatttggtcccttaatgtatttttg 347  Q
    |||||||||||||||| ||||||||||||||  ||||||||    
T  5810251 gtttggcttaatacatgatttggtcccttaacttatttttg 5810211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 306 - 441
Target Start/End: Original strand, 46446359 - 46446495
Alignment:
Q  306 tgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttg 404  Q
    |||| ||||||||||||  ||||||| |||||| |||||| |  ||| | |||||| |  |||||||||||| |||||||| |||||| ||  |||||||    
T  46446359 tgttaggcttaatacatgctttggtctcttaatttattttcgaattttattttggtgccttaattataaagtgtctcaattcggtcccttatgtcttttg 46446458  T
Q  405 tcgtttactgttttggtcctctctgttagtttttaac 441  Q
    | |||  || |||||||||| || ||||  |||||||    
T  46446459 ttgttatctcttttggtcctatccgttacattttaac 46446495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 396
Target Start/End: Complemental strand, 51214289 - 51214201
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataa 396  Q
    ||||||||||||||  |||||||||||||  ||||||||  ||||| ||||||||  ||| | |||| | |||||| ||||||||||||    
T  51214289 ttggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 51214201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 1e-52; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 90 - 306
Target Start/End: Complemental strand, 24546964 - 24546745
Alignment:
Q  90 atatatgataatttatattatatttccttatttgtctttaatttcataagattaaaaatcacaaatgatcttcatctttctcttcatcttccaacttcat 189  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  24546964 atatatgataatttctattatatttccttatttttctttaatttcttaaaattaaaaatcacaaataatcttcaccttcctcttcatcttccaacttcat 24546865  T
Q  190 ccccataacaaacnnnnnnntcc---cggcaacactaaacttcgtactcaaaattcaaactgaaataacaataaaattcatcatccaacaacatgttcta 286  Q
    |||||||||||||       | |   | ||||||| ||||||| ||||||||| ||||||||||| | |||||||||||||||||||||||||| || ||    
T  24546864 ccccataacaaacaaaaaaattccagcagcaacacaaaacttcatactcaaaactcaaactgaaacaccaataaaattcatcatccaacaacatatttta 24546765  T
Q  287 gaactcaagta-attttttat 306  Q
    | ||||||||| |||||||||    
T  24546764 g-actcaagtagattttttat 24546745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 91 - 298
Target Start/End: Complemental strand, 28931010 - 28930800
Alignment:
Q  91 tatatgataatttatattatatttccttatttgtctttaatttcataagattaaaaatcacaaatgatcttca---tctttctcttcatcttccaacttc 187  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||  |||||||   |||| ||||||||||| |||||||    
T  28931010 tatatgataatttatattatatttcattatttgtctttaatttcttaaaattaaaaatcacaaaaaatcttcatattcttcctcttcatctttcaacttc 28930911  T
Q  188 atccccataacaaacnnnnnnntcccggcaacactaaacttcgtactcaaaattcaaactgaaataacaataaaattcatcatccaacaacatgttctag 287  Q
    || ||||||||||||         || ||||||| ||||||| |||| |||| ||||||| ||| |||||||||||||||||||||||| ||| ||||||    
T  28930910 attcccataacaaacaaaaaaaatccagcaacacaaaacttcatacttaaaactcaaactaaaacaacaataaaattcatcatccaacaccatattctag 28930811  T
Q  288 aactcaagtaa 298  Q
     ||||||||||    
T  28930810 gactcaagtaa 28930800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 312 - 488
Target Start/End: Complemental strand, 18139607 - 18139430
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttt 410  Q
    ||||||||||||||||||||||||||  ||||||  |||||||||||| |||||||| |||||||| |||||| |||||||| || ||||| || |||||    
T  18139607 gcttaatacatcatttggtcccttaacttattttccgttttcactttgatcctctaactataaagtgtctcaaattggtcccttatatcttctgccgttt 18139508  T
Q  411 actgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagac 488  Q
    | |||||||||||||||  ||||||||||||||||||| | ||||||| || ||||||||| ||||||||||||||||    
T  18139507 attgttttggtcctctccattagtttttaacatcaaatgtctaaggtgaaccatgtttaaagatgatccaccatagac 18139430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 312 - 457
Target Start/End: Complemental strand, 33802137 - 33801991
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttt 410  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||| |||||||| ||| || ||| ||||||||||||| ||| ||||    
T  33802137 gcttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaatttgatcccataaatcttctgtagttt 33802038  T
Q  411 actgttttggtcctctctgttagtttttaacatcaaatatttaaggt 457  Q
    || || ||||||||||| |||||||||||||||||||||| ||||||    
T  33802037 accgtattggtcctctccgttagtttttaacatcaaatatctaaggt 33801991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 308 - 434
Target Start/End: Complemental strand, 8412440 - 8412313
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    ||||||||||||||| ||||||||||||||  ||||||| ||||||| ||| |||| |||| |||||||| |||||| ||||||||||||||||| || |    
T  8412440 tttggcttaatacattatttggtcccttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgcc 8412341  T
Q  407 gtttactgttttggtcctctctgttagt 434  Q
    ||||||| ||||||||||||| ||||||    
T  8412340 gtttactattttggtcctctccgttagt 8412313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 5311274 - 5311388
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||||||||||| ||| |||| |||| |||||||| |||||| ||||||| ||||||||| |||||||    
T  5311274 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcctataaatcttatgtcgtt 5311373  T
Q  410 tactgttttggtcct 424  Q
    |||| ||||||||||    
T  5311374 tactattttggtcct 5311388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 31738358 - 31738489
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||| |||||||||||||  ||||||||||||||| |||||||| |||| |||||||| | |||| |||||||||||| |||| ||  |||    
T  31738358 ggcttaatacatcctttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataagtcttctgcggtt 31738457  T
Q  410 tactgttttggtcctctctgttagtttttaac 441  Q
    |||  ||||||||||||| |||||||||||||    
T  31738458 taccattttggtcctctccgttagtttttaac 31738489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 314 - 438
Target Start/End: Complemental strand, 22300021 - 22299896
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    |||||||||  |||| ||||||||  |||||||||||||||||||||||| |||| |||||||| |||||| ||||||||||||||||| || |||||||    
T  22300021 ttaatacatgctttgatcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttac 22299922  T
Q  413 tgttttggtcctctctgttagttttt 438  Q
    | |||||||| |||| |||| |||||    
T  22299921 tattttggtcatctccgttatttttt 22299896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 314 - 438
Target Start/End: Original strand, 27438788 - 27438913
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    ||||||||||||||||||||||||  ||||||||| ||||| ||||||||| ||| |||||||| |||||| ||| |||||||||| || || |||||||    
T  27438788 ttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttac 27438887  T
Q  413 tgttttggtcctctctgttagttttt 438  Q
    | |||||||| |||| |||| |||||    
T  27438888 tcttttggtcatctccgttaattttt 27438913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 309 - 412
Target Start/End: Complemental strand, 34084255 - 34084153
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||||||  |||| |||||||| |||||| |||||| |||||||||| |||||    
T  34084255 ttggcttaatacatcatttggtcccttaacttatttctggttttcactttggtc--ctaaatataaagtgtctcaatttggtctcataaatcttctgtcg 34084158  T
Q  408 tttac 412  Q
    |||||    
T  34084157 tttac 34084153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 33807684 - 33807812
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||| ||||| ||||||||  ||||||||||||||||||||||||  ||| |||||||| |||||| ||| | |||||||| || || ||||    
T  33807684 ggcttaatacattatttgatcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaatttgatgccataaattttctgccgtt 33807783  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    ||| |||||||||||||| |||| |||||    
T  33807784 taccgttttggtcctctccgttaattttt 33807812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 313 - 432
Target Start/End: Original strand, 8411083 - 8411203
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttta 411  Q
    ||||||||||||||| || ||||||  ||||||||||||||| ||| |||| |||| |||||||| |||||| ||||||  ||||||||| || ||||||    
T  8411083 cttaatacatcatttagttccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcttataaatcttatgccgttta 8411182  T
Q  412 ctgttttggtcctctctgtta 432  Q
    || ||||||||||||| ||||    
T  8411183 ctattttggtcctctccgtta 8411203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 312 - 458
Target Start/End: Complemental strand, 27440295 - 27440148
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgttt 410  Q
    ||||||||||||||||||||||||||  ||||||||  ||||| |||| |||  ||| | |||| | |||||||| ||||||||||||||| |  |||||    
T  27440295 gcttaatacatcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgttt 27440196  T
Q  411 actgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    ||| ||||||||||||| |||| |||||||| | |||| | |||||||    
T  27440195 actattttggtcctctccgttaatttttaactttaaatgtctaaggtg 27440148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 2138758 - 2138632
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||| ||||||||| ||| | |||||||| |||| |||||||| |||||| || ||||| ||  |||| |||||||    
T  2138758 ggcttaatacatgttttggtcccttaatttatttttggattttattttggtcccctaactataaagtgtctcaatttagtcccttatgtcttctgtcgtt 2138659  T
Q  410 tactgttttggtcctctctgttagttt 436  Q
      || ||||||||||||||||||||||    
T  2138658 acctcttttggtcctctctgttagttt 2138632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 31740393 - 31740265
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||| ||||  ||||||| ||||||| ||||||||  ||| |||||||| |||||| ||||||||||||||||| || ||||    
T  31740393 ggcttaatacatggtttggtcctttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttatgccgtt 31740294  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||  |||||||||| || ||| ||||||    
T  31740293 taccattttggtcctatccgtttgttttt 31740265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 9927601 - 9927731
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||| ||| |||||||||||  ||||||| ||||| | |||||||| |||| |||||||| |||||| ||||||||||||| |||   |||||    
T  9927601 ggcttaatacagcatctggtcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtcccataaa-cttcaatcgtt 9927699  T
Q  410 tactgttttggtcctctctgttagtttttaac 441  Q
    |||| |||||||| |||| |||| ||||||||    
T  9927700 tactattttggtcatctccgttaatttttaac 9927731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 308 - 491
Target Start/End: Complemental strand, 293765 - 293580
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttg-gttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgt 405  Q
    |||||||||||| || |||||||| |||||| |||||||  ||||||| |||| ||  ||||||||||||| | |||||| |||| ||||| |||| |||    
T  293765 tttggcttaatatattatttggtctcttaatttatttttttgttttcaatttgatctcctaattataaagtgtttcaatttggtctcataagtcttctgt 293666  T
Q  406 cgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    |||||||  ||||||||||||| |||  |||||||| | |||| | ||||||| || |  |||| |  || |||||||||||||||    
T  293665 cgtttaccattttggtcctctccgtttatttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagacctt 293580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 308 - 436
Target Start/End: Complemental strand, 19368642 - 19368513
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    |||||||||||||||  |||||||||||||  |||||| || ||||| ||||||||||||| |||||||| |||||| |||||| | ||  |||| ||||    
T  19368642 tttggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtctcttatgtcttctgtc 19368543  T
Q  407 gtttactgttttggtcctctctgttagttt 436  Q
    |||  || |||| |||||||| ||||||||    
T  19368542 gttacctcttttagtcctctccgttagttt 19368513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 537 - 596
Target Start/End: Complemental strand, 33801911 - 33801852
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||| | ||||||    
T  33801911 gattgttggatcatgtagggtctattgttttttattataaaccaccaacacttgatattt 33801852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 311 - 383
Target Start/End: Original strand, 22298599 - 22298671
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctca 383  Q
    ||||||||||||  |||||||| ||||  ||||||||||||||| ||||||||||||||| |||||| |||||    
T  22298599 ggcttaatacatgctttggtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctca 22298671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 14328820 - 14328714
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccat 484  Q
    |||||| ||||| |||||||||||||||| ||||||||||||| |||| |||||||| | |||| | ||||||| || |  |||| |  || ||||||||    
T  14328820 ttggtctcataattcttttgtcgtttactattttggtcctctccgttactttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccat 14328721  T
Q  485 agacctt 491  Q
    |||||||    
T  14328720 agacctt 14328714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 14421830 - 14421724
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccat 484  Q
    |||||| ||||| |||||||||||||||| ||||||||||||| |||| |||||||| | |||| | ||||||| || |  |||| |  || ||||||||    
T  14421830 ttggtctcataattcttttgtcgtttactattttggtcctctccgttactttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccat 14421731  T
Q  485 agacctt 491  Q
    |||||||    
T  14421730 agacctt 14421724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 299 - 424
Target Start/End: Original strand, 26581936 - 26582061
Alignment:
Q  299 ttttttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaa 397  Q
    |||||| | ||||||||| |||||  |||||||||||||  ||||||||| ||| | ||||||||  ||| ||||||||  ||||| |||||||| || |    
T  26581936 ttttttttttttggcttagtacatgttttggtcccttaacttatttttggattttattttggtcccttaactataaagtgactcaatttggtcccttata 26582035  T
Q  398 tcttttgtcgtttactgttttggtcct 424  Q
    |||||||||| ||||| ||||||||||    
T  26582036 tcttttgtcg-ttactcttttggtcct 26582061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 18773649 - 18773777
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||| ||||||||  ||||||||| ||||| |||||||| ||||||||||| | |||||| |||||||| ||  || | |   |||    
T  18773649 ggcttaatacatgctttgatcccttaacttatttttggatttcattttggtcccctaattataaaatgtctcaatttggtcccttatgtcctctcgtgtt 18773748  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
      || ||||||||||||||||||||||||    
T  18773749 accttttttggtcctctctgttagttttt 18773777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 9754223 - 9754148
Alignment:
Q  85 tcacaatatatgataatttatattatatttccttatttgtctttaatttcataagattaaaaatcacaaatgatct 160  Q
    ||||| |||||||||||||||||||| |||  ||||||||||  |||||| ||| |||||||||||| ||| ||||    
T  9754223 tcacagtatatgataatttatattatctttttttatttgtctcgaatttcctaaaattaaaaatcaccaataatct 9754148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 580
Target Start/End: Complemental strand, 18139380 - 18139337
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaacca 580  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  18139380 gattgttggatcatgtagggtctattgtattttactgtgaacca 18139337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 340 - 436
Target Start/End: Original strand, 34083082 - 34083180
Alignment:
Q  340 tatttttggttttcactttggtcctctaattataaagtatctcaa--ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagttt 436  Q
    ||||||| |||||||||||||||  ||||||||||| | ||||||  ||| || ||||||| ||  |||||||||| ||||| |||| |||||||||||    
T  34083082 tatttttagttttcactttggtctcctaattataaactgtctcaaatttgatctcataaattttcagtcgtttactattttgatcctttctgttagttt 34083180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 309 - 386
Target Start/End: Original strand, 13173030 - 13173107
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||||  |||||||||||||  |||||| || ||| | |||||||| |||| |||||||| ||||||||    
T  13173030 ttggcttaatacatgctttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatt 13173107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 313 - 409
Target Start/End: Original strand, 28225421 - 28225518
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||  |||||||||||||  |||||| |  ||||| |||||||| |||| |||||||| |||||| |||||||| ||  ||||||||||||    
T  28225421 cttaatacatgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgtt 28225518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 471
Target Start/End: Complemental strand, 13507178 - 13507131
Alignment:
Q  424 tctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaa 471  Q
    ||||||||||||||||||||||||| ||||||||| || || ||||||    
T  13507178 tctctgttagtttttaacatcaaatgtttaaggtgaaccatatttaaa 13507131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 12203395 - 12203306
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataa 396  Q
    |||||||||||||||  ||| |||||||||  ||||||||  ||||| ||||||||| ||| | |||| | |||||| ||||||||||||    
T  12203395 tttggcttaatacatgctttagtcccttaacttatttttgaatttcattttggtcctttaactttaaactgtctcaatttggtcccataa 12203306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 422
Target Start/End: Original strand, 19367711 - 19367824
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    |||||||||||||  ||| |||||||||  |||||| |  ||||| |||||||| |||| |||||||| |||||| |||||||| ||  |||||||| ||    
T  19367711 tggcttaatacatgctttcgtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgttgt 19367810  T
Q  409 ttactgttttggtc 422  Q
    |  || ||||||||    
T  19367811 taccttttttggtc 19367824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 549 - 593
Target Start/End: Complemental strand, 34084116 - 34084072
Alignment:
Q  549 atgtagggtctattgtattttattgtaaaccaccaacacctaata 593  Q
    ||||||||||||||||| |||| ||| |||||| |||||||||||    
T  34084116 atgtagggtctattgtactttactgtgaaccactaacacctaata 34084072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 92; Significance: 2e-44; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 313 - 491
Target Start/End: Complemental strand, 56819 - 56640
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgttta 411  Q
    ||||||| |||||||||||||||||  ||||||| | |||||||||||||| ||||||||||||| |||||||| ||||| ||||||||| || ||||||    
T  56819 cttaataaatcatttggtcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtcctataaatcttctgccgttta 56720  T
Q  412 ctgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    |||||| | |||||||| ||||||||||||||||||||| |||||   |||||||||||| ||| ||||||| |||||||    
T  56719 ctgtttagatcctctctattagtttttaacatcaaatatctaagggaaactatgtttaaagatggtccaccaaagacctt 56640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 54594 - 54677
Alignment:
Q  319 acatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatctt 401  Q
    ||||||||||| ||||||| ||| |||||||||| | ||||||||| |||||||||||| |||||| |||||||||||||||||    
T  54594 acatcatttggccccttaacgtaattttggtttttattttggtcctttaattataaagtgtctcaatttggtcccataaatctt 54677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 534 - 596
Target Start/End: Complemental strand, 56596 - 56533
Alignment:
Q  534 gatgattgttggatcatgtagggt-ctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    |||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||    
T  56596 gatgattgttggatcacgtagtgttctattgtattttattgtaaaccaccaacacctaatattt 56533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 79)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 297 - 491
Target Start/End: Original strand, 117029 - 117224
Alignment:
Q  297 aattttttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaattgg-tcccata 395  Q
    |||||||| |||||| ||||||||||| |||| ||||||||  ||||||||||||||| |||||||| ||||||||||| | | |||||| | |||||||    
T  117029 aattttttttgtttgccttaatacatcgtttgatcccttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttgatcccata 117128  T
Q  396 aatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    |||||| ||||||||| ||||||||||||||| |||||||||||||||||||| | |||||||    |||||||||  || |||||||||||||||    
T  117129 aatcttctgtcgtttattgttttggtcctctccgttagtttttaacatcaaatgtctaaggtgagtcatgtttaaaggtggtccaccatagacctt 117224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 312 - 447
Target Start/End: Complemental strand, 37276363 - 37276227
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgttt 410  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| |||  ||| |||||||| |||||||| |||||||||||||||||| |||||    
T  37276363 gcttaatacatcatttggtcccttaatttatttttgattttcactttgatcccttaactataaagtgtctcaatttggtcccataaatcttttgccgttt 37276264  T
Q  411 actgttttggtcctctctgttagtttttaacatcaaa 447  Q
    | | | |||||||||||||||||||||||||||||||    
T  37276263 attatattggtcctctctgttagtttttaacatcaaa 37276227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 303 - 491
Target Start/End: Complemental strand, 39546806 - 39546617
Alignment:
Q  303 ttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatctt 401  Q
    |||| |||||||||||||||| ||| || ||||||  ||||||  |||||||||||||| | |||| | |||||| |||||||| |||||||||||| ||    
T  39546806 ttatttttggcttaatacatccttttgttccttaacttattttctgttttcactttggttccctaactttaaagtgtctcaatttggtcccataaatatt 39546707  T
Q  402 ttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
     || ||||||| ||||||||| |||| |||||||||||||||||||| |||||| || || |||||||||  || |||||||| ||||||    
T  39546706 atgccgtttaccgttttggtcatctccgttagtttttaacatcaaatgtttaagatgaaccatgtttaaaggtggtccaccatggacctt 39546617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 311 - 458
Target Start/End: Complemental strand, 16363933 - 16363785
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||| || ||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| | ||  |||    
T  16363933 ggcttaatatataatttggtcccttaacttatttttggttttcactttggtcctctaactataaagtatctcaatttgatcccataaatcgtctgctgtt 16363834  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    |||| ||||||||||||| ||||||| ||||| | |||| | |||||||    
T  16363833 tactattttggtcctctccgttagttattaactttaaatgtctaaggtg 16363785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 311 - 458
Target Start/End: Original strand, 36756059 - 36756207
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaat-tggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||| ||||| | ||||||||  ||| |||||||| | ||||| ||||| |||||||||| |||||||    
T  36756059 ggcttaatacatcatttggtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtcacataaatcttatgtcgtt 36756158  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    |||| |||||||| |||| |||||||||||||||||||| | |||||||    
T  36756159 tactattttggtcatctccgttagtttttaacatcaaatttctaaggtg 36756207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 38591131 - 38591011
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||| |||||||| |||| |||||||| |||||| ||||||||||||||||| || |    
T  38591131 tttggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgcc 38591032  T
Q  407 gtttactgttttggtcctctc 427  Q
    ||||||| |||||||||||||    
T  38591031 gtttactattttggtcctctc 38591011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 311 - 432
Target Start/End: Complemental strand, 31625504 - 31625383
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||| ||| ||||  ||||||||||||||| |||||||| ||||||||||||| |||||||| |||||||||||||||||| ||||    
T  31625504 ggcttaatacatcatttgatcc-ttaacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtcccataaatcttttgccgtt 31625406  T
Q  410 tactgttttggtcctctctgtta 432  Q
    |||| ||||||||||||| ||||    
T  31625405 tactattttggtcctctccgtta 31625383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 311 - 491
Target Start/End: Original strand, 36070173 - 36070354
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||||| |||| |||||||| |||||| ||| ||||||||||||| || ||||    
T  36070173 ggcttaatacatcatttgatcccttaatttatttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttctgccgtt 36070272  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    |||| ||||||||||| | |||||| ||| || | |||| | ||||||| || |  |||| |  || |||||||||||||||    
T  36070273 tactattttggtcctccccgttagtctttgaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagacctt 36070354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 311 - 432
Target Start/End: Original strand, 31623901 - 31624023
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||||| |||| |||||||| | |||| ||||||||||||||||| |||||||    
T  31623901 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataaatcttatgtcgtt 31624000  T
Q  410 tactgttttggtcctctctgtta 432  Q
    || | |||| |||||||| ||||    
T  31624001 tattattttagtcctctccgtta 31624023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 309 - 434
Target Start/End: Complemental strand, 41868039 - 41867913
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||| |||||||| |||||| |||||||||||||| || || ||    
T  41868039 ttggcttaatacatcatttggtcccttaatttatttttagttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttatgccg 41867940  T
Q  408 tttactgttttggtcctctctgttagt 434  Q
    |||  | |||| |||||||| ||||||    
T  41867939 ttttttattttagtcctctccgttagt 41867913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 334 - 491
Target Start/End: Original strand, 7486095 - 7486253
Alignment:
Q  334 ttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcctctctgtta 432  Q
    ||||| ||||||||||||||| |||| |||  ||| ||||||||   |||||| ||||||||||||||||||  ||||||| ||||||||||||| ||||    
T  7486095 ttaatttatttttggttttcattttgatcccttaactataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtcctctccgtta 7486194  T
Q  433 gtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    |||||||||||||||| | ||| ||| || |||||||||  |  |||||||||||||||    
T  7486195 gtttttaacatcaaatgtctaaagtgaaccatgtttaaatgttgtccaccatagacctt 7486253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 311 - 487
Target Start/End: Original strand, 35943902 - 35944080
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattat-aaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    ||||||||||||| |||||||||||||  ||||||||||||||| ||||||||  ||||||| ||| | |||||| ||||||||||||||||| ||  ||    
T  35943902 ggcttaatacatcgtttggtcccttaacttatttttggttttcattttggtcccttaattataaaaatgtctcaatttggtcccataaatcttatgcagt 35944001  T
Q  409 ttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccataga 487  Q
    ||||| |||||||| |||| ||||||||||||| | |||| | ||||||| || |  |||| |  ||||||||||||||    
T  35944002 ttactattttggtcatctccgttagtttttaactttaaatgtctaaggtgaaccaactttataggtgatccaccataga 35944080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 37472398 - 37472512
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||| |||| ||||  ||||||||||||| | ||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||    
T  37472398 ggcttaatacatcatttcgtcctttaacttatttttggtttttaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttttgtcgtt 37472497  T
Q  410 tactgttttggtcct 424  Q
    |||  ||||||||||    
T  37472498 taccattttggtcct 37472512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 311 - 419
Target Start/End: Original strand, 38589816 - 38589924
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||| ||||||| ||||||||||||| ||||||||  ||||| ||||||||||||||||| |||||||    
T  38589816 ggcttaatacatcatttggtcccttaacttattttt-gttttcaatttggtcctctaactataaagtggctcaatttggtcccataaatcttatgtcgtt 38589914  T
Q  410 tactgttttg 419  Q
    |||| |||||    
T  38589915 tactattttg 38589924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 312 - 438
Target Start/End: Complemental strand, 36940153 - 36940026
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttt 410  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||| ||| |||| |||||||| | |||| |||||  |||||||||| || |||||    
T  36940153 gcttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggtatcataaatcttctgccgttt 36940054  T
Q  411 actgttttggtcctctctgttagttttt 438  Q
    ||| |||||||| |||| |||| |||||    
T  36940053 actattttggtcatctccgttaattttt 36940026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 310 - 438
Target Start/End: Original strand, 37274880 - 37275010
Alignment:
Q  310 tggcttaatacat-catttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaattggt-cccataaatcttttgtcg 407  Q
    ||||||||||||| | |||||| | ||||  ||||||||| ||||| ||||||||||||| |||||||| |||||||| || |||||||||||| || ||    
T  37274880 tggcttaatacatgcttttggttctttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttgttcccataaatcttctgccg 37274979  T
Q  408 tttactgttttggtcctctctgttagttttt 438  Q
    |||||| ||||||||||||| ||||||||||    
T  37274980 tttactattttggtcctctccgttagttttt 37275010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 24068325 - 24068453
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  ||||||||||||||| |||||||| |||| |||||||| |||||| |||||||||||| ||||    ||||    
T  24068325 ggcttaatacatgctttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtt 24068424  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    ||||  |||||||||||| ||||||||||    
T  24068425 tactaatttggtcctctccgttagttttt 24068453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 309 - 491
Target Start/End: Original strand, 10052097 - 10052280
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc-aattggtcccataaatcttttgtcg 407  Q
    ||||||||||| |||||||||||||||||  |||| ||| ||||||||||||||| ||||||||||||| |||| |||||||||| ||  || | || ||    
T  10052097 ttggcttaatatatcatttggtcccttaacttattcttgattttcactttggtcccctaattataaagtgtctcaaattggtcccttatgtcatctgccg 10052196  T
Q  408 tttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    ||  || |||||||| ||||  |||||||||||||| |||| | |||| || || || ||||||  || ||||||||| |||||    
T  10052197 ttacctcttttggtcatctcctttagtttttaacattaaatgtctaagatgaaccatatttaaaggtggtccaccataaacctt 10052280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 314 - 488
Target Start/End: Original strand, 19913490 - 19913665
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    |||||||||| |||||||||||||  ||||||||  ||||| ||||||||||||| |||||||| | |||| |||||||||||| |||| ||  |||||     
T  19913490 ttaatacatcctttggtcccttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtcccataagtcttctgcggtttat 19913589  T
Q  413 tgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagac 488  Q
      ||||||||||||| ||||||||||||| | |||| | ||||||| || |  |||| | ||| ||||||||||||    
T  19913590 cattttggtcctctccgttagtttttaaccttaaatttctaaggtgaaccaactttatagatggtccaccatagac 19913665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 308 - 401
