View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13764_high_51 (Length: 259)

Name: NF13764_high_51
Description: NF13764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13764_high_51
NF13764_high_51
[»] chr8 (57 HSPs)
chr8 (28-111)||(9608738-9608821)
chr8 (43-111)||(41972151-41972219)
chr8 (28-106)||(45121992-45122070)
chr8 (9-112)||(6876924-6877029)
chr8 (28-112)||(3038372-3038456)
chr8 (28-112)||(8918846-8918930)
chr8 (28-112)||(34834868-34834952)
chr8 (39-112)||(9309347-9309420)
chr8 (28-109)||(40518577-40518658)
chr8 (28-104)||(3669687-3669763)
chr8 (43-111)||(4154763-4154831)
chr8 (28-112)||(5420643-5420727)
chr8 (39-109)||(1514008-1514078)
chr8 (39-109)||(45122150-45122220)
chr8 (28-112)||(147443-147527)
chr8 (28-112)||(25561898-25561982)
chr8 (28-112)||(30359601-30359685)
chr8 (43-114)||(4154377-4154448)
chr8 (39-96)||(41416264-41416321)
chr8 (28-108)||(45123002-45123080)
chr8 (28-104)||(3670060-3670136)
chr8 (28-112)||(8794103-8794187)
chr8 (28-112)||(30359263-30359347)
chr8 (28-112)||(33113449-33113533)
chr8 (28-96)||(34835217-34835285)
chr8 (53-112)||(147821-147880)
chr8 (28-111)||(9620758-9620841)
chr8 (39-106)||(18372349-18372416)
chr8 (39-106)||(18372792-18372859)
chr8 (39-94)||(25561737-25561792)
chr8 (28-112)||(9482686-9482768)
chr8 (27-112)||(37544571-37544656)
chr8 (28-96)||(70356-70424)
chr8 (28-92)||(18373013-18373077)
chr8 (47-111)||(20995502-20995566)
chr8 (39-111)||(33831971-33832043)
chr8 (45-115)||(5274764-5274834)
chr8 (28-111)||(9308970-9309055)
chr8 (41-112)||(40518061-40518134)
chr8 (39-104)||(1013964-1014029)
chr8 (39-104)||(1014338-1014403)
chr8 (55-104)||(6731904-6731953)
chr8 (28-81)||(9609108-9609161)
chr8 (18-67)||(40579578-40579627)
chr8 (39-96)||(43398164-43398221)
chr8 (39-112)||(45121749-45121821)
chr8 (44-112)||(5915864-5915931)
chr8 (40-96)||(18380111-18380167)
chr8 (71-111)||(18645712-18645752)
chr8 (52-104)||(30441081-30441133)
chr8 (28-91)||(3037790-3037853)
chr8 (43-113)||(9620385-9620455)
chr8 (28-110)||(12283867-12283949)
chr8 (28-102)||(18372685-18372758)
chr8 (28-90)||(45122638-45122700)
chr8 (18-94)||(18372066-18372142)
chr8 (28-112)||(43274861-43274945)
[»] chr7 (44 HSPs)
chr7 (28-112)||(1085698-1085782)
chr7 (28-112)||(7517572-7517656)
chr7 (21-112)||(43241487-43241578)
chr7 (39-112)||(7554017-7554090)
chr7 (40-112)||(24177427-24177499)
chr7 (28-112)||(30244262-30244346)
chr7 (28-112)||(45434628-45434712)
chr7 (28-111)||(8128523-8128606)
chr7 (28-111)||(28301625-28301708)
chr7 (39-112)||(118394-118467)
chr7 (39-112)||(30245486-30245559)
chr7 (39-112)||(30255331-30255404)
chr7 (28-112)||(23459-23543)
chr7 (28-112)||(16569188-16569272)
chr7 (28-112)||(16596390-16596474)
chr7 (28-112)||(22566744-22566828)
chr7 (28-112)||(30245069-30245153)
chr7 (28-112)||(45754708-45754791)
chr7 (27-104)||(29157565-29157642)
chr7 (39-112)||(30244693-30244766)
chr7 (39-112)||(36109010-36109083)
chr7 (28-112)||(34218116-34218200)
chr7 (28-104)||(37533092-37533168)
chr7 (28-112)||(40094856-40094940)
chr7 (28-112)||(45433233-45433317)
chr7 (2-96)||(11845199-11845294)
chr7 (27-98)||(19122738-19122808)
chr7 (42-109)||(36622955-36623022)
chr7 (35-109)||(41854630-41854703)
chr7 (27-112)||(36939814-36939899)
chr7 (28-109)||(40230373-40230454)
chr7 (43-107)||(10341829-10341893)
chr7 (28-112)||(22567121-22567204)
chr7 (28-112)||(36534866-36534950)
chr7 (28-112)||(41910676-41910760)
chr7 (28-112)||(47129087-47129171)
chr7 (28-94)||(6054570-6054636)
chr7 (39-101)||(20599317-20599379)
chr7 (50-112)||(36967333-36967395)
chr7 (39-104)||(14681510-14681575)
chr7 (39-112)||(24838795-24838868)
chr7 (54-111)||(40094502-40094559)
chr7 (27-101)||(37533445-37533519)
chr7 (39-96)||(30032575-30032632)
[»] chr5 (52 HSPs)
chr5 (28-111)||(1028599-1028682)
chr5 (28-112)||(299481-299565)
chr5 (35-111)||(36568656-36568732)
chr5 (28-111)||(13415842-13415925)
chr5 (28-111)||(41632775-41632858)
chr5 (39-112)||(12662745-12662818)
chr5 (28-113)||(31509614-31509699)
chr5 (27-112)||(15370091-15370176)
chr5 (39-112)||(36492310-36492383)
chr5 (28-112)||(6224188-6224272)
chr5 (28-108)||(40296397-40296477)
chr5 (39-109)||(35150002-35150072)
chr5 (39-112)||(35914841-35914914)
chr5 (28-104)||(624196-624272)
chr5 (28-108)||(3295097-3295176)
chr5 (39-111)||(26074239-26074311)
chr5 (28-112)||(26074864-26074948)
chr5 (28-112)||(26075244-26075328)
chr5 (28-112)||(34753107-34753191)
chr5 (20-112)||(35167912-35168004)
chr5 (28-112)||(42405678-42405762)
chr5 (28-112)||(42508604-42508688)
chr5 (39-112)||(11417070-11417141)
chr5 (28-102)||(18603202-18603276)
chr5 (28-102)||(26074320-26074394)
chr5 (23-104)||(623818-623899)
chr5 (28-109)||(26074607-26074688)
chr5 (28-112)||(3295426-3295509)
chr5 (28-96)||(9498736-9498804)
chr5 (39-111)||(24489297-24489369)
chr5 (28-112)||(25327927-25328011)
chr5 (28-104)||(27502118-27502194)
chr5 (28-104)||(32487394-32487469)
chr5 (39-111)||(39309677-39309749)
chr5 (28-96)||(41170642-41170710)
chr5 (42-96)||(38427556-38427610)
chr5 (20-101)||(2411010-2411091)
chr5 (39-104)||(6500451-6500515)
chr5 (9-104)||(5723853-5723949)
chr5 (51-111)||(36522001-36522061)
chr5 (2-104)||(6500823-6500925)
chr5 (39-109)||(300954-301024)
chr5 (28-90)||(31509745-31509807)
chr5 (39-92)||(33747783-33747836)
chr5 (76-112)||(35150739-35150775)
chr5 (76-112)||(35151030-35151066)
chr5 (65-113)||(36527202-36527250)
chr5 (27-102)||(42524719-42524793)
chr5 (26-104)||(26590990-26591068)
chr5 (41-102)||(7768852-7768913)
chr5 (21-82)||(13786076-13786136)
chr5 (28-104)||(29549337-29549413)
[»] chr3 (60 HSPs)
chr3 (28-111)||(21832425-21832508)
chr3 (28-113)||(54017898-54017983)
chr3 (28-108)||(7767396-7767476)
chr3 (27-111)||(9240142-9240226)
chr3 (28-112)||(12114644-12114728)
chr3 (28-111)||(35946515-35946598)
chr3 (28-112)||(32462982-32463067)
chr3 (27-112)||(42342469-42342554)
chr3 (27-104)||(50612533-50612610)
chr3 (28-112)||(29644984-29645068)
chr3 (39-111)||(33175757-33175829)
chr3 (28-112)||(37990721-37990805)
chr3 (28-112)||(49336769-49336853)
chr3 (2-112)||(15772846-15772957)
chr3 (29-112)||(15773184-15773267)
chr3 (28-111)||(33803334-33803417)
chr3 (18-112)||(25739497-25739591)
chr3 (39-109)||(29644674-29644744)
chr3 (30-112)||(31190009-31190091)
chr3 (28-108)||(1634396-1634477)
chr3 (27-112)||(25755386-25755471)
chr3 (39-112)||(43346884-43346957)
chr3 (28-112)||(45901705-45901790)
chr3 (39-112)||(52634668-52634741)
chr3 (18-109)||(39336301-39336392)
chr3 (39-112)||(37991070-37991143)
chr3 (39-111)||(8327897-8327969)
chr3 (65-113)||(12747871-12747919)
chr3 (28-104)||(22304569-22304645)
chr3 (2-112)||(32462613-32462725)
chr3 (28-112)||(39914244-39914328)
chr3 (52-112)||(43346642-43346702)
chr3 (28-112)||(54018280-54018364)
chr3 (39-94)||(42584915-42584970)
chr3 (39-114)||(45395746-45395821)
chr3 (53-112)||(53577356-53577415)
chr3 (43-112)||(53118071-53118140)
chr3 (41-112)||(3135168-3135237)
chr3 (52-104)||(22304246-22304298)
chr3 (28-112)||(32589696-32589779)
chr3 (28-104)||(39389070-39389146)
chr3 (39-95)||(39935048-39935104)
chr3 (39-114)||(33809101-33809176)
chr3 (28-112)||(41359847-41359927)
chr3 (28-111)||(47964600-47964683)
chr3 (28-102)||(47508174-47508248)
chr3 (39-108)||(11661531-11661600)
chr3 (43-96)||(36986045-36986098)
chr3 (43-96)||(37011484-37011537)
chr3 (39-104)||(37726504-37726569)
chr3 (28-112)||(42342172-42342256)
chr3 (43-111)||(46546422-46546490)
chr3 (28-104)||(51886561-51886637)
chr3 (28-107)||(3384348-3384427)
chr3 (29-111)||(47964998-47965080)
chr3 (47-112)||(3135562-3135627)
chr3 (59-112)||(22304061-22304114)
chr3 (65-113)||(2299967-2300015)
chr3 (28-104)||(4823655-4823731)
chr3 (28-112)||(11661943-11662027)
[»] chr1 (58 HSPs)
chr1 (28-111)||(22077577-22077660)
chr1 (2-112)||(39066255-39066366)
chr1 (28-112)||(17294569-17294653)
chr1 (28-112)||(41184507-41184591)
chr1 (28-111)||(24600396-24600479)
chr1 (39-112)||(66565-66638)
chr1 (39-112)||(34364499-34364572)
chr1 (28-113)||(41157366-41157451)
chr1 (28-104)||(3537229-3537305)
chr1 (28-112)||(3875413-3875497)
chr1 (28-112)||(5320047-5320131)
chr1 (28-112)||(29798191-29798275)
chr1 (28-112)||(34364917-34365001)
chr1 (20-112)||(40082399-40082490)
chr1 (28-112)||(41142364-41142448)
chr1 (28-104)||(44290907-44290983)
chr1 (28-103)||(3550721-3550796)
chr1 (43-114)||(22793268-22793339)
chr1 (29-108)||(45084378-45084457)
chr1 (18-112)||(41156983-41157077)
chr1 (18-111)||(1188660-1188753)
chr1 (39-112)||(31767254-31767327)
chr1 (39-112)||(37850693-37850766)
chr1 (39-111)||(44685449-44685522)
chr1 (28-112)||(21378123-21378207)
chr1 (28-112)||(26661604-26661688)
chr1 (28-104)||(44290540-44290616)
chr1 (40-111)||(24132079-24132150)
chr1 (39-112)||(37556103-37556177)
chr1 (27-112)||(45839619-45839708)
chr1 (45-111)||(50469180-50469246)
chr1 (28-111)||(66169-66254)
chr1 (43-112)||(34649430-34649499)
chr1 (27-104)||(41759483-41759560)
chr1 (28-101)||(50052105-50052178)
chr1 (28-108)||(11977276-11977356)
chr1 (20-96)||(14318875-14318951)
chr1 (28-104)||(32594798-32594874)
chr1 (20-104)||(48588562-48588646)
chr1 (39-113)||(5575097-5575169)
chr1 (28-111)||(19283537-19283620)
chr1 (39-112)||(9955899-9955973)
chr1 (39-113)||(38804448-38804522)
chr1 (70-111)||(22077246-22077287)
chr1 (28-109)||(22077910-22077991)
chr1 (28-112)||(26661980-26662064)
chr1 (39-111)||(30630731-30630803)
chr1 (39-94)||(3537692-3537747)
chr1 (57-112)||(35154150-35154205)
chr1 (28-94)||(5528836-5528902)
chr1 (50-104)||(47379889-47379943)
chr1 (39-112)||(37555722-37555795)
chr1 (43-111)||(4878796-4878864)
chr1 (28-79)||(22077192-22077243)
chr1 (28-109)||(1187446-1187527)
chr1 (52-104)||(45494084-45494137)
chr1 (189-241)||(11786951-11787003)
chr1 (72-104)||(50051777-50051809)
[»] scaffold0078 (2 HSPs)
scaffold0078 (28-112)||(5349-5433)
scaffold0078 (28-112)||(4974-5058)
[»] chr6 (42 HSPs)
chr6 (28-112)||(2579954-2580038)
chr6 (28-111)||(10074445-10074528)
chr6 (28-111)||(10074073-10074156)
chr6 (28-105)||(593791-593868)
chr6 (36-113)||(6071123-6071200)
chr6 (28-104)||(2378126-2378202)
chr6 (28-112)||(2578525-2578608)
chr6 (28-112)||(16107670-16107754)
chr6 (28-104)||(26544049-26544125)
chr6 (28-104)||(29518503-29518579)
chr6 (28-104)||(29518920-29518996)
chr6 (28-104)||(32741179-32741255)
chr6 (28-113)||(8481918-8482002)
chr6 (39-111)||(10073709-10073779)
chr6 (28-112)||(2377746-2377830)
chr6 (28-104)||(3409259-3409335)
chr6 (28-96)||(9062431-9062499)
chr6 (28-111)||(10911558-10911642)
chr6 (28-104)||(14748420-14748496)
chr6 (28-96)||(32460662-32460730)
chr6 (28-104)||(35210204-35210280)
chr6 (45-114)||(33605644-33605713)
chr6 (28-96)||(1127368-1127436)
chr6 (28-112)||(5832108-5832192)
chr6 (28-112)||(16108055-16108139)
chr6 (39-101)||(1950278-1950340)
chr6 (42-104)||(3058226-3058288)
chr6 (31-108)||(33605971-33606048)
chr6 (44-112)||(2579203-2579271)
chr6 (43-111)||(12092579-12092647)
chr6 (28-112)||(16454567-16454651)
chr6 (28-112)||(16454899-16454983)
chr6 (28-96)||(17135151-17135219)
chr6 (2-104)||(1846748-1846851)
chr6 (27-89)||(2975567-2975629)
chr6 (39-101)||(6999889-6999951)
chr6 (28-104)||(3409660-3409736)
chr6 (28-96)||(3415466-3415534)
chr6 (28-112)||(5958685-5958769)
chr6 (77-112)||(7588355-7588390)
chr6 (39-96)||(2579585-2579642)
chr6 (39-111)||(2578928-2578999)
[»] chr4 (64 HSPs)
chr4 (39-111)||(2740693-2740765)
chr4 (28-111)||(3244531-3244614)
chr4 (36-111)||(52884688-52884763)
chr4 (39-112)||(52884879-52884952)
chr4 (30-111)||(54741260-54741341)
chr4 (29-112)||(3341120-3341203)
chr4 (28-111)||(36629230-36629313)
chr4 (39-112)||(16888907-16888981)
chr4 (28-110)||(44620654-44620736)
chr4 (39-112)||(10245912-10245985)
chr4 (18-111)||(28034222-28034315)
chr4 (27-112)||(50002418-50002503)
chr4 (28-112)||(4955397-4955481)
chr4 (28-112)||(34646729-34646813)
chr4 (29-111)||(2741064-2741146)
chr4 (31-113)||(3700356-3700438)
chr4 (28-112)||(16889616-16889701)
chr4 (39-112)||(25483328-25483401)
chr4 (27-112)||(36572011-36572096)
chr4 (28-109)||(39404013-39404094)
chr4 (39-112)||(44620288-44620361)
chr4 (39-112)||(49076539-49076612)
chr4 (28-112)||(22028041-22028125)
chr4 (28-112)||(22183344-22183428)
chr4 (28-112)||(39404390-39404474)
chr4 (39-111)||(39792951-39793023)
chr4 (41-113)||(41707557-41707629)
chr4 (39-112)||(4390192-4390265)
chr4 (39-112)||(36608752-36608825)
chr4 (28-112)||(1731727-1731811)
chr4 (28-104)||(49880160-49880236)
chr4 (28-96)||(50630835-50630903)
chr4 (28-111)||(54108908-54108989)
chr4 (28-104)||(55933204-55933280)
chr4 (28-111)||(32941203-32941286)
chr4 (39-110)||(44621420-44621491)
chr4 (28-107)||(54017675-54017754)
chr4 (39-94)||(54343092-54343147)
chr4 (28-109)||(3340802-3340883)
chr4 (39-96)||(20826225-20826282)
chr4 (28-112)||(43174498-43174583)
chr4 (39-112)||(45489422-45489495)
chr4 (28-101)||(50459724-50459797)
chr4 (30-112)||(54017784-54017868)
chr4 (44-112)||(12197370-12197438)
chr4 (52-112)||(19504697-19504757)
chr4 (39-111)||(20825829-20825901)
chr4 (28-104)||(41370357-41370433)
chr4 (28-112)||(51768140-51768224)
chr4 (10-109)||(34004646-34004744)
chr4 (27-96)||(6975535-6975604)
chr4 (51-104)||(50788086-50788139)
chr4 (28-96)||(760197-760265)
chr4 (39-95)||(44620362-44620418)
chr4 (39-95)||(44621011-44621067)
chr4 (28-111)||(10246340-10246423)
chr4 (28-112)||(22028449-22028535)
chr4 (39-112)||(44620936-44621010)
chr4 (39-89)||(45496820-45496870)
chr4 (43-112)||(11348423-11348492)
chr4 (63-112)||(11706636-11706685)
chr4 (56-113)||(45050592-45050649)
chr4 (53-106)||(49302902-49302955)
chr4 (46-110)||(49076928-49076992)
[»] chr2 (59 HSPs)
chr2 (39-111)||(28531407-28531479)
chr2 (28-111)||(962591-962674)
chr2 (28-112)||(6421377-6421461)
chr2 (28-112)||(28254319-28254403)
chr2 (28-111)||(42514642-42514725)
chr2 (29-107)||(7598606-7598684)
chr2 (35-93)||(40163462-40163520)
chr2 (39-112)||(38796311-38796384)
chr2 (28-112)||(15880255-15880339)
chr2 (28-112)||(16542441-16542525)
chr2 (28-88)||(28254194-28254254)
chr2 (28-112)||(36005962-36006045)
chr2 (28-104)||(36178687-36178763)
chr2 (28-104)||(37106188-37106264)
chr2 (28-112)||(38796702-38796786)
chr2 (39-111)||(40679722-40679794)
chr2 (28-107)||(1769889-1769968)
chr2 (47-112)||(36785664-36785729)
chr2 (28-109)||(40733512-40733593)
chr2 (28-104)||(14745749-14745825)
chr2 (28-112)||(31899508-31899592)
chr2 (28-104)||(41283557-41283633)
chr2 (9-111)||(12910221-12910324)
chr2 (28-111)||(33561533-33561616)
chr2 (28-111)||(37632679-37632762)
chr2 (18-112)||(6712968-6713062)
chr2 (27-109)||(37894773-37894855)
chr2 (39-104)||(5543091-5543156)
chr2 (28-112)||(15511577-15511659)
chr2 (55-112)||(31468855-31468912)
chr2 (28-104)||(5542707-5542783)
chr2 (39-111)||(9231242-9231314)
chr2 (27-111)||(33954342-33954426)
chr2 (28-104)||(36178351-36178427)
chr2 (40-104)||(37105924-37105988)
chr2 (28-111)||(33953853-33953936)
chr2 (41-112)||(37895156-37895227)
chr2 (46-112)||(29676895-29676961)
chr2 (43-109)||(35580820-35580886)
chr2 (28-113)||(29873619-29873704)
chr2 (76-112)||(3672711-3672747)
chr2 (28-112)||(12529110-12529194)
chr2 (29-109)||(40733878-40733958)
chr2 (42-111)||(42515005-42515078)
chr2 (36-111)||(5367448-5367523)
chr2 (28-107)||(7598225-7598304)
chr2 (45-108)||(29874122-29874185)
chr2 (50-113)||(30313169-30313232)
chr2 (43-113)||(30323455-30323525)
chr2 (28-112)||(31259698-31259785)
chr2 (72-112)||(3673077-3673117)
chr2 (56-112)||(6421296-6421352)
chr2 (28-88)||(6422126-6422186)
chr2 (53-111)||(16590881-16590940)
chr2 (70-113)||(43443106-43443149)
chr2 (40-86)||(36178265-36178311)
chr2 (28-111)||(41678449-41678534)
chr2 (45-111)||(23346228-23346296)
chr2 (39-96)||(33731656-33731713)
[»] scaffold0734 (2 HSPs)
scaffold0734 (28-112)||(5769-5853)
scaffold0734 (39-112)||(5388-5461)
[»] scaffold0702 (2 HSPs)
scaffold0702 (39-104)||(235-300)
scaffold0702 (28-112)||(596-680)
[»] scaffold0391 (2 HSPs)
scaffold0391 (28-112)||(1188-1272)
scaffold0391 (53-112)||(3092-3151)
[»] scaffold0171 (1 HSPs)
scaffold0171 (28-112)||(17538-17622)
[»] scaffold0113 (1 HSPs)
scaffold0113 (36-115)||(39827-39906)
[»] scaffold0504 (1 HSPs)
scaffold0504 (28-112)||(10193-10277)
[»] scaffold0027 (1 HSPs)
scaffold0027 (39-108)||(47356-47425)


