View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13763_low_49 (Length: 508)
Name: NF13763_low_49
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13763_low_49 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 25)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 17 - 248
Target Start/End: Complemental strand, 4856666 - 4856435
Alignment:
| Q |
17 |
aaggaacatgtaaaattgttgaataattcaattcgtacacaattttgacatttagtaaatgacttagattgaccataaactcacattgagtctctaacta |
116 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4856666 |
aaggaacatgtaacattgttgaataattcaattcatacacaattttgacatttagtacatgacttagattgaccataaactcacattgagtctctaacta |
4856567 |
T |
|
| Q |
117 |
gtataaaaccagtatactccatatgtattatgcaccaacactaataataatatcacttcttaaaatggctaattcctttttcttatccttactagtgttg |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
4856566 |
gtataaaaccagtatactccatatgtattatgcaccaacactaataattatatcacttcttaaaatggctaattcatttttcttatccttattagtgtta |
4856467 |
T |
|
| Q |
217 |
ttccttgctgctcttatgtttgttcctcaaca |
248 |
Q |
| |
|
|||||||||||| ||||| ||| ||||||||| |
|
|
| T |
4856466 |
ttccttgctgcttttatgcttgctcctcaaca |
4856435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 17 - 248
Target Start/End: Complemental strand, 4878401 - 4878170
Alignment:
| Q |
17 |
aaggaacatgtaaaattgttgaataattcaattcgtacacaattttgacatttagtaaatgacttagattgaccataaactcacattgagtctctaacta |
116 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4878401 |
aaggaacatgtaacattgttgaataattcaattcatacacaattttgacatttagtacatgacttagattgaccataaactcacattgagtctctaacta |
4878302 |
T |
|
| Q |
117 |
gtataaaaccagtatactccatatgtattatgcaccaacactaataataatatcacttcttaaaatggctaattcctttttcttatccttactagtgttg |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
4878301 |
gtataaaaccagtatactccatatgtattatgcaccaacactaataattatatcacttcttaaaatggctaattcatttttcttatccttattagtgtta |
4878202 |
T |
|
| Q |
217 |
ttccttgctgctcttatgtttgttcctcaaca |
248 |
Q |
| |
|
|||||||||||| ||||| ||| ||||||||| |
|
|
| T |
4878201 |
ttccttgctgcttttatgcttgctcctcaaca |
4878170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 4852693 - 4852464
Alignment:
| Q |
19 |
ggaacatgtaaaattgttgaataattcaattcgtacacaattttgacatttagtaaatgacttagattgaccataaactcacattgagtctctaactagt |
118 |
Q |
| |
|
||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4852693 |
ggaacttgtaacattgttgaataattcaattcatacacaattttgacatttagtaaatgacttagatcgaccataaactcacattgagtctctaactagt |
4852594 |
T |
|
| Q |
119 |
ataaaaccagtatactccatatgtattatgcaccaacactaataataatatcacttcttaaaatggctaattcctttttcttatccttactagtgttgtt |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||| || |
|
|
| T |
4852593 |
ataaaaccagtatactccatatgtattatgcaccaacactaataattatatcacttcttaaaatggctaattcatttttcttatccttattagtgttatt |
4852494 |
T |
|
| Q |
219 |
ccttgctgctcttatgtttgttcctcaaca |
248 |
Q |
| |
|
|||||||||| ||||| ||| ||||||||| |
|
|
| T |
4852493 |
ccttgctgcttttatgcttgctcctcaaca |
4852464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 25 - 254
Target Start/End: Complemental strand, 4835353 - 4835124
Alignment:
| Q |
25 |
tgtaaaattgttgaataattcaattcgtacacaattttgacatttagtaaatgacttagattgaccataaactcacattgagtctctaactagtataaaa |
124 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
4835353 |
tgtaacattgttgaataattcaattcatacacaattttgacatttagtaaatgactttgattgaccataaactcactttgagtctctaattagtataaaa |
4835254 |
T |
|
| Q |
125 |
ccagtatactccatatgtattatgcaccaacactaataataatatcacttcttaaaatggctaattcctttttcttatccttactagtgttgttccttgc |
224 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | |||||||| |
|
|
| T |
4835253 |
ccagttaactccatatgtattatgcaccaacactaataataatatcacttcttaaaatggctaaatcctttttcttatccttgctagtggtattccttgc |
4835154 |
T |
|
| Q |
225 |
tgctcttatgtttgttcctcaacattttgc |
254 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |
|
|
| T |
4835153 |