Target Start/End: Original strand, 37323340 - 37323434
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatctt 401  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | |||| |||||| | |||||| ||| |||||||||||||    
T  37323340 tttggcttaatacatcatttggtcccttaatttatttttggttttcaatttggttccctaactataaaatgtctcaatttgatcccataaatctt 37323434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 302 - 398
Target Start/End: Complemental strand, 29739773 - 29739676
Alignment:
Q  302 tttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaat 398  Q
    ||||| || ||||||||||||||||||||| |||||| ||||||||||||||| |||| ||| |||| |||||||| |||||| ||||||||||||||    
T  29739773 tttattttaggcttaatacatcatttggtctcttaatttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaat 29739676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 539 - 596
Target Start/End: Complemental strand, 41522613 - 41522556
Alignment:
Q  539 ttgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41522613 ttgttggatgatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 41522556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 10053865 - 10053737
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||||||||  ||| |||||||| |||||| |||||||| ||  |||| |||||||    
T  10053865 ggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaagttggtcccttatgtcttatgtcgtt 10053766  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
      || ||||||| ||||| |||| |||||    
T  10053765 acctcttttggttctctccgttaattttt 10053737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 311 - 491
Target Start/End: Complemental strand, 13367171 - 13366990
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||  ||  ||||||  ||||||   |||||||||||||||  ||| |||||||| | | |||| ||||||||||||||| || ||||    
T  13367171 ggcttaatacatcatccggatccttaacttattttattttttcactttggtcccttaactataaagtgttttaatttggtcccataaatcttctgccgtt 13367072  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    |||| ||||||||||||| ||||||||||||| | |||| | ||||||| || |  |||| |  || |||||||||||||||    
T  13367071 tactattttggtcctctccgttagtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagacctt 13366990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 41866889 - 41867013
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||| |||||||||||||||  |||||||| ||||||||||| |||  ||| |||||||| | |||| |||||||||||||| ||  | | ||    
T  41866889 ggcttaatacaccatttggtcccttaacttatttttgattttcactttgatcccttaactataaagtgtttcaatttggtcccataaattttacgccatt 41866988  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    |||| |||||||| |||||||||||    
T  41866989 tactattttggtcatctctgttagt 41867013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 43275745 - 43275869
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||||||| |||||  ||||||| ||||||| |||||| | |||| |||||||| |||||| || ||||||||| |||| || ||||    
T  43275745 ggcttaatacatcatttggtctcttaacttattttttgttttcaatttggttccctaactataaagtgtctcaatttagtcccataactcttatgccgtt 43275844  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    || | ||||||||||| | ||||||    
T  43275845 tattattttggtcctcaccgttagt 43275869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 45385915 - 45385787
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  ||||||||| ||||| ||||||||  |||||||||||| | |||| ||| ||| ||||||||| |||||||    
T  45385915 ggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcccataattataaagtgtttcaatttgatcctataaatcttatgtcgtt 45385816  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||  |||| |||||||| ||||| ||||    
T  45385815 taccattttagtcctctccgttagatttt 45385787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 340 - 434
Target Start/End: Complemental strand, 27750713 - 27750618
Alignment:
Q  340 tatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagt 434  Q
    ||||||||||||||| |||| |||  ||||||||||||||||||| ||||||||||||||||| | | ||||||| |||||||| |||| ||||||    
T  27750713 tatttttggttttcaatttgatccgttaattataaagtatctcaatttggtcccataaatcttatattgtttactattttggtcttctccgttagt 27750618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 311 - 401
Target Start/End: Complemental strand, 43386823 - 43386732
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatctt 401  Q
    ||||||||||||||| |||||||||||  ||||||||||||||| |||||||| |||| |||||| | |||||| |||||||||||| ||||    
T  43386823 ggcttaatacatcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataactctt 43386732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 315 - 411
Target Start/End: Original strand, 14820192 - 14820289
Alignment:
Q  315 taatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttta 411  Q
    |||||||||| ||||||||||||  ||||||||| ||| | |||||||| |||| |||||||| |||||| || |||||||||||||| |||||||||    
T  14820192 taatacatcaattggtcccttaacttatttttggattttaatttggtcccctaactataaagtgtctcaatttagtcccataaatcttatgtcgttta 14820289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 21267162 - 21267234
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||  ||||||| |||||  ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  21267162 ttaatacattgtttggtcgcttaacttatttttggttttcactttggtcctctaactataaagtgtctcaatt 21267234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 310 - 485
Target Start/End: Original strand, 21961817 - 21961993
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    ||||||||||||||||||||||||||||| ||||||||  ||||| |||  ||  ||||||| |||   |||||| ||| |||| ||  |||| |  |||    
T  21961817 tggcttaatacatcatttggtcccttaatttatttttgactttcattttaatctcctaattaaaaaacgtctcaaattgatcccttatgtcttcttccgt 21961916  T
Q  409 ttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccata 485  Q
    |  || ||||||||||||| |||||||||||||||||||| | | ||||| || |||||||||  || |||||||||    
T  21961917 tatctcttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccata 21961993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 537 - 596
Target Start/End: Original strand, 117269 - 117328
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||  ||||||||    
T  117269 gattgttggatcatataggatctattgtattttattgtaaaccaccaacatttaatattt 117328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 537 - 596
Target Start/End: Original strand, 7486299 - 7486358
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    ||||||| |||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  7486299 gattgttagatcatataagatctattgtattttattgtaaaccaccaacacctaatattt 7486358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 325 - 491
Target Start/End: Complemental strand, 12281886 - 12281720
Alignment:
Q  325 tttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaattg-gtcccataaatcttttgtcgtttactgttttggtcc 423  Q
    |||| ||||||||| |||||||| |||||||||||||||  ||| |||||| | ||||||||  ||| | ||||| || |  ||||||| |||||| |||    
T  12281886 tttgatcccttaatttatttttgattttcactttggtcccgtaactataaattgtctcaattttgtctcgtaaattttcta-cgtttaccgttttgatcc 12281788  T
Q  424 tctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    |||| |||||||||||||||||||||| ||| ||| || ||| || ||  || ||||||||| |||||    
T  12281787 tctccgttagtttttaacatcaaatatctaatgtggaccatgattcaaggtggtccaccatatacctt 12281720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 537 - 596
Target Start/End: Complemental strand, 13363472 - 13363413
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    |||||||||||||||||||||||||||||||||  ||| |||||| ||||||||||||||    
T  13363472 gattgttggatcatgtagggtctattgtatttttgtgtgaaccactaacacctaatattt 13363413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 29738286 - 29738417
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||| |||||||||||||  |||||||  |||||| |||||||   ||| |||||||| |||||| || ||| ||||| |||| || ||||    
T  29738286 ggcttaatacatcgtttggtcccttaacttattttttattttcaatttggtctattaactataaagtgtctcaatttagtctcataagtcttctgccgtt 29738385  T
Q  410 tactgttttggtcctctctgttagtttttaac 441  Q
    |||  ||||||||||||| ||| |||||||||    
T  29738386 tacctttttggtcctctccgtttgtttttaac 29738417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 534 - 592
Target Start/End: Original strand, 10052323 - 10052381
Alignment:
Q  534 gatgattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaat 592  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||| | ||||||||    
T  10052323 gatgattgttggatcatgtagggtctattgtattttactgtgaaccactaccacctaat 10052381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 325 - 442
Target Start/End: Complemental strand, 24069553 - 24069435
Alignment:
Q  325 tttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactgttttggtcc 423  Q
    |||||||||||||  ||||||||||||||| |||| |||  ||| |||||||| |||||| |||||||||||| |||| || |||||||  |||||||||    
T  24069553 tttggtcccttaacttatttttggttttcattttgatcccttaactataaagtgtctcaatttggtcccataactcttctgccgtttaccattttggtcc 24069454  T
Q  424 tctctgttagtttttaaca 442  Q
    | || ||  ||||||||||    
T  24069453 tttccgtctgtttttaaca 24069435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 385 - 471
Target Start/End: Original strand, 36938751 - 36938837
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaa 471  Q
    |||||| |||||||||| || |||||||| |||||||| ||||||||| ||||||||||||||||| ||| ||| || || ||||||    
T  36938751 ttggtctcataaatcttctgccgtttactattttggtcttctctgttaatttttaacatcaaatatctaaagtgaaccatatttaaa 36938837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 385 - 487
Target Start/End: Complemental strand, 41522734 - 41522632
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccat 484  Q
    ||||||| |||| |||| || ||||||||||||| ||||| || || | |||||||||||||||||||||| || || |||||||||| || |||| |||    
T  41522734 ttggtcctataagtcttctgccgtttactgttttagtcctttccgtcaatttttaacatcaaatatttaagatgaaccatgtttaaaagtggtccagcat 41522635  T
Q  485 aga 487  Q
    |||    
T  41522634 aga 41522632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 312 - 427
Target Start/End: Complemental strand, 4810243 - 4810128
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttt 410  Q
    ||||| |||||||||| |||||||||  ||||||||||||| | ||||||||| |||||||||| | |||||| ||  | ||||||||||| |||| |||    
T  4810243 gcttagtacatcatttcgtcccttaacttatttttggtttttaatttggtcct-taattataaaatgtctcaatttaattccataaatcttatgtcattt 4810145  T
Q  411 actgttttggtcctctc 427  Q
    ||| |||||||| ||||    
T  4810144 actattttggtcatctc 4810128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 44606163 - 44606315
Alignment:
Q  340 tatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagttttt 438  Q
    |||||||||||||||||||||||| |||| |||| ||| | |||| ||||||||||||||||| |   ||||| | ||||| |||||||  |||||||||    
T  44606163 tatttttggttttcactttggtcccctaactatatagtgtttcaatttggtcccataaatcttcttctgtttattattttgatcctctccattagttttt 44606262  T
Q  439 aacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    ||| | |||| | ||||||| || |  |||| |  || |||||||||||||||    
T  44606263 aaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagacctt 44606315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 485
Target Start/End: Complemental strand, 44103321 - 44103242
Alignment:
Q  406 cgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccata 485  Q
    ||||| || ||||||||||||| |||||||||||||||||||| | ||||||| || |||||||||  || |||||||||    
T  44103321 cgtttcctcttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 44103242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 311 - 440
Target Start/End: Original strand, 37980 - 38110
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||| |||||||||||||  ||||||| ||||| | ||| |||| |||| |||||||| | | || |||||| ||||| ||||    ||||    
T  37980 ggcttaatacatcgtttggtcccttaacttattttttgttttaattttagtcccctaactataaagtgtttgaatttggtctcataagtcttcctccgtt 38079  T
Q  410 tactgttttggtcctctctgttagtttttaa 440  Q
    |||| || |||||||||| ||||||||||||    
T  38080 tactattgtggtcctctccgttagtttttaa 38110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 7487506 - 7487444
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaa 375  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||||| ||| |||| ||||||    
T  7487506 cttaatacatcatttggtcctttaatttatttttcgttttcactttgatcccctaactataaa 7487444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 310 - 423
Target Start/End: Complemental strand, 35945559 - 35945445
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctca-attggtcccataaatcttttgtcgt 408  Q
    ||||||||||||| ||||||||||||||  ||||||| ||||||| ||| ||||  ||| |||||| | |||||  ||||||||||| ||||| ||  ||    
T  35945559 tggcttaatacattatttggtcccttaacttattttttgttttcattttagtcccttaactataaaatgtctcactttggtcccatatatcttctgcagt 35945460  T
Q  409 ttactgttttggtcc 423  Q
    ||||| |||||||||    
T  35945459 ttactattttggtcc 35945445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 356 - 440
Target Start/End: Original strand, 8095386 - 8095471
Alignment:
Q  356 tttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaa 440  Q
    ||||||||  ||| ||| |||| |||||||| |||||||| | |||||||||||||||| |||||||||| || ||||||||||||    
T  8095386 tttggtcccttaactattaagtgtctcaatttggtcccattactcttttgtcgtttactattttggtcctttccgttagtttttaa 8095471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 435
Target Start/End: Complemental strand, 36071499 - 36071374
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc-aattggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||| ||| |||||  ||| ||| ||||||| ||||||||  ||| |||| ||||| || |||||||||||||| |||| |  ||||    
T  36071499 ggcttaatacatcatttagtctcttaacttatattttgttttcaatttggtcccttaactatagagtatttcaaattggtcccataactcttctaccgtt 36071400  T
Q  410 tactgttttggtcctctctgttagtt 435  Q
    ||   |||||||| ||||||||||||    
T  36071399 tatcattttggtcatctctgttagtt 36071374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 309 - 386
Target Start/End: Complemental strand, 37474159 - 37474082
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||||||||||||  ||||||||  ||||| ||||||||| ||||||||  ||| |||||||| ||||||||    
T  37474159 ttggcttaatacatcatttcatcccttaacttatttatggttttcaatttggtcccttaactataaagtgtctcaatt 37474082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 422
Target Start/End: Complemental strand, 19915027 - 19914915
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaattggt-cccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||| ||||  |||||| |||||||| ||||||||  ||| |||||||| |||||||| || |||||||||||| |  ||||    
T  19915027 ggcttaatacatggtttggtcctttaacttattttgggttttcaatttggtcccttaactataaagtgtctcaatttgtacccataaatcttctaccgtt 19914928  T
Q  410 tactgttttggtc 422  Q
    |||  ||||||||    
T  19914927 taccattttggtc 19914915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 385 - 441
Target Start/End: Original strand, 31871465 - 31871521
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaac 441  Q
    |||||||||| |||||| ||||||||| | |||||||||| ||||||||||||||||    
T  31871465 ttggtcccatgaatcttctgtcgtttattattttggtcctttctgttagtttttaac 31871521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 596
Target Start/End: Original strand, 36756290 - 36756346
Alignment:
Q  541 gttggatcatgtagggtcta-ttgtattttattgtaaaccaccaacacctaatattt 596  Q
    |||||||||||||||||||| |||||||||| ||| |||||| ||||||||||||||    
T  36756290 gttggatcatgtagggtctaattgtattttactgtgaaccactaacacctaatattt 36756346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 422
Target Start/End: Original strand, 39515194 - 39515306
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||| |||  |||||||||||||  ||||||||||||||| |||| ||| || | |||||||| |||||| |||||| ||||| ||||||| | ||    
T  39515194 ggcttaatgcatgttttggtcccttaacttatttttggttttcattttgatcccctgactataaagtgtctcaatttggtctcataactcttttgccatt 39515293  T
Q  410 tactgttttggtc 422  Q
    |||  ||||||||    
T  39515294 tacctttttggtc 39515306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 314 - 432
Target Start/End: Original strand, 4807364 - 4807483
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    ||||||||||||| ||||| ||||  |||||||| |||| | |||||||| |||| ||||| || | |||| |||||||||||||||||  | ||||||     
T  4807364 ttaatacatcattcggtcctttaacttatttttgatttttaatttggtcccctaactataacgtttttcaatttggtcccataaatcttacgccgtttat 4807463  T
Q  413 tgttttggtcctctctgtta 432  Q
    | ||||||| ||||| ||||    
T  4807464 tattttggttctctccgtta 4807483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 7815038 - 7815113
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  ||| || ||||||  |||||||| |||||| |||||||||||||||||||| | ||||||||    
T  7815038 ggcttaatacatgctttagttccttaaattatttttgattttcattttggtcctctaattataaaatgtctcaatt 7815113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 2421339 - 2421233
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccat 484  Q
    ||||||||| ||||||| || |||||| | |||||||||||| |||||||||||||| | |||| | ||||||| || |  |||| | ||| |||| |||    
T  2421339 ttggtcccagaaatcttctgccgtttattattttggtcctctttgttagtttttaaccttaaatgtctaaggtgaaccaactttatagatggtccatcat 2421240  T
Q  485 agacctt 491  Q
    |||||||    
T  2421239 agacctt 2421233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 21267233 - 21267275
Alignment:
Q  416 tttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  21267233 tttggtcctctccgttagtttttaacatcaaatatctaaggtg 21267275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 485
Target Start/End: Original strand, 21670164 - 21670234
Alignment:
Q  415 ttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccata 485  Q
    |||||||| |||| |||||||||||||||||||||| ||||||| || || || |||| || |||||||||    
T  21670164 ttttggtcttctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccata 21670234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 384
Target Start/End: Original strand, 39544924 - 39544998
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa 384  Q
    ||||||||||||||||||||||||||||  ||||||  ||||||||| |||||   ||| |||||||| ||||||    
T  39544924 tggcttaatacatcatttggtcccttaacttattttctgttttcactctggtcgcttaactataaagtgtctcaa 39544998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 3237761 - 3237704
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    |||||||||||||||||||||||||||  ||||||||| ||||| ||| |||| ||||    
T  3237761 ggcttaatacatcatttggtcccttaacttatttttggatttcattttagtcccctaa 3237704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 11081153 - 11081096
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    |||||||||||||||||| ||||||||  ||||||  ||||||| |||||||||||||    
T  11081153 ggcttaatacatcatttgatcccttaacttattttctgttttcaatttggtcctctaa 11081096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 310 - 386
Target Start/End: Original strand, 8502077 - 8502153
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||||||  |||||||||||||| ||||||||  ||||| |||| |||||||| | |||| | ||||||||    
T  8502077 tggcttaatacatgctttggtcccttaatttatttttgaatttcaatttgctcctctaactttaaactgtctcaatt 8502153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 491
Target Start/End: Original strand, 13513520 - 13513596
Alignment:
Q  415 ttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    ||||||||||||| ||||| |||||||||||||| | |||| || || || ||||||| || ||||||||| |||||    
T  13513520 ttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatatacctt 13513596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 491
Target Start/End: Original strand, 13603053 - 13603129
Alignment:
Q  415 ttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    ||||||||||||| ||||| |||||||||||||| | |||| || || || ||||||| || ||||||||| |||||    
T  13603053 ttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatatacctt 13603129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 39325850 - 39325794
Alignment:
Q  415 ttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaa 471  Q
    |||| ||| |||||| |||||||||||||||||| | ||||||| ||||||||||||    
T  39325850 ttttagtcatctctgctagtttttaacatcaaatgtctaaggtgaactatgtttaaa 39325794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 592
Target Start/End: Complemental strand, 39546571 - 39546516
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaat 592  Q
    |||||||||||||||| || ||||||||||||||  || |||||| ||||||||||    
T  39546571 gattgttggatcatgtgggatctattgtattttaccgtgaaccacaaacacctaat 39546516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 396
Target Start/End: Original strand, 21551917 - 21552003
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataa 396  Q
    ||||||||||||  |||||||||||||  ||||||||  ||||| ||||||||  ||| | |||| |||||||| ||||||||||||    
T  21551917 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactatctcaatttggtcccataa 21552003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 396
Target Start/End: Original strand, 21552963 - 21553049
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataa 396  Q
    ||||||||||||  |||||||||||||  ||||||||  ||||| ||||||||  ||| | |||| |||||||| ||||||||||||    
T  21552963 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactatctcaatttggtcccataa 21553049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 396
Target Start/End: Original strand, 40102216 - 40102302
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataa 396  Q
    ||||||||||||  |||||||||||||  ||||||||  ||||| ||||||||| ||| | ||||  ||||||| ||||||||||||    
T  40102216 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcctttaactttaaaccatctcaatttggtcccataa 40102302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 363
Target Start/End: Original strand, 7561793 - 7561846
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcc 363  Q
    |||||||||||||  |||||||||||||  ||||||||| ||||| ||||||||    
T  7561793 tggcttaatacatgctttggtcccttaacttatttttggatttcaatttggtcc 7561846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 1570327 - 1570203
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||| ||||  |||||||  |||||| |||||||   ||| |||||||| |||||| ||||||   ||||| || || ||||    
T  1570327 ggcttaatacattgtttggtcctttaacttatttttcattttcaatttggtctcataactataaagtgtctcaatttggtctattaaattttatgccgtt 1570228  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    |||| |||||||| |||| ||||||    
T  1570227 tactattttggtcatctccgttagt 1570203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 412
Target Start/End: Original strand, 3237427 - 3237514
Alignment:
Q  325 tttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    |||||||||||||  ||||||||| ||||| |||||||| |||| | |||| | |||||| |||||||||||||| || || |||||||    
T  3237427 tttggtcccttaacttatttttggatttca-tttggtcccctaactttaaactgtctcaatttggtcccataaatattctgccgtttac 3237514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 7795761 - 7795825
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaa 375  Q
    ||||||||| ||  ||| || ||||||  |||||||| |||||| ||||||||||||||||||||    
T  7795761 ggcttaatatatgctttagttccttaaattatttttgattttcattttggtcctctaattataaa 7795825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 8395019 - 8395071
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcc 363  Q
    ||||||||| ||||||||||| |||||  ||||||||||||| | ||||||||    
T  8395019 ggcttaatatatcatttggtctcttaacttatttttggtttttattttggtcc 8395071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 441
Target Start/End: Original strand, 8395065 - 8395121
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaac 441  Q
    |||||||||||| |||| |  |||||||  ||||||||||||| |||||||||||||    
T  8395065 ttggtcccataattcttcttccgtttaccattttggtcctctccgttagtttttaac 8395121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 36734665 - 36734577
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaat 398  Q
    |||||| ||||||||| | ||||||||  |||||||  ||||||||||||||  || | ||||| || |||||| ||||||||||||||    
T  36734665 ggcttattacatcattggatcccttaacttatttttcattttcactttggtcgcctgactataatgtgtctcaatttggtcccataaat 36734577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 37324806 - 37324734
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||| ||||||  ||||||||  ||||||||||||| | |||||||| |||| |||||| | ||||||||    
T  37324806 ttaatacgtcatttaatcccttaacttatttttggtttttaatttggtcccctaactataaaatgtctcaatt 37324734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 593
Target Start/End: Complemental strand, 44103184 - 44103132
Alignment:
Q  541 gttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaata 593  Q
    |||| ||||||| |||||||||||| |||||||| ||||||  ||||||||||    
T  44103184 gttgaatcatgtggggtctattgtactttattgtgaaccactcacacctaata 44103132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 9e-44; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 310 - 491
Target Start/End: Complemental strand, 47668719 - 47668537
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    ||||||||||||||||||||||| ||||  ||||||  |||||||||||||||| |||| |||||||| |||||| |||||||| || ||| | || |||    
T  47668719 tggcttaatacatcatttggtcctttaacttattttctgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatcatctgccgt 47668620  T
Q  409 ttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||  || ||| ||||| ||| |||||||||||||||    
T  47668619 ttattgttttggtcctctctgttagtttttaacatcaaatatctaaggtaaaccatggttaaagatggtccaccatagacctt 47668537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 311 - 471
Target Start/End: Original strand, 86798 - 86959
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||| ||| |||||| ||||||| |||||||||||||| | |||| ||||||| ||||||||| |||||||||||| || || ||||    
T  86798 ggcttaatacatcatttagtctcttaatttatttttagttttcactttggttccctaactataaagcatctcaatttggtcccataaatattctgccgtt 86897  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaa 471  Q
    ||||||||||||| |||| |||||||||||||||||||| | ||||||| || |||||||||    
T  86898 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaa 86959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 317 - 488
Target Start/End: Original strand, 35787797 - 35787969
Alignment:
Q  317 atacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgt 415  Q
    |||||| |||||||| | |||  ||||||||||||||||||||||||||||| |||||| | | |||||| ||||||||||||||| |||||||||| ||    
T  35787797 atacattatttggtctcataacttatttttggttttcactttggtcctctaactataaaatgtttcaatttggtcccataaatcttctgtcgtttaccgt 35787896  T
Q  416 tttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagac 488  Q
    |||||||||||| |||||||||||||||||||| | ||||||  |  |||||||||  || ||||||||||||    
T  35787897 tttggtcctctccgttagtttttaacatcaaatgtctaaggtaaatcatgtttaaaggtggtccaccatagac 35787969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 311 - 491
Target Start/End: Complemental strand, 6616332 - 6616151
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc-aattggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||  |||||||||||||||| |||| |||||||| |||| |||||||||| || || || |||||||    
T  6616332 ggcttaatacatcatttggtcccttaacttattttccgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatattctgtcgtt 6616233  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    || |||||||||||||||  ||||||||||||||||||| |  |||||| || ||| ||||| ||  ||||| |||||||||    
T  6616232 tattgttttggtcctctcctttagtttttaacatcaaatgtcaaaggtgaacaatgattaaagatagtccactatagacctt 6616151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 309 - 441
Target Start/End: Complemental strand, 11115103 - 11114970
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    |||||||||||||||||||||||||||||  ||||||  ||||||| |||||||| |||| ||||||||||||||| |||||||||||| |||| |||||    
T  11115103 ttggcttaatacatcatttggtcccttaacttattttcagttttcattttggtcccctaactataaagtatctcaatttggtcccataactcttctgtcg 11115004  T
Q  408 tttactgttttggtcctctctgttagtttttaac 441  Q
    |||||  |||||| |||||| |||||||||||||    
T  11115003 tttaccattttggacctctccgttagtttttaac 11114970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 33377485 - 33377361
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  |||||||| |||||| |||||||| |||| |||||||| |||||| ||||||||||||||||| || ||||    
T  33377485 ggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtt 33377386  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    |||| ||||||||||||| ||||||    
T  33377385 tactattttggtcctctccgttagt 33377361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 311 - 491
Target Start/End: Original strand, 11094521 - 11094700
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtt 409  Q
    ||||||||||| ||| |||||| ||||| ||||||||||||| |||||||||  |||| |||||||| ||| |||| ||||| |||||| || || ||||    
T  11094521 ggcttaatacaccatctggtcctttaatttatttttggtttttactttggtctcctaactataaagtgtcttaatttggtcctataaattttctgccgtt 11094620  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    |||||||||||||||||  |||||||||||||||||||| | ||||  |||| |||||||||  || | |||||||||||||    
T  11094621 tactgttttggtcctcttcgttagtttttaacatcaaatgtctaag--gtaccatgtttaaatgtggttcaccatagacctt 11094700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 33376213 - 33376341
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| ||| || | ||||||||||||| |||||| ||||||||||||||||| |||||||    
T  33376213 ggcttaatacatcatttggtctcttaacttatttttggttttcaatttagtgccctaattataaagtgtctcaatttggtcccataaatcttctgtcgtt 33376312  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||| |||| |||||||| |||| |||||    
T  33376313 tactattttagtcctctccgttaattttt 33376341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 311 - 432
Target Start/End: Complemental strand, 37560420 - 37560298
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||||| |||| |||||||| |||||| |||||||||||||||||  | ||||    
T  37560420 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttacgacgtt 37560321  T
Q  410 tactgttttggtcctctctgtta 432  Q
    |||| | ||||||||||| ||||    
T  37560320 tactatcttggtcctctccgtta 37560298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 311 - 471
Target Start/End: Complemental strand, 39592410 - 39592249
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||| |||||||||||||||||  ||||||  ||||||||||| |||| |||| |||||||| |||||| |||||||  ||  |||| |||||||    
