View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13763_low_71 (Length: 441)

Name: NF13763_low_71
Description: NF13763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13763_low_71
NF13763_low_71
[»] chr6 (18 HSPs)
chr6 (19-423)||(17432451-17432851)
chr6 (200-434)||(17453513-17453748)
chr6 (24-137)||(17448425-17448538)
chr6 (16-51)||(12892109-12892144)
chr6 (18-51)||(6808497-6808530)
chr6 (18-51)||(29355855-29355888)
chr6 (16-51)||(1347062-1347097)
chr6 (16-51)||(1354757-1354792)
chr6 (16-51)||(25557823-25557858)
chr6 (16-51)||(25997749-25997784)
chr6 (16-51)||(26097258-26097293)
chr6 (17-51)||(2166410-2166444)
chr6 (17-51)||(2178043-2178077)
chr6 (18-51)||(12886015-12886048)
chr6 (18-51)||(13267827-13267860)
chr6 (18-51)||(23930127-23930160)
chr6 (18-47)||(30786378-30786407)
chr6 (345-434)||(34210974-34211063)
[»] chr4 (37 HSPs)
chr4 (184-429)||(38237089-38237335)
chr4 (185-434)||(38213186-38213436)
chr4 (184-434)||(38225670-38225921)
chr4 (248-434)||(38247616-38247802)
chr4 (211-434)||(38219611-38219834)
chr4 (248-429)||(38252647-38252828)
chr4 (265-429)||(38242371-38242535)
chr4 (16-52)||(20225176-20225212)
chr4 (18-53)||(11394954-11394989)
chr4 (18-53)||(11404681-11404716)
chr4 (16-51)||(16408601-16408636)
chr4 (16-51)||(23501889-23501924)
chr4 (16-51)||(25629149-25629184)
chr4 (16-51)||(32484333-32484368)
chr4 (18-53)||(38755906-38755941)
chr4 (18-53)||(40553935-40553970)
chr4 (16-50)||(8473621-8473655)
chr4 (64-127)||(38213103-38213168)
chr4 (18-52)||(44363129-44363163)
chr4 (17-51)||(56323001-56323035)
chr4 (18-51)||(20639658-20639691)
chr4 (18-51)||(35532094-35532127)
chr4 (184-241)||(38242315-38242371)
chr4 (16-48)||(21647066-21647098)
chr4 (16-51)||(11054148-11054183)
chr4 (20-51)||(13256399-13256430)
chr4 (16-51)||(20225082-20225117)
chr4 (16-51)||(30639479-30639514)
chr4 (16-51)||(38786709-38786744)
chr4 (16-51)||(54175165-54175200)
chr4 (18-51)||(19028013-19028046)
chr4 (16-49)||(29207900-29207933)
chr4 (18-51)||(30352580-30352613)
chr4 (18-51)||(33836487-33836520)
chr4 (18-51)||(36816384-36816417)
chr4 (86-127)||(38237033-38237074)
chr4 (18-50)||(6430627-6430659)
[»] chr2 (27 HSPs)
chr2 (333-429)||(11463326-11463422)
chr2 (265-428)||(11475220-11475383)
chr2 (260-426)||(11480633-11480799)
chr2 (265-427)||(11486454-11486616)
chr2 (18-52)||(14530422-14530456)
chr2 (18-51)||(9671281-9671314)
chr2 (18-51)||(10543802-10543835)
chr2 (18-51)||(10546265-10546298)
chr2 (18-51)||(22371214-22371247)
chr2 (18-51)||(25632611-25632644)
chr2 (18-51)||(36871593-36871626)
chr2 (16-52)||(23397864-23397900)
chr2 (16-52)||(40416870-40416906)
chr2 (18-50)||(40579750-40579782)
chr2 (16-51)||(3633708-3633743)
chr2 (16-51)||(5841130-5841165)
chr2 (16-51)||(21779261-21779296)
chr2 (16-51)||(34080201-34080236)
chr2 (18-47)||(124918-124947)
chr2 (18-51)||(8455316-8455349)
chr2 (18-51)||(11514537-11514570)
chr2 (18-51)||(14444830-14444863)
chr2 (18-51)||(25249738-25249771)
chr2 (18-51)||(39914306-39914339)
chr2 (18-51)||(40762234-40762267)
chr2 (16-49)||(41409962-41409995)
chr2 (23-51)||(17668109-17668137)
[»] scaffold0083 (1 HSPs)
scaffold0083 (284-434)||(49034-49184)
[»] chr1 (17 HSPs)
chr1 (248-434)||(21547852-21548038)
chr1 (16-51)||(20004090-20004125)
chr1 (16-51)||(50606526-50606561)
chr1 (18-52)||(4349763-4349797)
chr1 (18-51)||(10668352-10668385)
chr1 (16-51)||(14617161-14617196)
chr1 (16-51)||(19414560-19414595)
chr1 (16-51)||(30395726-30395761)
chr1 (16-51)||(34725098-34725133)
chr1 (16-51)||(38478282-38478317)
chr1 (18-48)||(45402221-45402251)
chr1 (18-51)||(1517311-1517344)
chr1 (18-51)||(9939589-9939622)
chr1 (18-51)||(27474405-27474438)
chr1 (18-51)||(35005250-35005283)
chr1 (18-51)||(46247953-46247986)
chr1 (16-48)||(10378738-10378770)
[»] chr3 (28 HSPs)
chr3 (16-53)||(39203636-39203673)
chr3 (16-51)||(13730602-13730637)
chr3 (16-51)||(24851301-24851336)
chr3 (16-49)||(353351-353384)
chr3 (18-51)||(516536-516569)
chr3 (18-51)||(4495676-4495709)
chr3 (18-51)||(5173719-5173752)
chr3 (18-51)||(10484616-10484649)
chr3 (18-51)||(13628790-13628823)
chr3 (18-51)||(40272812-40272845)
chr3 (18-51)||(40390365-40390398)
chr3 (18-51)||(47624223-47624256)
chr3 (18-51)||(54032571-54032604)
chr3 (18-51)||(54484815-54484848)
chr3 (16-51)||(1217210-1217245)
chr3 (16-51)||(14987081-14987116)
chr3 (16-51)||(30452917-30452952)
chr3 (16-51)||(31592969-31593004)
chr3 (16-51)||(49013473-49013508)
chr3 (18-51)||(14266372-14266405)
chr3 (18-51)||(23871490-23871523)
chr3 (18-51)||(25517170-25517203)
chr3 (18-51)||(26869830-26869863)
chr3 (18-51)||(43956472-43956505)
chr3 (19-52)||(45786213-45786246)
chr3 (18-51)||(52926219-52926252)
chr3 (18-50)||(22609889-22609921)
chr3 (16-52)||(31831308-31831344)
[»] chr8 (25 HSPs)
chr8 (16-51)||(6760924-6760959)
chr8 (16-51)||(20870025-20870060)
chr8 (18-51)||(10857931-10857964)
chr8 (18-51)||(12625992-12626025)
chr8 (19-52)||(23000227-23000260)
chr8 (18-51)||(27468092-27468125)
chr8 (18-51)||(35261781-35261814)
chr8 (18-51)||(39460994-39461027)
chr8 (16-52)||(16225121-16225157)
chr8 (16-52)||(17823676-17823712)
chr8 (16-51)||(7136527-7136562)
chr8 (16-51)||(25250624-25250659)
chr8 (16-51)||(26954235-26954270)
chr8 (16-51)||(30454097-30454132)
chr8 (18-51)||(16013558-16013591)
chr8 (18-47)||(18164764-18164793)
chr8 (18-51)||(26102619-26102652)
chr8 (18-51)||(28407505-28407538)
chr8 (18-51)||(28817626-28817659)
chr8 (18-51)||(29521685-29521718)
chr8 (18-51)||(35107311-35107344)
chr8 (18-51)||(44530251-44530284)
chr8 (16-52)||(23286336-23286372)
chr8 (18-50)||(27508012-27508044)
chr8 (18-50)||(45071366-45071398)
[»] chr7 (17 HSPs)
chr7 (16-51)||(42805626-42805661)
chr7 (18-51)||(36602549-36602582)
chr7 (18-54)||(2541016-2541052)
chr7 (18-50)||(29907520-29907552)
chr7 (16-52)||(47716561-47716597)
chr7 (16-52)||(48735121-48735157)
chr7 (16-51)||(21172009-21172044)
chr7 (16-51)||(31591109-31591144)
chr7 (16-51)||(32758359-32758394)
chr7 (16-51)||(42391100-42391135)
chr7 (20-51)||(44171637-44171668)
chr7 (16-54)||(10693070-10693108)
chr7 (18-51)||(7879740-7879773)
chr7 (18-51)||(38262196-38262229)
chr7 (18-51)||(45018923-45018956)
chr7 (14-50)||(16341377-16341413)
chr7 (18-50)||(18747589-18747621)
[»] chr5 (21 HSPs)
chr5 (16-51)||(41014418-41014453)
chr5 (18-51)||(16957416-16957449)
chr5 (18-51)||(32354229-32354262)
chr5 (18-51)||(38879685-38879718)
chr5 (16-52)||(13801766-13801802)
chr5 (18-50)||(29184062-29184094)
chr5 (19-51)||(43334307-43334339)
chr5 (16-51)||(4619104-4619139)
chr5 (16-51)||(16028624-16028659)
chr5 (16-51)||(32703522-32703557)
chr5 (16-51)||(35710411-35710446)
chr5 (18-52)||(16880646-16880680)
chr5 (18-52)||(30006427-30006461)
chr5 (16-54)||(30877561-30877599)
chr5 (16-49)||(11462925-11462958)
chr5 (18-51)||(24448992-24449025)
chr5 (18-51)||(25622562-25622595)
chr5 (18-47)||(39801618-39801647)
chr5 (19-51)||(10943845-10943877)
chr5 (18-50)||(12006329-12006361)
chr5 (16-52)||(34154813-34154849)
[»] scaffold0057 (1 HSPs)
scaffold0057 (18-51)||(46933-46966)
[»] scaffold0168 (1 HSPs)
scaffold0168 (16-51)||(30677-30712)
[»] scaffold0015 (1 HSPs)
scaffold0015 (16-51)||(48634-48669)
[»] scaffold0049 (1 HSPs)
scaffold0049 (18-52)||(59081-59115)
[»] scaffold0258 (1 HSPs)
scaffold0258 (18-51)||(13024-13057)
[»] scaffold0018 (1 HSPs)
scaffold0018 (18-51)||(72867-72900)
[»] scaffold0223 (1 HSPs)
scaffold0223 (16-52)||(11229-11265)


Alignment Details