Alignment Details
Target: chr8 (Bit Score: 64; Significance: 5e-28; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 9608821 - 9608738
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  9608821 tttatgggtcatcttacttataaggtgttcaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 9608738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 41972219 - 41972151
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  41972219 acttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcacacaaca 41972151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 45121992 - 45122070
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcaca 106  Q
    |||||||||| |||||||||||||||||||||||||||||  | ||| ||||||||||||||||||||| |||||||||    
T  45121992 tttatgagtcctcttacttataaagtgttcaacctttactattttatgcgatgtgggacatataactcacacttgcaca 45122070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 6876924 - 6877029
Alignment:
Q  9 caaaaccctaag-caataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggac-atataactcatacttgcaca 106  Q
    |||||||||||| |||| | | |||| ||||||||| |||||| ||||||||||||||||| | ||||||||||||||| |||||||||| |||||||||    
T  6876924 caaaaccctaagacaatgagtgtatgggtcatcttatttataaggtgttcaacctttacttttttatccgatgtgggactatataactcacacttgcaca 6877023  T
Q  107 caacaa 112  Q
    ||||||    
T  6877024 caacaa 6877029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 3038372 - 3038456
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| | |||||||||||||||||||||||||||  | ||||||||||||||||||||||||| ||||| |||||||||    
T  3038372 tttatgggtccttttacttataaagtgttcaacctttactattttatccgatgtgggacatataactcacacttgtacacaacaa 3038456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 8918846 - 8918930
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||||||||||||||||||||   ||||| |||||||||||| ||||||| |||||||||||||||    
T  8918846 tttatgggtcctcttacttataaagtgttcaacctttactctgctatctgatgtgggacatgtaactcacacttgcacacaacaa 8918930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 34834952 - 34834868
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||||||||||||||||| ||||| ||||||||||  | ||||| ||||||||||||||||||| ||||| |||||||||    
T  34834952 tttatgagtcatcttacttataaggtgtttaacctttactattttatccaatgtgggacatataactcacacttgtacacaacaa 34834868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 9309420 - 9309347
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||| ||||||  | ||||||||||||||||||||||||| |||||||||||||||    
T  9309420 tcttacttataaggtgttcaacatttactcttttatccgatgtgggacatataactcacacttgcacacaacaa 9309347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 40518658 - 40518577
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||| ||| ||||| |||||| ||||||||||||||||| |||||| |||||||||||||||||||| ||||| ||||||    
T  40518658 tttatgggtcctcttatttataaggtgttcaacctttacttttctatctgatgtgggacatataactcacacttgaacacaa 40518577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 3669763 - 3669687
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||||||| |||||||||||| ||||||||||||||||  | |||| |||||||||||||||||||| |||||||    
T  3669763 tttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgca 3669687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 4154763 - 4154831
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||||||||||| ||||||||||||||    
T  4154763 acttataaagtgttcaacctccacttttctatcagatgtgggacatataactcacacttgcacacaaca 4154831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 5420727 - 5420643
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| ||||||||||||  |||||||||||||||  |||||||||||||||||||||||  || ||||||| |||||||    
T  5420727 tttatgagtcctcttacttataagatgttcaacctttactattctatccgatgtgggacatataatacacacttgcatacaacaa 5420643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 1514008 - 1514078
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||||||||| ||||||||||||||||  | |||||||||||||| |||||||||||||||| ||||||    
T  1514008 tcttacttataaggtgttcaacctttactcttttatccgatgtgggatatataactcatacttgtacacaa 1514078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 45122150 - 45122220
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||||||||| ||||||||||||||||  | ||||||||||| ||||||||||||| ||||||||||||    
T  45122150 tcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaa 45122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 147527 - 147443
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| ||||| |||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||| ||| ||||||    
T  147527 tttatgggtcctcttatttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttacacgcaacaa 147443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 25561898 - 25561982
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||| ||||||  | ||||||||||||||||||||||||| ||||| | |||||||    
T  25561898 tttatgggtcctcttacttataaggtgttcaacgtttactcttttatccgatgtgggacatataactcacacttgtagacaacaa 25561982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 30359685 - 30359601
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| |||||||||||| ||||||||| ||||||  | |||| |||||| ||||||||||||| ||||| |||||||||    
T  30359685 tttatgagtcctcttacttataaggtgttcaacttttactcttttatctgatgtgagacatataactcacacttgtacacaacaa 30359601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 4154377 - 4154448
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaatt 114  Q
    ||||||||||||||||||||  |||| |||||| ||||| |||||||||||||| | |||||||||||||||    
T  4154377 acttataaagtgttcaacctccacttttctatctgatgtaggacatataactcacatttgcacacaacaatt 4154448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 41416264 - 41416321
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||    
T  41416264 tcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactca 41416321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 45123080 - 45123002
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacaca 108  Q
    |||||| |||||||||||||  | ||||| ||||||||||  | ||||||||||||||||||||||||| |||||||||||    
T  45123080 tttatgggtcatcttactta--aggtgtttaacctttactattttatccgatgtgggacatataactcacacttgcacaca 45123002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 3670136 - 3670060
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| || ||||||||| ||||| ||||||||||  | ||||||||||||||||||||||||| |||||||    
T  3670136 tttatgggtcctcatacttataaggtgttaaacctttactattttatccgatgtgggacatataactcacacttgca 3670060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 8794187 - 8794103
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| ||||||||||||  |||||||| |||| |  | ||||||||||| ||||||||||||| ||||| |||||||||    
T  8794187 tttatgagtcctcttacttataagatgttcaacatttattcttttatccgatgtgagacatataactcacacttgtacacaacaa 8794103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 30359347 - 30359263
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||| ||||||| ||||||||| ||||||  | ||||||||||| ||||||||||||| ||||| |||||||||    
T  30359347 tttatgggtcctcttgcttataaggtgttcaacatttactcttttatccgatgtgagacatataactcacacttgtacacaacaa 30359263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 33113449 - 33113533
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| ||||||||||||   ||||||||||||||  | |||||||||| |||||||||||||| ||||| |||||||||    
T  33113449 tttatgggtcctcttacttataagacgttcaacctttactattttatccgatgtaggacatataactcaaacttgtacacaacaa 33113533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 34835285 - 34835217
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | |||| ||||||||||||||||||||    
T  34835285 tttatgggtcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataactca 34835217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 147880 - 147821
Alignment:
Q  53 tgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||| ||||||| | |||| |||||||||||||||||||| |||||||||||||||    
T  147880 tgttcaacatttacttttttatcagatgtgggacatataactcacacttgcacacaacaa 147821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 9620758 - 9620841
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| ||| |||||||||||| ||||| | ||||| |||||| | |||| ||||||||||||| ||||||||||||||    
T  9620758 tttatgggtcctctcacttataaagtgatcaacttctacttttctatctgttgtgagacatataactcacacttgcacacaaca 9620841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 18372349 - 18372416
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcaca 106  Q
    |||||||||||| ||||||||||||||||  | ||||||||||| ||||||||||||| |||| ||||    
T  18372349 tcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactttcaca 18372416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 18372792 - 18372859
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcaca 106  Q
    |||||||||||| ||||||||||||||||  | ||||||||||| ||||||||||||| |||| ||||    
T  18372792 tcttacttataaggtgttcaacctttactattttatccgatgtgtgacatataactcacactttcaca 18372859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 25561737 - 25561792
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataact 94  Q
    |||||||||||| ||||||||||||||||  | |||||||||||||||||||||||    
T  25561737 tcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataact 25561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 9482686 - 9482768
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||| |||||| |||||||||||  ||||| |||||||||    
T  9482686 tttatgggtcctcttacttataaggtgttcaacctttactcttttatcccatgtggaacatataactc--acttgtacacaacaa 9482768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 37544571 - 37544656
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||| ||| |||| ||||||| ||||||||||||||||  | ||||||||||| ||| ||||||||| |||||  ||||||||    
T  37544571 atttatgggtcctctttcttataatgtgttcaacctttactattttatccgatgtgcgacttataactcacacttgtgcacaacaa 37544656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 70356 - 70424
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||| ||| ||||||||||||  |||||||| ||||||  | |||||||||||||||||||||||||    
T  70356 tttatgggtcctcttacttataagatgttcaacatttactcttttatccgatgtgggacatataactca 70424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 18373013 - 18373077
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataa 92  Q
    |||||||||| ||||| |||||| ||||||||||||||||  | ||||||| |||||||||||||    
T  18373013 tttatgagtcctcttatttataaggtgttcaacctttactattttatccgaagtgggacatataa 18373077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 20995502 - 20995566
Alignment:
Q  47 ataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||||||||||||  |||| | |||| |||||| ||||||||||||| ||||||||||||||    
T  20995502 ataaagtgttcaacctccacttttttatctgatgtgagacatataactcacacttgcacacaaca 20995566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 33832043 - 33831971
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||||||||||||||||| | ||||| ||| | | | ||| ||||||||||||| ||||||||||||||    
T  33832043 tcttacttataaagtgttcaacttctacttttctcttcaacgtgagacatataactcacacttgcacacaaca 33831971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 5274834 - 5274764
Alignment:
Q  45 ttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaattc 115  Q
    |||||||||||||||||| | ||| | ||| | |||| | ||||||||||||||||||||||||| |||||    
T  5274834 ttataaagtgttcaacctctccttttttattcaatgtagaacatataactcatacttgcacacaataattc 5274764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 9309055 - 9308970
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtg--ggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| ||||||||||||  |||||||| ||||||  | |||| ||||||  |||||||||||||| ||||||||||||||    
T  9309055 tttatgggtcctcttacttataacatgttcaacttttactcttttatctgatgtgtaggacatataactcacacttgcacacaaca 9308970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 40518134 - 40518061
Alignment:
Q  41 ttacttataaagtgttcaacctttacttctct--atccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| ||||||||||||||||| | |  |||| |||||| |||||||||||| ||||| |||||||||    
T  40518134 ttacttataaggtgttcaacctttacttttttttatccaatgtggaacatataactcacacttgaacacaacaa 40518061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 1013964 - 1014029
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||||||||  ||||||||| ||||||  | |||||||||||| |||||||||||| |||||||    
T  1013964 tcttacttatagggtgttcaacttttactattttatccgatgtggaacatataactcacacttgca 1014029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 1014338 - 1014403
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||||||||| ||||||||||||||||  | |||| |||||  ||||||||||||| |||||||    
T  1014338 tcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactcacacttgca 1014403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 6731953 - 6731904
Alignment:
Q  55 ttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  6731953 ttcaacctttactattttatccgatgtgggacatataactcacacttgca 6731904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 9609161 - 9609108
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgt 81  Q
    |||||| ||||||||||||||||  |||||||||||||||| |||||| |||||    
T  9609161 tttatgggtcatcttacttataagatgttcaacctttacttttctatctgatgt 9609108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 40579578 - 40579627
Alignment:
Q  18 aagcaataaatttatgagtcatcttacttataaagtgttcaacctttact 67  Q
    ||||||||| |||||| ||| |||||||||||| ||||||||||||||||    
T  40579578 aagcaataagtttatgggtcctcttacttataaggtgttcaacctttact 40579627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 43398164 - 43398221
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    ||||| |||||| ||||||||||||||||| |||||||||| || || ||||||||||    
T  43398164 tcttatttataaggtgttcaacctttacttttctatccgatatgagatatataactca 43398221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 45121749 - 45121821
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||| ||||||||||||  | |||||||||||||||| | |||||| ||||| |||||||||    
T  45121749 tcttacttataaggtgatcaacctttactcttttatccgatgtgggaca-acaactcacacttgtacacaacaa 45121821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 5915931 - 5915864
Alignment:
Q  44 cttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||||||| ||| ||||| | | ||||| |||| |||||||||||||| |||||||||||||||    
T  5915931 cttataaagtgttaaac-tttacatttttatccaatgtaggacatataactcacacttgcacacaacaa 5915864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 18380111 - 18380167
Alignment:
Q  40 cttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    ||||||||||| ||||||||||||||||  | ||| |||||||||| ||||||||||    
T  18380111 cttacttataaggtgttcaacctttactattttattcgatgtgggatatataactca 18380167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 111
Target Start/End: Original strand, 18645712 - 18645752
Alignment:
Q  71 ctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  18645712 ctatccgatgtgagacatataactcacacttgcacacaaca 18645752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 30441133 - 30441081
Alignment:
Q  52 gtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    ||||||||||||||||  | || |||||||||||||||||||||| |||||||    
T  30441133 gtgttcaacctttactattttagccgatgtgggacatataactcacacttgca 30441081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 3037790 - 3037853
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatata 91  Q
    |||||||||| |||||||||||| ||||||||| ||||||  |  ||||||||||| |||||||    
T  3037790 tttatgagtcctcttacttataaggtgttcaacatttactatttcatccgatgtggaacatata 3037853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 9620385 - 9620455