T  39592410 ggcttaatatatcatttggtcccttaacttattttatgttttcactttagtcccctaactataaagtgtctcaaattggtccattatgtcttctgtcgtt 39592311  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaa 471  Q
    |||||||||||| ||||| |||| ||||||||||||||| | |||||||  | |||||||||    
T  39592310 tactgttttggttctctccgttaatttttaacatcaaatgtctaaggtgagccatgtttaaa 39592249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 15446791 - 15446663
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  ||||||||| ||||| ||||||| |||||||||||||| | |||| |||||||||||||| || |  ||||    
T  15446791 ggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcatctaattataaagtgtttcaatttggtcccataaattttctaccgtt 15446692  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||| ||||||||||||| ||||||||||    
T  15446691 tactattttggtcctctccgttagttttt 15446663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 39590936 - 39591064
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaat-tggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||| |||| |||||||| ||||||  ||||||| ||   | | |||||||    
T  39590936 ggcttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaaactggtcccttatgccatctgtcgtt 39591035  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    ||||||||| |||||| | ||||||||||    
T  39591036 tactgttttagtcctcgcagttagttttt 39591064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 309 - 455
Target Start/End: Complemental strand, 30683150 - 30683003
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    |||| |||||||||  |||||||||||||| |||||||| |||||| ||||||||  ||| |||||||| |||||| |||||||||||||||||  | ||    
T  30683150 ttggtttaatacatgctttggtcccttaatttatttttgattttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttcggccg 30683051  T
Q  408 tttactgttttggtcctctctgttagtttttaacatcaaatatttaag 455  Q
    || | | |||||||| |||| ||||||||||||||  |||||||||||    
T  30683050 ttaattcttttggtcttctccgttagtttttaacaataaatatttaag 30683003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 314 - 434
Target Start/End: Complemental strand, 1273550 - 1273430
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttac 412  Q
    |||||| |||||||||||||||||  ||||||||||||| | |||||||| |||| |||||||| |||||||| |||||||||| |||| |||||||| |    
T  1273550 ttaatatatcatttggtcccttaacttatttttggttttaa-tttggtcccctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttgc 1273452  T
Q  413 tgttttggtcctctctgttagt 434  Q
    | ||||||||||||| ||||||    
T  1273451 tattttggtcctctccgttagt 1273430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 31711087 - 31711215
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||||| ||||| ||||||||| ||| |||||||| |||||| |||||| ||||| |||| |||||||    
T  31711087 ggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggtctcataagtcttatgtcgtt 31711186  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||  ||||| |||| || ||| ||||||    
T  31711187 taccattttgatcctttccgtttgttttt 31711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 46796147 - 46796019
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||| |||||||||||||  ||||||||||||| | |||||||| |||| |||||||| |||||| |||||||||||| ||||    ||||    
T  46796147 ggcttaatacatcgtttggtcccttaacttatttttggttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtt 46796048  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||| || |||||||||| ||||||||||    
T  46796047 tactattgtggtcctctccgttagttttt 46796019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 537 - 596
Target Start/End: Original strand, 11094746 - 11094805
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11094746 gattgttggatcatgtaaggtctattgtattttattgtaaaccaccaacacctaatattt 11094805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 29833367 - 29833493
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| |||||||| ||||||||||| | |||||| |||||||| || |||||||||||||    
T  29833367 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaattataaaatgtctcaatttggtcccttatatcttttgtcgtt 29833466  T
Q  410 tactgttttggtcctctctgttagttt 436  Q
      || ||||||||||||| ||||||||    
T  29833467 acctcttttggtcctctccgttagttt 29833493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 310 - 438
Target Start/End: Original strand, 29686250 - 29686379
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc-aattggtcccataaatcttttgtcgt 408  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||||||  ||| |||||| | |||| |||||||||| ||  |||| ||||||    
T  29686250 tggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaattgtctcaaattggtcccttatgtcttatgtcgt 29686349  T
Q  409 ttactgttttggtcctctctgttagttttt 438  Q
    |  || ||||||||||||| |||| |||||    
T  29686350 tacctcttttggtcctctccgttaattttt 29686379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 303 - 438
Target Start/End: Complemental strand, 28103615 - 28103479
Alignment:
Q  303 ttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatctt 401  Q
    |||| |||||||||| |||||||||||||||||||  ||||||||| ||||| ||||||||  ||| |||||||| |||||| ||||||||||||  |||    
T  28103615 ttatttttggcttaacacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataagactt 28103516  T
Q  402 ttgtcgtttactgttttggtcctctctgttagttttt 438  Q
     || |||||||  |||||||||| || ||| ||||||    
T  28103515 ctgccgtttaccattttggtcctttccgtttgttttt 28103479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 37558993 - 37559117
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||| ||||||  ||||||||||||||| |||||||| |||| |||||| | |||||| ||||||||||||| |||    ||||    
T  37558993 ggcttaatacatcatttggttccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaaccttacaccgtt 37559092  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    |||| |||||||| |||| ||||||    
T  37559093 tactattttggtcatctccgttagt 37559117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 310 - 441
Target Start/End: Original strand, 38370276 - 38370408
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    |||||||||||||| |||||||||||||  |||||||  |||||| ||||||| |||||  ||||||| | |||| |||||| ||||| |||| ||||||    
T  38370276 tggcttaatacatcgtttggtcccttaacttatttttcattttcaatttggtcatctaacgataaagtgtatcaatttggtctcataactcttctgtcgt 38370375  T
Q  409 ttactgttttggtcctctctgttagtttttaac 441  Q
    ||||  |||||||| |||| |||||||||||||    
T  38370376 ttaccattttggtcatctccgttagtttttaac 38370408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 315 - 438
Target Start/End: Complemental strand, 40146740 - 40146616
Alignment:
Q  315 taatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttact 413  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||||||| ||| |||||||| |||||| |||||||||||| |||| |  || |||||    
T  40146740 taatacatcatttggtcccttaacgtatttttggtttttattttggtcctttaactataaagtgtctcaatttggtcccataagtcttcttccgattact 40146641  T
Q  414 gttttggtcctctctgttagttttt 438  Q
      | ||||| |||| ||||||||||    
T  40146640 aatgtggtcatctccgttagttttt 40146616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 340 - 434
Target Start/End: Original strand, 26788546 - 26788641
Alignment:
Q  340 tatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagt 434  Q
    ||||||| ||||||||||||||||| ||| |||||| |||||||| || |||||||||||||| || |||||||| ||||||||||||| ||||||    
T  26788546 tatttttagttttcactttggtcctataagtataaaatatctcaatttcgtcccataaatcttctgccgtttactattttggtcctctccgttagt 26788641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 312 - 422
Target Start/End: Original strand, 27408759 - 27408870
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttt 410  Q
    ||||||||||||||||||||||||||  ||||||  ||||||| ||||||| ||||| |||||||| |||||| ||||||||||||||||| |  |||||    
T  27408759 gcttaatacatcatttggtcccttaacttattttcagttttcaatttggtcatctaactataaagtgtctcaatttggtcccataaatcttcttccgttt 27408858  T
Q  411 actgttttggtc 422  Q
    ||  ||||||||    
T  27408859 accattttggtc 27408870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 537 - 596
Target Start/End: Original strand, 52980206 - 52980265
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  52980206 gattgttggattatgtagagtctattgtattttattgtaaaccaccaacacctaatattt 52980265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 534 - 596
Target Start/End: Original strand, 35788015 - 35788077
Alignment:
Q  534 gatgattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||    
T  35788015 gatgattgttggatcatgcagggtctattgcattttattgtaaatcaccaacacctaatattt 35788077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 15787623 - 15787506
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtt 409  Q
    ||||||||| |||||||  | ||||||| ||||||| ||||||| |||||||| |||| |||||||| |||||||| |||||||||| | ||||| ||||    
T  15787623 ggcttaatatatcatttttttccttaatttattttttgttttcattttggtcccctaactataaagtgtctcaatttggtcccataacttttttgccgtt 15787524  T
Q  410 tactgttttggtcctctc 427  Q
    |||  |||||||||||||    
T  15787523 taccattttggtcctctc 15787506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 44128455 - 44128331
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||| |||||||| ||||  |||||||  |||||| |||||||| |||| |||||||| |||||| || ||||  |||||||| || ||||    
T  44128455 ggcttaatacatcgtttggtcctttaacttatttttcattttcaatttggtcccctaactataaagtgtctcaatttagtcctttaaatcttatgccgtt 44128356  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    |||| ||||||||||||| ||||||    
T  44128355 tactattttggtcctctccgttagt 44128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 370 - 448
Target Start/End: Original strand, 34438460 - 34438539
Alignment:
Q  370 tataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaat 448  Q
    |||||||| |||||||| ||||||||||||||| || |||||||| ||||||| ||||||||||||||||||| ||||||    
T  34438460 tataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctctgttagtttttaacctcaaat 34438539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 537 - 596
Target Start/End: Complemental strand, 39592183 - 39592125
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  39592183 gattgttggatcatgtagg-tctattatattttattgtaaaccaccaacacctaatattt 39592125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 343 - 458
Target Start/End: Complemental strand, 41401792 - 41401677
Alignment:
Q  343 ttttggttttcactttggtcctctaattataaagtatctcaattggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaaca 442  Q
    |||||||||| ||||||||||  | | |||||| ||| |||||||||| ||||||| |||| |||||||| |||||| |||||||  ||| |||||||||    
T  41401792 ttttggtttttactttggtcccttgactataaaatatttcaattggtctcataaatattttttcgtttaccgttttgatcctctccattaatttttaaca 41401693  T
Q  443 tcaaatatttaaggtg 458  Q
    |||||| | |||||||    
T  41401692 tcaaatgtctaaggtg 41401677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 309 - 438
Target Start/End: Complemental strand, 96804 - 96674
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatc-tcaattggtcccataaatcttttgtcg 407  Q
    ||||||||||||||  |||||||||||||  ||||||  |||||||||||||||| |||| |||||||| || | |||||||||| ||  ||||||||||    
T  96804 ttggcttaatacattgtttggtcccttaacttattttatgttttcactttggtcccctaactataaagtgtcttaaattggtcccttatgtcttttgtcg 96705  T
Q  408 tttactgttttggtcctctctgttagttttt 438  Q
    ||   | ||||||||||| | ||||||||||    
T  96704 ttatatattttggtcctcgcagttagttttt 96674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 434
Target Start/End: Complemental strand, 55953971 - 55953849
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgttta 411  Q
    ||||||| |||||||| ||||||||  |||||||| |||||| ||||||||  ||| |||||| | |||||||| |||||| |||||||| || ||||||    
T  55953971 cttaatatatcatttgatcccttaacttatttttgattttcaatttggtcccataactataaaatgtctcaatttggtcccgtaaatcttatgccgttta 55953872  T
Q  412 ctgttttggtcctctctgttagt 434  Q
    || ||||||||||| | ||||||    
T  55953871 ctattttggtcctccccgttagt 55953849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 342 - 434
Target Start/End: Complemental strand, 5688727 - 5688634
Alignment:
Q  342 tttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcctctctgttagt 434  Q
    ||||| ||||||| |||||||| |||| |||||||| |||||||| ||| ||||||||||| ||||||||||| |||||||| |||| ||||||    
T  5688727 tttttagttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttatgtcgtttactattttggtcatctccgttagt 5688634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 311 - 439
Target Start/End: Original strand, 11113737 - 11113866
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||||||| |||||  |||||| |||||||| ||| ||||  ||| |||||||| |||||| |||||| ||||| |||| || ||||    
T  11113737 ggcttaatacatcatttggtcacttaacttattttcggttttcattttagtcccttaactataaagtgtctcaatttggtctcataactcttctgccgtt 11113836  T
Q  410 tactgttttggtcctctctgttagttttta 439  Q
    |||  |||||||| | || |||||||||||    
T  11113837 taccattttggtcatttccgttagttttta 11113866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 309 - 481
Target Start/End: Original strand, 43894098 - 43894271
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    ||||||||||||||||| | |||||||||  ||||||||||||||| |||||||| |||| |||||| | |||||| |||||| ||||| | ||||   |    
T  43894098 ttggcttaatacatcatatagtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcacataactatttttctg 43894197  T
Q  408 tttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccac 481  Q
    ||  || |||||||| | || ||| |||||||||||||||| | | ||||| || || |||||| ||| |||||    
T  43894198 ttacctcttttggtcatatccgttggtttttaacatcaaatgtctgaggtgaaccatatttaaagatggtccac 43894271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 44126590 - 44126717
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc---aattggtcccataaatcttttgtc 406  Q
    |||||||||||||  |||||||||||||  |||||||  |||||| ||||||| ||||| |||||||  ||||   | |||||||| |||||||| || |    
T  44126590 tggcttaatacattgtttggtcccttaacttatttttcattttcaatttggtcttctaactataaagagtctcacaatttggtcccttaaatcttatgcc 44126689  T
Q  407 gtttactgttttggtcctctctgttagt 434  Q
    ||||||| |||||||| |||||||||||    
T  44126690 gtttactattttggtcttctctgttagt 44126717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 310 - 386
Target Start/End: Original strand, 15445430 - 15445506
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||||||  |||||||||||||  ||||||||| ||||| |||||||| ||||||||||||| ||||||||    
T  15445430 tggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctcaatt 15445506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 53400180 - 53400308
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  ||||| |||||||  ||||||| | ||||| ||||||||  ||| |||||||| |||||| ||||||| ||||||||| |||||||    
T  53400180 ggcttaatacatgctttggccccttaacttatttttagatttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtt 53400279  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||  |||| |||||||| ||||| ||||    
T  53400280 taccattttagtcctctccgttagatttt 53400308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 313 - 423
Target Start/End: Original strand, 10403277 - 10403387
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttta 411  Q
    ||||||||||||||| |||||| | | ||||||||||||| |||||||||| |||| |||||||| ||| || |||||| | ||||||||  ||||||||    
T  10403277 cttaatacatcatttagtccctaact-tatttttggtttttactttggtcccctaactataaagtgtcttaatttggtctcgtaaatcttacgtcgttta 10403375  T
Q  412 ctgttttggtcc 423  Q
    || |||||||||    
T  10403376 ctattttggtcc 10403387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 311 - 432
Target Start/End: Complemental strand, 10403537 - 10403416
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||| ||| |||||  |||||||||||||||||||| |  ||||| |||||||| | |||| |||||| ||||||||||  ||||||    
T  10403537 ggcttaatacatcatttagtctcttaacttatttttggttttcactttgat-ttctaactataaagtgtatcaatttggtctcataaatcttcagtcgtt 10403439  T
Q  410 tactgttttggtcctctctgtta 432  Q
    || | ||| ||||||||| ||||    
T  10403438 tattatttcggtcctctcggtta 10403416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 302 - 458
Target Start/End: Original strand, 15786938 - 15787095
Alignment:
Q  302 tttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatct 400  Q
    ||||| || |||||||||||||||||||||| ||||  ||||||| ||||||| |||| ||| |||| |||||| | |||||| |||||||||||| | |    
T  15786938 tttattttaggcttaatacatcatttggtccattaacttattttttgttttcattttgttcccctaactataaactgtctcaatttggtcccataacttt 15787037  T
Q  401 tttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    | || ||||||   || || ||||||| |||| |||||||| | |||| | |||||||    
T  15787038 tctgccgtttatcattatgatcctctccgttaatttttaaccttaaatgtctaaggtg 15787095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 308 - 412
Target Start/End: Complemental strand, 26393251 - 26393146
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    ||||| ||||||||| ||||||||||||||  |||||||  |||| | |||| |||| ||| |||||||| |||||| |||||||||||| |||| ||||    
T  26393251 tttggtttaatacatgatttggtcccttaacttattttttatttttattttgatcctttaactataaagtgtctcaatttggtcccataactcttctgtc 26393152  T
Q  407 gtttac 412  Q
    ||||||    
T  26393151 gtttac 26393146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 311 - 448
Target Start/End: Complemental strand, 29688095 - 29687961
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatc-tcaattggtcccataaatcttttgtcgtt 409  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||||| |    |||||||| || | || |  |||| ||  ||||||||||||    
T  29688095 ggcttaatacattatttggtcccttaacttatttttggttttcactttggtcccc----tataaagtgtcttaaactcatcccttatgtcttttgtcgtt 29688000  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaat 448  Q
      || |||||||| ||||  |||||||||||||||||||    
T  29687999 acctcttttggtcatctcctttagtttttaacatcaaat 29687961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 38553927 - 38553999
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||||||||||||||| ||||||  ||||| | ||||||| ||||| |||||||| ||||||||    
T  38553927 ttaatacatcatttggtcccttaatttattttctgtttttattttggtcttctaactataaagtgtctcaatt 38553999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 937219 - 937144
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||||||||||||| |||||| || ||||| |||||||| |||| |||||||| ||||||||    
T  937219 ggcttaatacatgctttggtcccttaatttattttcggatttcattttggtcccctaactataaagtgtctcaatt 937144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 27410805 - 27410687
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaattggtcccataaatcttttgtcg 407  Q
    |||||||||||||||||||||||| |||||  || |||| ||||||| |||  ||| |||| |||||||| |||||||| |  ||||||||||| |  ||    
T  27410805 tttggcttaatacatcatttggtctcttaacttaattttagttttcaatttaatcc-ctaactataaagtgtctcaatttggtccataaatcttcttccg 27410707  T
Q  408 tttactgttttggtcctctc 427  Q
    |||||  |||||||||||||    
T  27410706 tttaccattttggtcctctc 27410687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 368
Target Start/End: Original strand, 54372739 - 54372798
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    |||||||||||||||||||||||||||||  ||||||  ||||||| |||||||||||||    
T  54372739 ttggcttaatacatcatttggtcccttaacttattttccgttttcaatttggtcctctaa 54372798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 311 - 412
Target Start/End: Original strand, 29663638 - 29663739
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||| |||  ||||||||| ||||||||||||||| |||| ||| |||| |||||| | |||||| |||||||||||| |||| || ||||    
T  29663638 ggcttaatacatcctttaatcccttaatttatttttggttttcattttgatcc-ctaactataaattgtctcaatttggtcccataactcttctgccgtt 29663736  T
Q  410 tac 412  Q
    |||    
T  29663737 tac 29663739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 592
Target Start/End: Complemental strand, 29687871 - 29687817
Alignment:
Q  538 attgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaat 592  Q
    |||||||||||||||| |||||||||||||||||||| |||||| | ||||||||    
T  29687871 attgttggatcatgtaaggtctattgtattttattgtgaaccactaccacctaat 29687817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 35789711 - 35789645
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagt 377  Q
    ||||||||||||||||| ||| |||||  ||||||||||||||||||||||||  ||| ||||||||    
T  35789711 ggcttaatacatcatttagtctcttaacttatttttggttttcactttggtcccgtaactataaagt 35789645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 308 - 392
Target Start/End: Complemental strand, 526843 - 526758
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtccc 392  Q
    ||||| |||||||||  |||||||||||||| |||||| || ||||| |||||||| |||| |||||||| |||||| ||||||||    
T  526843 tttggtttaatacatgttttggtcccttaatttattttcggatttcattttggtcccctaactataaagtgtctcaacttggtccc 526758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 408
Target Start/End: Original strand, 30682716 - 30682813
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    ||||||||||| ||||||||||||||  ||||||| ||||||| ||||||||  ||| |||||||| ||| || ||||||  ||||||||| ||||||    
T  30682716 gcttaatacataatttggtcccttaacttatttttagttttcattttggtcccttaactataaagtgtcttaatttggtcttataaatcttctgtcgt 30682813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 325 - 489
Target Start/End: Original strand, 44302729 - 44302894
Alignment:
Q  325 tttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaattgg-tcccataaatcttttgtcgtttactgttttggtcc 423  Q
    |||||||||||||   |||||||  |||||  |||||| ||||| |||||||| |||||||| | |||||||||| || || | ||  || |||||||||    
T  44302729 tttggtcccttaactaatttttgaatttcatattggtcatctaactataaagtgtctcaatttgatcccataaattttctgccattacctcttttggtcc 44302828  T
Q  424 tctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacc 489  Q
    |||| ||||||||||||||| |||    ||||||| ||||| ||||||  || | |||||||||||    
T  44302829 tctccgttagtttttaacattaaaagactaaggtgaactatatttaaaggtggttcaccatagacc 44302894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 3217730 - 3217606
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||| ||||||||  ||||||||  ||||||||||||||| ||| | |||||| | | || ||| || |||||||||| ||| |||    
T  3217730 ggcttaatacattctttgatcccttaacttatttttgaatttcactttggtcctttaactttaaagtgttttaatttgatctcataaatcttctgttgtt 3217631  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    |||| |||||||||| || ||||||    
T  3217630 tactattttggtcctatccgttagt 3217606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 432
Target Start/End: Original strand, 5687216 - 5687292
Alignment:
Q  357 ttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcctctctgtta 432  Q
    |||||||  ||| |||||||| |||||||| |||||||||||||||||| |||||||| |||||||| |||| ||||    
T  5687216 ttggtcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcatctccgtta 5687292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 412
Target Start/End: Original strand, 52658904 - 52659008
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    ||||||||||||||  |||||||||||||  |||||||  ||||||||||||||| |||| |||||| | | |||| ||||| | ||||||||| || ||    
T  52658904 ttggcttaatacatgttttggtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggttctataaatcttctgccg 52659003  T
Q  408 tttac 412  Q
    |||||    
T  52659004 tttac 52659008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 314 - 441
Target Start/End: Complemental strand, 52660332 - 52660204
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttac 412  Q
    ||||||||| ||||| | | ||||| |||||||  |||| | |||||||  |||| |||||||||||| |||| ||||||||||||||| || |||||||    
T  52660332 ttaatacatgatttgattctttaatttattttttatttttattttggtctcctaactataaagtatcttaattcggtcccataaatcttctgccgtttac 52660233  T
Q  413 tgttttggtcctctctgttagtttttaac 441  Q
      ||||| || | |||||| |||||||||    
T  52660232 cattttgatcatttctgtttgtttttaac 52660204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 12396995 - 12396920
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| |||||||| ||||||||    
T  12396995 ggcttaatacatgttttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 12396920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 310 - 436
Target Start/End: Complemental strand, 29834554 - 29834427
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    |||||||||||||  |||||||||||||  |||||| || ||||| |||| ||| |||| ||||| ||||||||| ||| |||| ||  |||| || |||    
T  29834554 tggcttaatacatgctttggtcccttaacttattttcggatttcattttgatcccctaactataatgtatctcaatttgatcccttatgtcttctgccgt 29834455  T
Q  409 ttactgttttggtcctctctgttagttt 436  Q
    |  || |||||||| |||||||||||||    
T  29834454 tacctcttttggtcatctctgttagttt 29834427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 312 - 458
Target Start/End: Complemental strand, 48207837 - 48207690
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttt 410  Q
    |||||||| ||  |||||||| ||||  ||||||| ||||||| |||||||  ||||||||||||| |||||| ||||||  |||| |||| |  |||||    
T  48207837 gcttaatatatgctttggtcctttaacttattttttgttttcattttggtctcctaattataaagtgtctcaatttggtcatataactcttctaccgttt 48207738  T
Q  411 actgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    ||  || |||||| |||||||| |||||||| | |||| | |||||||    
T  48207737 acaattgtggtcccctctgttattttttaaccttaaatgtctaaggtg 48207690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 406
Target Start/End: Complemental strand, 19049979 - 19049897
Alignment:
Q  325 tttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    |||||||||||||  ||||||||| ||||| |||| ||| ||||||||||||| |||||| |||||||| ||  |||||||||    
T  19049979 tttggtcccttaacttatttttggatttcattttgatcccctaattataaagtgtctcaatttggtcccttatgtcttttgtc 19049897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 398
Target Start/End: Complemental strand, 28370764 - 28370674
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaat 398  Q
    |||| |||||||||  |||||||||||||  ||||||||| ||||| ||||||||||||| | |||| | |||||| |||||||| |||||    
T  28370764 ttggtttaatacatgctttggtcccttaacttatttttggatttcaatttggtcctctaactttaaactgtctcaatttggtcccctaaat 28370674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 30672185 - 30672060
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| ||||||||  ||| | |||||| |||||| |||||||| ||  |||| || ||||    
T  30672185 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccgtaactttaaagtgtctcaatttggtcccttatgtcttctgccgtt 30672086  T
Q  410 tactgttttggtcctctctgttagttt 436  Q
      |||||||||||||||| ||||||||    
T  30672085 acctgttttggtcctctc-gttagttt 30672060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 47668498 - 47668440
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatatt 595  Q
    ||||||| |||||||||||||||||||||||||| ||| |||||| ||||  |||||||    
T  47668498 gattgttcgatcatgtagggtctattgtattttagtgtgaaccactaacatttaatatt 47668440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 386
Target Start/End: Complemental strand, 56001392 - 56001314
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||||||||  |||||||||||||  |||||||  |||||| ||||| || |||| |||||||| ||||||||    
T  56001392 tttggcttaatacatgctttggtcccttaacttattttttattttcattttggccccctaactataaagtgtctcaatt 56001314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 6140406 - 6140333
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    ||||| |||||| |||| ||||||||||| |||||||| | || ||||||||||||| | |||||| |||||||    
T  6140406 ttggttccataactcttctgtcgtttactattttggtcatttccgttagtttttaaccttaaatatctaaggtg 6140333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 434
Target Start/End: Original strand, 38417623 - 38417672
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagt 434  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||| ||||||    
T  38417623 ttggtcccataaatcttatgtcgtttactatttcggtcctctccgttagt 38417672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 425
Target Start/End: Original strand, 55952831 - 55952935
Alignment:
Q  321 atcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttg 419  Q
    |||||||||||| ||||| |||||||| |||| | ||| |||| |||| |||||||| | |||||| |||| ||||| |||| ||||||||| | |||||    
T  55952831 atcatttggtcc-ttaatttatttttgatttttaatttagtcccctaactataaagtgtttcaatttggtctcataactcttatgtcgtttattattttg 55952929  T
Q  420 gtcctc 425  Q
    ||||||    
T  55952930 gtcctc 55952935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 19048899 - 19048951
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcc 363  Q
    ||||||||||||  |||||||||||||| ||||||||| ||||| ||||||||    
T  19048899 ggcttaatacatgctttggtcccttaatttatttttggatttcaatttggtcc 19048951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 34439706 - 34439654
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttt 437  Q
    ||||||||||||||||| || |||||||| |||||||| |||| |||||||||    
T  34439706 ttggtcccataaatcttctgccgtttactattttggtcatctccgttagtttt 34439654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 52981271 - 52981143
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaat-tggtcccataaatcttttgtcgtt 409  Q
    |||||| ||||| ||||| | ||||||  ||||||| ||||||| |||||||| | || ||| |||| | ||||  ||||||| ||  |||| ||| |||    
T  52981271 ggcttactacattatttgattccttaacttatttttagttttcattttggtccccaaactatcaagtgtttcaaactggtcccttatgtcttctgttgtt 52981172  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||||||||||||||| | ||||||||||    
T  52981171 tactgttttggtcctcgcagttagttttt 52981143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 422
Target Start/End: Original strand, 56000282 - 56000394
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||| ||||||||  |||||||| |||||| |||| ||| |||| |||||||| |||||| || |||| |||| |||| || ||||    
T  56000282 ggcttaatacatgctttgatcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttagtcctataactcttctgccgtt 56000381  T
Q  410 tactgttttggtc 422  Q
    |||  ||||||||    
T  56000382 taccattttggtc 56000394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 401
Target Start/End: Original strand, 26376325 - 26376415
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatctt 401  Q
    |||||||| ||  |||||||||||||  ||||||||||||||| |||| ||| |||| ||||||   |||||| |||||||||||| ||||    
T  26376325 gcttaatatatgctttggtcccttaaattatttttggttttcattttgatcccctaactataaaacgtctcaatttggtcccataagtctt 26376415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 443
Target Start/End: Complemental strand, 38419063 - 38419005
