View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13764_high_35 (Length: 314)
Name: NF13764_high_35
Description: NF13764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13764_high_35 |
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Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 298
Target Start/End: Original strand, 37625187 - 37625467
Alignment:
| Q |
19 |
taatatacattgcatcttgcttctttctggtatttctctcattggcaagttctccaacagcgacaatataattaattgtcctcatgcaatgagagaggct |
118 |
Q |
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| T |
37625187 |
taatatacattgcatcttgcttctttctggtatttctctcattggcaagttctccaacagcgacaatataattaattgtcctcatgcaatgagagaggct |
37625286 |
T |
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| Q |
119 |
tcaccaccaaaaatatttataatttctatatttggtttagtcaaaaaatataataatttctatttggtaaaaaatatacttataataacaatgactcttc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37625287 |
tcaccaccaaaaatatttataatttctatatttggtttagtcaaaaaatataataatttctatttggtaaaaaatatacttataataacaatgactcttc |
37625386 |
T |
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| Q |
219 |
tttcnnnnnnnnta-aaataactatgactctgaccttagagtgtgtgtttcgttcaaagttatccacgaatattgttgagg |
298 |
Q |
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|||| | ||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| |
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| T |
37625387 |
tttcaaaaaataaataaataacaatgactctaaccttagagtgtgtgtttggttcaaagttatccacgaatatttttgagg |
37625467 |
T |
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