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    ||||||||||||||||| ||  |||| ||||| | | |||||| |||||||| | ||||||||||||||||    
T  9620385 acttataaagtgttcaaactccacttttctattcaacgtgggatatataactgacacttgcacacaacaat 9620455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 12283949 - 12283867
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaac 110  Q
    |||||| ||||| |||||| |||  | |||||| ||||||| | |||| || ||||||||||||||| | |||||||||||||    
T  12283949 tttatgtgtcattttacttttaagatattcaacatttacttttttatctgacgtgggacatataacttacacttgcacacaac 12283867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 18372685 - 18372758
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttg 102  Q
    |||||||||| |||||||||||| ||||||||||||||||  | |||||||  ||| |||||||| ||| |||||    
T  18372685 tttatgagtcctcttacttataa-gtgttcaacctttactattttatccgaaatggaacatataaatcacacttg 18372758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 45122700 - 45122638
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatat 90  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||| ||| |||||    
T  45122700 tttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgcgggccatat 45122638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 18372066 - 18372142
Alignment:
Q  18 aagcaataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataact 94  Q
    ||||||| | ||||||  || |||||||||||| ||||||||||||||||  | |||  ||||||| ||||||||||    
T  18372066 aagcaatgagtttatggatcctcttacttataaggtgttcaacctttactattttattggatgtggtacatataact 18372142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 43274861 - 43274945
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| ||||||||||||  | |||||||||||||  | |||| ||||||  |||||||||||| ||||  |||||||||    
T  43274861 tttatgggtcctcttacttataatatattcaacctttactcttttatctgatgtgaaacatataactcacacttatacacaacaa 43274945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 1085698 - 1085782
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||| |||||||||||||||    
T  1085698 tttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaa 1085782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 7517656 - 7517572
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||||||||||    
T  7517656 tttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcacacaacaa 7517572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 43241578 - 43241487
Alignment:
Q  21 caataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| |||||||||| | |||||||||| |||||||||||||| || | |||||||||||| |||||||||||| |||||||||||||||    
T  43241578 caataagtttatgagtccttttacttataaggtgttcaacctttatttttttatccgatgtggaacatataactcacacttgcacacaacaa 43241487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 7554090 - 7554017
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||||||||||    
T  7554090 tcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaa 7554017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 24177499 - 24177427
Alignment:
Q  40 cttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||||| ||||||| ||||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  24177499 cttacttataaggtgttcagcctttactcttttatccgatgtgggacatataactcatacttgcacacaacaa 24177427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 30244346 - 30244262
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| |||||||||||| || |||||||||||||  | ||||||||||||||||||||||||| ||||| |||||||||    
T  30244346 tttatgagtcctcttacttataaggtcttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaa 30244262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 45434712 - 45434628
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||| | ||||||||||||||||||||||| | ||||| |||||||||    
T  45434712 tttatgggtcctcttacttataaggtgttcaacctttacttttttatccgatgtgggacatataacttacacttgtacacaacaa 45434628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 8128523 - 8128606
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| |||||| ||||| |||||||||||||| || |||||||||| |||||||||||||||| ||||||||||||||    
T  8128523 tttatgggtcctcttacatataaggtgttcaacctttatttttctatccgatatgggacatataactcacacttgcacacaaca 8128606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 28301625 - 28301708
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| |||||||||||| ||||||| | ||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  28301625 tttatgggtcctcttacttataaggtgttcagcttttacttttctatccgatgtgagacatataactcacacttgcacacaaca 28301708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 118394 - 118467
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| | ||||||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||    
T  118394 tcttacttattaggtgttcaacctttacttttctatctgatgtgggacatataacttacacttgcacacaacaa 118467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 30245559 - 30245486
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | |||| |||||||||||||||||||| |||||||||||||||    
T  30245559 tcttacttataaggtgttcaacctttactcttttatctgatgtgggacatataactcacacttgcacacaacaa 30245486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 30255404 - 30255331
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | |||||||||||||||||||||| || |||||||||||||||    
T  30255404 tcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataacgcacacttgcacacaacaa 30255331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 23459 - 23543
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | |||||||||||| |||||||||||| | |||||||||||||    
T  23459 tttatgggtcctcttacttataaggtgttcaacctttactattgtatccgatgtggaacatataactcacaattgcacacaacaa 23543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 16569272 - 16569188
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| || |||||||||||||  ||||||||||||| ||||||||||||| ||||||| |||||||    
T  16569272 tttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaacaa 16569188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 16596390 - 16596474
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| || |||||||||||||  ||||||||||||| ||||||||||||| ||||||| |||||||    
T  16596390 tttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaacaa 16596474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 22566744 - 22566828
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||| ||||| ||||||| |||||||    
T  22566744 tttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatattactcacacttgcatacaacaa 22566828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 30245153 - 30245069
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | |||||||||||| |||||||||||| ||||| |||||||||    
T  30245153 tttatgggtcgtcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactcacacttgtacacaacaa 30245069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 45754791 - 45754708
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||||||||||||||||| ||||||||| ||||||  | |||||||||| |||||||||||||| ||||| |||||||||    
T  45754791 tttatgagtcatcttacttataaggtgttcaacatttactattttatccgatgt-ggacatataactcacacttgtacacaacaa 45754708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 29157642 - 29157565
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    ||||||| ||| |||||||||||| ||||||||||||||||  | |||||| |||||||||||||||||| |||||||    
T  29157642 atttatgggtcgtcttacttataaggtgttcaacctttactattttatccggtgtgggacatataactcacacttgca 29157565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 30244766 - 30244693
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||| |||||| ||||||||||||||||  | ||||| ||||||||||||||||||| |||||||||||||||    
T  30244766 tcttatttataaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgcacacaacaa 30244693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 36109010 - 36109083
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | ||||||||||| || |||||||||| |||||||||||||||    
T  36109010 tcttacttataaggtgttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaacaa 36109083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 34218116 - 34218200
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| ||| |||||||| ||||||||| ||||||| | ||||||||||| ||||||||||||| | ||| |||||||||    
T  34218116 tttatgagtcctctcacttataaggtgttcaacatttacttttttatccgatgtgagacatataactcacatttgtacacaacaa 34218200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 37533092 - 37533168
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||| ||||||||||||||||||| |||||||    
T  37533092 tttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactcacacttgca 37533168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 40094856 - 40094940
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||| ||||||||||  | ||| ||||||| ||||||||||||| |||||||||||||||    
T  40094856 tttatgggtcctcttacttataaggtgttgaacctttactcttttattcgatgtgagacatataactcacacttgcacacaacaa 40094940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 45433317 - 45433233
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||  |||||||||||| ||||||||||||||||  | ||||||||||||  ||||||||||| ||||| |||||||||    
T  45433317 tttatgagttctcttacttataaggtgttcaacctttactcttttatccgatgtggatcatataactcacacttgtacacaacaa 45433233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 11845294 - 11845199
Alignment:
Q  2 tcttatgcaaaaccctaag-caataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||| ||||||| |||| ||||  ||||||| ||| |||||||||||| ||||||||||||||||  | |||||||||||| ||||||||||||    
T  11845294 tcttatccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataactca 11845199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 19122808 - 19122738
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcata 98  Q
    ||||||||||| |||||||||||| ||||||||||||||||  | |||||||||| ||||||||||||||||    
T  19122808 atttatgagtcctcttacttataaggtgttcaacctttactattttatccgatgt-ggacatataactcata 19122738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 36623022 - 36622955
Alignment:
Q  42 tacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||||||| |||| ||||||||||  | ||||||||||||||||||||||||| ||||||||||||    
T  36623022 tacttataaaatgtttaacctttactattttatccgatgtgggacatataactcacacttgcacacaa 36622955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 41854703 - 41854630
Alignment:
Q  35 gtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||||| ||||||| ||||||||||||||||  | || | |||||||||||||||||||||||||||||||||    
T  41854703 gtcatcttgcttataaggtgttcaacctttactctttta-ctgatgtgggacatataactcatacttgcacacaa 41854630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 36939814 - 36939899
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||| ||| |||||||||||| ||||||||| ||||||  | ||| |||| |||||||||||||||| ||||||||| |||||    
T  36939814 atttatgggtcctcttacttataaggtgttcaacttttactattttatacgatttgggacatataactcacacttgcacagaacaa 36939899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 40230373 - 40230454
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||| ||| ||||||||||||  |||||||| ||||||| | ||| ||||||||||||||||||| | ||||||||||||    
T  40230373 tttatgggtcctcttacttataagatgttcaacttttacttttttattcgatgtgggacatataacttacacttgcacacaa 40230454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 10341893 - 10341829
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacac 107  Q
    ||||||||||||||||||||  |||| ||||||||||||| ||||||||||| ||| ||||||||    
T  10341893 acttataaagtgttcaacctccacttttctatccgatgtgagacatataacttatatttgcacac 10341829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 22567121 - 22567204
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | |||||||||| |||||||| ||||| ||||||| |||||||    
T  22567121 tttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgt-ggacatattactcacacttgcatacaacaa 22567204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 36534866 - 36534950
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||| ||||  | ||||||| ||||||||||||| | | |||||||||||||||    
T  36534866 tttatgggtcctcttacttataaggtgttcaacctctactgttttatccgaggtgggacatataagttacacttgcacacaacaa 36534950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 41910676 - 41910760
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| ||| | |||||| || |||||||||||||  | ||||||||||||||||||||||||| |||| ||||||||||    
T  41910676 tttatgggtcctctcagttataaggtattcaacctttactcttttatccgatgtgggacatataactcacacttacacacaacaa 41910760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 47129171 - 47129087
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| ||||||||||||   ||||||||||||||  | ||||||||||| ||||||||||||| |||||  ||||||||    
T  47129171 tttatgggtcctcttacttataagaggttcaacctttactattttatccgatgtgagacatataactcacacttgtgcacaacaa 47129087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 6054636 - 6054570
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataact 94  Q
    |||||| ||| |||||||||||| ||||||||| ||||||  | ||||||||||| |||||||||||    
T  6054636 tttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtgagacatataact 6054570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 20599379 - 20599317
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatactt 101  Q
    ||||| |||||||||||| | ||||||||| | |||||||| |||||||||||||||| ||||    
T  20599379 tcttatttataaagtgtttatcctttacttttttatccgatatgggacatataactcacactt 20599317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 36967333 - 36967395
Alignment:
Q  50 aagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||| || |||||||| | ||||||||||| ||||||||||||| ||||| |||||||||    
T  36967333 aagtgtttaatctttacttttttatccgatgtgagacatataactcacacttgtacacaacaa 36967395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 14681575 - 14681510
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    ||||||||| || ||||||||||||||||  | |||| |||||||||||||||||| | |||||||    
T  14681575 tcttacttacaaggtgttcaacctttactattttatctgatgtgggacatataacttacacttgca 14681510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 24838795 - 24838868
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | ||| ||||||| ||||||||||| | ||||  |||||||||    
T  24838795 tcttacttataaggtgttcaacctttactcttttattcgatgtgagacatataacttacacttatacacaacaa 24838868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 40094502 - 40094559
Alignment:
Q  54 gttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||||||||||  | |||| ||||| |||||||||||||| ||||||||||||||    
T  40094502 gttcaacctttactcttttatctgatgttggacatataactcacacttgcacacaaca 40094559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 37533445 - 37533519
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatactt 101  Q
    ||||||| ||| |||||||||||| ||||||||||||||||  | ||| | |||| | |||||||||||| ||||    
T  37533445 atttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtagaacatataactcacactt 37533519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 30032632 - 30032575
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||||||||| |||||||||  |||||  | ||| |||||||||||||||||||||    
T  30032632 tcttacttataaggtgttcaacacttactcttttattcgatgtgggacatataactca 30032575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 1028599 - 1028682
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  1028599 tttatgggtcctcttacttataaagtgttcatcctttacttttctatccgatgtgggacatataactcacacttgtacacaaca 1028682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 299565 - 299481
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| |||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||| ||||||||    
T  299565 tttatgggtcatcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgcgcacaacaa 299481  T