Target: chr6 (Bit Score: 327; Significance: 0; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 19 - 423
Target Start/End: Original strand, 17432451 - 17432851
Alignment:
Q  19 atgcgggagctttagtgcaccgggttgccctttaaactttacaaccttgtatttattcctcatatcgatcatatattgctttgataccatcgatgaaact 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17432451 atgcgggagctttagtgcaccgggttgccctttaaactttacaaccttgtatttattcctcatatcgatcatatattgctttgataccatcaatgaaact 17432550  T
Q  119 ccacttataccgccatatatgnnnnnnnnnnnnnnnnnnnattacaagatattaccatttataatactaatcatctaaaagtatattatttaatccataa 218  Q
    |||||||||||||||||||||                   ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17432551 ccacttataccgccatatatgttttttttatttttt----attacaagatattaccatttataatactaattatctaaaagtatattatttaatccataa 17432646  T
Q  219 aaaatgaagaactagtggaatgtctgaagtgttggtatggaagttcttctgccaccaataggtagaaaagtcccattactccagtgtgctctttggtgtt 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17432647 aaaatgaagaactagtggaatgtctgaagtgttggtatggaagttcttctgccaccaataggtagaaaagtcccattactccagtgtggtctttggtgtt 17432746  T
Q  319 gttgtagttagattctagagttaaaatttcaccatcatttatcttgacagaacctggtttaggataacaagtagacattcctacaatgtaccctgcctca 418  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17432747 ggtgtagttagattctagagttaaaatttcaccatcatttatcttgacagaacctggtttaggataacaagtagacattcctacaatgtaccctgcctca 17432846  T
Q  419 tttcc 423  Q
    |||||    
T  17432847 tttcc 17432851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 200 - 434
Target Start/End: Original strand, 17453513 - 17453748
Alignment:
Q  200 tatattattta-atccataaaaaatgaagaactagtggaatgtctgaagtgttggtatggaagttcttctgccaccaataggtagaaaagtcccattact 298  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  17453513 tatattatttatatccataaaaaacgaagaacgagtggaatgtctgaagtgttggtatgggagttgttctgccaccaataggtagaaaagtcccattact 17453612  T
Q  299 ccagtgtgctctttggtgttgttgtagttagattctagagttaaaatttcaccatcatttatcttgacagaacctggtttaggataacaagtagacattc 398  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17453613 ccagtatgctctttggtgttgttgtagttagattcatgagttaaaatttcaccatcaattatcttgacagaacctggtttaggataacaagtagacattc 17453712  T
Q  399 ctacaatgtaccctgcctcatttcctgcttcttttc 434  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17453713 ctacaatgtaccctgcctcatttcctgcttcatttc 17453748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 17448425 - 17448538
Alignment:
Q  24 ggagctttagtgcaccgggttgccctttaaactttacaaccttgtatttattcctcatatcgatcatatattgctttgataccatcgatgaaactccact 123  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17448425 ggagttttagttcaccgagttgccctttaaactttacaaccttgtatttattcctcatatcgatcatacattgctttgataccatcgatgaaactccact 17448524  T
Q  124 tataccgccatata 137  Q
    |||||| |||||||    
T  17448525 tataccaccatata 17448538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 12892109 - 12892144
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  12892109 catatgcgggagctttagtgcaccgggttgcccttt 12892144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 6808497 - 6808530
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  6808497 tatgcgggagctttagtgcaccgggttgcccttt 6808530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 29355888 - 29355855
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  29355888 tatgcgggagctttagtgcaccgggttgcccttt 29355855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 1347062 - 1347097
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  1347062 catatgcgggagctctagtgcaccgggttgcccttt 1347097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 1354792 - 1354757
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  1354792 catatgcgggagctctagtgcaccgggttgcccttt 1354757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 25557823 - 25557858
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  25557823 catatgcgggagctctagtgcaccgggttgcccttt 25557858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 25997749 - 25997784
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  25997749 catatgcgggagctctagtgcaccgggttgcccttt 25997784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 26097258 - 26097293
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  26097258 catatgcgggagctctagtgcaccgggttgcccttt 26097293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 2166444 - 2166410
Alignment:
Q  17 atatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||| ||||||||||||||||||||||||||||||    
T  2166444 atattcgggagctttagtgcaccgggttgcccttt 2166410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 2178077 - 2178043
Alignment:
Q  17 atatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||| ||||||||||||||||||||||||||||||    
T  2178077 atattcgggagctttagtgcaccgggttgcccttt 2178043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 12886015 - 12886048
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||| |||||||||||||||||||||||||||||    
T  12886015 tatgtgggagctttagtgcaccgggttgcccttt 12886048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 13267827 - 13267860
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||| ||||||||||||||||||||    
T  13267827 tatgcgggagcttcagtgcaccgggttgcccttt 13267860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 23930160 - 23930127
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||| ||||||||||    
T  23930160 tatgcgggagctttagtgcaccgagttgcccttt 23930127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 47
Target Start/End: Complemental strand, 30786407 - 30786378
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcc 47  Q
    ||||||||||||||||||||||||||||||    
T  30786407 tatgcgggagctttagtgcaccgggttgcc 30786378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 434
Target Start/End: Original strand, 34210974 - 34211063
Alignment:
Q  345 tttcaccatcatttatcttgacagaacctggtttaggataacaagtagacattcctacaatgtaccctgcctcatttcctgcttcttttc 434  Q
    ||||||||||||  ||||| |  ||||||||||| ||||||||   |||||| || |||| ||| ||| ||||||| |||||||||||||    
T  34210974 tttcaccatcatcaatcttcattgaacctggttttggataacatacagacatcccaacaaggtaaccttcctcattccctgcttcttttc 34211063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 171; Significance: 1e-91; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 184 - 429
Target Start/End: Original strand, 38237089 - 38237335
Alignment:
Q  184 actaatcatctaaaagtatattattta-atccataaaaaatgaagaactagtggaatgtctgaagtgttggtatggaagttcttctgccaccaataggta 282  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||| || | ||||||||||||||||||    
T  38237089 actaattatctaaaagtatattatttatatccataaaaaatgaagaacgagtagaatgtctgaagtgttggtatgggagctgttctgccaccaataggta 38237188  T
Q  283 gaaaagtcccattactccagtgtgctctttggtgttgttgtagttagattctagagttaaaatttcaccatcatttatcttgacagaacctggtttagga 382  Q
    |||||||||||||||||| |||||||| |||||| ||||||||||||| |||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  38237189 gaaaagtcccattactccggtgtgctccttggtgctgttgtagttagactctagagttaaagtttcaccatcaataatcttgacagaacctggtttagga 38237288  T
Q  383 taacaagtagacattcctacaatgtaccctgcctcatttcctgcttc 429  Q
    |||||||| ||||||||||||||||| || || ||||||||||||||    
T  38237289 taacaagtggacattcctacaatgtatcccgcttcatttcctgcttc 38237335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 185 - 434
Target Start/End: Original strand, 38213186 - 38213436
Alignment:
Q  185 ctaatcatctaaaagtatattattta-atccataaaaaatgaagaactagtggaatgtctgaagtgttggtatggaagttcttctgccaccaataggtag 283  Q