tgctcttatgtttggtcctcaacattttgc |
4835124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 25 - 342
Target Start/End: Complemental strand, 4842038 - 4841735
Alignment:
| Q |
25 |
tgtaaaattgttgaataattcaattcgtacacaattttgacatttagtaaatgacttagattgaccataaactcacattgagtctctaactagtataaaa |
124 |
Q |
| |
|
||||| |||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4842038 |
tgtaacattgttgaataattcaattcatacataattttgacatttagtaaataacttagattgaccataaactcacattgagtctctaattagtataaaa |
4841939 |
T |
|
| Q |
125 |
ccagtatactccatatgtattatgcaccaacactaataataatatcacttcttaaaatggctaattcctttttcttatccttactagtgttgttccttgc |
224 |
Q |
| |
|
||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |
|
|
| T |
4841938 |
ccagttaattccatatgtattatgcaccaacac-aataataatatcacttcttaaaatggctaaatcctttttcttatccttattagtgttattccttgc |
4841840 |
T |
|
| Q |
225 |
tgctcttatgtttgttcctcaacattttgcagttgatgccatacgtctccctccaactactatcccagaacaaaaatttcccaattgggctccatacgta |
324 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||| | |||||| |||| |
|
|
| T |
4841839 |
tgctcttatgttttctcctcaacattttgca-------------atctccctccaattactatcccagaacaaaaatttaccaatttgactccattcgta |
4841753 |
T |
|
| Q |
325 |
aagaatttaccacatgga |
342 |
Q |
| |
|
| | ||||||||||||| |
|
|
| T |
4841752 |
aggggtttaccacatgga |
4841735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 78 - 280
Target Start/End: Complemental strand, 4880911 - 4880708
Alignment:
| Q |
78 |
acttagattgaccataaactcacattgagtctctaactagtataaaaccagtata-ctccatatgtattatgcaccaacactaataataatatcacttct |
176 |
Q |
| |
|
|||| ||||||| ||| ||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4880911 |
actttgattgacgatagactcacattgagtctctaactagtataaaaccagtttaactccctatgtattatgcaccaacactaataattatatcacttct |
4880812 |
T |
|
| Q |
177 |
taaaatggctaattcctttttcttatccttactagtgttgttccttgctgctcttatgtttgttcctcaacattttgcagttgatgccatacgtctccct |
276 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
4880811 |
taaaatggctaaatcctttttcttatccttattagtgttattccttgctgctcttatgtttgttcctcaacattttgctgttgatgccatacatctccct |
4880712 |
T |
|
| Q |
277 |
ccaa |
280 |
Q |
| |
|
|||| |
|
|
| T |
4880711 |
ccaa |
4880708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 78 - 279
Target Start/End: Complemental strand, 4860904 - 4860702
Alignment:
| Q |
78 |
acttagattgaccataaactcacattgagtctctaactagtataaaaccagtata-ctccatatgtattatgcaccaacactaataataatatcacttct |
176 |
Q |
| |
|
|||| ||||||| ||| ||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4860904 |
actttgattgacgatagactcacattgagtctctaactagtataaaaccagtttaactccctatgtattatgcaccaacactaataattatatcacttct |
4860805 |
T |
|
| Q |
177 |
taaaatggctaattcctttttcttatccttactagtgttgttccttgctgctcttatgtttgttcctcaacattttgcagttgatgccatacgtctccct |
276 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
4860804 |
taaaatggctaaatcctttttcttatccttattagtgttattccttgctgctcttatgtttgttcctcaacattttgctgttgatgccatacatctccct |
4860705 |
T |
|
| Q |
277 |
cca |
279 |
Q |
| |
|
||| |
|
|
| T |
4860704 |
cca |
4860702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 74 - 263
Target Start/End: Complemental strand, 4871689 - 4871501
Alignment:
| Q |
74 |
aatgacttagattgaccataaactcacattgagtctctaactagtataaaaccagtatactccatatgtattatgcaccaacactaataataatatcact |
173 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4871689 |
aatgacttagattgaccataaactcacattgagtctctaactagtataaagccagttaactccatatgtattatgcaccaacac-aataataatatcact |
4871591 |
T |
|
| Q |
174 |
tcttaaaatggctaattcctttttcttatccttactagtgttgttccttgctgctcttatgtttgttcctcaacattttgcagttgatgc |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||| ||||||||||||||| |||||||| |
|
|
| T |
4871590 |
tcttaaaatggctaattcctttttcttatccttattagtgttattccttgctgcttttatgcttgctcctcaacattttgctgttgatgc |
4871501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 66 - 234