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Target: chr5; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 36568656 - 36568732
Alignment:
Q  35 gtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||| |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  36568656 gtcatctcacttataaggtgttcaacttttacttttctatccgatgtgggacatataactcacacttgcacacaaca 36568732  T

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Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 13415842 - 13415925
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||    
T  13415842 tttatgggtcctcttacttataaggtgttcaacctttactaatttatccgatgtgggacatataactcacacttgcacacaaca 13415925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 41632858 - 41632775
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| | ||||||||||||||    
T  41632858 tttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataacttacacttgcacacaaca 41632775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 12662745 - 12662818
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||||||| |||||||||||||||  | ||||||||||||||||||||||||| |||||||||||||||    
T  12662745 tcttacttataaaatgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaa 12662818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 31509699 - 31509614
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    |||||||||| ||| |||||||||||| |||||||  |||| ||||||||||||| ||||||||||||| ||||||||||||||||    
T  31509699 tttatgagtcctctcacttataaagtgctcaacctccacttttctatccgatgtgagacatataactcacacttgcacacaacaat 31509614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 15370176 - 15370091
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||| ||| ||||||||||||  |||||||||||||||  | ||| ||||||||||||||||||||| |||||||||||||||    
T  15370176 atttatgggtcctcttacttataagatgttcaacctttactattttattcgatgtgggacatataactcacacttgcacacaacaa 15370091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 36492310 - 36492383
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| ||||||| |||||||    
T  36492310 tcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcaaacaacaa 36492383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 6224272 - 6224188
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||| ||||||||||||||||| ||||| |||||||||    
T  6224272 tttatgggtcctcttacttataaggtgttcaacctttactcttttatccgaagtgggacatataactcacacttgtacacaacaa 6224188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 40296397 - 40296477
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacaca 108  Q
    |||||| ||| |||||||||||| ||||||||||||| ||  | ||||||||||||||||||||||||| |||||||||||    
T  40296397 tttatgggtcctcttacttataaggtgttcaaccttttctattttatccgatgtgggacatataactcacacttgcacaca 40296477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 35150072 - 35150002
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||||||||| |||||||||||| |||  | ||||||||||||||||||||||||| ||||||||||||    
T  35150072 tcttacttataaggtgttcaaccttgactcttttatccgatgtgggacatataactcacacttgcacacaa 35150002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 35914914 - 35914841
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||||||| |||||||||||||||  | ||||||||||| ||||||||||||||||||  |||||||||    
T  35914914 tcttacttataaaatgttcaacctttactcttttatccgatgtgtgacatataactcatacttatacacaacaa 35914841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 624272 - 624196
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| |||||||||||||||| ||||||||||||||||  | ||| | ||||||||||||||||||| |||||||    
T  624272 tttatgggtcatcttacttataacgtgttcaacctttactattttatacaatgtgggacatataactcacacttgca 624196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 3295097 - 3295176
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacaca 108  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||| ||||| |||||||||||    
T  3295097 tttatgggtcttcttacttataaggtgttcaacctttactattttatccgatgtgggacatat-actcacacttgcacaca 3295176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 26074239 - 26074311
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| | ||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||    
T  26074239 tcttacatatgaggtgttcaacctttacttttttatccgatgtgtgacatataactcacacttgcacacaaca 26074311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 26074864 - 26074948
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| || ||||||||  ||||||||||||||||  | ||||||||||||||||||||||||| ||||| |||||||||    
T  26074864 tttatgggtcctcctacttatattgtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaa 26074948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 26075244 - 26075328
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||| ||||||||| ||| ||||| |||||||||    
T  26075244 tttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgagacatataaatcacacttgtacacaacaa 26075328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 34753107 - 34753191
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||| ||||||| ||||||| ||||||||||||||||| | | ||| |||||||||    
T  34753107 tttatgggtcttcttacttataaggtgttcaacttttacttttctatccaatgtgggacatataacttacatttgtacacaacaa 34753191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 35167912 - 35168004
Alignment:
Q  20 gcaataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||||||| |||||| ||||||||| ||||||||||||||||  | |||| |||||| || | |||||||||||||| |||||||||    
T  35167912 gcaatagatttatgggtcatcctacttataaggtgttcaacctttactcttttatctgatgtgagatacataactcatacttgtacacaacaa 35168004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 42405678 - 42405762
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| | |||||| ||| ||||||||||||||||  | |||||||||| |||||||||||||| ||||| |||||||||    
T  42405678 tttatgagtccttttacttgtaaggtgttcaacctttactattttatccgatgttggacatataactcacacttgtacacaacaa 42405762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 42508688 - 42508604
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| |||||||||| |  |||| ||||||||||| |||||||||||||||| |||||| ||| ||||| |||||||||    
T  42508688 tttatgagtcctcttacttattagatgtttaacctttacttttctatccgatgtgggatatataattcacacttgtacacaacaa 42508604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 11417070 - 11417141
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | |||||||||||| |||||||||||  |||||||||||||||    
T  11417070 tcttacttataaggtgttcaacctttactattttatccgatgtggaacatataactc--acttgcacacaacaa 11417141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 18603202 - 18603276
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttg 102  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | |||| |||||||||||||||||||| |||||    
T  18603202 tttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttg 18603276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 26074394 - 26074320
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttg 102  Q
    |||||| ||| |||||||||||| |||||||| ||||| || |||||| |||||||||||||||||||| |||||    
T  26074394 tttatgggtcctcttacttataaggtgttcaatctttagttttctatctgatgtgggacatataactcacacttg 26074320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 623899 - 623818
Alignment:
Q  23 ataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||| ||||||  ||| ||||||| ||||||||||||||||||||  | ||||||||||| ||||||||||||| |||||||    
T  623899 ataagtttatggctcaacttacttgtaaagtgttcaacctttactattatatccgatgtgagacatataactcacacttgca 623818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 26074688 - 26074607
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | |||||||| ||| |||||||||||| ||||| ||||||    
T  26074688 tttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatatggaacatataactcacacttgtacacaa 26074607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 3295426 - 3295509
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | |||||||||||| |||||| ||||| |||| ||||||||||    
T  3295426 tttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatat-actcacacttccacacaacaa 3295509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 9498736 - 9498804
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||| ||| |||||||||||| ||||||||||||||||  |||||| |||||| |||||||||||||    
T  9498736 tttatgggtcctcttacttataaggtgttcaacctttactattctatctgatgtgagacatataactca 9498804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 24489297 - 24489369
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||| |||| ||||| ||||||| ||| |||||| |||||||||||||||||||| ||||| ||||||||    
T  24489297 tcttactaataaggtgtttaaccttttcttttctatctgatgtgggacatataactcacacttgaacacaaca 24489369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 25328011 - 25327927
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||| ||||||  | |||||||||| |||||||||||||| ||||  |||||||||    
T  25328011 tttatgggtcctcttacttataaggtgttcaacttttactgttttatccgatgtaggacatataactcacacttagacacaacaa 25327927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 27502118 - 27502194
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||| ||||||||||  | ||||| ||||||||||||||||||| |||||||    
T  27502118 tttatgggtcctcttacttataaggtgtttaacctttactattttatccaatgtgggacatataactcacacttgca 27502194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 32487469 - 32487394
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||  ||||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  32487469 tttatgggtcctcttacttatag-gtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 32487394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 39309749 - 39309677
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||| |||||| ||||||||| |||||   | ||||||||||||||||||||||||||||||| ||||||||    
T  39309749 tcttatttataatgtgttcaacatttacccttttatccgatgtgggacatataactcatacttgtacacaaca 39309677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 41170710 - 41170642
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||| ||| ||||||||||||  |||||||||||||||  | |||||||||||||||||||||||||    
T  41170710 tttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactca 41170642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 38427610 - 38427556
Alignment:
Q  42 tacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||||||  |||||||||||||||| ||||||| |||||||||||||||||||    
T  38427610 tacttataagatgttcaacctttacttttctatccaatgtgggacatataactca 38427556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 2411091 - 2411010
Alignment:
Q  20 gcaataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatactt 101  Q
    ||||||| |||||| ||  ||||||||| ||  |||||||| ||||||||||||||| |||| |||||||||||||| ||||    
T  2411091 gcaataagtttatgggttctcttacttacaagatgttcaacttttacttctctatccaatgtaggacatataactcacactt 2411010  T