    ||||| ||||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  38213186 ctaattatctaaaagcatattatttatatccataaaaaatgaagaacgagtagaatgtctgaagtgttggtatgggagttgttctgccaccaataagtag 38213285  T
Q  284 aaaagtcccattactccagtgtgctctttggtgttgttgtagttagattctagagttaaaatttcaccatcatttatcttgacagaacctggtttaggat 383  Q
    |||||||||||||||||||||||||| ||| ||||| ||||||||||  ||||||| ||| ||||||||||| | |||||||||||||||||||||||||    
T  38213286 aaaagtcccattactccagtgtgctccttgctgttgctgtagttagacactagagtcaaagtttcaccatcaataatcttgacagaacctggtttaggat 38213385  T
Q  384 aacaagtagacattcctacaatgtaccctgcctcatttcctgcttcttttc 434  Q
    |||| || |||||||||||||| ||   |||||||||||||||||| ||||    
T  38213386 aacatgtggacattcctacaatatagtttgcctcatttcctgcttcatttc 38213436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 184 - 434
Target Start/End: Original strand, 38225670 - 38225921
Alignment:
Q  184 actaatcatctaaaagtatattattta-atccataaaaaatgaagaactagtggaatgtctgaagtgttggtatggaagttcttctgccaccaataggta 282  Q
    |||||| ||||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||||||||| | ||| || | |||||||||||| | |||    
T  38225670 actaattatctaaaagcatattatttatatccataaaaaatgaagaacgagtagaatgtctgaagtgttgatctgggagctgttctgccaccaacaagta 38225769  T
Q  283 gaaaagtcccattactccagtgtgctctttggtgttgttgtagttagattctagagttaaaatttcaccatcatttatcttgacagaacctggtttagga 382  Q
    ||||||||||||||||||||||||||| |||||| || ||||||||||  ||||||||||| |||||||||||  |||||||||||||||||||||||||    
T  38225770 gaaaagtcccattactccagtgtgctccttggtgctgctgtagttagacactagagttaaagtttcaccatcaactatcttgacagaacctggtttagga 38225869  T
Q  383 taacaagtagacattcctacaatgtaccctgcctcatttcctgcttcttttc 434  Q
    ||||| || ||||||||||||||||| |||| |||||| || ||||| ||||    
T  38225870 taacatgtggacattcctacaatgtagcctgtctcattcccagcttcatttc 38225921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 248 - 434
Target Start/End: Original strand, 38247616 - 38247802
Alignment:
Q  248 tgttggtatggaagttcttctgccaccaataggtagaaaagtcccattactccagtgtgctctttggtgttgttgtagttagattctagagttaaaattt 347  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||| |||||| |||    
T  38247616 tgttggtatgggagttgttctgccaccaataggtagaaaagtcccattactccagtgtgctccctggtgctgttgtagttagactctagggttaaagttt 38247715  T
Q  348 caccatcatttatcttgacagaacctggtttaggataacaagtagacattcctacaatgtaccctgcctcatttcctgcttcttttc 434  Q
    |||||||| | ||||||||||||||||||||||||||||| || |||||||||||||| ||   |||||||||||||||||| ||||    
T  38247716 caccatcaataatcttgacagaacctggtttaggataacatgtggacattcctacaatataggttgcctcatttcctgcttcatttc 38247802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 211 - 434
Target Start/End: Original strand, 38219611 - 38219834
Alignment:
Q  211 atccataaaaaatgaagaactagtggaatgtctgaagtgttggtatggaagttcttctgccaccaataggtagaaaagtcccattactccagtgtgctct 310  Q
    ||||||||||||||||||||  || ||||||||||||||||| | ||| |||| ||||||||||||||||||||||||||||||||| ||| |||| |||    
T  38219611 atccataaaaaatgaagaacgggtagaatgtctgaagtgttgatctgggagttgttctgccaccaataggtagaaaagtcccattacaccattgtgttct 38219710  T
Q  311 ttggtgttgttgtagttagattctagagttaaaatttcaccatcatttatcttgacagaacctggtttaggataacaagtagacattcctacaatgtacc 410  Q
    | | | ||||||||| ||||  ||| ||||||| ||||||||||| | ||||||| ||||||||||||||||||||| || ||||||||||||||||| |    
T  38219711 tggctattgttgtagatagagactaaagttaaagtttcaccatcaataatcttgatagaacctggtttaggataacatgtggacattcctacaatgtagc 38219810  T
Q  411 ctgcctcatttcctgcttcttttc 434  Q
    ||| ||||||||| ||||| ||||    
T  38219811 ctgtctcatttccagcttcgtttc 38219834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 248 - 429
Target Start/End: Original strand, 38252647 - 38252828
Alignment:
Q  248 tgttggtatggaagttcttctgccaccaataggtagaaaagtcccattactccagtgtgctctttggtgttgttgtagttagattctagagttaaaattt 347  Q
    ||||| ||||| || | |||||||||||||| ||||||||| ||||||||||| |||||||| |||||| ||||||||||||| |||||||| ||| |||    
T  38252647 tgttgatatgggagctgttctgccaccaatatgtagaaaagccccattactccggtgtgctccttggtgctgttgtagttagactctagagtcaaagttt 38252746  T
Q  348 caccatcatttatcttgacagaacctggtttaggataacaagtagacattcctacaatgtaccctgcctcatttcctgcttc 429  Q
    |||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||||||| ||||  ||||||||||||||    
T  38252747 caccatcaattatcttaacagaacctggtttaggataacatgtggacattcctacaatgtagcctgattcatttcctgcttc 38252828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 265 - 429
Target Start/End: Original strand, 38242371 - 38242535
Alignment:
Q  265 ttctgccaccaataggtagaaaagtcccattactccagtgtgctctttggtgttgttgtagttagattctagagttaaaatttcaccatcatttatcttg 364  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||| | | |||||||||||||| |||||||||||| ||||||||||| | ||||||    
T  38242371 ttctgccaccaataggtagaaaaatcccattacaccagtgtgttcttggctattgttgtagttagactctagagttaaagtttcaccatcaataatcttg 38242470  T
Q  365 acagaacctggtttaggataacaagtagacattcctacaatgtaccctgcctcatttcctgcttc 429  Q
    |  |||||||||||||||||||| || ||||||||||||||||| ||  | ||||||||||||||    
T  38242471 attgaacctggtttaggataacatgtggacattcctacaatgtatcccacttcatttcctgcttc 38242535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 20225176 - 20225212
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||||||||||||||||||||||||||||||||||||    
T  20225176 catatgcgggagctttagtgcaccgggttgcccttta 20225212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 11394954 - 11394989
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgccctttaa 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  11394954 tatgcgggagctttagtgcaccgggttgccctttaa 11394989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 11404681 - 11404716
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgccctttaa 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  11404681 tatgcgggagctttagtgcaccgggttgccctttaa 11404716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 16408636 - 16408601
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  16408636 catatgcgggagctttagtgcaccgggttgcccttt 16408601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 23501889 - 23501924
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  23501889 catatgcgggagctttagtgcaccgggttgcccttt 23501924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 25629149 - 25629184
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  25629149 catatgcgggagctttagtgcaccgggttgcccttt 25629184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 32484333 - 32484368
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  32484333 catatgcgggagctttagtgcaccgggttgcccttt 32484368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 38755941 - 38755906
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgccctttaa 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  38755941 tatgcgggagctttagtgcaccgggttgccctttaa 38755906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 40553970 - 40553935
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgccctttaa 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  40553970 tatgcgggagctttagtgcaccgggttgccctttaa 40553935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 8473655 - 8473621
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgccctt 50  Q
    |||||||||||||||||||||||||||||||||||    
T  8473655 catatgcgggagctttagtgcaccgggttgccctt 8473621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 38213103 - 38213168
Alignment:
Q  64 cttgtatttattcctcat--atcgatcatatattgctttgataccatcgatgaaactccacttata 127  Q
    |||||||||||||||| |  ||| |||||||||| |||||| |||||| |||||||||||||||||    
