View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13763_low_201 (Length: 210)
Name: NF13763_low_201
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13763_low_201 |
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Alignment Details
Target: chr1 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 17517428 - 17517250
Alignment:
| Q |
18 |
attataataagtagaacatagtgcaaaatataaaggaaccacaatgttctcaccttattttgttcaagagtacactctttgaaaacaagacactcacact |
117 |
Q |
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| T |
17517428 |
attataataagtaaaacataatgcaaaatataaaggaaccacaatgttctcaccttattttgttcaagagtgcactctttgaaaacaagacactcacact |
17517329 |
T |
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| Q |
118 |
cctatcctatcctatataatgtatgaaaatatattacaacttgtgcttaaatctattggattcatataaaccattttctt |
197 |
Q |
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|||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17517328 |
cctatcctat-atatagaatgtatgaaaatgtattgcaacttgtgcttaaatctattggattcatataaaccattttctt |
17517250 |
T |
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