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Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 6500515 - 6500451
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||||||||| ||||||||||||||||  | |||||||||| |||||||||||||| |||||||    
T  6500515 tcttacttataaggtgttcaacctttactattttatccgatgt-ggacatataactcacacttgca 6500451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 5723853 - 5723949
Alignment:
Q  9 caaaaccctaag-caataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    ||||||| |||| ||||||||| ||| ||  |||||| ||||| ||||||||| |||| |  | ||||||||||||||||||||||||| |||||||    
T  5723853 caaaaccttaagacaataaattaatgggttctcttacatataatgtgttcaacttttattattttatccgatgtgggacatataactcacacttgca 5723949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 36522001 - 36522061
Alignment:
Q  51 agtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||||||||  |||| |||||| |||||||||||||||||||| |||||| |||||||    
T  36522001 agtgttcaacctcaacttttctatctgatgtgggacatataactcacacttgcgcacaaca 36522061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 6500925 - 6500823
Alignment:
Q  2 tcttatgcaaaaccctaag-caataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatact 100  Q
    |||||| ||||||| |||| |||| | |||||| ||| | ||| |||||| ||||||||||||||||  | |||||||||| |||||||||||||| |||    
T  6500925 tcttatccaaaaccttaaggcaatgagtttatgggtccttttatttataaggtgttcaacctttactattttatccgatgt-ggacatataactcacact 6500827  T
Q  101 tgca 104  Q
    ||||    
T  6500826 tgca 6500823  T

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Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 301024 - 300954
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||||||||| || |||||||||||||  | |||| ||||||||||||||||| || ||||| ||||||    
T  301024 tcttacttataaggtattcaacctttactgttttatctgatgtgggacatataacccacacttgtacacaa 300954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 31509807 - 31509745
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatat 90  Q
    |||||||||| ||| |||||||||||| |||||||  |||| ||||||||||||| |||||||    
T  31509807 tttatgagtcctctcacttataaagtgctcaacctccacttttctatccgatgtgagacatat 31509745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 33747836 - 33747783
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataa 92  Q
    ||||||||||||||| || ||||||||||  | |||||||||||||||||||||    
T  33747836 tcttacttataaagtatttaacctttactattttatccgatgtgggacatataa 33747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 35150775 - 35150739
Alignment:
Q  76 cgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||||||||||||||| |||||||||||||||    
T  35150775 cgatgtgggacatataactcacacttgcacacaacaa 35150739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 35151066 - 35151030
Alignment:
Q  76 cgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||||||||||||||| |||||||||||||||    
T  35151066 cgatgtgggacatataactcacacttgcacacaacaa 35151030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 36527202 - 36527250
Alignment:
Q  65 acttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    |||| |||||| |||||||||||||||||||| ||||| ||||||||||    
T  36527202 acttttctatctgatgtgggacatataactcacacttgtacacaacaat 36527250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 42524793 - 42524719
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttg 102  Q
    ||||||||||| ||||| | ||||  |||||||| ||||||| ||||||||||||| ||||||||| ||| |||||    
T  42524793 atttatgagtcctcttattcataagatgttcaac-tttacttttctatccgatgtgagacatataattcacacttg 42524719  T

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Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 26590990 - 26591068
Alignment:
Q  26 aatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    ||||||||  || |||||||||||| ||||||||||||||||| || || |||| ||| |||| ||| ||| |||||||    
T  26590990 aatttatggatcctcttacttataaggtgttcaacctttacttttcgattcgatatggaacatttaaatcacacttgca 26591068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 7768913 - 7768852
Alignment:
Q  41 ttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttg 102  Q
    |||||||||| |||||||||||||| |  | |||||||||| ||| |||||||||| |||||    
T  7768913 ttacttataaggtgttcaacctttattattttatccgatgtaggatatataactcacacttg 7768852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 13786076 - 13786136
Alignment:
Q  21 caataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtg 82  Q
    ||||| ||||| | ||||||||||||||||||||||||||| | |||| | |||||||||||    
T  13786076 caatagatttacgggtcatcttacttataaagtgttcaaccatcactt-tttatccgatgtg 13786136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 29549337 - 29549413
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||  ||||||| ||||||||  | |||| ||| ||| |||||||||||| |||||||    
T  29549337 tttatgggtcttcttacttatatggtgttcatcctttactattttatctgatatggaacatataactcacacttgca 29549413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 21832425 - 21832508
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| ||||    
T  21832425 tttatgagtcctcttacttataaggtgttcaacctttacttttctatccaatgtgggacatataactcacacttgcacataaca 21832508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 54017898 - 54017983
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    |||||||||| |||||||||||| ||||||||||||||||  | |||||||||| |||||||||||||| ||||||||||||||||    
T  54017898 tttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaat 54017983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 7767396 - 7767476
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacaca 108  Q
    |||||||||| ||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  7767396 tttatgagtcctcttagttataaagtgtccaacctttacttttctatccgatgtgggacatataactcagacttacacaca 7767476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 9240226 - 9240142
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||| ||| |||||||||||| ||||||| | |||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  9240226 atttatgggtcctcttacttataaggtgttcagcttttacttctctatccgatgtggaacatataactcacacttgcacacaaca 9240142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 12114644 - 12114728
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| | |||||||||||||||    
T  12114644 tttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggatatataacttacacttgcacacaacaa 12114728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 35946598 - 35946515
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| ||||| ||||||||    
T  35946598 tttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgtacacaaca 35946515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 32462982 - 32463067
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaaccttt-acttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| |||||||||||| || |||||||||| |||  ||||||||||||||||||||||||||| ||||| |||||||||    
T  32462982 tttatgagtcttcttacttataaggtattcaaccttttactcttctatccgatgtgggacatataactcacacttgtacacaacaa 32463067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 42342469 - 42342554
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||| ||| |||||||||||| ||||| ||||||||||  | |||| |||||||||||||||||||| |||||||||||||||    
T  42342469 atttatgggtcctcttacttataaggtgttgaacctttactcttttatcggatgtgggacatataactcacacttgcacacaacaa 42342554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 50612533 - 50612610
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    ||||||||||| |||||||||||| |||||||| |||||||  | ||||||||||||||||||||||||| |||||||    
T  50612533 atttatgagtcctcttacttataaggtgttcaatctttactattttatccgatgtgggacatataactcacacttgca 50612610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 29644984 - 29645068
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||| ||||||||||  | ||||||||||||||||||||||| | |||||||||||||||    
T  29644984 tttatgggtcctcttacttataaggtgtttaacctttactcttttatccgatgtgggacatataacttacacttgcacacaacaa 29645068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 33175757 - 33175829
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||||||| ||||||||||||||||| |||||| |||||| ||||||||||||| ||||| ||||||||    
T  33175757 tcttacttataaggtgttcaacctttacttttctatctgatgtgagacatataactcacacttgtacacaaca 33175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 37990721 - 37990805
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| |||||||||||| ||||||||| ||||||  | |||||||||||| |||||||||||| ||||| |||||||||    
T  37990721 tttatgagtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacacttgtacacaacaa 37990805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 49336769 - 49336853
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||| ||||||||||||| ||||||||||||| ||||| ||||||| ||||| |||||||||    
T  49336769 tttatgggtcctcttacttataaggtggtcaacctttacttttctatccgatgtgagacatgtaactcacacttgtacacaacaa 49336853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 15772957 - 15772846
Alignment:
Q  2 tcttatgcaaaaccctaa-gcaataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatact 100  Q
    |||||| ||||||| ||| ||||| | |||||| ||| |||||||||||| ||||||||| ||||||  | |||||||| |||||||||||||||| |||    
T  15772957 tcttatccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacatttactcttttatccgatatgggacatataactcacact 15772858  T
Q  101 tgcacacaacaa 112  Q
    ||||||| ||||    
T  15772857 tgcacacgacaa 15772846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 15773267 - 15773184
Alignment:
Q  29 ttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||| ||||||||||||  |||||||| ||||||  | ||| ||||||||||||||||||||| |||||||||||||||    
T  15773267 ttatgagtcctcttacttataagatgttcaacttttactcttttattcgatgtgggacatataactcacacttgcacacaacaa 15773184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 33803334 - 33803417
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| |||||||||||  ||||||||||||||||  | ||||||||||||||||||||||||| | ||||||||||||    
T  33803334 tttatgggtcctcttacttatatggtgttcaacctttactattttatccgatgtgggacatataactcacaattgcacacaaca 33803417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 25739497 - 25739591
Alignment:
Q  18 aagcaataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||| | |||||| ||| |||||||||||   |||||||| ||||||  | ||||||||||||||||||||||||| |||||||||||||||    
T  25739497 aagcaatgagtttatgggtcctcttacttatatgatgttcaacttttactattttatccgatgtgggacatataactcacacttgcacacaacaa 25739591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 29644674 - 29644744
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||||||||| ||||||||||||||||  |  |||||||||||||||||||||||| ||||||||||||    
T  29644674 tcttacttataaggtgttcaacctttactctttaatccgatgtgggacatataactcacacttgcacacaa 29644744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 31190091 - 31190009
Alignment:
Q  30 tatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||| ||| ||| |||||||| ||||||||||||||||  | ||||||||||||||||||| ||||| |||||||||||||||    
T  31190091 tatgggtcctctaacttataaggtgttcaacctttactcttttatccgatgtgggacatatcactcacacttgcacacaacaa 31190009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 1634396 - 1634477
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaaccttt-acttctctatccgatgtgggacatataactcatacttgcacaca 108  Q
    |||||| ||| |||||||||||| ||||| ||||||| | || ||||||||||||||||||||||||||| |||||||||||    
T  1634396 tttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatgtgggacatataactcacacttgcacaca 1634477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 25755471 - 25755386
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||||| |||||||||||| || |||||||||||||  | |||| |||||| ||||||||||||| ||||| |||||||||    
T  25755471 atttatgagtcctcttacttataaggtattcaacctttactcttttatctgatgtgagacatataactcacacttgtacacaacaa 25755386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 43346884 - 43346957
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | |||| |||||||||||||||||||| ||||| |||||||||    
T  43346884 tcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgtacacaacaa 43346957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 45901790 - 45901705
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctct-atccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| |||||||||||||  |||| | |||||||||||||||||||||||| ||||| |||||||||    
T  45901790 tttatgcgtcctcttacttataaggtgttcaacctttttttcttttatccgatgtgggacatataactcacacttgtacacaacaa 45901705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 52634741 - 52634668
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| | ||||||||||||||  | ||||||||||||||||||||||||| ||||| |||||||||    
T  52634741 tcttacttataaggcgttcaacctttactgttttatccgatgtgggacatataactcacacttgtacacaacaa 52634668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 39336301 - 39336392
Alignment:
Q  18 aagcaataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    ||||||| | ||||||  || ||| ||||||||||||||||||||  |  | ||||||||||||||||||||||||||| ||||||||||||    
T  39336301 aagcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccgatgtgggacatataactcacacttgcacacaa 39336392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 37991070 - 37991143
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | ||||| ||||| ||||||||||||| ||||| |||||||||    
T  37991070 tcttacttataaggtgttcaacctttactattttatccaatgtgagacatataactcacacttgtacacaacaa 37991143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 8327969 - 8327897
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||||||||  | |||| ||||||||  | ||||||||||||||||||||||||| ||||||||||||||    
T  8327969 tcttacttataagatattcatcctttactcttttatccgatgtgggacatataactcacacttgcacacaaca 8327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 12747871 - 12747919
Alignment:
Q  65 acttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  12747871 acttttctatccgatgtgggacatataactcacacttgcacacaacaat 12747919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 22304645 - 22304569
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| || |||||||||||||  | |||||||||||||||||||| |||| |||||||    
T  22304645 tttatgggtcctcttacttataaggtattcaacctttactattttatccgatgtgggacatatagctcacacttgca 22304569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 32462613 - 32462725
Alignment:
Q  2 tcttatgcaaaaccctaa-gcaataaatttatgagtcatcttacttataaagtgttcaacctttacttctct-atccgatgtgggacatataactcatac 99  Q
    |||||| ||||||| ||| ||||||  ||||||  ||||||||||||||| |||||||||||||   ||| | || ||||||||||||||||||||| ||    
T  32462613 tcttatccaaaaccttaaagcaataggtttatggatcatcttacttataaggtgttcaaccttttactctttcattcgatgtgggacatataactcacac 32462712  T
Q  100 ttgcacacaacaa 112  Q
    ||| |||||||||    
T  32462713 ttgtacacaacaa 32462725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 39914328 - 39914244
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| ||||| |||||| ||||||||||| ||||  | |||| |||||| ||||||||||||| |||||||||||||||    
T  39914328 tttatgggtcctcttatttataaggtgttcaacctctactgttttatctgatgtgagacatataactcacacttgcacacaacaa 39914244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 43346702 - 43346642
Alignment:
Q  52 gtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||||||||||  | |||||||||||||||||| |||||| |||||||||||||||    
T  43346702 gtgttcaacctttactattttatccgatgtgggacatacaactcacacttgcacacaacaa 43346642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 54018280 - 54018364
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| |||||||| |||||||  | |||||||||  |||||||||||||| ||||||||| |||||    
T  54018280 tttatgggtcctcttacttataaggtgttcaatctttactcttttatccgatgcaggacatataactcacacttgcacataacaa 54018364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 42584915 - 42584970
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataact 94  Q
    |||||||||||| |||||||| |||||||  |||||||||||||||||||||||||    
T  42584915 tcttacttataaggtgttcaatctttactcttctatccgatgtgggacatataact 42584970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 45395746 - 45395821
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaatt 114  Q
    |||||||||||| ||||| ||||||||||  | ||| |||||||||| |||||||| | |||||||||||||||||    
T  45395746 tcttacttataacgtgtttaacctttactcttttattcgatgtgggatatataacttacacttgcacacaacaatt 45395821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 53577415 - 53577356
Alignment:
Q  53 tgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||||||  | ||||||||||| ||||||||||||| |||||||||||||||    
T  53577415 tgttcaacctttactgttttatccgatgtgtgacatataactcacacttgcacacaacaa 53577356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 53118071 - 53118140
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||| ||||||||||||||||  | |||||||| ||| |||||||||||| |||||| ||||||||    
T  53118071 acttataaggtgttcaacctttactcttttatccgatatggaacatataactcacacttgcccacaacaa 53118140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 3135168 - 3135237
Alignment:
Q  41 ttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| ||||||||| ||||||  | ||||||||||||||||||||||||  ||||| |||||||||    
T  3135168 ttacttataaggtgttcaacatttactattttatccgatgtgggacatataactc--acttgtacacaacaa 3135237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 22304298 - 22304246
Alignment:
Q  52 gtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    ||||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  22304298 gtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 22304246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 32589779 - 32589696
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| |||||||||||||| |  | ||||  ||||||||||||| ||||| |||||||||||||||    
T  32589779 tttatgggtcctcttacttataaggtgttcaacctttattattttatcttatgtgggacatat-actcacacttgcacacaacaa 32589696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 39389146 - 39389070
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| ||||| || ||| ||||||||||||||||  | |||||||||| |||||||||||||| |||||||    
T  39389146 tttatgggtcctcttagttttaaggtgttcaacctttactattttatccgatgtaggacatataactcacacttgca 39389070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 39935048 - 39935104
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactc 95  Q
    |||||||||||| ||||||||||||||||  | |||||||||| |||||||||||||    
T  39935048 tcttacttataaggtgttcaacctttactcttttatccgatgtaggacatataactc 39935104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 33809101 - 33809176
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaatt 114  Q
    ||||||| |||||||||||||  |  | || |||||| |||||||||||||||||| | |||||||||||||||||    
T  33809101 tcttactcataaagtgttcaatatgcaattttctatctgatgtgggacatataacttacacttgcacacaacaatt 33809176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 41359847 - 41359927
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| || |||||||||||||  | |||||||||||||    |||||||| |||||||||||||||    
T  41359847 tttatgggtcctcttacttataaggtattcaacctttactattgtatccgatgtggg----ataactcacacttgcacacaacaa 41359927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 47964600 - 47964683
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| ||| ||||||| || |||||||||  || | ||||||||||| |||||||| |||||| ||||||||||||||    
T  47964600 tttatgggtcctctcacttatatagcgttcaacctccacatttctatccgatgcgggacatacaactcacacttgcacacaaca 47964683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 47508174 - 47508248
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttg 102  Q
    |||||||||||||| |||||||||||||| ||| ||||||| || ||||||| |  ||||||| ||||| |||||    
T  47508174 tttatgagtcatctcacttataaagtgttgaacatttacttttccatccgatataagacatattactcacacttg 47508248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 11661600 - 11661531
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacaca 108  Q
    ||||||||||||  |||| |||| |||||  | ||||||||||||||||||||||||| ||||| |||||    
T  11661600 tcttacttataagatgtttaaccgttactattttatccgatgtgggacatataactcacacttgtacaca 11661531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 36986045 - 36986098
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||||||||  |||||||| |||| ||||| |||||||||||||||||||||    
T  36986045 acttataaagttctcaaccttcacttttctattcgatgtgggacatataactca 36986098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 37011484 - 37011537
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||||||||  |||||||| |||| ||||| |||||||||||||||||||||    
T  37011484 acttataaagttctcaaccttcacttttctattcgatgtgggacatataactca 37011537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 37726569 - 37726504
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||||||||| || |||||| ||||||  | ||||||||||| ||||||||||||| |||||||    
T  37726569 tcttacttataaggtattcaacatttactattttatccgatgtgagacatataactcacacttgca 37726504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 42342172 - 42342256
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| |||||||||||| |  || ||| ||||||  | |||||||||||| |||||| | ||| |||||||||||||||    
T  42342172 tttatgagtcctcttacttataaggcattgaacatttactcttttatccgatgtggaacatatgaatcacacttgcacacaacaa 42342256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 46546422 - 46546490
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||||||||||||||||  || | || |||| |||| |||||||||||||| |||| |||||||||    
T  46546422 acttataaagtgttcaacctccacatttcaatccaatgtaggacatataactcacacttacacacaaca 46546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 51886637 - 51886561
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||   |||||||||||||||  | ||| ||||||| ||||||||||||| |||||||    
T  51886637 tttatgggtcctcttacttatatgatgttcaacctttactattttattcgatgtgagacatataactcacacttgca 51886561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 3384348 - 3384427
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacac 107  Q
    |||||| ||| |||| ||||||||||||| ||||| ||||  | ||||  |||||||||||||||||||  |||||||||    
T  3384348 tttatgggtcctcttccttataaagtgtttaacctatactgttttatcatatgtgggacatataactcacgcttgcacac 3384427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 47964998 - 47965080
Alignment:
Q  29 ttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||| | ||| ||||||| | |||| |||||  |||| ||||||||||||   |||||||||||| ||||||||||||||    
T  47964998 ttatgagccctctcacttatataatgtttaacctccacttttctatccgatgtaaaacatataactcacacttgcacacaaca 47965080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 3135562 - 3135627
Alignment:
Q  47 ataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||| ||||||||| ||||||  | |||| || ||||||||||||||||| ||||| |||||||||    
T  3135562 ataaggtgttcaacttttactcttttatctgaggtgggacatataactcacacttgtacacaacaa 3135627  T