Target Start/End: Complemental strand, 4826570 - 4826402
Alignment:
| Q |
66 |
atttagtaaatgacttagattgaccataaactcacattgagtctctaactagtataaaaccagtatactccatatgtattatgcaccaacactaataata |
165 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
4826570 |
atttagtaaatgacttagattgaccataaactcacattgagtctctaactagtataaaaccagttaactctctatgtattatgcaccaacactaataata |
4826471 |
T |
|
| Q |
166 |
atatcacttcttaaaatggctaattcctttttcttatccttactagtgttgttccttgctgctcttatg |
234 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||| |||||| | |||||||||||||||||| |
|
|
| T |
4826470 |
atatcacttcttaaagtggctaattcctttttcttatccttgctagtggtattccttgctgctcttatg |
4826402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 74 - 263
Target Start/End: Complemental strand, 4845930 - 4845742
Alignment:
| Q |
74 |
aatgacttagattgaccataaactcacattgagtctctaactagtataaaaccagtatactccatatgtattatgcaccaacactaataataatatcact |
173 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4845930 |
aatgacttagattgaccaaaaaatcacattgagtctctaactagtataaagccagttaactacctatgtattatgcaccaacac-aataataatatcact |
4845832 |
T |
|
| Q |
174 |
tcttaaaatggctaattcctttttcttatccttactagtgttgttccttgctgctcttatgtttgttcctcaacattttgcagttgatgc |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||| ||||||||||||||| |||||||| |
|
|
| T |
4845831 |
tcttaaaatggctaattcctttttcttatccttattagtgttattccttgctgcttttatgcttgctcctcaacattttgctgttgatgc |
4845742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 379 - 502
Target Start/End: Complemental strand, 4841690 - 4841568
Alignment:
| Q |
379 |
tagacatttctgaaacatcaaggcgacaatgcataccaatatcaactaagtaattgtttttgcgtgatttggttaaggtttttctgctgtgattctattg |
478 |
Q |
| |
|
||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
4841690 |
tagacatttctgaaacatcaatgcgacaaggcataccaatatcaactaagcaattgtttttgcttgatttggttaaggtttttctgctgtgattctattg |
4841591 |
T |
|
| Q |
479 |
tattaaggggttgtttgggtggtt |
502 |
Q |
| |
|
|||||| ||||||||| ||||||| |
|
|
| T |
4841590 |
tattaa-gggttgtttaggtggtt |
4841568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 379 - 507
Target Start/End: Complemental strand, 4834978 - 4834846
Alignment:
| Q |
379 |
tagacatttctgaaacatcaaggcgacaatgcataccaatatcaactaagtaattgttttt-----gcgtgatttggttaaggtttttctgctgtgattc |
473 |
Q |
| |
|
||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
4834978 |
tagacatttctgaaacatcaacgcgacaaggcatacaaatatcaactaagtaattgtttttaatttgcttgatttggttaaggtttttctgctgtgattc |
4834879 |
T |
|
| Q |
474 |
tattgtattaaggggttgtttgggtggttctgtg |
507 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||| |
|
|
| T |
4834878 |
tattgtattaa-gggttgtttgggtggttttgtg |
4834846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 4842946 - 4842873
Alignment:
| Q |
25 |
tgtaaaattgttgaataattcaattcgtacacaattttgacatttagtaaatgacttagattgaccataaactc |
98 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4842946 |
tgtaacattgttgaataattcaattcatacacaattttgacatttagtaaatgacttagattgaccataaactc |
4842873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 4868642 - 4868569
Alignment:
| Q |
25 |
tgtaaaattgttgaataattcaattcgtacacaattttgacatttagtaaatgacttagattgaccataaactc |
98 |
Q |
| |
|
||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4868642 |
tgtaacattgttgaataattcaattcatacataattttgacatttagtaaatgacttagattgaccataaactc |
4868569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 437 - 507
Target Start/End: Complemental strand, 4871241 - 4871172
Alignment:
| Q |
437 |
tttgcgtgatttggttaaggtttttctgctgtgattctattgtattaaggggttgtttgggtggttctgtg |
507 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
|
|
| T |
4871241 |
tttgcttgatttggttaaggtttttctgctgtgattatattgtattaa-gggttgtttgggtggttttgtg |
4871172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 4837466 - 4837426
Alignment:
| Q |
66 |
atttagtaaatgacttagattgaccataaactcacattgag |