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacat 443  Q
    |||||| ||||| |||| || ||||||||||||| ||| |||| |||||||||||||||    
T  38419063 ttggtctcataagtcttctgccgtttactgttttagtcatctccgttagtttttaacat 38419005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 308 - 386
Target Start/End: Complemental strand, 39135634 - 39135556
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||| |||||||||  |||||||||||||| ||||||||| ||||| ||| |||| |||| | |||| | ||||||||    
T  39135634 tttggtttaatacatgctttggtcccttaatttatttttggatttcaatttagtcccctaactttaaactgtctcaatt 39135556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 43895718 - 43895652
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagt 377  Q
    ||||||||| ||  |||||||||||||  |||||||||| || | |||||||| |||||||||||||    
T  43895718 ggcttaatagatagtttggtcccttaacttatttttggtatttagtttggtcccctaattataaagt 43895652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 438
Target Start/End: Original strand, 47667172 - 47667301
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    |||| |||||||||  |||||||| ||||  ||||||||||||| | |||||| |||||| |||||||| |||||| |||||| ||||| ||||    ||    
T  47667172 ttggattaatacatattttggtcctttaacttatttttggtttttattttggt-ctctaactataaagtgtctcaatttggtctcataagtcttcctccg 47667270  T
Q  408 tttactgttttggtcctctctgttagttttt 438  Q
    ||||||  | |||||||||  ||||||||||    
T  47667271 tttactaatatggtcctctgcgttagttttt 47667301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 441
Target Start/End: Original strand, 50530543 - 50530629
Alignment:
Q  356 tttggtcctctaattataaagtatctcaat-tggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaac 441  Q
    ||||||||| ||| ||| |||| ||||||  ||||||||||| |||| | ||||||||| |||||||| | ||||||| ||||||||    
T  50530543 tttggtcctttaactattaagtgtctcaaaatggtcccataactcttctatcgtttactattttggtcatttctgttaatttttaac 50530629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 325 - 422
Target Start/End: Complemental strand, 52882037 - 52881939
Alignment:
Q  325 tttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtc 422  Q
    |||||||||||||| ||||||||| ||| | |||||||| || | |||||||| |||||||| |||||| ||  || |||||||||  || ||||||||    
T  52882037 tttggtcccttaatttatttttggattttattttggtcccctgactataaagtgtctcaattaggtcccttatgtcatttgtcgttacctcttttggtc 52881939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 2309853 - 2309914
Alignment:
Q  325 tttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||||||| ||||||||| ||||| |||||||   |||||||||||| | ||||||    
T  2309853 tttggtcccttaatttatttttggatttcattttggtctcataattataaagtgtttcaatt 2309914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 17319112 - 17319185
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    ||||| ||||||||||| || |||||||| |||||||| || | ||||||||||||| | |||| | |||||||    
T  17319112 ttggttccataaatcttctggcgtttactattttggtcttcaccgttagtttttaaccttaaatgtctaaggtg 17319185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 434
Target Start/End: Complemental strand, 50531802 - 50531753
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagt 434  Q
    |||||||||||| |||||||||||||||| |||| ||| | |||||||||    
T  50531802 ttggtcccataactcttttgtcgtttactattttagtcatttctgttagt 50531753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 54374073 - 54374016
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    |||||||||||||||||| ||||||||  ||||||  ||||||| |||||||| ||||    
T  54374073 ggcttaatacatcatttgatcccttaacttattttcagttttcaatttggtcccctaa 54374016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 23202235 - 23202287
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcc 363  Q
    ||||||||||||  |||||||||||||| ||||||||  ||||| ||||||||    
T  23202235 ggcttaatacatgctttggtcccttaatttatttttgaatttcattttggtcc 23202287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 386
Target Start/End: Original strand, 26428650 - 26428726
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||||||  |||||||||||||  ||||||||  ||||| |||||||| |||| | |||| | ||||||||    
T  26428650 tggcttaatacatgctttggtcccttaacttatttttgaatttcagtttggtcccctaactttaaactgtctcaatt 26428726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 455
Target Start/End: Complemental strand, 36604857 - 36604817
Alignment:
Q  415 ttttggtcctctctgttagtttttaacatcaaatatttaag 455  Q
    ||||||||||||| |||||||||||| ||||||||| ||||    
T  36604857 ttttggtcctctccgttagtttttaatatcaaatatctaag 36604817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 44664447 - 44664395
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcc 363  Q
    ||||||||||||| |||||||||||||  ||||||||| ||| | ||||||||    
T  44664447 ggcttaatacatcctttggtcccttaacttatttttggattttattttggtcc 44664395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 49923917 - 49923865
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcc 363  Q
    ||||||||| |||||||||||||||||  ||||||  ||||||| ||||||||    
T  49923917 ggcttaatatatcatttggtcccttaacttattttcagttttcaatttggtcc 49923865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 6e-42; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 308 - 490
Target Start/End: Complemental strand, 52743100 - 52742917
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    |||||||||||||||||||||||||||||   |||||||  ||||||||||||||| |||| |||||||| |||||| |||||||| ||  | || ||||    
T  52743100 tttggcttaatacatcatttggtcccttagcttatttttcattttcactttggtcccctaactataaagtgtctcaaattggtcccttaggttttatgtc 52743001  T
Q  407 gtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacct 490  Q
    |||||||||| |||||||||| |||||||||||||||||||| ||||||||| || |||||||||  || | ||||||||||||    
T  52743000 gtttactgttatggtcctctccgttagtttttaacatcaaatgtttaaggtgaaccatgtttaaaggtggtacaccatagacct 52742917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 25785963 - 25786087
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||||| |||| |||||||| |||||| ||||||||||||||||| |||||||    
T  25785963 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgtcgtt 25786062  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    || | ||||||||||||||||||||    
T  25786063 tattattttggtcctctctgttagt 25786087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 311 - 441
Target Start/End: Complemental strand, 14071324 - 14071193
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||| |||||| |||||||||||| |||| |||||||    
T  14071324 ggcttaatacatcatttggtcccttaatttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttctgtcgtt 14071225  T
Q  410 tactgttttggtcctctctgttagtttttaac 441  Q
    |||  |||||||||| || ||| |||||||||    
T  14071224 taccattttggtcctttccgtttgtttttaac 14071193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 313 - 447
Target Start/End: Complemental strand, 26056266 - 26056131
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgttta 411  Q
    ||||||||||  |||||||||||||  ||||||||| ||||| |||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||    
T  26056266 cttaatacatactttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttttgtcgttta 26056167  T
Q  412 ctgttttggtcctctctgttagtttttaacatcaaa 447  Q
    || ||||||||||||| ||||| |||||||||||||    
T  26056166 ctattttggtcctctccgttagattttaacatcaaa 26056131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 316 - 441
Target Start/End: Complemental strand, 13930791 - 13930665
Alignment:
Q  316 aatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactg 414  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||||||| |||||||| |||||| |||||||||||| |||| ||||||||||      
T  13930791 aatacatcatttggtcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttacca 13930692  T
Q  415 ttttggtcctctctgttagtttttaac 441  Q
    |||||||||| || ||| |||||||||    
T  13930691 ttttggtcctttccgtttgtttttaac 13930665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 308 - 491
Target Start/End: Original strand, 21276986 - 21277170
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||| ||||||   |||| ||||||||||||||| ||||||||||||||||| || |    
T  21276986 tttggcttaatacattatttggtcccttaacttatttttggttttcaatttggttgcctaactataaagtatctcaatttggtcccataaatcttctgcc 21277085  T
Q  407 gtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    ||||||| ||||| |||||||  ||||||||| || | |||| | ||||||| || |  |||| |  || |||||||||||||||    
T  21277086 gtttactattttgatcctctccattagtttttgaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagacctt 21277170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 25787285 - 25787161
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||||| |||| |||||||| |||||| |||||| |||||||||| || | ||    
T  25787285 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtctcataaatcttatgccatt 25787186  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    |||| ||||||||||||| ||||||    
T  25787185 tactattttggtcctctccgttagt 25787161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 314 - 491
Target Start/End: Original strand, 9633773 - 9633951
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttac 412  Q
    ||||||||| ||||||||| ||||  ||||||||||||||| ||||||||  ||| |||||||| |||||||| |||   |||||||||    |||||||    
T  9633773 ttaatacataatttggtcctttaacttatttttggttttcattttggtcccttaactataaagtgtctcaatttggttatataaatcttcaaccgtttac 9633872  T
Q  413 tgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
     |||||| ||||||| |||||||||||||||||||| | ||||||| || |||||||||  || |||||||||||||||    
T  9633873 agttttgatcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagacctt 9633951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 302 - 471
Target Start/End: Original strand, 44977207 - 44977377
Alignment:
Q  302 tttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatc-tcaattggtcccataaatct 400  Q
    |||| |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| |||| |||||||| || | || ||||||| ||  |||    
T  44977207 tttaagtttggcttaatacattatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaaactggtcccttatgtct 44977306  T
Q  401 tttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaa 471  Q
    | || ||||  ||  ||||||| ||||||||||||||||||||||||| | ||||||| || || ||||||    
T  44977307 tctgccgttacctcatttggtcatctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaa 44977377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 308 - 491
Target Start/End: Complemental strand, 49141620 - 49141436
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||||||| | |||  ||| ||| |||| | |||| |||||||||||| | || || |    
T  49141620 tttggcttaatacatcgtttggtcctttaatttatttttggttttcacttcgatcccttaactattaagtgtttcaaattggtcccataatttttctgcc 49141521  T
Q  407 gtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    ||||||  |||| ||| |||| |||||||||||||||||||| | ||||||| || || ||||||  || |||||||||||||||    
T  49141520 gtttaccattttagtcatctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaagttgttccaccatagacctt 49141436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 311 - 432
Target Start/End: Original strand, 3978039 - 3978161
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||||  ||||| ||||||||| ||| |||||||| |||||| ||| |||||||| |||| |||||||    
T  3978039 ggcttaatacatcatttggtcccttaacttatttttgaatttcattttggtcctttaactataaagtgtctcaatttgatcccataattcttctgtcgtt 3978138  T
Q  410 tactgttttggtcctctctgtta 432  Q
    |||| ||||||||||||| ||||    
T  3978139 tactattttggtcctctccgtta 3978161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 314 - 438
Target Start/End: Original strand, 13641255 - 13641380
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    |||||||||  |||| ||||||||  |||||||||||||||||||||||| |||| |||||||| |||||| ||||||||||||||||| || |||||||    
T  13641255 ttaatacatgctttgatcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttac 13641354  T
Q  413 tgttttggtcctctctgttagttttt 438  Q
    | |||||||| |||| |||| |||||    
T  13641355 tattttggtcatctccgttatttttt 13641380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 312 - 434
Target Start/End: Original strand, 47410980 - 47411103
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttt 410  Q
    ||||||||||| ||||||||||||||  |||||||| |||||| |||| ||| |||| |||||||| |||||| |||||| |||||||||| ||||||||    
T  47410980 gcttaatacataatttggtcccttaaattatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtctcataaatcttatgtcgttt 47411079  T
Q  411 actgttttggtcctctctgttagt 434  Q
    ||| |||||||| |||| ||||||    
T  47411080 actattttggtcatctccgttagt 47411103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 308 - 434
Target Start/End: Complemental strand, 47411572 - 47411445
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||  |||||| | |||| |||||||| |||||| ||||||||||||||||| || |    
T  47411572 tttggcttaatacatcatttggtcccttaacttattttcggttttccatttggttccctaactataaagtgtctcaatttggtcccataaatcttatgcc 47411473  T
Q  407 gtttactgttttggtcctctctgttagt 434  Q
    ||||||| ||||| | ||||| ||||||    
T  47411472 gtttactattttgattctctccgttagt 47411445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 16218599 - 16218475
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||| ||||||| |||||||||| ||||||| ||||||  | || ||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  16218599 ggcttaatagatcatttagtcccttaatttatttttagttttctatctgatcccctaactataaagtatctcaatttggtcccataaatcttatgtcgtt 16218500  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    || | |||||||| |||| ||||||    
T  16218499 taatattttggtcatctccgttagt 16218475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 308 - 384
Target Start/End: Original strand, 33793771 - 33793847
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa 384  Q
    ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||| ||||||||||||| ||||||    
T  33793771 tttggcttaatacatcatttgatcccttaacttatttttggttttcactttggtcccctaattataaagtgtctcaa 33793847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 47136808 - 47136684
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||| ||| ||||  ||||||||||||||| || ||||| |||| |||||||| |||||| |||||  |||||||||| || ||||    
T  47136808 ggcttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgtt 47136709  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    |||| ||||||||||||| ||||||    
T  47136708 tactattttggtcctctccgttagt 47136684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 3979434 - 3979311
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||| |||||| ||||||||||||||  ||||||||| ||||| ||||||||  ||| |||||||| |||||| |||||||||||| |||| || ||||    
T  3979434 ggcttgatacattatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgccgtt 3979335  T
Q  410 tactgttttggtcctctctgttag 433  Q
    |||| ||||||||||||| |||||    
T  3979334 tactattttggtcctctccgttag 3979311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 458
Target Start/End: Original strand, 14169659 - 14169762
Alignment:
Q  356 tttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaa 454  Q
    ||||||||| ||| |||||| | |||||||| ||||||||||||||||||||||||||| |||||||| | |||||||||||||||| | |||| | |||    
T  14169659 tttggtcctttaactataaaatgtctcaatttggtcccataaatcttttgtcgtttactattttggtcttatctgttagtttttaaccttaaatgtctaa 14169758  T
Q  455 ggtg 458  Q
    ||||    
T  14169759 ggtg 14169762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 14390253 - 14390379
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||||   ||||| ||||||||||||| |||||| | |||||| ||||| ||||||||||| | |||||    
T  14390253 ggcttaatacatgctttggtcccttaacttattttttaatttcattttggtcctctaactataaaatgtctcaatttggttccataaatcttctttcgtt 14390352  T
Q  410 tactgttttggtcctctctgttagttt 436  Q
    |||  ||||||||||||| ||||||||    
T  14390353 taccattttggtcctctccgttagttt 14390379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 313 - 438
Target Start/End: Original strand, 52741485 - 52741611
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc-aattggtcccataaatcttttgtcgttta 411  Q
    ||||||| |||||||||||||||||  ||||||| ||||| | ||||||||||||| |||||||| |||| ||||| |||| ||  |||| |||| ||||    
T  52741485 cttaatatatcatttggtcccttaacttatttttcgtttttattttggtcctctaactataaagtgtctcaaattgatcccttatgtcttctgtcattta 52741584  T
Q  412 ctgttttggtcctctctgttagttttt 438  Q
     |||||||||||||||  |||||||||    
T  52741585 ttgttttggtcctctccattagttttt 52741611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 313 - 401
Target Start/End: Original strand, 13929292 - 13929381
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatctt 401  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||||||  ||| |||||||| |||||| |||||||| ||||||||    
T  13929292 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtcccgtaaatctt 13929381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 19466281 - 19466188
Alignment:
Q  356 tttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaat 448  Q
    ||||||||| ||| |||||||| |||||||| ||||||||||||||| ||||||||||| || |||| ||||| ||||||||||||| ||||||    
T  19466281 tttggtcctttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattgtggttctctccgttagtttttaacctcaaat 19466188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 314 - 438
Target Start/End: Original strand, 49139799 - 49139924
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    ||||||||||||||||||||||||  ||||||||||||||  ||||||||  ||| |||||||| |||||| |||||| ||||||||||  |  ||||||    
T  49139799 ttaatacatcatttggtcccttaacttatttttggttttcgttttggtcccataactataaagtgtctcaatttggtctcataaatcttccgcagtttac 49139898  T
Q  413 tgttttggtcctctctgttagttttt 438  Q
    | |||||||  |||| ||||||||||    
T  49139899 tattttggtaatctccgttagttttt 49139924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 16217435 - 16217559
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||| ||||| | ||||||  ||||||||||||| | |||| || ||||| |||||||| |||||| ||||||| ||||||||| |||| ||    
T  16217435 ggcttaatacataatttgattccttaacttatttttggtttttaatttgatcatctaactataaagtgtctcaatttggtcctataaatcttatgtcatt 16217534  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    |||| |||||||| |||| ||||||    
T  16217535 tactattttggtcatctccgttagt 16217559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 47560134 - 47560262
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||||||||||||   |||||| | ||||||||||||||| |||| |||||||| | |||| ||| |||  ||||| || || ||||    
T  47560134 ggcttaatacatcatttggtcccttaccttattttcgattttcactttggtcccctaactataaagtgtttcaatttgatcctttaaatattctgccgtt 47560233  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    ||||||||||||| |||| |||| |||||    
T  47560234 tactgttttggtcatctccgttaattttt 47560262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 537 - 596
Target Start/End: Complemental strand, 30551483 - 30551424
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  30551483 gattgttggatcatgtagggtctattgtattttagtgtgaaccactaacacctaatattt 30551424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 538 - 596
Target Start/End: Original strand, 27689510 - 27689568
Alignment:
Q  538 attgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    ||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  27689510 attgttggatcatgtagggtctattgtattttagtgtgaaccactaacacctaatattt 27689568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 311 - 432
Target Start/End: Complemental strand, 52181426 - 52181304
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||| || ||||||||| ||||  |||||||  |||||| ||||||||||||| |||||||| |||||| || ||| |||||||||| ||| |||    
T  52181426 ggcttaatagataatttggtcctttaacttattttttattttcaatttggtcctctaactataaagtgtctcaatttagtctcataaatcttatgttgtt 52181327  T
Q  410 tactgttttggtcctctctgtta 432  Q
    |||| |||||||| |||| ||||    
T  52181326 tactattttggtcatctccgtta 52181304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 14764299 - 14764372
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    |||||| ||||| |||| |||||||||||||||| ||| |||||||||||||||||||| |||| |||||||||    
T  14764299 ttggtctcataagtcttctgtcgtttactgttttagtcatctctgttagtttttaacattaaatgtttaaggtg 14764372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 329 - 437
Target Start/End: Complemental strand, 36511434 - 36511325
Alignment:
Q  329 gtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcctctc 427  Q
    |||||||||| ||||||   || ||| ||||||||  ||| |||||||| |||||||| ||||||||||||||| ||||||||||| |||||||| ||||    
T  36511434 gtcccttaatttattttattttctcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattttggtcatctc 36511335  T
Q  428 tgttagtttt 437  Q
     |||||||||    
T  36511334 cgttagtttt 36511325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 311 - 422
Target Start/End: Original strand, 26054893 - 26055004
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||| | | ||||||||| ||||| |||||||| |||| |||||||| | |||||| ||| ||||||||||| |||||||    
T  26054893 ggcttaatacatgctttggtccctaact-tatttttggatttcattttggtcccctaactataaagtgtttcaatttggttccataaatcttctgtcgtt 26054991  T
Q  410 tactgttttggtc 422  Q
    |||| ||||||||    
T  26054992 tactattttggtc 26055004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 34653430 - 34653505
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||| ||||||||||||||||||||||  |||||| |||||||||||||||||  ||| |||||||| ||||||||    
T  34653430 ggctcaatacatcatttggtcccttaacttattttcggttttcactttggtcccttaactataaagtgtctcaatt 34653505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 537 - 596
Target Start/End: Complemental strand, 37624464 - 37624405
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    |||||||| ||||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  37624464 gattgttgaatcatgtagggtctattgtattttagtgtgaaccactaacacctaatattt 37624405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 2238099 - 2237973
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| ||||||||  ||| |||||||| |||||| |||||||| ||  |||| |||||||    
T  2238099 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 2238000  T
Q  410 tactgttttggtcctctctgttagttt 436  Q
      || ||||||||||||| ||||||||    
T  2237999 acctcttttggtcctctccgttagttt 2237973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 311 - 489
Target Start/End: Original strand, 50678361 - 50678537
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaattggtcccataaatcttttgtcgttt 410  Q
    |||||||||||| ||||||||||||||  ||||||||  ||||| |||| |||  ||| |||||| | |||||||| | ||  ||||||| | | ||||     
T  50678361 ggcttaatacatgatttggtcccttaacttatttttgaatttcattttgatcccttaactataaaatgtctcaatttggcct-taaatctct-gccgtta 50678458  T
Q  411 actgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacc 489  Q
     || |||||||||||||||||||||||||||||||||  | ||||||| || || ||||||  || | |||||||||||    
T  50678459 cctcttttggtcctctctgttagtttttaacatcaaaactctaaggtgaaccatatttaaaggtggttcaccatagacc 50678537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 6709878 - 6709997
Alignment:
Q  82 gactcacaatatatgataatttatattatatttccttatttgtctttaatttcataagattaaaaatcacaaatgatcttcatctt----tctcttcatc 177  Q
    ||||||||| ||||||| |||||||  || ||||| |||||||||| |||||  ||| |||||||||||| ||  |||||||||||     |||||||||    
T  6709878 gactcacaacatatgatcatttata--atctttccctatttgtcttgaattttctaaaattaaaaatcaccaacaatcttcatcttcttccctcttcatc 6709975  T
Q  178 ttccaacttcatccccataaca 199  Q
    | ||||||||||||||||||||    
T  6709976 tcccaacttcatccccataaca 6709997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 314 - 461
Target Start/End: Complemental strand, 2973126 - 2972978
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    |||||| || ||||| ||||||||  ||||||| ||||||| ||| ||||  |||||||||||| |||||| ||||||| |||| ||||    |||||||    
T  2973126 ttaatatattatttgatcccttaacttattttttgttttcattttagtcccttaattataaagtgtctcaatttggtcctataagtcttaccccgtttac 2973027  T
Q  413 tgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtac 461  Q
    |  | ||||||| |||||||||||||||| | |||| | ||||||||||    
T  2973026 tagtgtggtcctttctgttagtttttaactttaaatgtctaaggtgtac 2972978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 344 - 419
Target Start/End: Original strand, 9592266 - 9592342
Alignment:
Q  344 tttggttttcactttggtcctctaattataaagtatctcaattgg-tcccataaatcttttgtcgtttactgttttg 419  Q
    |||| ||||||||||||||| |||| |||||||| | |||||| | ||||||||||||||||||||||||| |||||    
T  9592266 tttgattttcactttggtcccctaactataaagtgtttcaatttgatcccataaatcttttgtcgtttactattttg 9592342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 311 - 383
Target Start/End: Complemental strand, 13642678 - 13642606
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctca 383  Q
    ||||||||||||  |||||||| ||||  ||||||||||||||| ||||||||||||||| |||||| |||||    
T  13642678 ggcttaatacatgctttggtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctca 13642606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 20953283 - 20953411
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  ||||||||| ||||| ||| || || ||| |||||||| |||||| ||||||| |||||||||  ||| ||    
T  20953283 ggcttaatacatgctttggtcccttaacttatttttggatttcattttagttctataactataaagtgtctcaatttggtcctataaatcttaagtcatt 20953382  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||  |||| |||||||| ||||| ||||    
T  20953383 taccattttagtcctctccgttagatttt 20953411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 537 - 593
Target Start/End: Complemental strand, 23082020 - 23081964
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaata 593  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||| |||||||||||    
T  23082020 gattgttggataatgtaaggtctattgtattttagtgtaaaccactaacacctaata 23081964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 356 - 491
Target Start/End: Complemental strand, 51726920 - 51726784
Alignment:
Q  356 tttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaa 454  Q
    ||||||| | ||| |||||||| |||||||| ||| ||||||||||| ||||||||||| |||| |||||| | ||||||||||||| | |||| | |||    
T  51726920 tttggtcatttaactataaagtgtctcaatttggttccataaatcttctgtcgtttactattttagtcctcaccgttagtttttaaccttaaatgtctaa 51726821  T
Q  455 ggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    |||| || |  |||| |  || |||||||||||||||    
T  51726820 ggtgaaccaactttataggtggtccaccatagacctt 51726784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 2236808 - 2236939
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| |||||||| |||||| |||||||| ||  |||| |||||||    
T  2236808 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 2236907  T
Q  410 tactgttttggtcctctctgttagtttttaac 441  Q
      || ||||| ||||||| ||||  |||||||    
T  2236908 acctcttttgatcctctccgttacattttaac 2236939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 35683050 - 35683181
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| |||||||| |||||| |||||||| ||  |||| || ||||    
T  35683050 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgtt 35683149  T
Q  410 tactgttttggtcctctctgttagtttttaac 441  Q
      || ||||||||||||| ||||  |||||||    
T  35683150 acctcttttggtcctctccgttacattttaac 35683181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 432
Target Start/End: Original strand, 48467263 - 48467377
Alignment:
Q  318 tacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactgtt 416  Q
    ||||||||||||||||||||  ||||||| ||||||| |||||| | |||| |||||||| | |||| |||||| | |||||||| ||||  ||||||||    
T  48467263 tacatcatttggtcccttaacttattttttgttttcaatttggttccctaactataaagtgtttcaatttggtctcttaaatcttatgtc-attactgtt 48467361  T
Q  417 ttggtcctctctgtta 432  Q
    |||||| |||| ||||    
T  48467362 ttggtcatctccgtta 48467377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 302 - 426
Target Start/End: Complemental strand, 42248436 - 42248310
Alignment:
Q  302 tttatgtttggcttaatacat-catttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatc 399  Q
    ||||| |||||||||||||||   |||||||| | ||  ||||||||| ||||| ||||||||  ||| |||||||| |||||| ||||||| |||||||    
T  42248436 tttatttttggcttaatacatgtttttggtccttcaacttatttttggatttcattttggtcccataactataaagtgtctcaatttggtcctataaatc 42248337  T
Q  400 ttttgtcgtttactgttttggtcctct 426  Q
    || ||||||||||  |||| |||||||    
T  42248336 ttatgtcgtttaccattttagtcctct 42248310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 308 - 386
Target Start/End: Original strand, 51424243 - 51424321
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||||   |||||||||||||  ||||||||| ||||| ||||||||  |||||||||||| ||||||||    
T  51424243 tttggcttaatacaagctttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatt 51424321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 310 - 368
Target Start/End: Complemental strand, 52439407 - 52439349
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    ||||||||||||||||||||||||||||  ||||||  ||||||| |||||||||||||    
T  52439407 tggcttaatacatcatttggtcccttaacttattttctgttttcaatttggtcctctaa 52439349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 36509851 - 36509944
Alignment:
Q  356 tttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaat 448  Q
    ||||||||  ||| |||||||| | |||||| ||| ||||||||||| || |||||||| ||||||| ||||| ||||||||||||| ||||||    
T  36509851 tttggtcccttaactataaagtgtttcaatttggttccataaatcttctgccgtttactattttggttctctccgttagtttttaacctcaaat 36509944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 49619940 - 49619883
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    |||||||||||||||||||||||||||| ||||||  ||||||| |||||||| ||||    
T  49619940 ggcttaatacatcatttggtcccttaatttattttcagttttcaatttggtcccctaa 49619883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 314 - 438
Target Start/End: Complemental strand, 50679939 - 50679814
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    |||||||||  |||||||||||||  ||||||| ||||| | ||||||||  ||| |||||||| |||||| |||||||||||| ||||    |||||||    
T  50679939 ttaatacatgctttggtcccttaacttatttttagtttttattttggtcccttaactataaagtgtctcaatttggtcccataagtcttcctccgtttac 50679840  T
Q  413 tgttttggtcctctctgttagttttt 438  Q
    |  | |||||||||| ||||||||||    
T  50679839 taatatggtcctctccgttagttttt 50679814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 14312770 - 14312902