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Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 22304061 - 22304114
Alignment:
Q  59 acctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||  | |||| |||||||||||||||||||| ||||| |||||||||    
T  22304061 acctttactattttatctgatgtgggacatataactcacacttgtacacaacaa 22304114  T

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Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 2300015 - 2299967
Alignment:
Q  65 acttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    |||| |||||| || |||||||||||||| || ||||||||||||||||    
T  2300015 acttttctatctgacgtgggacatataacccacacttgcacacaacaat 2299967  T

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Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 4823731 - 4823655
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| || ||||||||| ||||| ||| ||||||  | ||||||||||| ||| ||||||||| |||||||    
T  4823731 tttatgggtcctcctacttataaggtgtttaacttttactattttatccgatgtgagacttataactcacacttgca 4823655  T

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Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 11662027 - 11661943
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||| | ||| |||| ||| ||||||||||||||||  | ||||| ||||||| ||| ||||||| |||| || |||||||    
T  11662027 tttatgaggcctctcacttttaaggtgttcaacctttactcttttatccaatgtggggcatttaactcacacttacatacaacaa 11661943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 22077577 - 22077660
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  22077577 tttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataactcacacttgcacacaaca 22077660  T

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Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 39066255 - 39066366
Alignment:
Q  2 tcttatgcaaaaccctaag-caataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatact 100  Q
    |||||| ||||||| |||| |||| | |||||| ||||||||| |||||| ||||||||||||||||| |||||||||||||| | |||||||||| |||    
T  39066255 tcttatccaaaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaacctttacttttctatccgatgtggaatatataactcacact 39066354  T
Q  101 tgcacacaacaa 112  Q
    ||||||||||||    
T  39066355 tgcacacaacaa 39066366  T

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Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 17294653 - 17294569
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||| ||||| |||||||||    
T  17294653 tttatgggtcctcttacttataaagtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaa 17294569  T

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Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 41184507 - 41184591
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||||||||||||||||||||  | ||||||||||| ||||||||||||| |||||||||||||||    
T  41184507 tttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaa 41184591  T

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Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 24600396 - 24600479
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||||  ||||||||||||  |||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  24600396 tttatgagttctcttacttataatatgttcaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 24600479  T

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Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 66565 - 66638
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||| |||||||||||| |||||||||||||||    
T  66565 tcttacttataaggtgttcaacctttacttttctatccgatatggaacatataactcacacttgcacacaacaa 66638  T

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Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 34364572 - 34364499
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | ||||||||||| ||||||||||||| |||||||||||||||    
T  34364572 tcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaa 34364499  T

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Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 41157451 - 41157366
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    |||||| ||| |||||||||||| ||||||||| ||||||  | |||| |||||||||||||||||||| ||||||||||||||||    
T  41157451 tttatgggtcctcttacttataaggtgttcaacttttactcttttatctgatgtgggacatataactcacacttgcacacaacaat 41157366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 3537229 - 3537305
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  3537229 tttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 3537305  T

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Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 3875413 - 3875497
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| |||||||||||| |||| |||||||||||| | ||||||||||| ||||||||||| |  ||||||||||||||    
T  3875413 tttatgagtcctcttacttataaggtgtacaacctttacttttttatccgatgtgtgacatataactgactcttgcacacaacaa 3875497  T

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Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 5320047 - 5320131
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| ||| |||||||| ||||||||| ||||||| |||||||||||||| |||||||||||| ||||||| |||||||    
T  5320047 tttatgggtcctctcacttataaggtgttcaacttttacttttctatccgatgtggaacatataactcacacttgcatacaacaa 5320131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 29798275 - 29798191
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| |||||||||||| ||||||||||||||||  | ||||| |||| |||||||||||||| ||||||| |||||||    
T  29798275 tttatgagtcctcttacttataaggtgttcaacctttactattttatccaatgtaggacatataactcacacttgcatacaacaa 29798191  T

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Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 34365001 - 34364917
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| |||||||||||||| |  | ||||||||||| ||||||||||||| |||||||||||||||    
T  34365001 tttatgggtcctcttacttataaggtgttcaacctttattattttatccgatgtgtgacatataactcacacttgcacacaacaa 34364917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 40082490 - 40082399
Alignment:
Q  20 gcaataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||| ||||||||| || |||||||||||| ||||||||||||||||  | |||||||||| |||||||||||||| |||||| ||||||||    
T  40082490 gcaatgaatttatga-tcctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactcacacttgcgcacaacaa 40082399  T

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Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 41142448 - 41142364
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| | |||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| ||||||||| |||||    
T  41142448 tttatgggtccttttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgcacagaacaa 41142364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 44290907 - 44290983
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  44290907 tttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 44290983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 3550796 - 3550721
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgc 103  Q
    |||||||||| |||||||||||| ||||||||||||||||  | |||| |||||||||||||||||||| ||||||    
T  3550796 tttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgc 3550721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 22793339 - 22793268
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaatt 114  Q
    ||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||| |||||| ||||||||||    
T  22793339 acttataaagttttcaacctctacttttctatacgatgtgggacatataactcacacttgctcacaacaatt 22793268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 45084457 - 45084378
Alignment:
Q  29 ttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacaca 108  Q
    ||||| ||| |||||||||||| ||||||||||||||||  | |||||||||||||| |||||||||| |||||||||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggagatataactcacacttgcacaca 45084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 41157077 - 41156983
Alignment:
Q  18 aagcaataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||| | |||||| ||| |||||||||||| ||||||||||||||||  | |||||| | |||||||||||| ||| |||||||||||||||    
T  41157077 aagcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgttatgggacatataattcacacttgcacacaacaa 41156983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 1188660 - 1188753
Alignment:
Q  18 aagcaataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||| | |||||||||| ||| ||||||||| | ||||||||  |||| |||||||||| ||| |||||||||||| ||||||||||||||    
T  1188660 aagcaatgagtttatgagtcttctcacttataaaatattcaacctccacttttctatccgatatggaacatataactcacacttgcacacaaca 1188753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 31767254 - 31767327
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | |||||||||||| ||||||||| || |||||||||||||||    
T  31767254 tcttacttataaggtgttcaacctttactgttttatccgatgtggaacatataacccacacttgcacacaacaa 31767327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 37850693 - 37850766
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||| ||||  | ||| ||||||||||||||||||||| |||||||||||||||    
T  37850693 tcttacttataaggtgttcaacctctactgttttatgcgatgtgggacatataactcacacttgcacacaacaa 37850766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 44685522 - 44685449
Alignment:
Q  39 tcttacttataaagtgttcaa-cctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||||||| || ||||| ||||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  44685522 tcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 44685449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 21378123 - 21378207
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| ||||||||||||  | |||||||||||||  |||||||||| |||||||||||||| | |||||||||||||||    
T  21378123 tttatgggtcctcttacttataagatattcaacctttactgttctatccgatctgggacatataactgacacttgcacacaacaa 21378207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 26661604 - 26661688
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| ||| |||||||| ||||||||||||||||  | || |||||||||||||||||||||| ||||| |||||||||    
T  26661604 tttatgggtcctctcacttataaggtgttcaacctttactcttttacccgatgtgggacatataactcacacttgtacacaacaa 26661688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 44290540 - 44290616
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| ||||||||||||  |||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  44290540 tttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacacttgca 44290616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 24132079 - 24132150
Alignment:
Q  40 cttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||| |||||| ||||||||||||||||| ||||||||||| ||||||||||||||| | ||||| ||||||    
T  24132079 cttatttataaggtgttcaacctttacttttctatccgatgagggacatataactcacagttgcatacaaca 24132150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 37556177 - 37556103
Alignment:
Q  39 tcttacttataaagtgttcaacctttact-tctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||||||  ||||||||||||||| | | ||||||||||||||||||||||||| ||||| |||||||||    
T  37556177 tcttacttataagatgttcaacctttactatttttatccgatgtgggacatataactcacacttgtacacaacaa 37556103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 45839708 - 45839619
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttc-----aacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||| ||| |||||||||||| ||||||     |||||||| || ||||||||||||||||||||||||||||||||| |||||||||    
T  45839708 atttatgggtcttcttacttataaggtgttcgattcaacctttattt-tctatccgatgtgggacatataactcatacttgtacacaacaa 45839619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 50469180 - 50469246
Alignment:
Q  45 ttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||||||||||||||||||||   |||| ||||| |||||||||||||| ||||||||||||||    
T  50469180 ttataaagtgttcaacctttactttattatctgatgtaggacatataactcacacttgcacacaaca 50469246  T

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Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 66169 - 66254
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaa-cctttacttctctatccgatgtgggacat-ataactcatacttgcacacaaca 111  Q
    |||||| ||| |||||||||||| |||||||| ||||||||| ||||||||||||| ||||| || ||||| ||||||||||||||    
T  66169 tttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgtgagacatgattactcacacttgcacacaaca 66254  T

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Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 34649499 - 34649430
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||| ||||||||||||||||  | ||||||||||||||||||||||||| ||||| | |||||||    
T  34649499 acttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtatacaacaa 34649430  T

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Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 41759560 - 41759483
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||||  ||||||||||||||| ||||||||| ||||||  | ||||||||||| ||||||||||||| |||||||    
T  41759560 atttatggatcatcttacttataaggtgttcaacttttactattttatccgatgtgtgacatataactcacacttgca 41759483  T

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Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 50052105 - 50052178
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatactt 101  Q
    |||||| ||| ||||||||||||  |||||||||||||||  | ||||||||||||||||||||||||| ||||    
T  50052105 tttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacactt 50052178  T