T  38213103 cttgtatttattcctctttgatcaatcatatattactttgacaccatccatgaaactccacttata 38213168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 44363163 - 44363129
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||||||||||||||||||||||||||||||||||    
T  44363163 tatgcgggagctttagtgcaccgggttgcccttta 44363129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 56323001 - 56323035
Alignment:
Q  17 atatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||||||||||||||||||    
T  56323001 atatgcgggagctttagtgcaccgggttgcccttt 56323035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 20639691 - 20639658
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  20639691 tatgcgggagctttagtgcaccgggttgcccttt 20639658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 35532094 - 35532127
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  35532094 tatgcgggagctttagtgcaccgggttgcccttt 35532127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 38242315 - 38242371
Alignment:
Q  184 actaatcatctaaaagtatattatttaatccataaaaaatgaagaactagtggaatgt 241  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||| ||| ||||||    
T  38242315 actaattatctaaaagtatattattt-gtccataaaaaatgaagaacgagtagaatgt 38242371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 21647066 - 21647098
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgccc 48  Q
    |||||||||||||||||||||||||||||||||    
T  21647066 catatgcgggagctttagtgcaccgggttgccc 21647098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 11054183 - 11054148
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  11054183 catatgcgggagctctagtgcaccgggttgcccttt 11054148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Complemental strand, 13256430 - 13256399
Alignment:
Q  20 tgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||    
T  13256430 tgcgggagctttagtgcaccgggttgcccttt 13256399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 20225082 - 20225117
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  20225082 catatgcgggagctctagtgcaccgggttgcccttt 20225117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 30639479 - 30639514
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||| ||||||||||||    
T  30639479 catatgcgggagctttagtgcactgggttgcccttt 30639514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 38786709 - 38786744
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  38786709 catatgcgggagctctagtgcaccgggttgcccttt 38786744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 54175165 - 54175200
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||| ||||||||    
T  54175165 catatgcgggagctttagtgcaccgggctgcccttt 54175200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 19028013 - 19028046
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||| ||||||||    
T  19028013 tatgcgggagctttagtgcaccgggctgcccttt 19028046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 29207933 - 29207900
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgccct 49  Q
    |||||||||||||| |||||||||||||||||||    
T  29207933 catatgcgggagctctagtgcaccgggttgccct 29207900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 30352613 - 30352580
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||| ||||||||||    
T  30352613 tatgcgggagctttagtgcaccgtgttgcccttt 30352580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 33836520 - 33836487
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||| |||||||||||||    
T  33836520 tatgcgggagctttagtgcaacgggttgcccttt 33836487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 36816417 - 36816384
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||| |||||||||||||||    
T  36816417 tatgcgggagctttagtgtaccgggttgcccttt 36816384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 38237033 - 38237074
Alignment:
Q  86 atcatatattgctttgataccatcgatgaaactccacttata 127  Q
    |||||||||| |||||| |||||| |||||||||||||||||    
T  38237033 atcatatattactttgacaccatccatgaaactccacttata 38237074  T

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Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 6430659 - 6430627
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgccctt 50  Q
    |||||||||||||||| ||||||||||||||||    
T  6430659 tatgcgggagctttagcgcaccgggttgccctt 6430627  T

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Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 429
Target Start/End: Complemental strand, 11463422 - 11463326
Alignment:
Q  333 ctagagttaaaatttcaccatcatttatcttgacagaacctggtttaggataacaagtagacattcctacaatgtaccctgcctcatttcctgcttc 429  Q
    |||| ||||||||||||||||||  || ||||| ||||||||||||||| |||||||| |||||||||||||  ||||||  |||||||||||||||    
T  11463422 ctagtgttaaaatttcaccatcaaataacttgatagaacctggtttagggtaacaagttgacattcctacaacataccctttctcatttcctgcttc 11463326  T

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Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 428
Target Start/End: Complemental strand, 11475383 - 11475220
Alignment:
Q  265 ttctgccaccaataggtagaaaagtcccattactccagtgtgctctttggtgttgttgtagttagattctagagttaaaatttcaccatcatttatcttg 364  Q
    |||||||||||| |  |||||||||||||||||||||| |||   | || || |  ||||||||   ||||  |||||| | |||||||||  |||||||    
T  11475383 ttctgccaccaagaaatagaaaagtcccattactccagagtgacttatgttgctactgtagttactctctaatgttaaagtctcaccatcaaatatcttg 11475284  T
Q  365 acagaacctggtttaggataacaagtagacattcctacaatgtaccctgcctcatttcctgctt 428  Q
    | ||||||||||||||| ||||| || |||||||||||||| ||||||  ||||||||||||||    
T  11475283 atagaacctggtttagggtaacatgttgacattcctacaatataccctttctcatttcctgctt 11475220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 260 - 426
Target Start/End: Complemental strand, 11480799 - 11480633
Alignment:
Q  260 agttcttctgccaccaataggtagaaaagtcccattactccagtgtgctctt-tggtgttgttgtagttagattctagagttaaaatttcaccatcattt 358  Q
    |||| |||||||||||| |  |||||||| ||||| ||||||| ||  |||| || || || ||| |||||  |||| |||||||||||||||||||  |    
T  11480799 agtttttctgccaccaagaaatagaaaagccccatcactccagagta-tcttatgttgctgctgtggttagcctctaaagttaaaatttcaccatcaaat 11480701  T
Q  359 atcttgacagaacctggtttaggataacaagtagacattcctacaatgtaccctgcctcatttcctgc 426  Q
    ||||||| |||||||||| |||| |||||||| |||||||||||||  ||||||  ||||| ||||||    
T  11480700 atcttgatagaacctggtatagggtaacaagttgacattcctacaacataccctttctcatctcctgc 11480633  T

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Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 265 - 427
Target Start/End: Complemental strand, 11486616 - 11486454
Alignment:
Q  265 ttctgccaccaataggtagaaaagtcccattactccagtgtgctctt-tggtgttgttgtagttagattctagagttaaaatttcaccatcatttatctt 363  Q
    |||||||||||| |  |||||||||||||||||||||| ||| |||| || || |  |||||||||  ||||  |||||| |||||||||||  ||||||    
T  11486616 ttctgccaccaagaaatagaaaagtcccattactccagagtg-tcttatgttgctactgtagttagtctctaatgttaaattttcaccatcaaatatctt 11486518  T
Q  364 gacagaacctggtttaggataacaagtagacattcctacaatgtaccctgcctcatttcctgct 427  Q
    || ||||||||||||||| ||||| || ||||| |||||||  || |||  |||||||||||||    
T  11486517 gatagaacctggtttagggtaacatgttgacatgcctacaacatatcctttctcatttcctgct 11486454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 14530422 - 14530456
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||||||||||||||||||||||||||||||||||    
T  14530422 tatgcgggagctttagtgcaccgggttgcccttta 14530456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 9671281 - 9671314