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||| ||||||||||||||  ||||||||| ||| | |||||||  |||  |||||||| |||||| |||||||| ||  ||||||||| ||    
T  14312770 ggcttaatacatgatttggtcccttaacttatttttggattttattttggtctcctagctataaagtgtctcaatttggtcccttatgtcttttgtcatt 14312869  T
Q  410 tactgttttggtcctctctgttagtttttaaca 442  Q
      || |||||||||| || ||||  ||||||||    
T  14312870 acctcttttggtcctatccgttacattttaaca 14312902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 385 - 441
Target Start/End: Original strand, 22167849 - 22167905
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaac 441  Q
    ||||||||||||||||| || |||||| | ||||||| |||||||||||||||||||    
T  22167849 ttggtcccataaatcttctgccgtttattattttggttctctctgttagtttttaac 22167905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 436
Target Start/End: Original strand, 34531656 - 34531784
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    |||| |||||||||  |||||||||||||  |||||| || ||||| ||||||||||||| |||||| | |||||| |||||| | ||  |||| |||||    
T  34531656 ttggtttaatacatgctttggtcccttaacttattttcggatttcattttggtcctctaactataaaatgtctcaatttggtctcttatgtcttctgtcg 34531755  T
Q  408 tttactgttttggtcctctctgttagttt 436  Q
    ||  || ||||||||||||| || |||||    
T  34531756 ttatctcttttggtcctctccgtaagttt 34531784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 436
Target Start/End: Original strand, 48973191 - 48973319
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    ||||||||||||||  |||||| ||||||  |||||| || ||||| ||| |||| |||| |||||||| |||||| ||| |||| ||  |||| |||||    
T  48973191 ttggcttaatacatgctttggttccttaacttattttcggatttcattttagtcccctaactataaagtgtctcaatttgatcccttatgtcttctgtcg 48973290  T
Q  408 tttactgttttggtcctctctgttagttt 436  Q
    ||  || |||||| |||||||||||||||    
T  48973291 ttacctcttttggccctctctgttagttt 48973319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 396
Target Start/End: Original strand, 2971693 - 2971780
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgta-tttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataa 396  Q
    ||||||||||||||||| || ||||||  || |||||  |||||||||| ||||||||| |||||||| |||||| ||||||||||||    
T  2971693 ggcttaatacatcatttagttccttaacttatttttttattttcactttagtcctctaactataaagtgtctcaatttggtcccataa 2971780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 309 - 368
Target Start/End: Original strand, 38451545 - 38451604
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    |||||||||||||||||||||||||||||  ||||||  ||||||| |||||||| ||||    
T  38451545 ttggcttaatacatcatttggtcccttaacttattttatgttttcaatttggtcccctaa 38451604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 539 - 592
Target Start/End: Original strand, 44977421 - 44977474
Alignment:
Q  539 ttgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaat 592  Q
    ||||| |||||||||||||||||||||||| ||||| |||||| | ||||||||    
T  44977421 ttgtttgatcatgtagggtctattgtatttaattgtgaaccactaccacctaat 44977474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 311 - 384
Target Start/End: Original strand, 44979430 - 44979503
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa 384  Q
    |||||||||||||||||  ||||||||  ||||||| |||||||||||||||   ||| |||||||| ||||||    
T  44979430 ggcttaatacatcatttaatcccttaacttattttttgttttcactttggtctcttaactataaagtgtctcaa 44979503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 314 - 441
Target Start/End: Original strand, 1872935 - 1873063
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    |||||||||  |||||||||||||| |||||| || ||||| |||||||  ||||||| ||||| ||| || |||||||| ||  ||||||| ||||  |    
T  1872935 ttaatacatgttttggtcccttaatttattttcggatttcattttggtctcctaattaaaaagtgtcttaatttggtcccttatgtcttttgccgttacc 1873034  T
Q  413 tgttttggtcctctctgttagtttttaac 441  Q
    | |||||||||  |||||||  |||||||    
T  1873035 tcttttggtcccatctgttatattttaac 1873063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 308 - 372
Target Start/End: Complemental strand, 40779767 - 40779703
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattat 372  Q
    |||| ||||||||||| |||||||||||||| ||||||  ||||||| ||| ||| |||||||||    
T  40779767 tttgacttaatacatcgtttggtcccttaatttattttcagttttcaatttagtcatctaattat 40779703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 417 - 485
Target Start/End: Complemental strand, 51218980 - 51218912
Alignment:
Q  417 ttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccata 485  Q
    ||||||||||| |||||||||||||||||||| | ||| ||| || || |||||| ||| |||||||||    
T  51218980 ttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaagatggtccaccata 51218912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 580
Target Start/End: Complemental strand, 22766713 - 22766670
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaacca 580  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||    
T  22766713 gattgttggataatgtaaggtctattgtattttagtgtaaacca 22766670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 371
Target Start/End: Original strand, 30548488 - 30548551
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaatta 371  Q
    |||||||||||||||  |||||||||||||  ||||||||| ||||| ||| |||| |||||||    
T  30548488 tttggcttaatacatgctttggtcccttaacttatttttggatttcattttcgtcccctaatta 30548551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 33941312 - 33941387
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||||||||||||  ||||||||  ||| | ||||||||| |||||||||| | ||||||||    
T  33941312 ggcttaatacatgctttggtcccttaacttatttttgaattttattttggtcctttaattataaaatgtctcaatt 33941387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 327 - 424
Target Start/End: Original strand, 9119813 - 9119911
Alignment:
Q  327 tggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactgttttggtcct 424  Q
    |||||||||||  |||||| || ||| | ||||||||||||| |||||||| |||||| |||||||  ||  ||||||||||||  || ||||||||||    
T  9119813 tggtcccttaacttattttcggattttaatttggtcctctaactataaagtgtctcaatttggtccgttatgtcttttgtcgttacctcttttggtcct 9119911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 23082172 - 23082066
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccat 484  Q
    |||||||| || || || |||||||  || |||||||||| || |||||||||||||| ||||||| ||| ||| || || ||||||  || ||||||||    
T  23082172 ttggtcccttatattttctgtcgttgcctcttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtccaccat 23082073  T
Q  485 agacctt 491  Q
     ||||||    
T  23082072 ggacctt 23082066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 308 - 338
Target Start/End: Complemental strand, 34654467 - 34654437
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaat 338  Q
    |||||||||||||||||||||||||||||||    
T  34654467 tttggcttaatacatcatttggtcccttaat 34654437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 35684323 - 35684198
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||| ||||  |||||| || ||| | |||||||| |||| |||||| | |||||| |||||||| ||  |||| |||||||    
T  35684323 ggcttaatacatgctttggtccattaacttattttcggattttattttggtcccctaactataaa-tgtctcaatttggtcccttatgtcttctgtcgtt 35684225  T
Q  410 tactgttttggtcctctctgttagttt 436  Q
      || ||||||||||||| ||||||||    
T  35684224 acctcttttggtcctctccgttagttt 35684198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 392
Target Start/End: Complemental strand, 48974527 - 48974445
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtccc 392  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| |||||| | |||| |||||||| |||||| ||||||||    
T  48974527 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggttccctaactataaagtgtctcaacttggtccc 48974445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 596
Target Start/End: Complemental strand, 52742869 - 52742811
Alignment:
Q  538 attgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    ||||||||||||   ||| |||||||||||||| ||||||||||  |||||||||||||    
T  52742869 attgttggatcacaaaggatctattgtattttactgtaaaccactgacacctaatattt 52742811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 37624586 - 37624553
Alignment:
Q  415 ttttggtcctctctgttagtttttaacatcaaat 448  Q
    ||||||||||||| ||||||||||||||||||||    
T  37624586 ttttggtcctctccgttagtttttaacatcaaat 37624553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 386
Target Start/End: Original strand, 48934234 - 48934311
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||||  |||  ||||||||  |||||| || ||||| |||||||| |||| |||||||| ||||||||    
T  48934234 ttggcttaatacatgttttaatcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 48934311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 349 - 436
Target Start/End: Original strand, 19464633 - 19464721
Alignment:
Q  349 ttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagttt 436  Q
    |||||| ||||||||  |||||||||||| | |||| ||||| ||| ||||||| || |||||||| |||||||| ||||  |||||||    
T  19464633 ttttcagtttggtcccttaattataaagtgtttcaatttggttccacaaatcttctgccgtttactattttggtcatctccattagttt 19464721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 491
Target Start/End: Complemental strand, 22766836 - 22766760
Alignment:
Q  415 ttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    |||||||||| || |||||||||||||| ||||||| ||| ||| || || ||||||  || |||||||| ||||||    
T  22766836 ttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtccaccatggacctt 22766760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 29001243 - 29001191
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcc 363  Q
    ||||||||||||  |||||||||||||  ||||||||| ||||| ||||||||    
T  29001243 ggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcc 29001191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 31860579 - 31860504
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattat-aaagtatctcaatt 386  Q
    ||||||||||||  |||||||||||||  ||||||||  ||||| |||||||| |||| ||| ||||||||||||||    
T  31860579 ggcttaatacatgttttggtcccttaacttatttttgaatttcattttggtcc-ctaactataaaagtatctcaatt 31860504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 38458084 - 38458156
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||  |||||||||||||  ||||||||| ||||| |||||||| |||| | |||| | ||||||||    
T  38458084 ttaatacatgctttggtcccttaacttatttttggatttcaatttggtcccctaactttaaattgtctcaatt 38458156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 441
Target Start/End: Original strand, 40811269 - 40811321
Alignment:
Q  389 tcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaac 441  Q
    |||||||| ||||||| |||||| | |||||||| |||| |||||||||||||    
T  40811269 tcccataactcttttgccgtttattattttggtcatctccgttagtttttaac 40811321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 42244502 - 42244574
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||  |||||||||||||  ||||||||| ||||| ||||||| | ||| |||||| | ||||||||    
T  42244502 ttaatacatgttttggtcccttaacttatttttggatttcattttggtcatataactataaaatgtctcaatt 42244574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 9e-41; HSPs: 87)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 311 - 491
Target Start/End: Original strand, 40930413 - 40930594
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||| |||| |||||| || |||||||||||||||||||||||| |||| |||||||| | |||||| ||||||||||||||||||  |||    
T  40930413 ggcttaatacatcgtttgatcccttgatttatttttggttttcactttggtcccctaactataaagtgtttcaatttggtcccataaatcttttgatgtt 40930512  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    ||| ||||| ||||||||| ||||||||||||||||||||| ||||||| || ||| || ||  |||||| ||||| |||||    
T  40930513 taccgttttagtcctctctattagtttttaacatcaaatatctaaggtggaccatgattcaaggtgatcccccatatacctt 40930594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 309 - 463
Target Start/End: Original strand, 4857194 - 4857349
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcg 407  Q
    ||||| |||||||||||||| ||||||||  |||||||||||||||||||||||| |||| |||||| | |||| ||| ||||||| ||||||| || ||    
T  4857194 ttggcctaatacatcatttgatcccttaacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtcccacaaatcttctgccg 4857293  T
Q  408 tttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtacta 463  Q
    ||||||||||| |||||||| |||||||||||||||||||| | ||||||| ||||    
T  4857294 tttactgttttagtcctctccgttagtttttaacatcaaatgtctaaggtgaacta 4857349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 311 - 471
Target Start/End: Original strand, 38406013 - 38406174
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc-aattggtcccataaatcttttgtcgtt 409  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||||| |||| |||||||| |||| || |||| ||||||||||| || ||||    
T  38406013 ggcttaatacattatttggtcctttaatttatttttggttttcattttggtcccctaactataaagtgtctcaaactggttccataaatcttctgacgtt 38406112  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaa 471  Q
    ||||||||||||||| || |||| ||||||||||||||| | ||||||| || || ||||||    
T  38406113 tactgttttggtcctttccgttaatttttaacatcaaatgtctaaggtgaaccatatttaaa 38406174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 313 - 434
Target Start/End: Complemental strand, 19279731 - 19279609
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttta 411  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||||| |||| |||||||| |||||| |||||||||||||| ||||||||||||    
T  19279731 cttaatacatcgtttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttttgtcgttta 19279632  T
Q  412 ctgttttggtcctctctgttagt 434  Q
    || |||||||||| || ||||||    
T  19279631 ctattttggtcctttccgttagt 19279609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 313 - 464
Target Start/End: Original strand, 43930316 - 43930468
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgttta 411  Q
    ||||||| |||||||||||||||||  |||||||| ||||||||||||||| |||| ||| ||   |||||||| ||||| ||||||||| |||||||||    
T  43930316 cttaatatatcatttggtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttctgtcgttta 43930415  T
Q  412 ctgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactat 464  Q
    || |||||||||||||||||| |||||||| | |||| | ||||||| |||||    
T  43930416 ctattttggtcctctctgttaatttttaaccttaaatgtctaaggtggactat 43930468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 309 - 426
Target Start/End: Original strand, 19278346 - 19278464
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||| ||||||||  |||||||||||| |||||| |||||||||||| |||| || ||    
T  19278346 ttggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataattcttctgccg 19278445  T
Q  408 tttactgttttggtcctct 426  Q
    |||||| ||||||||||||    
T  19278446 tttactattttggtcctct 19278464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 321 - 491
Target Start/End: Complemental strand, 14109180 - 14109011
Alignment:
Q  321 atcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaat-tggtcccataaatcttttgtcgtttactgttttg 419  Q
    |||||||||||||||||  |||||||  |||||||||||||||  ||| |||||| | ||||||  |||||||||   ||||||| ||||||| |||||     
T  14109180 atcatttggtcccttaacttatttttaattttcactttggtcccttaactataaaatgtctcaaactggtcccatg--tcttttgccgtttaccgtttta 14109083  T
Q  420 gtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    |||||||| |||||||||||||||||||| | ||||||| || |||||||||  || |||||||||||||||    
T  14109082 gtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagacctt 14109011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 321 - 491
Target Start/End: Complemental strand, 14419137 - 14418968
Alignment:
Q  321 atcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaat-tggtcccataaatcttttgtcgtttactgttttg 419  Q
    |||||||||||||||||  |||||||  |||||||||||||||  ||| |||||| | ||||||  |||||||||   ||||||| ||||||| |||||     
T  14419137 atcatttggtcccttaacttatttttaattttcactttggtcccttaactataaaatgtctcaaactggtcccatg--tcttttgccgtttaccgtttta 14419040  T
Q  420 gtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    |||||||| |||||||||||||||||||| | ||||||| || |||||||||  || |||||||||||||||    
T  14419039 gtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagacctt 14418968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 309 - 432
Target Start/End: Complemental strand, 40926642 - 40926518
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||||||| |||| |||||||| |||||| ||||||| |||||| || |  ||    
T  40926642 ttggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcctataaattttctaccg 40926543  T
Q  408 tttactgttttggtcctctctgtta 432  Q
    ||||| |||||||||||||| ||||    
T  40926542 tttaccgttttggtcctctccgtta 40926518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 312 - 438
Target Start/End: Complemental strand, 4858464 - 4858337
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttt 410  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||||| ||| |||| |||||| | |||||| ||||||||||||||||| ||| ||||    
T  4858464 gcttaatacatcatttggtcccttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtcccataaatcttctgttgttt 4858365  T
Q  411 actgttttggtcctctctgttagttttt 438  Q
    ||| ||||  |||||||| |||||||||    
T  4858364 actattttaatcctctctattagttttt 4858337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 311 - 432
Target Start/End: Complemental strand, 46675055 - 46674933
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||| ||||||||  ||||||||||||||| |||| |||  ||| |||||||| |||| ||| |||||||||||||||||| ||||    
T  46675055 ggcttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcgatttggtcccataaatcttttgccgtt 46674956  T
Q  410 tactgttttggtcctctctgtta 432  Q
    |||| ||||||||||||| ||||    
T  46674955 tactattttggtcctctccgtta 46674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 33458305 - 33458430
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaattggtcccataaatcttttgtcgttt 410  Q
    |||||||||||||||||||||| ||||  ||||||||||||||| ||||||||| ||| |||||||| |||||||| ||||||||| |||| |  |||||    
T  33458305 ggcttaatacatcatttggtcctttaacttatttttggttttcattttggtcctttaactataaagtgtctcaattagtcccataagtcttcttccgttt 33458404  T
Q  411 actgttttggtcctctctgttagttt 436  Q
    |||  | |||||||||| ||||||||    
T  33458405 actaatgtggtcctctccgttagttt 33458430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 13446779 - 13446651
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||||||| |||||  |||||||||||||||||||||| ||  || |||| ||| |||||| ||||||||||||||||| || ||||    
T  13446779 ggcttaatacatcatttggtcacttaacttatttttggttttcactttggttcttcaactatatagtgtctcaatttggtcccataaatcttctgccgtt 13446680  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    || | | ||||||||||| ||||||||||    
T  13446679 tattatattggtcctctccgttagttttt 13446651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 43936261 - 43936133
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||| ||  |||||||||||||  ||||||||| ||||| ||||||||||||| |||||||| ||| || |||||| ||||| |||| |||||||    
T  43936261 ggcttaatatatagtttggtcccttaacttatttttggatttcattttggtcctctaactataaagtttcttaatttggtctcataattcttctgtcgtt 43936162  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||| ||||||||||||| ||||||||||    
T  43936161 tactattttggtcctctccgttagttttt 43936133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 309 - 422
Target Start/End: Original strand, 25153651 - 25153765
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    |||||||||||||||||||||||||||||  |||||| | |||||| |||||||| |||| |||||||| |||||| ||||||||||||||||| |  ||    
T  25153651 ttggcttaatacatcatttggtcccttaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttcttccg 25153750  T
Q  408 tttactgttttggtc 422  Q
    ||||| |||||||||    
T  25153751 tttaccgttttggtc 25153765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 30222641 - 30222767
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||| ||||| ||||||||| ||||| |||||||| |||||||||||||||||||| |||||||| ||  |||| |||||||    
T  30222641 ggcttaatacatgctttggtcctttaatttatttttggatttcattttggtcccctaattataaagtatctcaatttggtcccttatgtcttctgtcgtt 30222740  T
Q  410 tactgttttggtcctctctgttagttt 436  Q
      || ||||||||||||| ||||||||    
T  30222741 acctcttttggtcctctccgttagttt 30222767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 308 - 432
Target Start/End: Original strand, 22744738 - 22744863
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||| ||| |||| |||| |||||||| | |||| ||||||| ||||||||| || |    
T  22744738 tttggcttaatacatcatttggtcccttaacttatttttgattttcaatttagtcccctaactataaagtgtttcaatttggtcctataaatcttatgcc 22744837  T
Q  407 gtttactgttttggtcctctctgtta 432  Q
    ||||||| |||||||| |||| ||||    
T  22744838 gtttactattttggtcttctccgtta 22744863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 310 - 458
Target Start/End: Complemental strand, 46458835 - 46458686
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    |||||||||||||| |||||||||||||   ||||||| |||||| ||||||||  ||| |||||||| |||||| ||||||||||||||||| |  |||    
T  46458835 tggcttaatacatcgtttggtcccttaagtaatttttgattttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttcttccgt 46458736  T
Q  409 ttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    ||||  ||||||||||||| ||| ||||||||| | |||| | |||||||    
T  46458735 ttaccattttggtcctctccgtttgtttttaaccttaaatgtctaaggtg 46458686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 14107827 - 14107955
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc-aattggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||  ||| |||||||| |||| || ||||||| || ||||| |||||||    
T  14107827 ggcttaatacatcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgtt 14107926  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
     || |||||||||||||| ||||||||||    
T  14107927 caccgttttggtcctctccgttagttttt 14107955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 14417784 - 14417912
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc-aattggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||  ||| |||||||| |||| || ||||||| || ||||| |||||||    
T  14417784 ggcttaatacatcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgtt 14417883  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
     || |||||||||||||| ||||||||||    
T  14417884 caccgttttggtcctctccgttagttttt 14417912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 43006380 - 43006504
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||||| |||| ||| |||| |||||| |||||||| ||| |||| || ||||    
T  43006380 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtcccctaagtcttatgccgtt 43006479  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    | || |||||||| |||| ||||||    
T  43006480 tgctattttggtcatctccgttagt 43006504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 43007770 - 43007646
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||| |||||||||||| | ||  |||||||| |||||| ||||||||||||| |||||||| |||||| |||||||||||| |||| |||||||    
T  43007770 ggcttaatatatcatttggtccttcaacttatttttgattttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtt 43007671  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    |||| |||| || ||||| ||||||    
T  43007670 tactattttagttctctccgttagt 43007646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 311 - 441
Target Start/End: Complemental strand, 33459664 - 33459533
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||| ||||| |||  ||||||||||||||| ||||||||||||| |||||||| |||||| |||||||||||| ||||    ||||    
T  33459664 ggcttaatacatcatttagtcccataacttatttttggttttcattttggtcctctaactataaagtgtctcaatttggtcccataagtcttcctccgtt 33459565  T
Q  410 tactgttttggtcctctctgttagtttttaac 441  Q
    ||||  | ||||| | ||||||||||||||||    
T  33459564 tactaatgtggtcttttctgttagtttttaac 33459533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 366 - 448
Target Start/End: Complemental strand, 35315288 - 35315205
Alignment:
Q  366 taattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaat 448  Q
    ||||||| |||||| |||||| |||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  35315288 taattattaagtatgtcaatttggtcccataagtcttctgtcgtttactgttttagtcctctctgttagtttttaacatcaaat 35315205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 313 - 438
Target Start/End: Complemental strand, 38408393 - 38408267
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc-aattggtcccataaatcttttgtcgttta 411  Q
    ||||||| |||||||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||| |||||||||| ||  |||| || ||||      
T  38408393 cttaatatatcatttggtcccttaatttatttttgattttcactttggtcctctaactataaagtgtctcaaattggtcccttatgtcttctgccgttat 38408294  T
Q  412 ctgttttggtcctctctgttagttttt 438  Q
    || |||||||||||   ||||||||||    
T  38408293 ctattttggtcctcaaagttagttttt 38408267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 47163162 - 47163276
Alignment:
Q  325 tttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcc 423  Q
    |||| ||||||||| ||||||||| ||| | ||||||||||||| ||||||||  || |||| |||||||||||||||||  |||||||| |||||||||    
T  47163162 tttgctcccttaatttatttttggattttattttggtcctctaactataaagtgccttaatttggtcccataaatctttttccgtttactattttggtcc 47163261  T
Q  424 tctctgttagttttt 438  Q
    |||| ||||||||||    
T  47163262 tctccgttagttttt 47163276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 314 - 434
Target Start/End: Complemental strand, 22746438 - 22746317
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttac 412  Q
    ||||||||| ||||||||| ||||  ||||||| ||||||| ||| |||| |||| |||||||| |||||||| ||||||||||||||| || |||||||    
T  22746438 ttaatacattatttggtcctttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttac 22746339  T
Q  413 tgttttggtcctctctgttagt 434  Q
    | ||||| ||||||| ||||||    
T  22746338 tattttgatcctctccgttagt 22746317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 43931987 - 43931859
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||| ||||||| |||||||  |||||||| ||||||||||| ||| ||   | |||| ||||||||||||| ||| |||| ||    
T  43931987 ggcttaatacatcatttggttccttaatttattttttattttcactctggtcctctaactattaaacgtatcaatttggtcccataaaccttctgtcatt 43931888  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||| ||||||||| ||| ||||||||||    
T  43931887 tactattttggtcccctccgttagttttt 43931859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 458
Target Start/End: Complemental strand, 27899290 - 27899187
Alignment:
Q  356 tttggtcctctaattataaagtatctcaattgg-tcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaa 454  Q
    ||||||||| ||| |||||| |||||||||| | ||||||||||||||||||||||||| |||||||| | || ||||||||||||| | |||||| |||    
T  27899290 tttggtcctttaactataaaatatctcaatttgatcccataaatcttttgtcgtttactattttggtcttatccgttagtttttaaccttaaatatctaa 27899191  T
Q  455 ggtg 458  Q
    ||||    
T  27899190 ggtg 27899187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 330 - 438
Target Start/End: Original strand, 14206687 - 14206796
Alignment:
Q  330 tcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactgttttggtcctctct 428  Q
    ||||||||| |||||||||||||||||||||||  |||| |||||| | | |||| ||||||| ||||||||| ||||||||||| ||||| || ||||     
T  14206687 tcccttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctcc 14206786  T
Q  429 gttagttttt 438  Q
    ||||||||||    
T  14206787 gttagttttt 14206796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 330 - 438
Target Start/End: Original strand, 14215377 - 14215486
Alignment:
Q  330 tcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactgttttggtcctctct 428  Q
    ||||||||| |||||||||||||||||||||||  |||| |||||| | | |||| ||||||| ||||||||| ||||||||||| ||||| || ||||     
T  14215377 tcccttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctcc 14215476  T
Q  429 gttagttttt 438  Q
    ||||||||||    
T  14215477 gttagttttt 14215486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 22061916 - 22061792
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||| |||||||||  ||||||  ||||||| |||||||| |||| ||||||   |||||| ||||||||||||||||| || ||||    
T  22061916 ggcttaatacatcattttgtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtcccataaatcttatgccgtt 22061817  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    |||| |||| ||| |||| ||||||    
T  22061816 tactattttagtcttctccgttagt 22061792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 308 - 434
Target Start/End: Original strand, 22060455 - 22060582
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    |||||||||||| ||||||||||| |||||  ||||||  ||||| | ||||||||||||| |||||||| |||||| ||||| ||| || |||| || |    
T  22060455 tttggcttaatatatcatttggtcacttaacttattttgtgtttttaatttggtcctctaactataaagtgtctcaatttggttccacaagtcttatgcc 22060554  T
Q  407 gtttactgttttggtcctctctgttagt 434  Q
    ||||||| |||||||| |||| ||||||    
T  22060555 gtttactattttggtcatctccgttagt 22060582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 329 - 434
Target Start/End: Complemental strand, 7148161 - 7148055
Alignment:
Q  329 gtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcctctc 427  Q
    |||||||||  ||||||  ||||||| ||||||| ||||| |||||||| | |||||| |||||| |||||||| ||||||||||||||||||| |||||    
T  7148161 gtcccttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtcccttaaatcttatgtcgtttactgttttggttctctc 7148062  T
Q  428 tgttagt 434  Q
     ||||||    
T  7148061 cgttagt 7148055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 43935194 - 43935288
Alignment:
Q  325 tttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactgtttt 418  Q
    |||||||||||||  ||||||||| ||||| ||||||||||||| |||||||| |||||| |||||| |||||||||| || |||||||| ||||    
T  43935194 tttggtcccttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttggtctcataaatcttctgccgtttactatttt 43935288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 539 - 596
Target Start/End: Original strand, 4167675 - 4167732
Alignment:
Q  539 ttgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  4167675 ttgttggatgatgtagggtctgttgtattttattgtaaaccaccgacacctaatattt 4167732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 312 - 436
Target Start/End: Complemental strand, 41618619 - 41618494
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttt 410  Q
    |||||||||||  |||||||||||||  ||||||||| ||||| |||||||| ||||||||||||| ||| || |||||||  ||  |||| |||||||     
