View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13764_high_15 (Length: 471)

Name: NF13764_high_15
Description: NF13764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13764_high_15
NF13764_high_15
[»] chr7 (8 HSPs)
chr7 (52-446)||(3703867-3704264)
chr7 (52-283)||(3696490-3696729)
chr7 (338-400)||(3695351-3695413)
chr7 (10-52)||(32706547-32706589)
chr7 (12-51)||(9595340-9595379)
chr7 (12-51)||(9646303-9646342)
chr7 (411-445)||(3675975-3676009)
chr7 (337-396)||(3650517-3650577)
[»] chr3 (2 HSPs)
chr3 (10-51)||(5553679-5553720)
chr3 (10-48)||(23433224-23433262)
[»] scaffold0146 (3 HSPs)
scaffold0146 (14-51)||(6826-6863)
scaffold0146 (10-49)||(9717-9756)
scaffold0146 (10-49)||(17384-17423)
[»] chr8 (1 HSPs)
chr8 (10-51)||(20731081-20731122)
[»] chr4 (7 HSPs)
chr4 (10-51)||(20264941-20264982)
chr4 (10-52)||(9167392-9167434)
chr4 (10-51)||(17266600-17266641)
chr4 (10-51)||(34098926-34098967)
chr4 (12-51)||(15017546-15017585)
chr4 (12-51)||(39488053-39488092)
chr4 (57-116)||(41021770-41021830)
[»] scaffold0585 (1 HSPs)
scaffold0585 (10-51)||(776-817)
[»] scaffold0096 (1 HSPs)
scaffold0096 (10-51)||(22519-22560)
[»] scaffold0076 (1 HSPs)
scaffold0076 (10-51)||(54978-55019)
[»] scaffold0017 (1 HSPs)
scaffold0017 (10-51)||(4497-4538)
[»] chr6 (3 HSPs)
chr6 (10-51)||(18553545-18553586)
chr6 (10-51)||(20417455-20417496)
chr6 (51-111)||(34940912-34940973)
[»] chr1 (4 HSPs)
chr1 (10-51)||(20190330-20190371)
chr1 (10-51)||(22062047-22062088)
chr1 (12-51)||(20127279-20127318)
chr1 (18-51)||(6473989-6474022)
[»] chr5 (1 HSPs)
chr5 (12-51)||(244345-244384)
[»] chr2 (2 HSPs)
chr2 (12-47)||(23732354-23732389)
chr2 (10-48)||(15410005-15410043)
[»] scaffold0083 (1 HSPs)
scaffold0083 (13-51)||(33427-33465)
[»] scaffold0010 (1 HSPs)
scaffold0010 (10-51)||(136963-137004)


Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-121; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 52 - 446
Target Start/End: Complemental strand, 3704264 - 3703867
Alignment:
Q  52 gttgtgatcttatgttttacaattttgctata-tctttcgatctgatgcaatatttcgattttgactacattcattagcatatttatggttatgatttgg 150  Q
    ||||||||||||||||||||||| |||||||  |||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||      
T  3704264 gttgtgatcttatgttttacaatcttgctatcctctttcaatctgatgcaatatttcgattttgactaccttgattagcatatttatggttatgatttaa 3704165  T
Q  151 ctattaagtttctaaagctttggtgtttgttaagtacttaacatcaaaggattttgttttg---tattatatgcaatgatgccta-ataaaggcatgtat 246  Q
    |||||| |||||| |||||| ||||||||| || ||||||||||| ||||||||||||| |   ||||||||| ||||||||||| |||||||||||||     
T  3704164 ctattatgtttctcaagcttcggtgtttgtgaattacttaacatctaaggattttgtttcgtcttattatatgtaatgatgcctatataaaggcatgtag 3704065  T
Q  247 cagacattagaaattgggtaaagggtgggtttattttagcttaaaaaagattttgggctnnnnnnntacagggataannnnnnnnagagattttgcaact 346  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||       |||| |||| |        |||||||||||||||    
T  3704064 cagacattagaaattgggt-aagggtgcgtttattttagcttaaaaaagattttgggctaaaaaaatacatggat-acttttttaagagattttgcaact 3703967  T
Q  347 agaacctatagaaattttgaagtggacttatatattgactatgagttttttaacaaataacttgtaaaagttaaactcaaacttgaacattctacttata 446  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  3703966 agaacttatagaaattttgaagtggacttatatattgactatgagttttttaacaaataacttgtaaaagttaaattcaaactaggacattctacttata 3703867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 52 - 283
Target Start/End: Complemental strand, 3696729 - 3696490
Alignment:
Q  52 gttgtgatcttatgttttacaattttgctata-tctttcgatctgatgcaatatttcgattttgactacattcattagcatatttatggttatgatttgg 150  Q
    |||||||||||||||||||| || |||||||  ||||||||||| || |||||| || ||| ||||||| || |||||| ||||||| ||||||||||||    
T  3696729 gttgtgatcttatgttttacgatcttgctatcctctttcgatctaattcaatatctctattctgactaccttgattagcctatttatagttatgatttgg 3696630  T
Q  151 ctattaagtttctaaagctttggtgtttgttaagtacttaacatcaaaggattttgttt---tgtattatatgcaatgatgccta-ataaaggc----at 242  Q
    |||||||||||||||||||||||||||||| || ||||||||||| || ||||||||||     ||||||||| ||||||||||| ||||||||    ||    
T  3696629 ctattaagtttctaaagctttggtgtttgtgaattacttaacatctaa-gattttgtttcaccttattatatgtaatgatgcctatataaaggcacatat 3696531  T
Q  243 gtatcagacattagaaattgggtaaagggtgggtttatttt 283  Q
      ||||||||||| |||||||||||| ||||||||| ||||    
T  3696530 caatcagacattaaaaattgggtaaatggtgggtttttttt 3696490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 3695413 - 3695351
Alignment:
Q  338 tttgcaactagaacctatagaaattttgaagtggacttatatattgactatgagttttttaac 400  Q
    |||||||||||||| |||||| |||||||| |||||||||||||| |||||||||||||||||    
T  3695413 tttgcaactagaacttatagatattttgaaatggacttatatattaactatgagttttttaac 3695351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 32706547 - 32706589
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatcag 52  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  32706547 attattcttaatttgcttccgacggctccgtggcactcatcag 32706589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 9595379 - 9595340
Alignment:
Q  12 tattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||| |||||||||||||||||||||||| |||||||||    
T  9595379 tattcataatttgcttccgacggctccgtggcactcatca 9595340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 9646342 - 9646303
Alignment:
Q  12 tattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||| |||||||||||||||||||||||| |||||||||    
T  9646342 tattcataatttgcttccgacggctccgtggcactcatca 9646303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 445
Target Start/End: Complemental strand, 3676009 - 3675975
Alignment:
Q  411 taaaagttaaactcaaacttgaacattctacttat 445  Q
    ||||||||||||||||||||| |||||||||||||    
T  3676009 taaaagttaaactcaaacttggacattctacttat 3675975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 396
Target Start/End: Complemental strand, 3650577 - 3650517
Alignment:
Q  337 ttttgcaac-tagaacctatagaaattttgaagtggacttatatattgactatgagttttt 396  Q
    ||||||||| ||| || |||| |||| ||||| |||||||||||||||||||| |||||||    
T  3650577 ttttgcaacctaggacttatataaatattgaaatggacttatatattgactattagttttt 3650517  T

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Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 5553679 - 5553720
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5553679 attattcttaatttgcttccgacggctccgtgacactcatca 5553720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 23433224 - 23433262
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactca 48  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  23433224 attattcagaatttgcttccgacggctccgtgacactca 23433262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 6826 - 6863
Alignment:
Q  14 ttcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6826 ttcttaatttgcttccgacggctccgtgacactcatca 6863  T