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Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 11977356 - 11977276
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacaca 108  Q
    |||||||||  |||||||||||| ||||||||| ||||||  | || |||||||||||||||||||||| ||||| |||||    
T  11977356 tttatgagtgctcttacttataaggtgttcaacatttactgttttacccgatgtgggacatataactcacacttgtacaca 11977276  T

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Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 14318951 - 14318875
Alignment:
Q  20 gcaataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||| ||||||| ||| |||||||||||| ||||||||||||||||  | ||||||| |||| ||||||||||||    
T  14318951 gcaatagatttatgggtcttcttacttataaggtgttcaacctttactattttatccgacgtggaacatataactca 14318875  T

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Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 32594798 - 32594874
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | |||| ||||| |||||||||||||| |||||||    
T  32594798 tttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtaggacatataactcacacttgca 32594874  T

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Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 48588562 - 48588646
Alignment:
Q  20 gcaataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    ||||| |||||| | ||| |||||||||||| ||||||||||||||||  | |||||||||| ||||||| |||||| |||||||    
T  48588562 gcaatgaatttacgggtcttcttacttataaggtgttcaacctttactattttatccgatgtcggacatagaactcacacttgca 48588646  T

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Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 5575169 - 5575097
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    |||||||||||| ||||||||||||||||  ||||||||| ||||||||||||| ||  || |||||||||||||    
T  5575169 tcttacttataaggtgttcaacctttactcttctatccgacgtgggacatataattc--acatgcacacaacaat 5575097  T

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Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 19283537 - 19283620
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| ||| | ||| |||||| |||||||  |||| |||||||| |||||||||||||||||| ||||||||||||||    
T  19283537 tttatgtgtcctctcatttacaaagtgctcaacctccacttttctatccggtgtgggacatataactcacacttgcacacaaca 19283620  T

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Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 9955973 - 9955899
Alignment:
Q  39 tcttacttataaagtgttcaacctttac-ttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||| || | |||| |||||||||||||||||||| |||  ||||||||||    
T  9955973 tcttacttataatgtgttcaacctttactttttttatctgatgtgggacatataactcacactaacacacaacaa 9955899  T

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Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 38804448 - 38804522
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    |||||||||||| ||||||||||||||||  | ||| ||||||||||| ||||||||| ||||| | ||||||||    
T  38804448 tcttacttataatgtgttcaacctttactcttttattcgatgtgggacgtataactcacacttgtaaacaacaat 38804522  T

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Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 22077246 - 22077287
Alignment:
Q  70 tctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  22077246 tctatccgatgtgggacatataactcacacttgcacacaaca 22077287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 22077910 - 22077991
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||| ||| ||||||||||||  ||||||||||||| || |||||||||| |   |||||||||||| ||||||||||||    
T  22077910 tttatgggtcctcttacttataagatgttcaacctttatttttctatccgatttaaaacatataactcacacttgcacacaa 22077991  T

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Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 26661980 - 26662064
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| ||| |||||||| ||||||||||||||||  | |||| ||| ||||| |||||||||| ||||| |||||||||    
T  26661980 tttatgggtcttctcacttataaggtgttcaacctttactcttttatctgatatgggatatataactcacacttgtacacaacaa 26662064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 30630731 - 30630803
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||||||||||||  |||||||| || | ||||||||||| ||||||||| ||| ||||||||| ||||    
T  30630731 tcttacttataaagtgtcaaacctttaattttttatccgatgtgagacatataaatcacacttgcacataaca 30630803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 3537692 - 3537747
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataact 94  Q
    ||||||| |||| ||||||||||||||||  | |||||||||||||||||||||||    
T  3537692 tcttactcataaggtgttcaacctttactattttatccgatgtgggacatataact 3537747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 35154150 - 35154205
Alignment:
Q  57 caacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||  | |||| |||||||||||||||||||| |||||||||||||||    
T  35154150 caacctttactcttttatctgatgtgggacatataactcacacttgcacacaacaa 35154205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 5528836 - 5528902
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataact 94  Q
    |||||||||| ||||| ||||||  |||||||||||||||  | ||||||||||| |||||||||||    
T  5528836 tttatgagtcctcttatttataagatgttcaacctttactcttttatccgatgtgagacatataact 5528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 47379889 - 47379943
Alignment:
Q  50 aagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||||||||||  |||| |||||||||||||||| |||||||||| |||||||    
T  47379889 aagtgttcaacctccacttttctatccgatgtgggatatataactcacacttgca 47379943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 37555795 - 37555722
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| || ||||||||| |||  | ||||||||||||||| ||||||||| ||||  |||||||||    
T  37555795 tcttacttataatgtattcaaccttcactattttatccgatgtgggacttataactcacacttttacacaacaa 37555722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 4878864 - 4878796
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||||| ||||||| ||| |||  | |||||||||||| |||||||||||| | ||||||||||||    
T  4878864 acttataaaatgttcaagcttcactattttatccgatgtggaacatataactcacaattgcacacaaca 4878796  T

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Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 22077192 - 22077243
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgat 79  Q
    |||||| ||| |||||||||||| || |||||||||||||| ||||||||||    
T  22077192 tttatgggtcctcttacttataaggtattcaacctttacttttctatccgat 22077243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 1187446 - 1187527
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||| ||| ||| ||||||||| |||| |||||  |||| | ||| ||||||| ||||||||| ||| ||||||||||||    
T  1187446 tttatgggtcttctcacttataaaatgtttaacctccacttttatattcgatgtgagacatataattcacacttgcacacaa 1187527  T

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Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 45494084 - 45494137
Alignment:
Q  52 gtgttcaacctttacttctctatccgatgtgggacatat-aactcatacttgca 104  Q
    ||||||||||||||||  | ||||||||||||||||||| |||||| |||||||    
T  45494084 gtgttcaacctttactattttatccgatgtgggacatataaactcacacttgca 45494137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 11787003 - 11786951
Alignment:
Q  189 ttagctttcaattatgtattgatgcaccgttttgtattcatgacttattatct 241  Q
    ||||||| ||||||| |||||||| ||||| ||||||| | ||||||||||||    
T  11787003 ttagcttccaattatttattgatgtaccgtcttgtattaacgacttattatct 11786951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 50051777 - 50051809
Alignment:
Q  72 tatccgatgtgggacatataactcatacttgca 104  Q
    ||||||||||||||||||||||||| |||||||    
T  50051777 tatccgatgtgggacatataactcacacttgca 50051809  T

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Target: scaffold0078 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 5433 - 5349
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  |||||||||||||| |||||||||||| |||||||||||||||    
T  5433 tttatgggtcctcttacttataaggtgttcaacctttactgttctatccgatgtggaacatataactcacacttgcacacaacaa 5349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 5058 - 4974
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| | ||||||||||  | || ||||||||||  ||| ||||||||| ||||||||| ||| |||||||||||||||    
T  5058 tttatgggtctttttacttataagatattaaacctttactgttctctccgatgtgagacatataattcacacttgcacacaacaa 4974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 7e-24; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 2579954 - 2580038
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||||||||||    
T  2579954 tttatgggtcctcttacttataatgtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcacacaacaa 2580038  T

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Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 10074445 - 10074528
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||| | ||||||| ||||||||||||||    
T  10074445 tttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggacctctaactcacacttgcacacaaca 10074528  T

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Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 10074073 - 10074156
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| |||||||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||  |||||||||||||    
T  10074073 tttatgggtcctcttacttataaggtgttcaacgtttacttttctatccgatgtgggatatataactcacccttgcacacaaca 10074156  T

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Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 593791 - 593868
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcac 105  Q
    |||||||||| |||||||||||| ||||||||||||||||  | |||||||||||||||||| |||||| ||||||||    
T  593791 tttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatacaactcacacttgcac 593868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 6071200 - 6071123
Alignment:
Q  36 tcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    |||||| ||||||||||||||||||||  |||| ||||| | ||||||||||||||||||| ||||||||||||||||    
T  6071200 tcatctcacttataaagtgttcaacctccacttttctattcaatgtgggacatataactcacacttgcacacaacaat 6071123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 2378202 - 2378126
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  2378202 tttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 2378126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 2578525 - 2578608
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||||||||||||||||||||  | |||||| |||||||||||||||||| ||||| |||||||||    
T  2578525 tttatgggtcctcttacttataaagtgttcaacctttactcttttatccg-tgtgggacatataactcacacttgtacacaacaa 2578608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 16107754 - 16107670
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| |||||||||||| ||||| ||||||||||| | |||||||||||  |||||||||||| ||||| |||||||||    
T  16107754 tttatgagtcctcttacttataaggtgtttaacctttacttttttatccgatgtgacacatataactcacacttgtacacaacaa 16107670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 26544125 - 26544049
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  26544125 tttatgggtcctcttacttataacgtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 26544049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 29518579 - 29518503
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  29518579 tttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 29518503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 29518996 - 29518920
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  29518996 tttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 29518920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 32741255 - 32741179
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  32741255 tttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 32741179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 8482002 - 8481918
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    |||||||||||||| | ||||||||||||||||||  |||| | |||| ||||| |||||||||||||| ||||||||||||||||    
T  8482002 tttatgagtcatctcatttataaagtgttcaacctccacttttatatctgatgt-ggacatataactcacacttgcacacaacaat 8481918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 10073709 - 10073779
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||||||| ||||||||||||||||| |||  |||||||||||||||||||| | ||||||||||||||    
T  10073709 tcttacttataaggtgttcaacctttacttttct--ccgatgtgggacatataactaacacttgcacacaaca 10073779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 2377830 - 2377746
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | || |||||||||||||||||||||| |||||  ||||||||    
T  2377830 tttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactcacacttgtgcacaacaa 2377746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 3409335 - 3409259
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | |||| |||||||||||||||||||| |||||||    
T  3409335 tttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgca 3409259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 9062431 - 9062499
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||||||| ||||||||||||  |||||||||||||||  | |||||||||||||||||||||||||    
T  9062431 tttatgagtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactca 9062499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 10911642 - 10911558
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttac-ttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||||| |||||||||||| ||||||||||||||| || | |||| ||||| |||||||||||||| ||||||| ||||||    
T  10911642 tttatgagtcctcttacttataaggtgttcaacctttactttttttatctgatgtaggacatataactcacacttgcatacaaca 10911558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 14748420 - 14748496
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| ||||| |||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  14748420 tttatgggtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 14748496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 32460662 - 32460730
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||||||| |||||||||||| ||||||||||||||||  | ||| |||||||||||||||||||||    
T  32460662 tttatgagtcctcttacttataaggtgttcaacctttactattttatacgatgtgggacatataactca 32460730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 35210280 - 35210204
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||| ||||||||||||| |||||||    
T  35210280 tttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacacttgca 35210204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 33605713 - 33605644
Alignment:
Q  45 ttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaatt 114  Q
    ||||||||||||||||||  |||| |||||| |||||| |||||||| |||| |||||||||||||||||    
T  33605713 ttataaagtgttcaacctccacttttctatctgatgtgagacatatagctcacacttgcacacaacaatt 33605644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 1127436 - 1127368
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||||||| |||||||||||| ||||||||||||||||  | || ||||||||||| ||||||||||    
T  1127436 tttatgagtcctcttacttataaggtgttcaacctttactattttacccgatgtgggatatataactca 1127368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 5832108 - 5832192
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||| ||||||||||||||||| | |||||  ||||||||    
T  5832108 tttatgggtcctcttacttataaggtgttcaacctttactcttttatccaatgtgggacatataacttacacttgtgcacaacaa 5832192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 16108139 - 16108055
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||| ||||||  | |||| ||||||| |||||||||||| ||||| |||||||||    
T  16108139 tttatgggtcctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactcacacttgtacacaacaa 16108055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 1950278 - 1950340
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatactt 101  Q
    |||||||| ||| ||||||||||||||||  | ||||||||||||||||||||||||| ||||    
T  1950278 tcttacttgtaaggtgttcaacctttactcttttatccgatgtgggacatataactcacactt 1950340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 3058288 - 3058226
Alignment:
Q  42 tacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    ||||||||| ||||||||||||||||  | ||||||||||||||||||||||| | |||||||    
T  3058288 tacttataaggtgttcaacctttactattttatccgatgtgggacatataactaacacttgca 3058226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 33606048 - 33605971
Alignment:
Q  31 atgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacaca 108  Q
    ||||||||| | | ||||||||||||||||||  |||| ||||| ||||||||||||||||||| | | |||||||||    
T  33606048 atgagtcatgtcaattataaagtgttcaacctccacttttctattcgatgtgggacatataacttacatttgcacaca 33605971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 2579203 - 2579271
Alignment:
Q  44 cttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||| ||||||||| ||||||  | ||||||||||||||||||||||| | ||||| |||||||||    
T  2579203 cttataaggtgttcaacttttactcttttatccgatgtgggacatataactaacacttgtacacaacaa 2579271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 12092579 - 12092647
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||||||| |||||||  |||| ||||||||||||||||||| |||| ||  |||||||||||||    
T  12092579 acttataaagtgctcaacctccacttttctatccgatgtgggacatctaacacacccttgcacacaaca 12092647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 16454651 - 16454567
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||| |||| |  | |||| ||||||||||| |||||||| ||||| |||||||||    
T  16454651 tttatgggtcctcttacttataaggtgttcaacttttattcttttatctgatgtgggacacataactcacacttgtacacaacaa 16454567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 16454983 - 16454899
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| | |||||||||| ||||||||||||||||  | |||| ||||||||||| |||||||| | ||| |||||||||    
T  16454983 tttatgggtcctattacttataaggtgttcaacctttactcttttatctgatgtgggacacataactcacatttgtacacaacaa 16454899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 17135151 - 17135219
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    ||||||| || |||| ||||||| || || ||| ||||||||||||||||||||| |||||||||||||    
T  17135151 tttatgaatcctcttgcttataaggtattaaacatttacttctctatccgatgtgagacatataactca 17135219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 1846851 - 1846748
Alignment:
Q  2 tcttatgcaaaaccctaag-caataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatact 100  Q
    |||||| ||||||| |||| ||||  ||||||| ||  |||||||||||| ||||||||||||||||  | ||||||||||| |||||| || ||| |||    
T  1846851 tcttatccaaaaccttaaggcaatggatttatgggtgctcttacttataaggtgttcaacctttactattttatccgatgtgagacatagaattcacact 1846752  T
Q  101 tgca 104  Q
    ||||    
T  1846751 tgca 1846748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 2975629 - 2975567
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacata 89  Q
    ||||||| |||||||| ||||||| ||||||||| ||||||| |||||  |||||||||||||    
T  2975629 atttatgggtcatcttgcttataaggtgttcaacatttacttttctatttgatgtgggacata 2975567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 6999889 - 6999951
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatactt 101  Q
    |||||| ||||| ||||||||| ||||||| | |||||||||| |||||||||||||| ||||    
T  6999889 tcttacatataaggtgttcaacttttacttttttatccgatgtaggacatataactcacactt 6999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 3409736 - 3409660
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| ||||||||||||  |||||||| ||||||  | |||| ||||||| |||||||||||| |||||||    
T  3409736 tttatgggtcctcttacttataagatgttcaacttttactattttatctgatgtggtacatataactcacacttgca 3409660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 3415534 - 3415466
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||| ||| |||||||||||  ||||||||||||||||  | |||  ||||||||||||||||||||    
T  3415534 tttatgggtcctcttacttatatggtgttcaacctttactattttatgtgatgtgggacatataactca 3415466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 5958685 - 5958769
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||  ||||| |||||| ||||||||||||||||  | ||||||||||   |||||||||||| | |||||||| ||||    
T  5958685 tttatgagttctcttatttataaggtgttcaacctttactgttttatccgatgtaacacatataactcacaattgcacaccacaa 5958769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 112
Target Start/End: Original strand, 7588355 - 7588390
Alignment:
Q  77 gatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||||||||||| |||||||||||||||    
T  7588355 gatgtgggacatataactcacacttgcacacaacaa 7588390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 2579585 - 2579642
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||||||||| || | | |||||||||| | | |||||||||||||||||||||||    
T  2579585 tcttacttataaggtatccgacctttacttttttgtccgatgtgggacatataactca 2579642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 2578928 - 2578999
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||| |||||| || |||||| ||||||| | ||||||||| ||||||||||| ||| |||||| |||||||    
T  2578928 tcttatttataaggtattcaacatttactttt-tatccgatgagggacatataaatcacacttgctcacaaca 2578999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 7e-24; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 2740765 - 2740693
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||    
T  2740765 tcttacttataaggtgttcaacctttactgttctatccgatgtgggacatataactcacacttgcacacaaca 2740693  T