T  41618619 gcttaatacatgctttggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctaaatttggtccattatgtcttctgtcgtta 41618520  T
Q  411 actgttttggtcctctctgttagttt 436  Q
     || ||||||||||||| ||||||||    
T  41618519 cctcttttggtcctctccgttagttt 41618494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 314 - 427
Target Start/End: Original strand, 48671076 - 48671189
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaattggtcccataaatcttttgtcgtttact 413  Q
    |||||||||||||||||| |||||| ||||||||||||| | |||| ||   ||| ||||||||||||||||| |  ||||||||||| || ||||||||    
T  48671076 ttaatacatcatttggtctcttaatttatttttggtttttaatttgatctcttaactataaagtatctcaatttgatccataaatcttatgccgtttact 48671175  T
Q  414 gttttggtcctctc 427  Q
     ||| ||| |||||    
T  48671176 atttcggttctctc 48671189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 48672896 - 48672772
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||| |||||||| |||||| ||||||| ||||| | |||||| |  | ||| |||||| |||||| |||||||||||||||   |||||||    
T  48672896 ggcttaatacattatttggtctcttaatttattttttgtttttaatttggttccattattgtaaagtgtctcaatttggtcccataaatcgcgtgtcgtt 48672797  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    |||| |||| |||||||| ||||||    
T  48672796 tactattttagtcctctccgttagt 48672772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 424
Target Start/End: Complemental strand, 36703072 - 36702957
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgta-tttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    |||||||||||||||||||||||||||  || ||||||| ||||| ||| |||| |||| | |||| | |||||| |||||||||||||| || || |||    
T  36703072 ggcttaatacatcatttggtcccttaacttattttttggatttcattttagtcccctaaatttaaactgtctcaatttggtcccataaatattctgccgt 36702973  T
Q  409 ttactgttttggtcct 424  Q
    ||||| ||||||||||    
T  36702972 ttactattttggtcct 36702957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 401
Target Start/End: Original strand, 46457065 - 46457156
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatctt 401  Q
    ||||||||||||| |||||| ||||||  ||||||||||||||| |||| |||  ||| |||||||| |||||| |||||||||||||||||    
T  46457065 ggcttaatacatcgtttggttccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttggtcccataaatctt 46457156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 313 - 398
Target Start/End: Complemental strand, 18802508 - 18802422
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaat 398  Q
    |||||||||||||||||||||||||  ||||||| ||||||| |||| ||| |||| |||||||| |||||| || |||||||||||    
T  18802508 cttaatacatcatttggtcccttaacttattttttgttttcattttgatcccctaactataaagtgtctcaatttagtcccataaat 18802422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 311 - 396
Target Start/End: Original strand, 28325068 - 28325153
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataa 396  Q
    |||||||||||||||||||||| ||||  ||||||||||||| | |||||||| |||| | ||||||||||||| ||||||||||||    
T  28325068 ggcttaatacatcatttggtcc-ttaacttatttttggttttaattttggtcccctaactttaaagtatctcaatttggtcccataa 28325153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 313 - 441
Target Start/End: Complemental strand, 34558420 - 34558291
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttta 411  Q
    ||||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| ||||||||||||||| |||||||| ||  ||||||| ||||      
T  34558420 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtcccttatgtcttttgccgttac 34558321  T
Q  412 ctgttttggtcctctctgttagtttttaac 441  Q
    || |||||||||| || ||||  |||||||    
T  34558320 ctcttttggtcctatccgttacattttaac 34558291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 1970808 - 1970896
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaat 398  Q
    ||||||||||||||| ||||| |||||| ||||||||||||| |||||||| |  ||| |||||||| | |||| ||||||||||||||    
T  1970808 ggcttaatacatcatctggtctcttaatttatttttggtttttactttggttccttaactataaagtgtttcaatttggtcccataaat 1970896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 315 - 427
Target Start/End: Original strand, 7146780 - 7146891
Alignment:
Q  315 taatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaattggtcccataaatcttttgtcgtttactg 414  Q
    ||||||||| |||||||||| | | ||||||  ||||||| |||||||| |||| |||||||| | |||||| |  || |||||||| |||| |||||||    
T  7146780 taatacatcgtttggtccctaact-tattttctgttttcaatttggtcccctaactataaagtgtttcaatttggtccttaaatcttatgtcatttactg 7146878  T
Q  415 ttttggtcctctc 427  Q
    |||||||||||||    
T  7146879 ttttggtcctctc 7146891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 18801210 - 18801298
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaat 398  Q
    ||||||||||||  |||||||||||||  ||||||||  ||||| |||||||| |||| |||||||| |||||| ||||||||||||||    
T  18801210 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcccataaat 18801298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 25155054 - 25154982
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||| |||  ||| |||||||| ||||||||    
T  25155054 ttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatt 25154982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 310 - 409
Target Start/End: Original strand, 41616618 - 41616718
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    |||||||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| |||||||| |||||| |||||||| ||  |||||||||||    
T  41616618 tggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgt 41616717  T
Q  409 t 409  Q
    |    
T  41616718 t 41616718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 1885362 - 1885287
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||||||||||||  ||||||||  ||||| ||||||||  |||||||||||||||||||||    
T  1885362 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtatctcaatt 1885287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 537 - 596
Target Start/End: Complemental strand, 14108965 - 14108906
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    ||||||||||||||||||| |||||| ||||||||||||||| ||||||||  |||||||    
T  14108965 gattgttggatcatgtaggatctattatattttattgtaaacaaccaacactaaatattt 14108906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 537 - 596
Target Start/End: Complemental strand, 14418922 - 14418863
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    ||||||||||||||||||| |||||| ||||||||||||||| ||||||||  |||||||    
T  14418922 gattgttggatcatgtaggatctattatattttattgtaaacaaccaacactaaatattt 14418863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 35128281 - 35128230
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcct 364  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  35128281 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcct 35128230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 393 - 487
Target Start/End: Original strand, 4167529 - 4167623
Alignment:
Q  393 ataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccataga 487  Q
    |||| |||| |||||||||||||||| ||| | ||||| | ||||||||||||||| | ||||||| || |||||||||  || |||||||||||    
T  4167529 ataagtcttctgtcgtttactgttttagtcatttctgtcaatttttaacatcaaatttctaaggtgaaccatgtttaaaggtggtccaccataga 4167623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 36673957 - 36673831
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||| || ||| | |||||||| |||| |||||| | |||||| |||||||| ||  |||| |||||||    
T  36673957 ggcttaatacatgctttggtcccttaacttattttcggattttattttggtcccctaactataaaatgtctcaatttggtcccttatgtcttctgtcgtt 36673858  T
Q  410 tactgttttggtcctctctgttagttt 436  Q
      || ||||||||||||| ||||||||    
T  36673857 acctcttttggtcctctcagttagttt 36673831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 311 - 432
Target Start/End: Original strand, 41126234 - 41126356
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  ||||||  | ||||| |||||||| |||| |||||||| |||||| |||||||| ||  |||| |||||||    
T  41126234 ggcttaatacatgctttggtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 41126333  T
Q  410 tactgttttggtcctctctgtta 432  Q
      || ||||||||||||| ||||    
T  41126334 acctcttttggtcctctccgtta 41126356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 384
Target Start/End: Complemental strand, 44114776 - 44114704
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa 384  Q
    |||||||||||||||||||||||||||  ||||||| ||||||| |||||||| || | |||||| ||||||||    
T  44114776 ggcttaatacatcatttggtcccttaacttatttttagttttcattttggtcccct-actataaaatatctcaa 44114704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 424
Target Start/End: Original strand, 7345907 - 7346023
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    ||||||||||||||  |||||||||||||  ||||||||| ||||| ||||||||  ||| |||||| | ||| || |||||||| ||  ||||||||||    
T  7345907 ttggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcccataaatataaactgtcttaatttggtcccttatttcttttgtcg 7346006  T
Q  408 tttactgttttggtcct 424  Q
    ||  || ||||||||||    
T  7346007 ttacctcttttggtcct 7346023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 7347341 - 7347213
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  || |||| | ||| | |||||| |  |||||||||||| |||||| ||||||| ||||||||| |||||||    
T  7347341 ggcttaatacatgctttggtcccttaacttaattttagattttattttggttccataattataaagtgtctcaatttggtcctataaatcttatgtcgtt 7347242  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||  ||||  ||||||| ||||| ||||    
T  7347241 taccattttaatcctctccgttagatttt 7347213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 28326510 - 28326383
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||| ||||| ||||||||| ||||||||||||| | |||||||  || | |||||||| |||||| ||||| | |||| ||||    ||||    
T  28326510 ggcttaatacattatttgatcccttaatttatttttggtttt-attttggtctcctgactataaagtgtctcaatttggttctataagtcttcctccgtt 28326412  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||| || |||||||||| ||||||||||    
T  28326411 tactattgtggtcctctccgttagttttt 28326383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 314 - 441
Target Start/End: Original strand, 38001502 - 38001630
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    |||||||||  |||||||||||||  |||||| |  ||||| ||||||||||||| |||||||| | |||| |||||||| ||  ||||||||||||  |    
T  38001502 ttaatacatgctttggtcccttaacttattttcgaatttcattttggtcctctaactataaagtgtttcaatttggtcccttatgtcttttgtcgttatc 38001601  T
Q  413 tgttttggtcctctctgttagtttttaac 441  Q
    | |||||||| | |||||||  |||||||    
T  38001602 tcttttggtcatatctgttacattttaac 38001630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 46673514 - 46673601
Alignment:
Q  340 tatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactgttttggtcctctc 427  Q
    ||||||||||||||| |||||||| ||||  ||||||| | |||| ||||||||||||||||| || |||||||| | |||||||||||    
T  46673514 tatttttggttttcaatttggtcccctaacaataaagtgtttcaatttggtcccataaatcttatg-cgtttactatgttggtcctctc 46673601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 17288333 - 17288250
Alignment:
Q  319 acatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatctt 401  Q
    ||||| |||||||||||||  ||||||| ||||| | |||||||| |||| |||||||| |||||| |||||||||||| ||||    
T  17288333 acatcgtttggtcccttaacttattttttgttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtctt 17288250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 29658744 - 29658677
Alignment:
Q  301 ttttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    |||||| ||||||||||||||||||||||||  ||||  ||||||| ||||||| ||| |||||||||    
T  29658744 ttttatttttggcttaatacatcatttggtcatttaacttatttttagttttcaatttagtcctctaa 29658677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 308 - 422
Target Start/End: Original strand, 34557389 - 34557504
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    |||||||||||||||  |||||| ||||||  |||||| || ||| | |||||||| |||| |||||||| |||||| |||||||| ||  ||||||| |    
T  34557389 tttggcttaatacatgctttggttccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgcc 34557488  T
Q  407 gtttactgttttggtc 422  Q
    ||||| | ||||||||    
T  34557489 gtttattcttttggtc 34557504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 596
Target Start/End: Original strand, 38406239 - 38406298
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    |||||||||||||| ||  ||||||||||||||||||||||||| | ||||| |||||||    
T  38406239 gattgttggatcatttaaagtctattgtattttattgtaaaccatccacaccaaatattt 38406298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 386
Target Start/End: Original strand, 38778964 - 38779047
Alignment:
Q  303 ttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||| |||||||||||||||  |||||||||||||  ||||||||  ||||| |||||||| |||| |||||||| || |||||    
T  38778964 ttatttttggcttaatacatgctttggtcccttaacatatttttgaatttcattttggtcccctaactataaagtgtcacaatt 38779047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 41127292 - 41127217
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||| ||||||||  |||||| || ||||| |||||||| |||| |||||||||||||||||    
T  41127292 ggcttaatacatgctttgatcccttaacttattttcggatttcattttggtcccctaactataaagtatctcaatt 41127217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 398
Target Start/End: Complemental strand, 19848941 - 19848867
Alignment:
Q  325 tttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaat 398  Q
    |||||||||||||  ||||||||| ||||| ||||||||  ||| |||||||| |||||| ||||||||||||||    
T  19848941 tttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataaat 19848867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 396
Target Start/End: Original strand, 33228842 - 33228928
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataa 396  Q
    ||||||||||||  |||||||||||||  ||||||||  ||||| ||||||||  ||||| |||| |||||||| ||||||||||||    
T  33228842 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaattttaaactatctcaatttggtcccataa 33228928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 386
Target Start/End: Complemental strand, 33229657 - 33229579
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||||||||  |||||| ||||||| ||||||||  ||||| ||||||||  ||||| |||| ||||||||||    
T  33229657 tttggcttaatacatgctttggttccttaatttatttttgaatttcattttggtcccttaattttaaactatctcaatt 33229579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 419
Target Start/End: Original strand, 36702771 - 36702881
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    |||||||||||||  |||||||||||||  ||||||| | ||||| ||||||||  ||| | |||| | |||||| |||||||||||||| || || |||    
T  36702771 tggcttaatacatgctttggtcccttaacttatttttagatttcattttggtcccttaactttaaactgtctcaatttggtcccataaatattctgccgt 36702870  T
Q  409 ttactgttttg 419  Q
    ||||| |||||    
T  36702871 ttactattttg 36702881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 574
Target Start/End: Original strand, 18801437 - 18801474
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgt 574  Q
    |||||||||||||||||| |||||||||||||||||||    
T  18801437 gattgttggatcatgtagagtctattgtattttattgt 18801474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 485
Target Start/End: Complemental strand, 24495066 - 24494997
Alignment:
Q  416 tttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccata 485  Q
    |||||||||||| |||||||||||||||||||| | ||| ||| || || ||||||| || |||||||||    
T  24495066 tttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaaagtggtccaccata 24494997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 32141764 - 32141813
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtc 362  Q
    |||||||||||||||| ||||||||| ||||||||||||| | |||||||    
T  32141764 cttaatacatcatttgatcccttaatttatttttggtttttaatttggtc 32141813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 342 - 422
Target Start/End: Original strand, 35127836 - 35127917
Alignment:
Q  342 tttttggttttcactttggtcctctaattataaagtatctcaattg-gtcccataaatcttttgtcgtttactgttttggtc 422  Q
    ||||||||||| | |||||| |||||| |||||| | ||||||||  |||||||||||||| || |||||||| ||||||||    
T  35127836 tttttggttttaaatttggttctctaactataaaatgtctcaattttgtcccataaatcttatgccgtttactattttggtc 35127917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 41516468 - 41516379
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataa 396  Q
    ||||| |||||| ||||||||||| |||||  ||||||| ||||| | |||||||| |||| |||||||| ||| || ||||||||||||    
T  41516468 tttggtttaatatatcatttggtctcttaacttattttttgttttaattttggtcccctaactataaagtgtcttaatttggtcccataa 41516379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 313 - 436
Target Start/End: Complemental strand, 30224095 - 30223971
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttta 411  Q
    ||||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| |||||| | |||||| |||||||| ||  |||| || ||||      
T  30224095 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaattgtctcaatttggtcccttatgtcttctgccgttac 30223996  T
Q  412 ctgttttggtcctctctgttagttt 436  Q
     | ||||||||||||| ||||||||    
T  30223995 atcttttggtcctctccgttagttt 30223971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 35480203 - 35480277
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| |||||||| ||||||||    
T  35480203 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcc-ctaactataaagtgtctcaatt 35480277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 401
Target Start/End: Original strand, 41514993 - 41515082
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatctt 401  Q
    ||||||||| |||||||| ||||||||| ||||||||||||| | |||||| | |||| |||||||| | |||| |||||||||||| ||||    
T  41514993 ggcttaatatatcatttg-tcccttaatttatttttggttttaattttggttc-ctaactataaagtgtttcaatttggtcccataagtctt 41515082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 427
Target Start/End: Complemental strand, 35128237 - 35128195
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctc 427  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||    
T  35128237 ttggtcctataaatcttatgtcgtttactattttggtcctctc 35128195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 570
Target Start/End: Complemental strand, 19848728 - 19848695
Alignment:
Q  537 gattgttggatcatgtagggtctattgtatttta 570  Q
    |||||||||||||||||| |||||||||||||||    
T  19848728 gattgttggatcatgtagagtctattgtatttta 19848695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 441
Target Start/End: Original strand, 24871984 - 24872116
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc-aattggtcccataaatcttttgtcg 407  Q
    ||||||||||||||| ||| ||| |||||  | |||||  |||||| |||||||| |||| |||||| |||||| | |||||| ||||| ||||||  ||    
T  24871984 ttggcttaatacatcgttttgtcacttaacttttttttttttttcattttggtccactaactataaa-tatctctatttggtctcataagtctttttccg 24872082  T
Q  408 tttactgttttggtcctctctgttagtttttaac 441  Q
    |||||  ||||| |||| || ||| |||||||||    
T  24872083 tttaccattttgatcctttccgtttgtttttaac 24872116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 45089485 - 45089541
Alignment:
Q  329 gtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||  ||||||||||||||| ||||||||||| | |||||||| ||||||||    
T  45089485 gtcccttaacttatttttggttttcattttggtcctct-actataaagtgtctcaatt 45089541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 386
Target Start/End: Complemental strand, 48755667 - 48755594
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||  |||||||||||||  ||||||||  ||||| ||||||||| ||| |||||| | ||||||||    
T  48755667 cttaatacatgctttggtcccttaacttatttttgaatttcattttggtcctataactataaaatgtctcaatt 48755594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 18670624 - 18670572
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcc 363  Q
    ||||||||||||| |||||||||||||  ||||||||| ||| | ||||||||    
T  18670624 ggcttaatacatcctttggtcccttaacttatttttggattttattttggtcc 18670572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 21171604 - 21171532
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||  |||||||||||||  ||||||||| ||||| |||||||| |||| | |||| | ||||||||    
T  21171604 ttaatacatgctttggtcccttaacttatttttggatttcaatttggtcccctaactttaaattgtctcaatt 21171532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 308 - 443
Target Start/End: Original strand, 23177665 - 23177802
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggt-cctctaattataaagtatctcaa-ttggtcccataaatcttttgt 405  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || |||| |||||||| |||||| ||||||||||||||||| ||     
T  23177665 tttggcttaatacatcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgc 23177764  T
Q  406 cgtttactgttttggtcctctctgttagtttttaacat 443  Q
    |||||||  ||||||||||||| |||||||||||||||    
T  23177765 cgtttaccattttggtcctctccgttagtttttaacat 23177802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 308 - 443
Target Start/End: Original strand, 23588922 - 23589059
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggt-cctctaattataaagtatctcaa-ttggtcccataaatcttttgt 405  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || |||| |||||||| |||||| ||||||||||||||||| ||     
T  23588922 tttggcttaatacatcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgc 23589021  T
Q  406 cgtttactgttttggtcctctctgttagtttttaacat 443  Q
    |||||||  ||||||||||||| |||||||||||||||    
T  23589022 cgtttaccattttggtcctctccgttagtttttaacat 23589059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 310 - 489
Target Start/End: Original strand, 12852880 - 12853060
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgt 408  Q
    |||||||||||||  |||||||||||||  || |||||| ||||| |||||||| |||| |||||||| |||||||| ||||||||||||||| | ||||    
T  12852880 tggcttaatacatgctttggtcccttaacttacttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttctatcgt 12852979  T
Q  409 ttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacc 489  Q
    ||||| |||||||| |||| ||||| ||||||||||||| || ||||||| || || ||||||  || | |||||||||||    
T  12852980 ttactattttggtcatctccgttagattttaacatcaaaaatctaaggtgaaccatatttaaaggtggttcaccatagacc 12853060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 308 - 434
Target Start/End: Complemental strand, 42029082 - 42028955
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc-aattggtcccataaatcttttgtc 406  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| |||||||| |||| | |||||||||||| |||| ||||    
T  42029082 tttggcttaatacatcatttggtcccttaacgtatttttggttttcattttggtcatctaactataaagtgtctcgatttggtcccataattcttctgtc 42028983  T
Q  407 gtttactgttttggtcctctctgttagt 434  Q
    | ||||| |||||||| |||| ||||||    
T  42028982 gcttactattttggtcttctccgttagt 42028955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 311 - 491
Target Start/End: Complemental strand, 29424733 - 29424552
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  ||||||||||||| || ||||||| |||| |||||||| | |||||| |||||| | ||| || || ||||    
T  29424733 ggcttaatacattgtttggtcccttaacttatttttggtttttacattggtcccctaactataaagtgtttcaatttggtcccttgaatattctgccgtt 29424634  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    || |||||||||||||||||||||||  ||||||||||| | |||| || || |||||||||  || |||| ||||||||||    
T  29424633 tattgttttggtcctctctgttagttactaacatcaaatgtctaagatgaaccatgtttaaaggtggtccatcatagacctt 29424552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 311 - 457
Target Start/End: Original strand, 4829460 - 4829607
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaattgg-tcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||| | ||||||  ||||||| ||||||||||| ||||  ||| |||||| | |||||||| | || |||||||||| |||||||    
T  4829460 ggcttaatacatcatttgattccttaacttatttttcgttttcactttagtcccttaactataaaatgtctcaatttgatctcataaatcttatgtcgtt 4829559  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggt 457  Q
    |||| |||||||||||||||||||| |||||| | |||||| ||||||    
T  4829560 tactattttggtcctctctgttagtgtttaaccttaaatatctaaggt 4829607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 6706921 - 6707049
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  ||||||||| ||||| |||||||| |||| |||||||| |||||| ||||| ||||||||||| |  ||||    
T  6706921 ggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggttccataaatcttcttccgtt 6707020  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||| ||||||||| ||| ||||||||||    
T  6707021 tactattttggtcccctccgttagttttt 6707049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 307 - 438
Target Start/End: Original strand, 37867747 - 37867879
Alignment:
Q  307 gtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgt 405  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| |||| ||| |||| |||||||| |||||| ||||||||| |||| || | |    
T  37867747 gtttggcttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccacaaattttcttt 37867846  T
Q  406 cgtttactgttttggtcctctctgttagttttt 438  Q
    ||||||   |||||||| | |||||| ||||||    
T  37867847 cgtttatcattttggtcatgtctgtttgttttt 37867879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 312 - 438
Target Start/End: Complemental strand, 23179002 - 23178875
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagt-atctcaattggtcccataaatcttttgtcgttt 410  Q
    ||||||| ||||||||||||||||||  ||||||| |||||||||||||||| |||| |||||| |  | | |||||||||||||||||||  |||||||    
T  23179002 gcttaatccatcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgttt 23178903  T
Q  411 actgttttggtcctctctgttagttttt 438  Q
    | | |||||||| |||| ||||||||||    
T  23178902 attattttggtcatctccgttagttttt 23178875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 312 - 438
Target Start/End: Complemental strand, 23590259 - 23590132
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagt-atctcaattggtcccataaatcttttgtcgttt 410  Q
    ||||||| ||||||||||||||||||  ||||||| |||||||||||||||| |||| |||||| |  | | |||||||||||||||||||  |||||||    
T  23590259 gcttaatccatcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgttt 23590160  T
Q  411 actgttttggtcctctctgttagttttt 438  Q
    | | |||||||| |||| ||||||||||    
T  23590159 attattttggtcatctccgttagttttt 23590132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 309 - 434
Target Start/End: Original strand, 2581796 - 2581922
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcg 407  Q
    |||||| |||||||||||||||||  |||  ||||||||||||||| |||| ||| |||| |||||||| |||||| |||||||||||||||||  | ||    
T  2581796 ttggctaaatacatcatttggtcctctaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttacgccg 2581895  T
Q  408 tttactgttttggtcctctctgttagt 434  Q
    |||||| | ||||||||||| ||||||    
T  2581896 tttactatcttggtcctctccgttagt 2581922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 300 - 396
Target Start/End: Complemental strand, 7038464 - 7038367
Alignment:
Q  300 tttttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataa 396  Q
    ||||||| || |||||||||||||||||||||||||||  ||||||||| ||||| ||||||||  ||| |||||||| |||||| ||||||||||||    
T  7038464 tttttatattaggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 7038367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 458
Target Start/End: Original strand, 7036961 - 7037109
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||| ||||  ||||||||| ||||||||| ||||  ||| |||||||| | |||| |||||||||||| |||| || ||||    
T  7036961 ggcttaatacatcatttggtcctttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcccataagtcttctgccgtt 7037060  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    |||  |||||||| | || |||  |||||||| | |||||| |||||||    
T  7037061 taccattttggtcatttccgtttatttttaaccttaaatatctaaggtg 7037109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 42027188 - 42027312
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||| |||||||||||||  |||||||| |||||| ||||||||||||| || ||| | |||||| |||||||||||||| || ||  |||    
T  42027188 ggcttaatacatcgtttggtcccttaacttatttttgattttcattttggtcctctaactacaaaatgtctcaatttggtcccataaattttctgctgtt 42027287  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    ||||  ||||||||| || ||||||    
T  42027288 tactactttggtcctttccgttagt 42027312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 42246586 - 42246714
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  | ||||||||||||| |||| ||| ||||||||||||| | |||| ||| |||||||| ||||||  ||||    
T  42246586 ggcttaatacatgctttggtcccttaacttgtttttggttttcattttgatcccctaattataaagtgtttcaatttgatcccataactcttttaccgtt 42246685  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||| |||||||||| |  ||||||||||    
T  42246686 tactattttggtccttttcgttagttttt 42246714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 458
Target Start/End: Complemental strand, 28109988 - 28109842
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgttta 411  Q
    ||||||| || ||||||||||||||  ||||||| ||||||| |||||||   |||  |||||||||||||||| |||||||||| | || ||| |||||    
T  28109988 cttaatatatgatttggtcccttaacttatttttcgttttcaatttggtctcataacgataaagtatctcaatttggtcccataacttttctgtagttta 28109889  T
Q  412 ctgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    |  ||||||||||||| |||| |||||||| | |||| | |||||||    
T  28109888 ccattttggtcctctccgttattttttaaccttaaatgtctaaggtg 28109842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 314 - 398
Target Start/End: Complemental strand, 10368503 - 10368418
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaat 398  Q
    ||||||||||||||||||||||||| |||||||| |||||| |||| ||| |||| |||||||| |||||| ||| ||||||||||    
T  10368503 ttaatacatcatttggtcccttaatttatttttgattttcaatttgatcccctaactataaagtgtctcaatttgatcccataaat 10368418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 356 - 491
Target Start/End: Complemental strand, 7490271 - 7490135
Alignment:
Q  356 tttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaa 454  Q
    ||||||||| |||||||||| | |||||||| ||||||||||||||||| | ||||||| |||||||| | || ||||||||||||| | |||| | |||    
T  7490271 tttggtcctttaattataaaatgtctcaatttggtcccataaatcttttattgtttactattttggtcttatccgttagtttttaaccttaaatgtctaa 7490172  T
Q  455 ggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    |||| || |  |||| || ||| |||||||| |||||    
T  7490171 ggtgaacaaactttataagtgacccaccataaacctt 7490135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 311 - 458