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  9671281 tatgcgggagctttagtgcaccgggttgcccttt 9671314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 10543802 - 10543835
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  10543802 tatgcgggagctttagtgcaccgggttgcccttt 10543835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 10546265 - 10546298
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  10546265 tatgcgggagctttagtgcaccgggttgcccttt 10546298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 22371214 - 22371247
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  22371214 tatgcgggagctttagtgcaccgggttgcccttt 22371247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 25632611 - 25632644
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  25632611 tatgcgggagctttagtgcaccgggttgcccttt 25632644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 36871593 - 36871626
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  36871593 tatgcgggagctttagtgcaccgggttgcccttt 36871626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 23397864 - 23397900
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||||||||||||| ||||||||||||||||||||||    
T  23397864 catatgcgggagctctagtgcaccgggttgcccttta 23397900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 40416906 - 40416870
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||||||| ||||||||||||||||||||||||||||    
T  40416906 catatgcgagagctttagtgcaccgggttgcccttta 40416870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 40579782 - 40579750
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgccctt 50  Q
    |||||||||||||||||||||||||||||||||    
T  40579782 tatgcgggagctttagtgcaccgggttgccctt 40579750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 3633743 - 3633708
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||| ||||||||||    
T  3633743 catatgcgggagctttagtgcaccgagttgcccttt 3633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 5841130 - 5841165
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||| ||||||||||    
T  5841130 catatgcgggagctttagtgcaccgagttgcccttt 5841165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 21779296 - 21779261
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  21779296 catatgcgggagctctagtgcaccgggttgcccttt 21779261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 34080201 - 34080236
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||| |||||||||||||||||||||||    
T  34080201 catatgcgggagttttagtgcaccgggttgcccttt 34080236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 47
Target Start/End: Complemental strand, 124947 - 124918
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcc 47  Q
    ||||||||||||||||||||||||||||||    
T  124947 tatgcgggagctttagtgcaccgggttgcc 124918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 8455349 - 8455316
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||| ||||||||||||||||||||||||||||    
T  8455349 tatgccggagctttagtgcaccgggttgcccttt 8455316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 11514537 - 11514570
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||||||| |||||||||    
T  11514537 tatgcgggagctttagtgcaccggattgcccttt 11514570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 14444830 - 14444863
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||||| |||||||||||    
T  14444830 tatgcgggagctttagtgcaccaggttgcccttt 14444863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 25249771 - 25249738
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||| |||||||||||||||||||||||||||    
T  25249771 tatgcgtgagctttagtgcaccgggttgcccttt 25249738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 39914339 - 39914306
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||| |||||||||||||    
T  39914339 tatgcgggagctttagtgcatcgggttgcccttt 39914306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 40762267 - 40762234
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||| |||||||||||||||||||||||||||||    
T  40762267 tatgtgggagctttagtgcaccgggttgcccttt 40762234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 41409962 - 41409995
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgccct 49  Q
    ||||||||||||||| ||||||||||||||||||    
T  41409962 catatgcgggagcttcagtgcaccgggttgccct 41409995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 17668109 - 17668137
Alignment:
Q  23 gggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||||||||||||    
T  17668109 gggagctttagtgcaccgggttgcccttt 17668137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 434
Target Start/End: Complemental strand, 49184 - 49034
Alignment:
Q  284 aaaagtcccattactccagtgtgctctt-tggtgttgttgtagttagattctagagttaaaatttcaccatcatttatcttgacagaacctggtttagga 382  Q
    ||||| ||||||||||||| ||| |||| || ||||||| |||||    |||||||||||| ||||||||| |  |||||||| ||||||||||| ||||    
T  49184 aaaagccccattactccagagtg-tcttctgctgttgttatagttcacctctagagttaaagtttcaccattaaatatcttgatagaacctggttgagga 49086  T
Q  383 taacaagtagacattcctacaatgtaccctgcctcatttcctgcttcttttc 434  Q
    |||||||| |||||||||||||  || |||   |||||||||||||| ||||    
T  49085 taacaagtggacattcctacaacatatcctttttcatttcctgcttcctttc 49034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 248 - 434
Target Start/End: Complemental strand, 21548038 - 21547852
Alignment:
Q  248 tgttggtatggaagttcttctgccaccaataggtagaaaagtcccattactccagtgtgctctt-tggtgttgttgtagttagattctagagttaaaatt 346  Q
    ||||||| ||| || | |||||||||||| |  || ||||| ||||||||||||| ||| |||| || ||||||| |||||    |||||| ||||| ||    
T  21548038 tgttggtgtggtagcttttctgccaccaagaaataaaaaagccccattactccagagtg-tcttctgctgttgttatagttcacctctagaattaaagtt 21547940  T
Q  347 tcaccatcatttatcttgacagaacctggtttaggataacaagtagacattcctacaatgtaccctgcctcatttcctgcttcttttc 434  Q
    ||||||| |  |||||||| ||||||||||| |||||||||||| | |||||||||||  ||||||   |||||||||||||| ||||    
T  21547939 tcaccattaagtatcttgatagaacctggttgaggataacaagtggtcattcctacaacataccctttttcatttcctgcttcctttc 21547852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 20004125 - 20004090
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  20004125 catatgcgggagctttagtgcaccgggttgcccttt 20004090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 50606526 - 50606561
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  50606526 catatgcgggagctttagtgcaccgggttgcccttt 50606561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 4349763 - 4349797
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||||||||||||||||||||||||||||||||||    
T  4349763 tatgcgggagctttagtgcaccgggttgcccttta 4349797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 10668352 - 10668385
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  10668352 tatgcgggagctttagtgcaccgggttgcccttt 10668385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 14617161 - 14617196
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||| ||||||    
T  14617161 catatgcgggagctttagtgcaccgggttacccttt 14617196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 19414560 - 19414595
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  19414560 catatgcgggagctctagtgcaccgggttgcccttt 19414595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 30395761 - 30395726
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||| ||||||||||    
T  30395761 catatgcgggagctttagtgcaccgagttgcccttt 30395726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 34725133 - 34725098
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  34725133 catatgcgggagctctagtgcaccgggttgcccttt 34725098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 38478317 - 38478282