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Target: scaffold0146; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 9717 - 9756
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcat 49  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  9717 attattcttaatttgcttccgacgactccgtgacactcat 9756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 17384 - 17423
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcat 49  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  17384 attattcttaatttgcttccgacgactccgtgacactcat 17423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 20731081 - 20731122
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  20731081 attattcttaatttgcttccgacggctccgtggcactcatca 20731122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 20264982 - 20264941
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  20264982 attattcataatttgcttccgacggctccgtgacactcatca 20264941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 9167392 - 9167434
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatcag 52  Q
    |||||||||||||| |||||||||||| |||||||||||||||    
T  9167392 attattcttaatttacttccgacggcttcgtgacactcatcag 9167434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 17266641 - 17266600
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  17266641 attattcataatttgcttccgacggctccgtggcactcatca 17266600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 34098926 - 34098967
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  34098926 attattcataatttgcttccgacggctcagtgacactcatca 34098967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 15017585 - 15017546
Alignment:
Q  12 tattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||| |||||||||||||||||||||||| |||||||||    
T  15017585 tattcataatttgcttccgacggctccgtggcactcatca 15017546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 39488092 - 39488053
Alignment:
Q  12 tattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||| |||||||||||||||||||||||| |||||||||    
T  39488092 tattcataatttgcttccgacggctccgtggcactcatca 39488053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 41021830 - 41021770
Alignment:
Q  57 gatcttatgttttacaattttgctatatc-tttcgatctgatgcaatatttcgattttgac 116  Q
    ||||||||||||||  ||||||||||  | |||||||| |||||||||| |||||||||||    
T  41021830 gatcttatgttttatgattttgctatcccctttcgatccgatgcaatatctcgattttgac 41021770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 817 - 776
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  817 attattcttaattttcttccgacggctccgtggcactcatca 776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 22560 - 22519
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  22560 attattcttaatttgcttccgacggcttcgtggcactcatca 22519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 54978 - 55019
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  54978 attattcttaatttgcttccgacggctccgtggcattcatca 55019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 4538 - 4497
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  4538 attattcataatttgcttccgacggctccgtgatactcatca 4497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000007; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 18553545 - 18553586
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  18553545 attattcataatttgcttccgacggctccatgacactcatca 18553586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 20417496 - 20417455
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  20417496 attattcataatttgcttccgacggctccgtggcactcatca 20417455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 34940973 - 34940912
Alignment:
Q  51 agttgtgatcttatgttttacaattttgctatatc-tttcgatctgatgcaatatttcgatt 111  Q
    ||||| |||||||||||||||||| |||| ||  | |||||||||||||||| |||||||||    
T  34940973 agttgcgatcttatgttttacaatcttgccatcccctttcgatctgatgcaagatttcgatt 34940912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000007; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 20190371 - 20190330
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||||| ||| ||||||||||||||||||||||||||||||    
T  20190371 attattcataagttgcttccgacggctccgtgacactcatca 20190330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 22062088 - 22062047
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  22062088 attattcataatttgcttccgacggctcagtgacactcatca 22062047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 20127279 - 20127318
Alignment:
Q  12 tattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||| |||||||||||||||||||||||| |||||||||    
T  20127279 tattcataatttgcttccgacggctccgtggcactcatca 20127318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 6473989 - 6474022
Alignment:
Q  18 taatttgcttccgacggctccgtgacactcatca 51  Q
    |||||||||||||||||||||||| |||||||||    
T  6473989 taatttgcttccgacggctccgtggcactcatca 6474022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 244384 - 244345
Alignment:
Q  12 tattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    ||||| |||||||||||||||||||||||| |||||||||    
T  244384 tattcataatttgcttccgacggctccgtggcactcatca 244345  T

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Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 23732389 - 23732354
Alignment:
Q  12 tattcttaatttgcttccgacggctccgtgacactc 47  Q
    ||||| ||||||||||||||||||||||||||||||    
T  23732389 tattcataatttgcttccgacggctccgtgacactc 23732354  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 15410005 - 15410043
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactca 48  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  15410005 attattcttaatttgcttccgacggcttcgtggcactca 15410043  T

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Target: scaffold0083 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 33427 - 33465
Alignment:
Q  13 attcttaatttgcttccgacggctccgtgacactcatca 51  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  33427 attcataatttgtttccgacggctccgtgacactcatca 33465  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 136963 - 137004
Alignment:
Q  10 attattcttaatttgcttccgacggctccgtgacactcatca 51  Q
    |||||||||||||| |||||||||||| |||| |||||||||    
T  136963 attattcttaatttccttccgacggcttcgtggcactcatca 137004  T

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