Target Start/End: Complemental strand, 37869161 - 37869013
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||| ||  |||||||||||||  |||||||| |||||| ||||||||  ||| |||||||| |||||| || ||| ||||| |||| |||||||    
T  37869161 ggcttaatatattgtttggtcccttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttagtctcataagtcttctgtcgtt 37869062  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    |||  |||||||| |||| ||| ||||||||| | |||| | |||||||    
T  37869061 tacctttttggtcttctccgtttgtttttaaccttaaatgtctaaggtg 37869013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 313 - 384
Target Start/End: Complemental strand, 4701606 - 4701535
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa 384  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||||| ||| |||| |||||||| ||||||    
T  4701606 cttaatatatcatttggtcccttaatttatttttgattttcactttgatcccctaactataaagtgtctcaa 4701535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 14509204 - 14509335
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||| |  | ||||||||  ||||||   || ||||||||||||  ||| |||||||| | | |||| ||||||||||||||| |||||||    
T  14509204 ggcttaatacatcctccgatcccttaacttattttattttctcactttggtcccttaactataaagtgttttaattcggtcccataaatcttctgtcgtt 14509303  T
Q  410 tactgttttggtcctctctgttagtttttaac 441  Q
    |||| ||||||||||||| |||| ||||||||    
T  14509304 tactattttggtcctctccgttaatttttaac 14509335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 538 - 596
Target Start/End: Complemental strand, 21010391 - 21010333
Alignment:
Q  538 attgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    |||||||||||| |||||||||||||||||||||| | |||||| ||||||||||||||    
T  21010391 attgttggatcaggtagggtctattgtattttattatgaaccactaacacctaatattt 21010333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 313 - 458
Target Start/End: Original strand, 35799509 - 35799655
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttta 411  Q
    |||||||||||||||  ||||||||  ||||||||||||||| ||| |||| |||| |||||||| |||||| |||||| ||||| | || |  ||||||    
T  35799509 cttaatacatcatttcatcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtctcataacttttcttccgttta 35799608  T
Q  412 ctgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    |   |||||||||||| ||||| ||||||| | |||| | |||||||    
T  35799609 cctctttggtcctctccgttagcttttaaccttaaatgtctaaggtg 35799655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 309 - 401
Target Start/End: Complemental strand, 12854227 - 12854134
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatctt 401  Q
    ||||||||||||||  |||||||||||||  ||||||| | ||||| ||||||||  ||| |||||||| |||||| |||||||||||||||||    
T  12854227 ttggcttaatacatgctttggtcccttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtcccataaatctt 12854134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 2583667 - 2583543
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||| ||||||||  |||  ||||||||||||| | ||| |||| |||| |||||||| |||||| |||||| ||||||||||     |||    
T  2583667 ggcttaatacatcgtttggtcctctaacttatttttggtttttaattttgtcccctaactataaagtgtctcaatttggtctcataaatcttacactgtt 2583568  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    |||| | ||||||||||||||||||    
T  2583567 tactatcttggtcctctctgttagt 2583543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 3254851 - 3254982
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| |||||| | ||||||||| ||| |||||| |||||||| ||  ||||||||||||    
T  3254851 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggttccctaattatagagtgtctcaatttggtcccttatgtcttttgtcgtt 3254950  T
Q  410 tactgttttggtcctctctgttagtttttaac 441  Q
      || |||||||||| || ||||  |||||||    
T  3254951 acctcttttggtcctatccgttacattttaac 3254982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 438
Target Start/End: Complemental strand, 6209156 - 6209058
Alignment:
Q  340 tatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcctctctgttagttttt 438  Q
    ||||||||| ||||| ||||||| ||||| |||||||| ||| |||| |||||||||| ||||| |||||||||| |||||||| |||  ||||||||||    
T  6209156 tatttttggatttcattttggtcatctaactataaagtgtcttaatttggtcccataattcttt-gtcgtttactattttggtcttcttcgttagttttt 6209058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 308 - 386
Target Start/End: Complemental strand, 14573932 - 14573854
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||||||||  |||||||||||||  ||||||||| ||||| |||||||| |||| |||||||| || |||||    
T  14573932 tttggcttaatacatgctttggtcccttaacatatttttggatttcattttggtcccctaactataaagtgtcacaatt 14573854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 41312495 - 41312621
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||| ||||  |||||| || ||||| |||| |||||||| ||||||||||||||| |||||| | ||  |||| || ||||    
T  41312495 ggcttaatacatgctttggtccattaacttattttcggatttcattttgttcctctaactataaagtatctcaatttggtctcttatgtcttatgccgtt 41312594  T
Q  410 tactgttttggtcctctctgttagttt 436  Q
      || ||||||||||||| ||||||||    
T  41312595 acctcttttggtcctctccgttagttt 41312621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 394
Target Start/End: Complemental strand, 41796071 - 41795989
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccat 394  Q
    ||||||||||||||| |||||||||  |||||||| |||||| |||| ||| |||| |||||||| |||||| ||||||||||    
T  41796071 cttaatacatcatttagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttggtcccat 41795989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 396
Target Start/End: Complemental strand, 42368436 - 42368343
Alignment:
Q  303 ttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc-aattggtcccataa 396  Q
    |||| ||||||||||||||| ||||||| ||||||  ||||||||| ||||| |||||||| |||| |||||||| |||| | ||||||||||||    
T  42368436 ttatttttggcttaatacatgatttggt-ccttaacttatttttggatttcattttggtcccctaactataaagtgtctcgatttggtcccataa 42368343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 436
Target Start/End: Original strand, 2305536 - 2305661
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttt 410  Q
    |||||||||||  |||| ||||||||  ||||||||| ||||| |||| ||| |||| |||||||| |||||| |||||||| ||  |||| || ||||     
T  2305536 gcttaatacatgctttgatcccttaacttatttttggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgtta 2305635  T
Q  411 actgttttggtcctctctgttagttt 436  Q
     || ||||||||||||| ||||||||    
T  2305636 cctcttttggtcctctccgttagttt 2305661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 314 - 434
Target Start/End: Original strand, 15650439 - 15650560
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttac 412  Q
    |||||||||| |||| ||||||||  |||||||  || | | |||||||| |||| |||||||| |||||||| |||  | |||||||| ||||||||||    
T  15650439 ttaatacatcgtttgatcccttaacttatttttcattgttaatttggtcccctaactataaagtgtctcaatttggtatcttaaatcttatgtcgtttac 15650538  T
Q  413 tgttttggtcctctctgttagt 434  Q
    | |||||||| |||| ||||||    
T  15650539 tattttggtcatctccgttagt 15650560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 11575576 - 11575512
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaa 375  Q
    |||||||||||||||||||||| ||||  ||||||||||||| | |||||||| |||| ||||||    
T  11575576 ggcttaatacatcatttggtccattaacttatttttggttttaattttggtcccctaactataaa 11575512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 308 - 422
Target Start/End: Original strand, 4628874 - 4628989
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtc 406  Q
    |||||||||||| ||  ||| |||||||||  ||||||||| ||| | ||||||||||||  ||||||||||||||| ||| |||||||  ||||||| |    
T  4628874 tttggcttaatatatgctttagtcccttaacttatttttggattttattttggtcctctatatataaagtatctcaatttgatcccatatgtcttttgcc 4628973  T
Q  407 gtttactgttttggtc 422  Q
    |||  || ||||||||    
T  4628974 gttacctcttttggtc 4628989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 5564054 - 5564129
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||||||||||||  ||||||||  ||||| ||||||||  |||||||||||| ||||||||    
T  5564054 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatt 5564129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 5565266 - 5565191
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||||||||||||  ||||||||  ||||| ||||||||  |||||||||||| ||||||||    
T  5565266 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatt 5565191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 596
Target Start/End: Complemental strand, 41296348 - 41296289
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    ||||||| ||||||||||| |||||||||||||| ||| || ||| ||||||||||||||    
T  41296348 gattgttcgatcatgtaggatctattgtattttagtgtgaatcactaacacctaatattt 41296289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 485
Target Start/End: Original strand, 4512206 - 4512276
Alignment:
Q  415 ttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccata 485  Q
    |||||||||||||  ||||||||||||||||||||| ||||||| || || || |||| || |||||||||    
T  4512206 ttttggtcctctccattagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccata 4512276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 485
Target Start/End: Original strand, 14714592 - 14714662
Alignment:
Q  415 ttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccata 485  Q
    ||||||||||||| |||||||||||||||||||| | ||||||| || || ||||||  || |||||||||    
T  14714592 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccata 14714662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 485
Target Start/End: Original strand, 26205114 - 26205183
Alignment:
Q  416 tttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccata 485  Q
    |||||||||||| |||||||||||||||||||| | ||||||| || ||  |||||| || |||||||||    
T  26205114 tttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatacttaaaagtggtccaccata 26205183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 438
Target Start/End: Complemental strand, 40174810 - 40174757
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagttttt 438  Q
    ||||||||||||||||| ||| ||||||| |||||||| |||| ||||||||||    
T  40174810 ttggtcccataaatcttctgttgtttactattttggtcatctccgttagttttt 40174757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 310 - 441
Target Start/End: Complemental strand, 2306782 - 2306651
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    |||||||||||||  |||||||||||||  || |||||| ||||| |||||||| |||| | |||||| |||||| |||||||  ||  |||| || |||    
T  2306782 tggcttaatacatgctttggtcccttaactta-ttttggatttcattttggtcccctaactgtaaagtgtctcaatttggtccattatgtcttctgccgt 2306684  T
Q  409 ttactgttttggtcctctctgttagtttttaac 441  Q
    |  || ||||||||||||| |||||||| ||||    
T  2306683 tacctcttttggtcctctccgttagtttgtaac 2306651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 3665219 - 3665283
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaa 375  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| ||||||||||||| ||||||    
T  3665219 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcctctaactataaa 3665283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 12958412 - 12958499
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaat 398  Q
    ||||||||| |||||||||| | ||||  ||||||||||||| | |||| ||| |||| |||||||| |||||| ||||||||||||||    
T  12958412 ggcttaatatatcatttggttc-ttaacttatttttggtttttaatttgatcccctaactataaagtgtctcaatttggtcccataaat 12958499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 541 - 593
Target Start/End: Original strand, 14714718 - 14714770
Alignment:
Q  541 gttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaata 593  Q
    |||| ||||||||| ||||||||||||||| ||| |||||| |||||||||||    
T  14714718 gttgaatcatgtagagtctattgtattttactgtgaaccactaacacctaata 14714770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 42596552 - 42596612
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    ||||||||||||||||||||||||||||||  |||||| | |||| | |||||||| ||||    
T  42596552 tttggcttaatacatcatttggtcccttaacttattttcgttttttattttggtcccctaa 42596612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 32614380 - 32614511
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||| ||||||||||||||||   ||||||   |||||| |||||||| |||| ||| | || | |||| || || |||||| |||| |||||||    
T  32614380 ggcttaatatatcatttggtcccttagcttattttattttttcattttggtcccctaactatcacgtgtttcaatttagttccataactcttatgtcgtt 32614479  T
Q  410 tactgttttggtcctctctgttagtttttaac 441  Q
    |||  |||| |||||||| ||| |||||||||    
T  32614480 taccattttagtcctctccgtttgtttttaac 32614511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 487
Target Start/End: Complemental strand, 7983741 - 7983639
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccat 484  Q
    ||||||| |||| |||| |  ||||||||||||| ||||| |  || | ||||||||||||||| | ||||||| || |||||||||  || ||||||||    
T  7983741 ttggtcctataagtcttctaccgtttactgttttagtccttttcgtcaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccat 7983642  T
Q  485 aga 487  Q
    |||    
T  7983641 aga 7983639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 363
Target Start/End: Complemental strand, 27657870 - 27657816
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcc 363  Q
    ||||||||||||||  |||||||||||||| ||||||||| ||| | ||||||||    
T  27657870 ttggcttaatacatgctttggtcccttaatttatttttggattttattttggtcc 27657816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 21010514 - 21010481
Alignment:
Q  415 ttttggtcctctctgttagtttttaacatcaaat 448  Q
    ||||||||||||||||||||| ||||||||||||    
T  21010514 ttttggtcctctctgttagttgttaacatcaaat 21010481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 363
Target Start/End: Complemental strand, 21545191 - 21545138
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcc 363  Q
    |||||||||||||  |||||||||||||  ||||||||| ||||| ||||||||    
T  21545191 tggcttaatacatgttttggtcccttaacttatttttggatttcattttggtcc 21545138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 29424506 - 29424462
Alignment:
Q  537 gattgttggatcatgtagggtctattgtattttattgtaaaccacc 582  Q
    ||||||||||||||||| |||||||| || ||||||||||||||||    
T  29424506 gattgttggatcatgtaaggtctatt-taatttattgtaaaccacc 29424462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 374
Target Start/End: Complemental strand, 42249911 - 42249846
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataa 374  Q
    ||||||||||||||  |||||||| ||||  ||||||| ||||||| |||| ||| ||||||||||    
T  42249911 ttggcttaatacatgctttggtcctttaacttattttttgttttcattttgatcccctaattataa 42249846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 386
Target Start/End: Complemental strand, 17179373 - 17179297
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||||||  |||||||||||||  ||||||||  ||||| |||||||| |||| | |||| | ||||||||    
T  17179373 tggcttaatacatgctttggtcccttaacttatttttgaatttcaatttggtcccctaactttaaactgtctcaatt 17179297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 30203001 - 30202929
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||  |||||||||||||  ||||||||| ||||| |||||||| |||| | |||| | ||||||||    
T  30203001 ttaatacatgttttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatt 30202929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 41296485 - 41296437
Alignment:
Q  400 ttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaat 448  Q
    ||||||||||  || ||||||||||||| |||||||||||||| |||||    
T  41296485 ttttgtcgttatctcttttggtcctctccgttagtttttaacaccaaat 41296437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 8e-38; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 311 - 458
Target Start/End: Original strand, 5382937 - 5383085
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||||||||||  |||||||  ||||||||||||| |||||| |||||||||||||||||| ||||||    
T  5382937 ggcttaatacatcatttggtcccttaacttatttttggttttctatttggtctcctaattataaagtgtctcaatttggtcccataaatctttggtcgtt 5383036  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    |||| ||||| ||||||| ||||||||||||| | |||| | |||||||    
T  5383037 tactattttgatcctctccgttagtttttaaccttaaatgtctaaggtg 5383085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 311 - 422
Target Start/End: Original strand, 18677971 - 18678083
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| ||| |||| |||||||| |||||| ||||||||||||||||| |||||||    
T  18677971 ggcttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtcccataaatcttctgtcgtt 18678070  T
Q  410 tactgttttggtc 422  Q
    ||| |||||||||    
T  18678071 taccgttttggtc 18678083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 313 - 438
Target Start/End: Original strand, 1273086 - 1273212
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttta 411  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||| |||||| | |||||| ||||||||||||||||| ||  |||||    
T  1273086 cttaatacatcatttggtcccttaatttatttttggttttcattttggtcctttaactataaaatgtctcaatttggtcccataaatcttctgcagttta 1273185  T
Q  412 ctgttttggtcctctctgttagttttt 438  Q
    |  ||||||||| ||| ||||||||||    
T  1273186 caattttggtcccctccgttagttttt 1273212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 311 - 447
Target Start/End: Complemental strand, 7345511 - 7345374
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||| ||||||||  ||||||||  ||||| ||||||||||||| |||||||| |||||||| |||||||||||| ||||||||||    
T  7345511 ggcttaatacatgttttgatcccttaacttatttttgaatttcattttggtcctctaactataaagtgtctcaatttggtcccataaatattttgtcgtt 7345412  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaa 447  Q
      || |||||||||||| || |||||||||||||||||    
T  7345411 atctcttttggtcctctatgatagtttttaacatcaaa 7345374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 5384467 - 5384339
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||| ||||||| |||||||| |||||| |||| ||| |||| |||||||| |||||| |||||||||||||||||    ||||    
T  5384467 ggcttaatacatcatttggttccttaatttatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttcgtccgtt 5384368  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||| ||||||||||||| ||||||||||    
T  5384367 tactattttggtcctctccgttagttttt 5384339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 311 - 441
Target Start/End: Complemental strand, 19525409 - 19525278
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatct-caattggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||||| |||| |||||||| ||| || |||||| ||||| |||| || ||||    
T  19525409 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctccatttggtcacataagtcttctgccgtt 19525310  T
Q  410 tactgttttggtcctctctgttagtttttaac 441  Q
    |||  ||||||||||||| ||| |||||||||    
T  19525309 taccattttggtcctctccgtttgtttttaac 19525278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 314 - 447
Target Start/End: Original strand, 18693696 - 18693830
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaat-tggtcccataaatcttttgtcgtttac 412  Q
    |||||||||  |||||||||||||  ||||||||  ||| | ||||||||  ||| |||||| | ||||||| |||||||||||||||| |||||||  |    
T  18693696 ttaatacatgttttggtcccttaacttatttttgaattttattttggtcccttaactataaaatgtctcaatctggtcccataaatcttctgtcgttacc 18693795  T
Q  413 tgttttggtcctctctgttagtttttaacatcaaa 447  Q
    | |||||||||||||||||||||||||||||||||    
T  18693796 tcttttggtcctctctgttagtttttaacatcaaa 18693830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 311 - 447
Target Start/End: Original strand, 21387632 - 21387769
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtt 409  Q
    |||||||||||   |||||||||||||  ||||||||  ||||| |||||||| |||| |||||| | |||||||| ||||||||||||||| || ||||    
T  21387632 ggcttaatacaagctttggtcccttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataaatcttctgccgtt 21387731  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaa 447  Q
      || |||||||||| ||||||||||||||||||||||    
T  21387732 acctcttttggtcctgtctgttagtttttaacatcaaa 21387769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 308 - 438
Target Start/End: Original strand, 15613497 - 15613628
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtc 406  Q
    |||| ||||||||||  |||| ||||||||  ||||||||| ||||| ||||||| ||||| |||||||| |||||||| ||||||||||||||| |  |    
T  15613497 tttgacttaatacatgctttgatcccttaacttatttttggatttcattttggtcttctaactataaagtgtctcaatttggtcccataaatcttcttcc 15613596  T
Q  407 gtttactgttttggtcctctctgttagttttt 438  Q
    ||||||| ||||||||||||| |||| |||||    
T  15613597 gtttactattttggtcctctccgttaattttt 15613628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 311 - 448
Target Start/End: Original strand, 42510109 - 42510247
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||   || ||||||||| ||||||   |||||| ||||||||  ||| |||||||| |||||||| ||||||||||||||| || ||||    
T  42510109 ggcttaatacatcccctgatcccttaatttattttattttttcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtt 42510208  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaat 448  Q
    |||| ||||||| ||||| ||||||||||||| ||||||    
T  42510209 tactattttggttctctccgttagtttttaacctcaaat 42510247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 310 - 422
Target Start/End: Complemental strand, 19827262 - 19827149
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    |||||||||||||||||| ||| |||||  ||||||||||||||| ||||||||  |||||||||||| |||||| ||||||||||||||||| |  |||    
T  19827262 tggcttaatacatcatttagtctcttaacttatttttggttttcaatttggtcccataattataaagtgtctcaatttggtcccataaatcttcttccgt 19827163  T
Q  409 ttactgttttggtc 422  Q
    ||||  ||||||||    
T  19827162 ttaccattttggtc 19827149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 42979443 - 42979560
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||| ||||| ||||||| | ||||||||| ||||| ||||||||||||| |||||||| | |||| ||||||| |||| |||| || ||||    
T  42979443 ggcttaatacataatttgatcccttagtttatttttggatttcattttggtcctctaactataaagtgtttcaatttggtccaataattcttctgccgtt 42979542  T
Q  410 tactgttttggtcctctc 427  Q
    |||| |||||||||||||    
T  42979543 tactattttggtcctctc 42979560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 325 - 436
Target Start/End: Complemental strand, 15615067 - 15614955
Alignment:
Q  325 tttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgtttactgttttggtcc 423  Q
    ||||||||||||   ||||||||| ||||| |||||||| |||| |||||||| |||||||| ||| |||||||| || || |||||||| |||||||||    
T  15615067 tttggtcccttatcttatttttggatttcattttggtccgctaactataaagtgtctcaatttggttccataaattttctgccgtttactattttggtcc 15614968  T
Q  424 tctctgttagttt 436  Q
    |||||||||||||    
T  15614967 tctctgttagttt 15614955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 302 - 422
Target Start/End: Original strand, 19523969 - 19524089
Alignment:
Q  302 tttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaattggtcccataaatctt 401  Q
    ||||| |||||||||||| |||||||||||||||||  ||||||||||||||| ||||||||  ||| |||||||| |||||||| |  | |||||| ||    
T  19523969 tttatttttggcttaatatatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtctataaatttt 19524068  T
Q  402 ttgtcgtttactgttttggtc 422  Q
     ||||||||||  ||||||||    
T  19524069 ctgtcgtttaccattttggtc 19524089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 314 - 425
Target Start/End: Complemental strand, 26404328 - 26404216
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    ||||||||||||||| ||||||||| ||||| || |||| | ||||||||| ||| |||||||| |||||| ||| ||||||||||||| |||| |||||    
T  26404328 ttaatacatcatttgatcccttaatttatttatgatttttaatttggtcctttaactataaagtgtctcaatttgatcccataaatcttatgtcatttac 26404229  T
Q  413 tgttttggtcctc 425  Q
    | |||||||||||    
T  26404228 tattttggtcctc 26404216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 311 - 432
Target Start/End: Original strand, 1663182 - 1663304
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||| |||||||||  ||||||||| |||||||||| |||  ||| |||||||| ||| || ||||||| ||||||||| || ||||    
T  1663182 ggcttaatacatcatttagtcccttaacttatttttggatttcactttgatccattaactataaagtgtcttaatttggtcctataaatcttctgccgtt 1663281  T
Q  410 tactgttttggtcctctctgtta 432  Q
    |||| |||||||| |||| ||||    
T  1663282 tactattttggtcttctccgtta 1663304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 311 - 384
Target Start/End: Original strand, 6629726 - 6629799
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa 384  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||| |||||||| ||||||    
T  6629726 ggcttaatacatcatttggtcccttaacttatttgtggttttcactttggtcccctaactataaagtgtctcaa 6629799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 422
Target Start/End: Complemental strand, 12936223 - 12936111
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||| |||||||||  ||||||||||||||| |||||||| |||| |||||||| |||||| ||||||| |||| |||| ||  |||    
T  12936223 ggcttaatacatcatttagtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgctgtt 12936124  T
Q  410 tactgttttggtc 422  Q
    |||  ||||||||    
T  12936123 taccattttggtc 12936111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 311 - 432
Target Start/End: Original strand, 26403302 - 26403424
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||| | |||| ||||  |||||||| |||||| ||||||||  ||| |||||||| |||||| ||| || ||||||| || |||||||    
T  26403302 ggcttaatacatcatatagtcctttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttgatctcataaattttatgtcgtt 26403401  T
Q  410 tactgttttggtcctctctgtta 432  Q
    |||| |||||||| |||||||||    
T  26403402 tactattttggtcttctctgtta 26403424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 314 - 434
Target Start/End: Complemental strand, 10085963 - 10085842
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    ||||||||||||||||||||||||  ||||||||  |||||||||||||   ||| | |||||| | |||| ||||||||||||||||| ||   |||||    
T  10085963 ttaatacatcatttggtcccttaacttatttttgaatttcactttggtctcttaactttaaagtgtttcaatttggtcccataaatcttctgctatttac 10085864  T
Q  413 tgttttggtcctctctgttagt 434  Q
    | ||||||||||||| ||||||    
T  10085863 tattttggtcctctccgttagt 10085842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 313 - 421
Target Start/End: Complemental strand, 27894142 - 27894033
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttta 411  Q
    ||||||||||| ||||||| |||||  ||||||| |||||||||||||||| |||| |||||||| | |||| |||||| ||||||| ||  ||||||||    
T  27894142 cttaatacatcgtttggtcgcttaacttattttttgttttcactttggtcccctaactataaagtgtttcaatttggtctcataaattttccgtcgttta 27894043  T
Q  412 ctgttttggt 421  Q
    || |||||||    
T  27894042 ctattttggt 27894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 311 - 422
Target Start/End: Complemental strand, 12950381 - 12950269
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||| |||||||| |||| |||||||| |||||| ||||||| |||| |||| ||  |||    
T  12950381 ggcttaatacatcatttagtcccttaacttatttatggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgatgtt 12950282  T
Q  410 tactgttttggtc 422  Q
    |||  ||||||||    
T  12950281 taccattttggtc 12950269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 41905170 - 41905234
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaa 375  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||||| |||| ||||||    
T  41905170 ggcttaatacatcatttggtcccttaacttatttttggttttcattttggtcccctaactataaa 41905234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 1273461 - 1273386
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||| ||| |||||||||||||  ||||||||||||||| ||||||||  |||||||||||| ||||||||    
T  1273461 ggcttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccttaattataaagtgtctcaatt 1273386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 15510384 - 15510258
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| |||| ||| |||| |||||||| |||||| |||||||| ||  |||| || ||||    
T  15510384 ggcttaatacatgctttggtcccttaacttattttcggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgtt 15510285  T
Q  410 tactgttttggtcctctctgttagttt 436  Q
      || ||||||||||||||||||||||    
T  15510284 acctcttttggtcctctctgttagttt 15510258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 438
Target Start/End: Original strand, 5975754 - 5975879
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    ||||||||||||||||||| ||||  |||||||  |||| | |||||||| ||||||||||||| |||||| |||||| ||||| ||||     ||||||    
T  5975754 ttaatacatcatttggtcctttaacttattttttattttaattttggtcccctaattataaagtgtctcaatttggtctcataagtcttcctctgtttac 5975853  T
Q  413 tgttttggtcctctctgttagttttt 438  Q
    | || |||| ||||||||||||||||    
T  5975854 tattgtggttctctctgttagttttt 5975879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 539 - 596
Target Start/End: Original strand, 7426865 - 7426922
Alignment:
Q  539 ttgttggatcatgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    ||||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  7426865 ttgttggatgatgtagggtctactgtattttattgtaaactaccatcacctaatattt 7426922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 438
Target Start/End: Complemental strand, 22812505 - 22812380
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaattgg-tcccataaatcttttgtcgtttac 412  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||  ||| |||||| | ||||| || | ||||||||||||| ||  ||||||    
T  22812505 ttaatacatcatttggtcccttaacttattttttattttcattttagtcccttaactataaaatgtctcactttgatcccataaatcttctgcagtttac 22812406  T
Q  413 tgttttggtcctctctgttagttttt 438  Q
    | ||||||||| ||| ||||||||||    
T  22812405 tattttggtcccctccgttagttttt 22812380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 302 - 362
Target Start/End: Original strand, 10084613 - 10084673
Alignment:
Q  302 tttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtc 362  Q
    ||||| || |||||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  10084613 tttattttcggcttaatacatcatttgttcccttaatttatttttggttttcattttggtc 10084673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 436
Target Start/End: Original strand, 4566949 - 4567072
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    |||||||||  |||||||||||||  |||||| || ||||| |||| ||| |||| |||||||| |||||| |||||||| ||  |||| |||||||  |    
T  4566949 ttaatacatgctttggtcccttaacatattttcggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacc 4567048  T
