View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13764_high_30 (Length: 330)
Name: NF13764_high_30
Description: NF13764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13764_high_30 |
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Alignment Details
Target: chr2 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 18 - 322
Target Start/End: Complemental strand, 45518959 - 45518656
Alignment:
| Q |
18 |
aattgcccttctaatttggttaattaacacaccttctttgttggatatacaagcccatcggtcatcattttaggcaagatataagtggttatcaaattaa |
117 |
Q |
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| T |
45518959 |
aattgcccttctaatttggttaattaacacaccttctttgttggatatacaagcccatcggtcatcattttaggcaagatataagtggttatcaaattaa |
45518860 |
T |
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| Q |
118 |
cttaatttgtataacaaaacatgtccccttgatctgttttttggttaacac-aggcatgtaattgagttcacaccaaaagtgacaaaaagtattgtatta |
216 |
Q |
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| T |
45518859 |
cttaatttgtataacaaaacatgtccctttgatctgttttttggttaacacaaggcatgtaattgagttcacaccaaaagtgacaaaaagtattgtat-- |
45518762 |
T |
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| Q |
217 |
tatattggtatgctagagatatcaaaggtaaacctttgatttgctatatgtgagttattcaagaaagatattatataaaacagcttatttcaaagtcttg |
316 |
Q |
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| T |
45518761 |
tatattggtatgctagagatatcaaaggtaaacctttgatttgctatatgtgagttattcaagaaagatattatataaaacagcttatttcaaagtcttg |
45518662 |
T |
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| Q |
317 |
atgatg |
322 |
Q |
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|||||| |
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| T |
45518661 |
atgatg |
45518656 |
T |
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