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  38478317 catatgcgggagctctagtgcaccgggttgcccttt 38478282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 48
Target Start/End: Original strand, 45402221 - 45402251
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgccc 48  Q
    |||||||||||||||||||||||||||||||    
T  45402221 tatgcgggagctttagtgcaccgggttgccc 45402251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 1517344 - 1517311
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||| ||||||||||||||||||||||||||||    
T  1517344 tatgcaggagctttagtgcaccgggttgcccttt 1517311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 9939589 - 9939622
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||| ||||||    
T  9939589 tatgcgggagctttagtgcaccgggttacccttt 9939622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 27474405 - 27474438
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||||||| |||||||||    
T  27474405 tatgcgggagctttagtgcaccggattgcccttt 27474438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 35005250 - 35005283
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||| |||||||||||||||||||||||||    
T  35005250 tatgcgggcgctttagtgcaccgggttgcccttt 35005283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 46247986 - 46247953
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||| |||||||||||||||    
T  46247986 tatgcgggagctttagtgtaccgggttgcccttt 46247953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 10378770 - 10378738
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgccc 48  Q
    ||||||||||||||||||||||||||| |||||    
T  10378770 catatgcgggagctttagtgcaccgggctgccc 10378738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 39203636 - 39203673
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgccctttaa 53  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39203636 catatgcgggagctttagtgcaccgggttgccctttaa 39203673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 13730637 - 13730602
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  13730637 catatgcgggagctttagtgcaccgggttgcccttt 13730602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 24851336 - 24851301
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  24851336 catatgcgggagctttagtgcaccgggttgcccttt 24851301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 353384 - 353351
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgccct 49  Q
    ||||||||||||||||||||||||||||||||||    
T  353384 catatgcgggagctttagtgcaccgggttgccct 353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 516536 - 516569
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  516536 tatgcgggagctttagtgcaccgggttgcccttt 516569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 4495709 - 4495676
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  4495709 tatgcgggagctttagtgcaccgggttgcccttt 4495676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 5173752 - 5173719
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  5173752 tatgcgggagctttagtgcaccgggttgcccttt 5173719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 10484649 - 10484616
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  10484649 tatgcgggagctttagtgcaccgggttgcccttt 10484616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 13628823 - 13628790
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  13628823 tatgcgggagctttagtgcaccgggttgcccttt 13628790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 40272845 - 40272812
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  40272845 tatgcgggagctttagtgcaccgggttgcccttt 40272812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 40390365 - 40390398
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  40390365 tatgcgggagctttagtgcaccgggttgcccttt 40390398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 47624223 - 47624256
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  47624223 tatgcgggagctttagtgcaccgggttgcccttt 47624256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 54032604 - 54032571
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  54032604 tatgcgggagctttagtgcaccgggttgcccttt 54032571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 54484815 - 54484848
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  54484815 tatgcgggagctttagtgcaccgggttgcccttt 54484848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 1217210 - 1217245
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  1217210 catatgcgggagctctagtgcaccgggttgcccttt 1217245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 14987081 - 14987116
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||| ||||||    
T  14987081 catatgcgggagctttagtgcaccgggtttcccttt 14987116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 30452917 - 30452952
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  30452917 catatgcgggagctctagtgcaccgggttgcccttt 30452952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 31592969 - 31593004
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  31592969 catatgcgggagctctagtgcaccgggttgcccttt 31593004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 49013508 - 49013473
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||| |||||||||||||||||||||||||||||||    
T  49013508 catacgcgggagctttagtgcaccgggttgcccttt 49013473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 14266405 - 14266372
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||| ||||||||||||    
T  14266405 tatgcgggagctttagtgcactgggttgcccttt 14266372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 23871490 - 23871523
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||| ||||||||||||||||||||||||    
T  23871490 tatgcgggaactttagtgcaccgggttgcccttt 23871523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 25517203 - 25517170
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||| ||||||||||||||||||||||||||||    
T  25517203 tatgctggagctttagtgcaccgggttgcccttt 25517170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 26869830 - 26869863
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||    
T  26869830 tatgcgggagctttggtgcaccgggttgcccttt 26869863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 43956505 - 43956472
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||| ||||||||    
T  43956505 tatgcgggagctttagtgcaccgggctgcccttt 43956472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 45786246 - 45786213
Alignment:
Q  19 atgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||| |||||||||||||||||||||||||||||    
T  45786246 atgctggagctttagtgcaccgggttgcccttta 45786213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 52926252 - 52926219
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||| |||||||||||||||||    
T  52926252 tatgcgggagctttagcgcaccgggttgcccttt 52926219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 22609889 - 22609921
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgccctt 50  Q
    ||||||||||||| |||||||||||||||||||    
T  22609889 tatgcgggagcttcagtgcaccgggttgccctt 22609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 31831308 - 31831344
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  31831308 catatgcgggtgctctagtgcaccgggttgcccttta 31831344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 6760924 - 6760959