Q  413 tgttttggtcctctctgttagttt 436  Q
    | |||||||| |||||||||||||    
T  4567049 tcttttggtcatctctgttagttt 4567072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 5061023 - 5061098
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||||||||||||  ||||||||| ||||| |||||||| ||||| ||||||| ||||||||    
T  5061023 ggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcccctaatgataaagtgtctcaatt 5061098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 422
Target Start/End: Complemental strand, 38473679 - 38473564
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgta-tttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtc 406  Q
    |||| |||||| || ||||||||| ||||| || ||||| | ||||| ||||||| ||||| | |||||| ||| |||| ||||||||||||||| ||||    
T  38473679 ttggtttaatatattatttggtcctttaatttactttttagatttcattttggtcatctaactgtaaagtgtcttaatttggtcccataaatcttctgtc 38473580  T
Q  407 gtttactgttttggtc 422  Q
    ||||||| ||||||||    
T  38473579 gtttactattttggtc 38473564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 2167560 - 2167455
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccat 484  Q
    ||||||||||||||||| || |||||| | |||||||| |||||||||||||||||| | |||| | ||||||| || |  |||| | ||| ||||||||    
T  2167560 ttggtcccataaatcttctgccgtttattattttggtc-tctctgttagtttttaaccttaaatgtctaaggtgaaccaactttatagatggtccaccat 2167462  T
Q  485 agacctt 491  Q
    |||||||    
T  2167461 agacctt 2167455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 308 - 386
Target Start/End: Complemental strand, 5062310 - 5062232
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||||||||  |||||||||||||  ||||||||  ||||| |||||||| ||||| ||||||| ||||||||    
T  5062310 tttggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccctaatgataaagtgtctcaatt 5062232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 450
Target Start/End: Original strand, 12933748 - 12933886
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttta 411  Q
    ||||||| ||||||| |||||||||  ||||||||||||||| |||| ||| |||| |||||||| |||||| ||| || ||||| |||| || ||||||    
T  12933748 cttaatatatcatttagtcccttaacttatttttggttttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttctgccgttta 12933847  T
Q  412 ctgttttggtcctctctgttagtttttaacatcaaatat 450  Q
    |  ||| |||||| || |||  |||||||| | ||||||    
T  12933848 ccatttcggtcctttccgtttatttttaaccttaaatat 12933886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 432
Target Start/End: Complemental strand, 8762520 - 8762399
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgttt 410  Q
    |||||||| ||| |||||||||||||  |||||||  |||||| ||||||||  | | |||||| | |||||||| |||| ||||||| || ||||||||    
T  8762520 gcttaatatatcgtttggtcccttaacttatttttaattttcaatttggtcccatgactataaaatgtctcaatttggtcacataaattttatgtcgttt 8762421  T
Q  411 actgttttggtcctctctgtta 432  Q
    ||| |||| |||||||| ||||    
T  8762420 actattttagtcctctccgtta 8762399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 314 - 438
Target Start/End: Complemental strand, 18695765 - 18695640
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    |||||||||  |||||||||||||| ||||||||||||||| |||  |||  ||| |||||||| |||||| |||||||||||| ||||    |||||||    
T  18695765 ttaatacatgctttggtcccttaatttatttttggttttcattttattcccttaactataaagtgtctcaatttggtcccataagtcttcatccgtttac 18695666  T
Q  413 tgttttggtcctctctgttagttttt 438  Q
    |  | ||||| |||| ||||||||||    
T  18695665 taatatggtcatctccgttagttttt 18695640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 368
Target Start/End: Original strand, 19825869 - 19825926
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||| ||| ||||    
T  19825869 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaa 19825926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 224708 - 224636
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||||| |||||||||||  ||||||  ||||||| |||||||| |||| |||||||| ||||||||    
T  224708 ttaatacatcatctggtcccttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatt 224636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 438
Target Start/End: Complemental strand, 42980842 - 42980702
Alignment:
Q  299 ttttttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaa 397  Q
    |||||| | |||||||||||||||  |||| ||  ||||| ||||||| | ||||| ||||||||| ||| |||||||| |||||| |||||| |||| |    
T  42980842 ttttttttttttggcttaatacatgctttgatcttttaatttatttttagatttcattttggtcctataactataaagtgtctcaatttggtctcatata 42980743  T
Q  398 tcttttgtcgtttactgttttggtcctctctgttagttttt 438  Q
    |||| || | |||||  |||||||||| || |||| |||||    
T  42980742 tcttctgccatttaccattttggtcctttccgttaattttt 42980702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 4568095 - 4568020
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| |||||||| |||| |||||||| ||||||||    
T  4568095 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatt 4568020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 313 - 440
Target Start/End: Complemental strand, 5977194 - 5977064
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtat--ctcaatt-ggtcccataaatcttttgtcgtt 409  Q
    |||||||||| ||||||||||||||| ||||||| ||||| | || ||||| |||| |||||||| |  ||||||| |||||||||| | ||    ||||    
T  5977194 cttaatacattatttggtcccttaatttattttttgttttaatttgggtcccctaactataaagtgtgtctcaatttggtcccataagtattcatccgtt 5977095  T
Q  410 tactgttttggtcctctctgttagtttttaa 440  Q
    ||||  | ||||||| |||||||||||||||    
T  5977094 tactaatgtggtcctttctgttagtttttaa 5977064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 385 - 432
Target Start/End: Original strand, 10084668 - 10084715
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgtta 432  Q
    |||||| |||||||||||||||||||||| ||||||||||||| ||||    
T  10084668 ttggtctcataaatcttttgtcgtttactattttggtcctctccgtta 10084715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 309 - 386
Target Start/End: Original strand, 19050742 - 19050819
Alignment:
Q  309 ttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||||  |||||||||||||  ||||||||| ||||| |||||||| |||| | |||| | ||||||||    
T  19050742 ttggcttaatacatgttttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatt 19050819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 32734201 - 32734274
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    |||||||||||| |||| ||||||||||| |||||||| | || ||||||||||||  | |||||| |||||||    
T  32734201 ttggtcccataactcttctgtcgtttactattttggtcatttccgttagtttttaatcttaaatatctaaggtg 32734274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 38471359 - 38471432
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    ||||| ||||||||||| |  |||||||| ||||||| |||||||||| |||||||| | |||| |||||||||    
T  38471359 ttggttccataaatcttcttccgtttactattttggttctctctgttaatttttaaccttaaatgtttaaggtg 38471432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 310 - 386
Target Start/End: Original strand, 20988684 - 20988760
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||||||  |||||||||||||  |||||| |  ||||| |||||||| |||| |||||||| ||||||||    
T  20988684 tggcttaatacatgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatt 20988760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 385 - 441
Target Start/End: Complemental strand, 22819563 - 22819507
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaac 441  Q
    |||||||||||| |||| || |||||||| |||||||| |||| |||||||||||||    
T  22819563 ttggtcccataactcttctgccgtttactattttggtcatctccgttagtttttaac 22819507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 374
Target Start/End: Complemental strand, 328275 - 328212
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataa 374  Q
    |||||||||||||||||| || |||||  ||||||| ||||||| |||||||| |||| |||||    
T  328275 ggcttaatacatcatttgatcacttaacttattttttgttttcaatttggtcccctaactataa 328212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 432
Target Start/End: Original strand, 15509193 - 15509312
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    |||||||||  |||||||||||||  |||||| || ||| | |||||||| |||| |||||||| |||||| |||||||| ||  |||| || ||||  |    
T  15509193 ttaatacatgctttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacc 15509292  T
Q  413 tgttttggtcctctctgtta 432  Q
    | ||||||||||||| ||||    
T  15509293 tattttggtcctctccgtta 15509312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 438
Target Start/End: Complemental strand, 15857694 - 15857611
Alignment:
Q  356 tttggtcctctaattataaagtatctcaattggt-cccataaatcttttgtcgtttactgttttggtcctctctgttagttttt 438  Q
    ||||||||  ||| |||||||| | |||||| || |||||||||||| ||||||||||  |||||||| |||| ||||||||||    
T  15857694 tttggtcccttaactataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatctccgttagttttt 15857611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 441
Target Start/End: Complemental strand, 20991770 - 20991639
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||| ||||||||  |||||| || ||||| ||||| || |||| |||||| | |||||| |||||||| ||  ||||||||||||    
T  20991770 ggcttaatacatgttttgatcccttaacttattttcggatttcattttggccccctaactataaaatgtctcaatttggtcccttatgtcttttgtcgtt 20991671  T
Q  410 tactgttttggtcctctctgttagtttttaac 441  Q
      || |||||||||| || ||||  |||||||    
T  20991670 acctcttttggtcctatccgttacattttaac 20991639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 21387871 - 21387918
Alignment:
Q  549 atgtagggtctattgtattttattgtaaaccaccaacacctaatattt 596  Q
    ||||||||||||||||| |||| ||||||| || ||||||||||||||    
T  21387871 atgtagggtctattgtactttactgtaaacgactaacacctaatattt 21387918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 374
Target Start/End: Original strand, 24805286 - 24805349
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataa 374  Q
    ||||||||||||||||||||| |||||  ||||||||||||| | ||||| || |||| |||||    
T  24805286 ggcttaatacatcatttggtctcttaacttatttttggtttttattttggccccctaactataa 24805349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 308 - 441
Target Start/End: Complemental strand, 12831062 - 12830928
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtc 406  Q
    ||||||||||||||||  | ||||||||||  ||||||   || ||| |||| |||  ||| ||| |||| |||||||| ||||| |||| |||| ||      
T  12831062 tttggcttaatacatctctcggtcccttaacttattttattttctcagtttgatcccttaactattaagtgtctcaatttggtcctataactcttctgct 12830963  T
Q  407 gtttactgttttggtcctctctgttagtttttaac 441  Q
    ||||||| ||||||||||||| |||| ||||||||    
T  12830962 gtttactattttggtcctctccgttaatttttaac 12830928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 314 - 368
Target Start/End: Complemental strand, 33362685 - 33362631
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    |||||| |||||||||||||||||  ||||||| ||||| | |||||||||||||    
T  33362685 ttaatatatcatttggtcccttaacttattttttgtttttaatttggtcctctaa 33362631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 315 - 440
Target Start/End: Original strand, 40058017 - 40058143
Alignment:
Q  315 taatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttact 413  Q
    ||||| ||| |||| || |||||  ||||||||||||||| |||| |||  ||| ||| |||| | |||| |||||| ||||| |||| || |||||||     
T  40058017 taatatatcgtttgatctcttaacttatttttggttttcattttgatcccttaactattaagtgtttcaaattggtctcataactcttctgccgtttacc 40058116  T
Q  414 gttttggtcctctctgttagtttttaa 440  Q
     |||||||| |||| ||||||||||||    
T  40058117 attttggtcatctccgttagtttttaa 40058143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 373
Target Start/End: Original strand, 3076815 - 3076880
Alignment:
Q  308 tttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattata 373  Q
    |||||||||||||||  |||||||||||||  ||||||||  ||||| |||||||| |||| ||||    
T  3076815 tttggcttaatacatgctttggtcccttaacttatttttgaatttcaatttggtcccctaagtata 3076880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 21389262 - 21389136
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  ||||||||||||||| |||  |||  ||| |||  ||| |||||| |||||||||||| ||||    ||||    
T  21389262 ggcttaatacatgctttggtcccttaacttatttttggttttcatttttttcccttaactat--agtgtctcaatttggtcccataagtcttcctccgtt 21389165  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    ||||  | |||||||||| ||||||||||    
T  21389164 tactaatatggtcctctccgttagttttt 21389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 368
Target Start/End: Original strand, 30912309 - 30912366
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    |||||||||||||||||||| ||||||  ||||||  ||||||| ||| |||||||||    
T  30912309 ggcttaatacatcatttggttccttaacttattttctgttttcaatttagtcctctaa 30912366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 30916239 - 30916182
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaa 368  Q
    |||||||||||||||||||||||||||  ||||||  ||||||| ||| |||| ||||    
T  30916239 ggcttaatacatcatttggtcccttaacttattttatgttttcaatttagtcccctaa 30916182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 377
Target Start/End: Complemental strand, 40059448 - 40059383
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagt 377  Q
    |||||||| || ||||||||||||||  ||||||||||||||| |||| ||| |||| ||| ||||    
T  40059448 gcttaatatataatttggtcccttaacttatttttggttttcattttgatcccctaactattaagt 40059383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 6914933 - 6914881
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcc 363  Q
    |||||||||||| ||||||||||||||  ||||||||  ||||| ||||||||    
T  6914933 ggcttaatacatgatttggtcccttaacttatttttgaatttcattttggtcc 6914881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 441
Target Start/End: Complemental strand, 26912456 - 26912328
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    |||||||||  |||| ||||||||  ||||||| ||||||| ||||||   |||||||||||||  || || || |||| |||| |||| | ||||||||    
T  26912456 ttaatacatgctttgatcccttaacttattttttgttttcattttggtttcctaattataaagtgacttaatttagtcctataattcttctatcgtttac 26912357  T
Q  413 tgttttggtcctctctgttagtttttaac 441  Q
      || |||||| |||||||| ||||||||    
T  26912356 aattgtggtcccctctgttattttttaac 26912328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 32411959 - 32412011
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcc 363  Q
    ||||||||||||  |||||||||||||  ||||||||| ||||| ||||||||    
T  32411959 ggcttaatacatgttttggtcccttaacttatttttggatttcaatttggtcc 32412011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 311 - 471
Target Start/End: Complemental strand, 749 - 588
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||| ||| |||||||||||| |||| |||||||| |||||| || |||||||||||||| || ||||    
T  749 ggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtt 650  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaa 471  Q
    |||  |||||||| |||| ||||||||||||||| ||| || ||||||| || || ||||||    
T  649 taccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaa 588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 311 - 471
Target Start/End: Original strand, 525 - 686
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||| ||| |||||||||||| |||| |||||||| |||||| || |||||||||||||| || ||||    
T  525 ggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtt 624  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaa 471  Q
    |||  |||||||| |||| ||||||||||||||| ||| || ||||||| || || ||||||    
T  625 taccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaa 686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 311 - 471
Target Start/End: Complemental strand, 9599 - 9438
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||||||||  ||||||| ||| |||||||||||| |||| |||||||| |||||| || |||||||||||||| || ||||    
T  9599 ggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtt 9500  T
Q  410 tactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaa 471  Q
    |||  |||||||| |||| ||||||||||||||| ||| || ||||||| || || ||||||    
T  9499 taccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaa 9438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 8374 - 8502
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc-aattggtcccataaatcttttgtcgtt 409  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||||| ||| |||| |||||| | |||| |||||||||||||||||||  ||| ||    
T  8374 ggcttaatccatcatttggtcccttaacttatttttggttttcactttgctcccctaactataaactgtctcaaattggtcccataaatcttcagtcatt 8473  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||| ||| |||| |||| ||||||||||    
T  8474 tactatttcggtcatctccgttagttttt 8502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 313 - 447
Target Start/End: Complemental strand, 40020 - 39885
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttta 411  Q
    |||||||||| |||||||| |||||  ||||||||| |||||||||||||| |||| |||||||| |||||| |||||||||||||||||    | ||      
T  40020 cttaatacattatttggtctcttaacttatttttggatttcactttggtcccctaagtataaagtgtctcaatttggtcccataaatcttcccacattac 39921  T
Q  412 ctgttttggtcctctctgttagtttttaacatcaaa 447  Q
    || |||||||||||||||||||||||||||||||||    
T  39920 ctcttttggtcctctctgttagtttttaacatcaaa 39885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 438
Target Start/End: Original strand, 22125 - 22250
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttta 411  Q
    |||||||||||||||| |||||||   |||||||| ||||||||||| | |||||| |||||| | |||||| ||| || |||||||||| |||||||||    
T  22125 cttaatacatcatttgatcccttaccttatttttgattttcactttgat-ctctaactataaaatgtctcaatttgttcacataaatcttctgtcgttta 22223  T
Q  412 ctgttttggtcctctctgttagttttt 438  Q
    || |||||||| |||| |||| |||||    
T  22224 ctattttggtcatctccgttaattttt 22250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 314 - 438
Target Start/End: Complemental strand, 48574 - 48449
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttac 412  Q
    ||||||||||||||||||||||||  ||||||||| ||||| ||||||||| ||| |||||||| |||||| ||| |||||||||| || || |||||||    
T  48574 ttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttac 48475  T
Q  413 tgttttggtcctctctgttagttttt 438  Q
    | |||||||| |||| |||| |||||    
T  48474 tcttttggtcatctccgttaattttt 48449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 312 - 458
Target Start/End: Original strand, 47066 - 47213
Alignment:
Q  312 gcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt-ggtcccataaatcttttgtcgttt 410  Q
    ||||||||||||||||||||||||||  ||||||||  ||||| |||| |||  ||| | |||| | |||||||| ||||||||||||||| |  |||||    
T  47066 gcttaatacatcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgttt 47165  T
Q  411 actgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    ||| ||||||||||||| |||| |||||||| | |||| | |||||||    
T  47166 actattttggtcctctccgttaatttttaactttaaatgtctaaggtg 47213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 636 - 512
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||| ||| ||||  ||||||||||||||| || ||||| |||| |||||||| |||||| |||||  |||||||||| || ||||    
T  636 ggcttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgtt 537  T
Q  410 tactgttttggtcctctctgttagt 434  Q
    |||| ||||||||||||| ||||||    
T  536 tactattttggtcctctccgttagt 512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 2386 - 2258
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  ||||||||||||||| |||||||| ||||||||||||| | |||| |||||||||||| |||| |   |||    
T  2386 ggcttaatacatgctttggtcccttaacttatttttggttttcattttggtcccctaattataaagtgtttcaatttggtcccataactcttctactgtt 2287  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
    |||| |||||||||| || ||||||||||    
T  2286 tactattttggtcctttccgttagttttt 2258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 302 - 458
Target Start/End: Original strand, 1198 - 1354
Alignment:
Q  302 tttatgtttggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatct 400  Q
    ||||| |||||||||||||||  |||| ||||||||  ||||||||| ||||| |||||||| ||||||||||||| |||||| ||||||  ||||  ||    
T  1198 tttatttttggcttaatacatgttttgatcccttaacttatttttgg-tttcattttggtcccctaattataaagtctctcaatttggtcatataaccct 1296  T
Q  401 tttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtg 458  Q
    | |  |||||||  || |||||||||| |||| |||||||| | |||| |||||||||    
T  1297 tctaccgtttacaattgtggtcctctccgttattttttaaccttaaatgtttaaggtg 1354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 73107 - 72979
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc-aattggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||||||||| ||||  ||||||| || | |||||||| | ||  |||| |||||||    
T  73107 ggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaacaataaagtgtcacaaattggtctcttatgtcttctgtcgtt 73008  T
Q  410 tactgttttggtcctctctgttagttttt 438  Q
      || ||||||||||||| ||||||||||    
T  73007 acctcttttggtcctctccgttagttttt 72979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 24936 - 24861
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||| |||||||||||||| ||||||||||||||| |||||||| ||||||||||||| | ||||||    
T  24936 ggcttaatacatcgtttggtcccttaatttatttttggttttcagtttggtcccctaattataaagtgtttcaatt 24861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 311 - 401
Target Start/End: Original strand, 23401 - 23492
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatctt 401  Q
    ||||||||||||||| |||||||||||  ||||||||||||||| |||||||| |||| |||||| | |||||| |||||||||||| ||||    
T  23401 ggcttaatacatcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataactctt 23492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 1750 - 1876
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||||  |||||||||||||  |||||| || ||||| |||||||| ||||||||||||| |||||| |||||||| ||  |||| |||||||    
T  1750 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaattataaagtgtctcaatttggtcccttatgtcttctgtcgtt 1849  T
Q  410 tactgttttggtcctctctgttagttt 436  Q
      || ||||||||||||| ||||||||    
T  1850 acctcttttggtcctctccgttagttt 1876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 316 - 485
Target Start/End: Complemental strand, 13320 - 13150
Alignment:
Q  316 aatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactg 414  Q
    |||||||||| || ||||||||  ||||||||||||||| |||||||| |||| |||||| | |||||| || ||||||||| |||| |  ||||  ||     
T  13320 aatacatcatatgatcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttcgtcccataactcttcttccgttacctc 13221  T
Q  415 ttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccata 485  Q
    |||||||||| ||  |||| |||||||||||||| | ||||||| || || |||||| ||| |||||||||    
T  13220 ttttggtcctatccattaggttttaacatcaaatgtctaaggtgaaccatatttaaagatggtccaccata 13150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 315 - 438
Target Start/End: Original strand, 11705 - 11829
Alignment:
Q  315 taatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttact 413  Q
    ||||||||| |||||||||||||  |||||||  |||||| ||| |||| ||||||||||||| | |||| |||||||| ||  |||| |   |||  ||    
T  11705 taatacatcgtttggtcccttaacttattttttattttcagtttagtcccctaattataaagtgtttcaatttggtcccttatgtcttctccagttacct 11804  T
Q  414 gttttggtcctctctgttagttttt 438  Q
     ||||||||||||| ||||||||||    
T  11805 attttggtcctctccgttagttttt 11829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 385 - 485
Target Start/End: Original strand, 40978 - 41078
Alignment:
Q  385 ttggtcccataaatcttttgtcgtttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccat 484  Q
    |||||| ||||| |||| |||||||||||||||| || |||||||||||||||||||||||||| | ||||||| || || ||||||  || ||||||||    
T  40978 ttggtctcataagtcttctgtcgtttactgttttagttctctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccat 41077  T
Q  485 a 485  Q
    |    
T  41078 a 41078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 42388 - 42343
Alignment:
Q  389 tcccataaatcttttgtcgtttactgttttggtcctctctgttagt 434  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  42388 tcccataaatcttctgtcgtttactattttggtcctctctgttagt 42343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 313 - 421
Target Start/End: Original strand, 12907 - 13016
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttta 411  Q
    ||||||| || |||||||| |||||  |||||||| |||| ||||||||||  |||||||||||| |||||| |||||| ||||||| ||||||||||||    
T  12907 cttaatatattatttggtctcttaacttatttttgatttttactttggtcccataattataaagtgtctcaatttggtctcataaatattttgtcgttta 13006  T
Q  412 ctgttttggt 421  Q
     | |||||||    
T  13007 gtattttggt 13016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 316 - 448
Target Start/End: Complemental strand, 77297 - 77164
Alignment:
Q  316 aatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtttactg 414  Q
    |||||||||||| ||| |||||  ||||||| |||||||||||||||  |||| |||||||  | |||| |||||||||||||| || |  |||||||||    
T  77297 aatacatcatttagtctcttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtcccataaatattctaccgtttactg 77198  T
Q  415 ttttggtcctctctgttagtttttaacatcaaat 448  Q
    |||||||| |||| |||| | ||| |||||||||    
T  77197 ttttggtcttctccgttaatgtttgacatcaaat 77164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 75754 - 75868
Alignment:
Q  325 tttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctc-aattggtcccataaatcttttgtcgtttactgttttggtcc 423  Q
    |||||| ||||||| ||||||| ||||| |||||||||||||||||||||||| |||| || || |||  ||  ||||||||||||  || |||||||||    
T  75754 tttggttccttaatttattttttgtttttactttggtcctctaattataaagtgtctcaaactgatccattatgtcttttgtcgttatctattttggtcc 75853  T
Q  424 tctctgttagttttt 438  Q
    || | ||||||||||    
T  75854 tcgcagttagttttt 75868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 242653 - 242772
Alignment:
Q  82 gactcacaatatatgataatttatattatatttccttatttgtctttaatttcataagattaaaaatcacaaatgatcttcatcttt----ctcttcatc 177  Q
    ||||||||| ||||||| |||||||  || ||||| |||||||||| |||||  ||| |||||||||||| ||  ||||||||||||    |||||||||    
T  242653 gactcacaacatatgatcatttata--atctttccctatttgtcttgaattttctaaaattaaaaatcaccaacaatcttcatctttttccctcttcatc 242750  T
Q  178 ttccaacttcatccccataaca 199  Q
    | ||||||||||||||||||||    
T  242751 tcccaacttcatccccataaca 242772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 310 - 485
Target Start/End: Complemental strand, 207920 - 207744
Alignment:
Q  310 tggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgt 408  Q
    ||||||||||||||||||||||||||||| ||||||||  ||||| |||  ||  ||||||| |||   |||||| ||| |||| ||  |||| |  |||    
T  207920 tggcttaatacatcatttggtcccttaatttatttttgactttcattttaatctcctaattaaaaaacgtctcaaattgatcccttatgtcttcttccgt 207821  T
Q  409 ttactgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccata 485  Q
    |  || ||||||||||||| |||||||||||||||||||| | | ||||| || |||||||||  || |||||||||    
T  207820 tatctcttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccata 207744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 313 - 432
Target Start/End: Complemental strand, 145988 - 145868
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgttta 411  Q
    ||||||||||||||||||  |||||| ||||||||||||||| |||  ||| |||| |||||| | ||| || ||||||| ||||||||| || ||||||    
T  145988 cttaatacatcatttggtttcttaatttatttttggttttcaatttaatcccctaactataaaatgtcttaatttggtccaataaatcttatgccgttta 145889  T
Q  412 ctgttttggtcctctctgtta 432  Q
    || |||||||| |||| ||||    
T  145888 ctattttggtcatctccgtta 145868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 311 - 422
Target Start/End: Original strand, 96155 - 96267
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    |||||||||||||||||||||| ||||  |||||| | |||||| |||||||| |||| |||||||| |||||| ||| ||| ||||||||| |  ||||    
T  96155 ggcttaatacatcatttggtccattaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttgatccgataaatcttcttccgtt 96254  T
Q  410 tactgttttggtc 422  Q
    |||  ||||||||    
T  96255 taccattttggtc 96267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 96936 - 96861
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||||||||||| ||||||||  ||||||||||||||| |||| ||| ||||  ||||| | ||||||||    
T  96936 ggcttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccctaacaataaactgtctcaatt 96861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 491
Target Start/End: Original strand, 15945 - 16121
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaattggtcccataaatcttttgtcgttt 410  Q
    ||||||||||||| |  ||||||||||  ||||||   |||||||||||||||  ||  |||||||||| |||||    |||||||| ||| || |||||    
T  15945 ggcttaatacatcctccggtcccttaacttattttattttttcactttggtcccttagctataaagtatttcaat----cccataaaccttatgccgttt 16040  T
Q  411 actgttttggtcctctctgttagtttttaacatcaaatatttaaggtgtactatgtttaaaaatgatccaccatagacctt 491  Q
    ||| |||| |||||||| ||||||||||||| | |||| | |||| || || |  |||| | ||| |||||||||||||||    
T  16041 actattttagtcctctccgttagtttttaaccttaaatgtctaagatgaaccaactttatagatggtccaccatagacctt 16121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 6685 - 6610
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  ||| || ||||||  |||||||| |||||| |||||||||||||||||||| | ||||||||    
T  6685 ggcttaatacatgctttagttccttaaattatttttgattttcattttggtcctctaattataaaatgtctcaatt 6610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 313 - 409
Target Start/End: Original strand, 25919 - 26016
Alignment:
Q  313 cttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaa-ttggtcccataaatcttttgtcgtt 409  Q
    ||||||||||  |||||||||||||  |||||| |  ||||| |||||||| |||| |||||||| |||||| |||||||| ||  ||||||||||||    
T  25919 cttaatacatgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgtt 26016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 5164 - 5239
Alignment:
Q  311 ggcttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    ||||||||||||  |||||||||||||  ||||||||| |||   |||||||| |||| |||||||| ||||||||    
T  5164 ggcttaatacatgctttggtcccttaacttatttttggattttcttttggtcccctaactataaagtgtctcaatt 5239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 20389 - 20461
Alignment:
Q  314 ttaatacatcatttggtcccttaatgtatttttggttttcactttggtcctctaattataaagtatctcaatt 386  Q
    |||||||||  |||| ||||||||| ||||||||  ||||| ||||||||||||| | |||| | ||||||||    
T  20389 ttaatacatgttttgatcccttaatttatttttgaatttcaatttggtcctctaactttaaactgtctcaatt 20461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University