106 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4837466 |
atttagtaaatgacttatattgaccataaactcacattgag |
4837426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 4810411 - 4810356
Alignment:
| Q |
189 |
ttcctttttcttatccttactagtgttgttccttgctgctcttatgtttgttcctca |
245 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||| |||||||| |||||||||| |
|
|
| T |
4810411 |
ttcctttttcttatacttactt-tgttgttccttgcttctcttatgcttgttcctca |
4810356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 438
Target Start/End: Complemental strand, 4826249 - 4826193
Alignment:
| Q |
382 |
acatttctgaaacatcaaggcgacaatgcataccaatatcaactaagtaattgtttt |
438 |
Q |
| |
|
|||||||||||||||||| || |||| |||| ||||||| |||||||||||||||| |
|
|
| T |
4826249 |
acatttctgaaacatcaatgcaacaagacatatcaatatctactaagtaattgtttt |
4826193 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 502
Target Start/End: Complemental strand, 4860510 - 4860467
Alignment:
| Q |
458 |
ttttctgctgtgattctattgtattaaggggttgtttgggtggtt |
502 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
4860510 |
ttttctgctgtgattctattgtattaa-gggttgtttgggcggtt |
4860467 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 502
Target Start/End: Complemental strand, 4880517 - 4880474
Alignment:
| Q |
458 |
ttttctgctgtgattctattgtattaaggggttgtttgggtggtt |
502 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
4880517 |
ttttctgctgtgattctattgtattaa-gggttgtttgggcggtt |
4880474 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 4536879 - 4536805
Alignment:
| Q |
169 |
tcacttcttaaaatggctaattcctttttcttatccttactagtgttgttccttgctgctcttatgtttgttcctcaa |
246 |
Q |
| |
|
|||||||||||||||||| || |||| | ||||||||||| |||||||||||||||| ||||| ||||| ||||| |
|
|
| T |
4536879 |
tcacttcttaaaatggct---tcattttacctatccttactattgttgttccttgctgcccttatccttgtttctcaa |
4536805 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 4860949 - 4860906
Alignment:
| Q |
19 |
ggaacatgtaaaattgttgaataattcaattcgtacacaatttt |
62 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
4860949 |
ggaacttgtaacattgttgaataattcaattcgtgcacaatttt |
4860906 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 4880956 - 4880913
Alignment:
| Q |
19 |
ggaacatgtaaaattgttgaataattcaattcgtacacaatttt |
62 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
4880956 |
ggaacttgtaacattgttgaataattcaattcgtgcacaatttt |
4880913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 4845654 - 4845601
Alignment:
| Q |
382 |
acatttctgaaacatcaaggcgacaatgcataccaatatcaactaagtaattgt |
435 |
Q |
| |
|
|||||||||||||||||| || |||| |||| ||||||| ||||||||||||| |
|
|
| T |
4845654 |
acatttctgaaacatcaatgcaacaagacatatcaatatctactaagtaattgt |
4845601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 4871413 - 4871360
Alignment:
| Q |
382 |
acatttctgaaacatcaaggcgacaatgcataccaatatcaactaagtaattgt |
435 |
Q |
| |
|
|||||||||||||||||| || |||| |||| ||||||| ||||||||||||| |
|
|
| T |
4871413 |
acatttctgaaacatcaatgcaacaagacatatcaatatctactaagtaattgt |
4871360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 95 - 239
Target Start/End: Original strand, 21703749 - 21703893
Alignment:
| Q |
95 |
actcacattgagtctctaactagtataaaaccagtatactccatatgtattatgcaccaacactaataataatatcacttcttaaaatggctaattcctt |
194 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| || ||| | ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| || |
|
|
| T |
21703749 |
actcccattgagtctctaactagtataaaaccggttaacttcctatgtcttatgcaccaacactaatattaatatcacttcttaaaatggctaattcttt |
21703848 |
T |
|
| Q |
195 |
tttcttatccttactagtgttgttccttgctgctcttatgtttgt |
239 |
Q |
| |
|
|||||| |||||||||||| | |||| |||||||||||| |||| |
|
|
| T |
21703849 |
tttcttgtccttactagtggtattccacgctgctcttatgcttgt |
21703893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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