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  6760924 catatgcgggagctttagtgcaccgggttgcccttt 6760959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 20870025 - 20870060
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  20870025 catatgcgggagctttagtgcaccgggttgcccttt 20870060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 10857931 - 10857964
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  10857931 tatgcgggagctttagtgcaccgggttgcccttt 10857964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 12625992 - 12626025
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  12625992 tatgcgggagctttagtgcaccgggttgcccttt 12626025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 23000260 - 23000227
Alignment:
Q  19 atgcgggagctttagtgcaccgggttgcccttta 52  Q
    ||||||||||||||||||||||||||||||||||    
T  23000260 atgcgggagctttagtgcaccgggttgcccttta 23000227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 27468125 - 27468092
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  27468125 tatgcgggagctttagtgcaccgggttgcccttt 27468092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 35261781 - 35261814
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  35261781 tatgcgggagctttagtgcaccgggttgcccttt 35261814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 39461027 - 39460994
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  39461027 tatgcgggagctttagtgcaccgggttgcccttt 39460994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 16225121 - 16225157
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||||||||||||||||||||||||||||| ||||||    
T  16225121 catatgcgggagctttagtgcaccgggttgtccttta 16225157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 17823676 - 17823712
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttta 52  Q
    ||||||| |||||||||||||||||||||||||||||    
T  17823676 catatgcaggagctttagtgcaccgggttgcccttta 17823712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 7136562 - 7136527
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||| ||||||    
T  7136562 catatgcgggagctttagtgcaccgggttacccttt 7136527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 25250624 - 25250659
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||| |||||||||||||||||||||||    
T  25250624 catatgcgggagatttagtgcaccgggttgcccttt 25250659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 26954235 - 26954270
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||| ||||||||||||    
T  26954235 catatgcgggagctttagtgcactgggttgcccttt 26954270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 30454132 - 30454097
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  30454132 catatgcgggagctctagtgcaccgggttgcccttt 30454097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 16013558 - 16013591
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||||||||||| |||||    
T  16013558 tatgcgggagctttagtgcaccgggttgtccttt 16013591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 47
Target Start/End: Complemental strand, 18164793 - 18164764
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcc 47  Q
    ||||||||||||||||||||||||||||||    
T  18164793 tatgcgggagctttagtgcaccgggttgcc 18164764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 26102619 - 26102652
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||| |||||||||||||||||||||    
T  26102619 tatgcgggagctctagtgcaccgggttgcccttt 26102652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 28407505 - 28407538
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||| ||||||||||||||||||    
T  28407505 tatgcgggagctttactgcaccgggttgcccttt 28407538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 28817659 - 28817626
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||| |||||||||||||    
T  28817659 tatgcgggagctttagtgcatcgggttgcccttt 28817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 29521718 - 29521685
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||| ||||    
T  29521718 tatgcgggagctttagtgcaccgggttgctcttt 29521685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 35107344 - 35107311
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||| ||||||||||||||||||||||||||    
T  35107344 tatgcggaagctttagtgcaccgggttgcccttt 35107311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 44530251 - 44530284
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||||||||||| |||||    
T  44530251 tatgcgggagctttagtgcaccgggttgaccttt 44530284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 23286372 - 23286336
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||||||||||||| |||||||||||| |||||||||    
T  23286372 catatgcgggagctctagtgcaccgggctgcccttta 23286336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 27508012 - 27508044
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgccctt 50  Q
    |||||||||||||||||||||||||||| ||||    
T  27508012 tatgcgggagctttagtgcaccgggttgtcctt 27508044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 45071366 - 45071398
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgccctt 50  Q
    ||||||||||||| |||||||||||||||||||    
T  45071366 tatgcgggagcttcagtgcaccgggttgccctt 45071398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 42805626 - 42805661
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  42805626 catatgcgggagctttagtgcaccgggttgcccttt 42805661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 36602549 - 36602582
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  36602549 tatgcgggagctttagtgcaccgggttgcccttt 36602582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 2541052 - 2541016
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgccctttaaa 54  Q
    ||||||||||||||||||||||||||| |||||||||    
T  2541052 tatgcgggagctttagtgcaccgggtttccctttaaa 2541016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 29907520 - 29907552
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgccctt 50  Q
    |||||||||||||||||||||||||||||||||    
T  29907520 tatgcgggagctttagtgcaccgggttgccctt 29907552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 47716561 - 47716597
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||||||||||||||| ||||||||||||||||||||    
T  47716561 catatgcgggagctttggtgcaccgggttgcccttta 47716597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 48735157 - 48735121
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||||||||||||| ||||||||||||||||||||||    
T  48735157 catatgcgggagctctagtgcaccgggttgcccttta 48735121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 21172044 - 21172009
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  21172044 catatgcgggagctctagtgcaccgggttgcccttt 21172009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 31591144 - 31591109
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  31591144 catatgcgggagctctagtgcaccgggttgcccttt 31591109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 32758359 - 32758394
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  32758359 catatgcgggagctctagtgcaccgggttgcccttt 32758394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 42391135 - 42391100
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  42391135 catatgcgggagctctagtgcaccgggttgcccttt 42391100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Complemental strand, 44171668 - 44171637
Alignment:
Q  20 tgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||    
T  44171668 tgcgggagctttagtgcaccgggttgcccttt 44171637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 10693108 - 10693070
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgccctttaaa 54  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  10693108 catatgcgggagctctagtgcactgggttgccctttaaa 10693070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 7879740 - 7879773
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||| ||||||||||||||||||||    
T  7879740 tatgcgggagcttcagtgcaccgggttgcccttt 7879773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 38262229 - 38262196
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||||||| |||||||||    
T  38262229 tatgcgggagctttagtgcaccggattgcccttt 38262196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 45018956 - 45018923
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||||| |||||||||||    
T  45018956 tatgcgggagctttagtgcaccaggttgcccttt 45018923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 16341377 - 16341413
Alignment:
Q  14 atcatatgcgggagctttagtgcaccgggttgccctt 50  Q
    |||||||||||||||||| |||||||||| |||||||    
T  16341377 atcatatgcgggagctttggtgcaccgggctgccctt 16341413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 18747589 - 18747621
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgccctt 50  Q
    ||||||||||||||||||||||||| |||||||    
T  18747589 tatgcgggagctttagtgcaccgggctgccctt 18747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 41014418 - 41014453
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  41014418 catatgcgggagctttagtgcaccgggttgcccttt 41014453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 16957416 - 16957449
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  16957416 tatgcgggagctttagtgcaccgggttgcccttt 16957449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 32354229 - 32354262
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  32354229 tatgcgggagctttagtgcaccgggttgcccttt 32354262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 38879685 - 38879718
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  38879685 tatgcgggagctttagtgcaccgggttgcccttt 38879718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 13801802 - 13801766
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||||||| ||||||||||||||||||||||||||||    
T  13801802 catatgcgagagctttagtgcaccgggttgcccttta 13801766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 29184094 - 29184062
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgccctt 50  Q
    |||||||||||||||||||||||||||||||||    
T  29184094 tatgcgggagctttagtgcaccgggttgccctt 29184062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 43334307 - 43334339
Alignment:
Q  19 atgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||||||||||||||||    
T  43334307 atgcgggagctttagtgcaccgggttgcccttt 43334339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 4619139 - 4619104
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||| |||||||||||||||||||||||||||    
T  4619139 catatgcgagagctttagtgcaccgggttgcccttt 4619104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 16028659 - 16028624
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  16028659 catatgcgggagctctagtgcaccgggttgcccttt 16028624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 32703522 - 32703557
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  32703522 catatgcgggagctctagtgcaccgggttgcccttt 32703557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 35710411 - 35710446
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  35710411 catatgcgggagctctagtgcaccgggttgcccttt 35710446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 16880680 - 16880646
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttta 52  Q
    ||||||||||||||||||||||||||| |||||||    
T  16880680 tatgcgggagctttagtgcaccgggtttcccttta 16880646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 30006427 - 30006461
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||||||||||||||||||||||||||||| ||||    
T  30006427 tatgcgggagctttagtgcaccgggttgcctttta 30006461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 30877599 - 30877561
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgccctttaaa 54  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  30877599 catatgtgggagctctagtgcaccgggttgccctttaaa 30877561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 11462925 - 11462958
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgccct 49  Q
    |||||||||||||| |||||||||||||||||||    
T  11462925 catatgcgggagctctagtgcaccgggttgccct 11462958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 24448992 - 24449025
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||| ||||||||||||||||||||||||||||    
T  24448992 tatgcaggagctttagtgcaccgggttgcccttt 24449025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 25622562 - 25622595
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||||||| |||||||||    
T  25622562 tatgcgggagctttagtgcaccggattgcccttt 25622595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 47
Target Start/End: Original strand, 39801618 - 39801647
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcc 47  Q
    ||||||||||||||||||||||||||||||    
T  39801618 tatgcgggagctttagtgcaccgggttgcc 39801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 10943877 - 10943845
Alignment:
Q  19 atgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||||||| ||||||||    
T  10943877 atgcgggagctttagtgcaccgggctgcccttt 10943845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 12006361 - 12006329
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgccctt 50  Q
    ||||||||||||||||||||||| |||||||||    
T  12006361 tatgcgggagctttagtgcaccgtgttgccctt 12006329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 34154849 - 34154813
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttta 52  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  34154849 catatgcggtagctctagtgcaccgggttgcccttta 34154813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 46933 - 46966
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  46933 tatgcgggagctttagtgcaccgggttgcccttt 46966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 30677 - 30712
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  30677 catatgcgggagctctagtgcaccgggttgcccttt 30712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 48669 - 48634
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||| |||||||||||||||||||||    
T  48669 catatgcgggagctctagtgcaccgggttgcccttt 48634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 59081 - 59115
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||||||||||||||||||| ||||||||||||||    
T  59081 tatgcgggagctttagtgcatcgggttgcccttta 59115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 13057 - 13024
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||| |||||||||||||||||||||||||    
T  13057 tatgcgggggctttagtgcaccgggttgcccttt 13024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 72900 - 72867
Alignment:
Q  18 tatgcgggagctttagtgcaccgggttgcccttt 51  Q
    |||||||||||||||||||||| |||||||||||    
T  72900 tatgcgggagctttagtgcaccaggttgcccttt 72867  T

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Target: scaffold0223 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 11229 - 11265
Alignment:
Q  16 catatgcgggagctttagtgcaccgggttgcccttta 52  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  11229 catatgcgggagctctagtgcaccaggttgcccttta 11265  T

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