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Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 3244531 - 3244614
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| ||||||||||||  |||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  3244531 tttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgagacatataactcacacttgcacacaaca 3244614  T

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Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 52884763 - 52884688
Alignment:
Q  36 tcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||    
T  52884763 tcatcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 52884688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 52884952 - 52884879
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||||||||||    
T  52884952 tcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaa 52884879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 54741260 - 54741341
Alignment:
Q  30 tatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||| ||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||    
T  54741260 tatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataattcacacttgcacacaaca 54741341  T

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Target: chr4; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 3341203 - 3341120
Alignment:
Q  29 ttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||| ||| |||||||||||||||||| ||||||||||  | ||||| ||||||||||||||||||| |||||||||||||||    
T  3341203 ttatgggtcctcttacttataaagtgtttaacctttactcttttatccaatgtgggacatataactcacacttgcacacaacaa 3341120  T

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Target: chr4; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 36629313 - 36629230
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| |||||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  36629313 tttatgggtcctcttacttataaggtgtttaacttttacttttctatccgatgtgggacatataactcacacttgaacacaaca 36629230  T

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Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 16888907 - 16888981
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttg-cacacaacaa 112  Q
    |||||||||||| || |||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||    
T  16888907 tcttacttataaggtattcaacctttacttttctatccgatgtgggacatataactcacacttgccacacaacaa 16888981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 44620736 - 44620654
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaac 110  Q
    |||||| ||| |||||||||||||||||||||||| ||||  |  |||||||||||||||||||||||| |||||||||||||    
T  44620736 tttatgggtcctcttacttataaagtgttcaacctctactatttcatccgatgtgggacatataactcacacttgcacacaac 44620654  T

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Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 10245985 - 10245912
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | ||||||||||||| ||||||||||| |||||||||||||||    
T  10245985 tcttacttataaggtgttcaacctttactcttttatccgatgtggggcatataactcacacttgcacacaacaa 10245912  T

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Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 28034315 - 28034222
Alignment:
Q  18 aagcaataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||||| |||||| ||  ||| ||||||||||||||||||||  |||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  28034315 aagcaataagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgcgggacatataattcacacttgcacacaaca 28034222  T

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Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 50002503 - 50002418
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||| ||| ||||||||| |||||||||||||||||||  | ||||||||||| ||||||||||||| ||||||| |||||||    
T  50002503 atttatgggtcctcttacttaaaaagtgttcaacctttactcttttatccgatgtgagacatataactcacacttgcaaacaacaa 50002418  T

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Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 4955397 - 4955481
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| |||||||||||| |||||||||||| |||  | |||||||| || ||||||||||||| |||||||||||||||    
T  4955397 tttatgagtcctcttacttataaggtgttcaaccttaactattttatccgatatgagacatataactcacacttgcacacaacaa 4955481  T

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Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 34646729 - 34646813
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| ||||| |||||| ||||||||| ||||||  | ||||||||||||||||||||||||| ||||| |||||||||    
T  34646729 tttatgagtcctcttagttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgtacacaacaa 34646813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 2741146 - 2741064
Alignment:
Q  29 ttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||| ||| |||||||||||| || |||||||||||||  |||||| |||||||||||||||||||| ||||||||| ||||    
T  2741146 ttatgggtcctcttacttataaggtattcaacctttactattctatctgatgtgggacatataactcacacttgcacataaca 2741064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 3700438 - 3700356
Alignment:
Q  31 atgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    ||||||| | |||||||||| ||||||||| ||||||  | |||||||||| |||||||||||||| ||||||||||||||||    
T  3700438 atgagtccttttacttataaggtgttcaacatttactcttttatccgatgtaggacatataactcacacttgcacacaacaat 3700356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 16889616 - 16889701
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttg-cacacaacaa 112  Q
    ||||||| || |||||||||||| || |||||||||||||| |||||||||| || ||||||||||||| ||||| ||||||||||    
T  16889616 tttatgaatcctcttacttataaggtattcaacctttacttttctatccgatttgagacatataactcacacttgccacacaacaa 16889701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 25483401 - 25483328
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||||||  |||||||||||||||  | ||||||||||| ||||||||||||| |||||||||||||||    
T  25483401 tcttacttataagatgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaa 25483328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 36572096 - 36572011
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||| ||| |||||||||||| ||||||||| ||||||  | ||| ||||||||||||||||||||| ||||| |||||||||    
T  36572096 atttatgggtcttcttacttataaggtgttcaacatttactcttttattcgatgtgggacatataactcacacttgtacacaacaa 36572011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 39404094 - 39404013
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||||||| |||||||||||||||||||||||||||||  | ||| | |||| |||||||||||||| ||||| ||||||    
T  39404094 tttatgagtcctcttacttataaagtgttcaacctttactcttttattcaatgtaggacatataactcacacttgtacacaa 39404013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 44620361 - 44620288
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | ||||| ||||||||||||||||||||| ||| |||||||||    
T  44620361 tcttacttataaggtgttcaacctttactattttatcccatgtgggacatataactcatatttgtacacaacaa 44620288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 49076539 - 49076612
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | |||||||| ||| |||||||||||| |||||||||||||||    
T  49076539 tcttacttataaggtgttcaacctttactgttttatccgatatggtacatataactcacacttgcacacaacaa 49076612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 22028041 - 22028125
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| |||||||||||||  |  | ||||||||||||||||||||| ||| |||||||||||||||    
T  22028041 tttatgggtcctcttacttataaggtgttcaacctttcgtattttatccgatgtgggacatataagtcacacttgcacacaacaa 22028125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 22183344 - 22183428
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| | ||||||||||| |||||||| ||||||  | |||||||||||||| |||||||||| |||||||||||||||    
T  22183344 tttatgggtccttttacttataaattgttcaacatttactcttttatccgatgtgggatatataactcacacttgcacacaacaa 22183428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 39404474 - 39404390
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| |||||| |||||||||  | |||| |||||||||||||||||||| ||||| |||||||||    
T  39404474 tttatgggtcctcttacttataaggtgttccacctttactcttttatctgatgtgggacatataactcacacttgtacacaacaa 39404390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 39792951 - 39793023
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||| ||||||| ||||||||| ||||||| |||||| |||||||||||||||||||| ||||| ||||||||    
T  39792951 tctttcttataaggtgttcaacatttacttttctatctgatgtgggacatataactcacacttgtacacaaca 39793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 41707557 - 41707629
Alignment:
Q  41 ttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    |||||||||  ||||||||||||||||  | ||||||||||||||||||||||||| ||||| ||||||||||    
T  41707557 ttacttatatggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaat 41707629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 4390192 - 4390265
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | |||| ||||||||| || ||||||| |||||||||||||||    
T  4390192 tcttacttataaggtgttcaacctttactcttttatctgatgtgggatatgtaactcacacttgcacacaacaa 4390265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 36608752 - 36608825
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| | ||||||||| ||||||  | |||||||||| |||||||||||||| |||||||||||||||    
T  36608752 tcttacttatgaggtgttcaacttttactcttttatccgatgttggacatataactcacacttgcacacaacaa 36608825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 1731727 - 1731811
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| ||||| ||||||  |||||||||||||||  | |||| |||||||||||||||||||| | |||||||||||||    
T  1731727 tttatgggtcctcttatttataagatgttcaacctttactgttttatctgatgtgggacatataactcacatttgcacacaacaa 1731811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 49880236 - 49880160
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||| | ||||||||||||||||||| |||||||    
T  49880236 tttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtgggacatataactcacacttgca 49880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 50630835 - 50630903
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | |||||||||| ||||||||||||||    
T  50630835 tttatgggtcctcttacttataatgtgttcaacctttactattttatccgatgtaggacatataactca 50630903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 54108989 - 54108908
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | |||||||||||||||  |||||| | ||||||||||||||    
T  54108989 tttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggac--ataactgacacttgcacacaaca 54108908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 55933204 - 55933280
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| |||||||||| |||||  | |||||||||| |||||||||||||| |||||||    
T  55933204 tttatgggtcctcttacttataaggtgttcaacccttactattttatccgatgtaggacatataactcacacttgca 55933280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 32941203 - 32941286
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||| | ||||| |||||| ||||||||||||||||  ||| ||||||||  ||||||||||||| ||||||| ||||||    
T  32941203 tttatgagccctcttatttataaggtgttcaacctttactgttctttccgatgtaagacatataactcacacttgcagacaaca 32941286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 44621491 - 44621420
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaac 110  Q
    |||||||||||| ||||| ||||||||||  | ||||| |||| |||||||||||||| |||||||||||||    
T  44621491 tcttacttataaggtgtttaacctttactgttttatcccatgttggacatataactcacacttgcacacaac 44621420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 54017675 - 54017754
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacac 107  Q
    |||||| ||| ||||||||||||  |||||||||||||||  | |||| || ||||||||||||||||| ||||||||||    
T  54017675 tttatgggtcctcttacttataagatgttcaacctttactattttatctgacgtgggacatataactcacacttgcacac 54017754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 54343092 - 54343147
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataact 94  Q
    |||||||||||| ||||||||||||||||  | |||||||||||||||||||||||    
T  54343092 tcttacttataaggtgttcaacctttactattttatccgatgtgggacatataact 54343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 3340883 - 3340802
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||| ||| |||||||||||| ||| ||||||||||||  |  ||| |||| ||||||||||||||| ||||||||||||    
T  3340883 tttatgggtcctcttacttataaggtgctcaacctttactctttcatctgatgcgggacatataactcacacttgcacacaa 3340802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 20826282 - 20826225
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||||||||| ||||||||| ||||||  | |||||||||||||||||||||||||    
T  20826282 tcttacttataacgtgttcaacttttactattttatccgatgtgggacatataactca 20826225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 43174583 - 43174498
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttact-tctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| |||||||||||||||| | | |||| |||||| | ||||||||||| ||||| |||||||||    
T  43174583 tttatgtgtcctcttacttataaggtgttcaacctttactctttttatctgatgtgtggcatataactcacacttgtacacaacaa 43174498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 45489422 - 45489495
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||  ||||||||||||||||  | ||||||||||| ||||||||| ||| ||||| |||||||||    
T  45489422 tcttacttatatggtgttcaacctttactcttttatccgatgtgagacatataattcacacttgtacacaacaa 45489495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 50459797 - 50459724
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatactt 101  Q
    |||||||||| ||||||||||||  |||||||||||||||  | || ||||||||| |||||||||||| ||||    
T  50459797 tttatgagtcctcttacttataagatgttcaacctttactcttttaaccgatgtggaacatataactcacactt 50459724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 112
Target Start/End: Original strand, 54017784 - 54017868
Alignment:
Q  30 tatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtggg--acatataactcatacttgcacacaacaa 112  Q
    |||| ||| |||||||||||| ||||||||||||||||  | |||||||||||||  | |||||||||| | |||||||||||||    
T  54017784 tatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggatatatataactcacatttgcacacaacaa 54017868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 12197438 - 12197370
Alignment:
Q  44 cttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| || |||||| |||| |||||  |||||||||| ||||||||| |||||||||||||||    
T  12197438 cttataaagtattgaaccttcacttttctatttgatgtgggacctataactcacacttgcacacaacaa 12197370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 19504757 - 19504697
Alignment:
Q  52 gtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||| ||||||  | |||||||| |||||||||||||||||||||| |||||||||    
T  19504757 gtgttcaacttttactattttatccgatatgggacatataactcatacttgtacacaacaa 19504697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 20825901 - 20825829
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||| |||||| ||||||||||||||||  | |||||||||||| |||||||||||| | ||| ||||||||    
T  20825901 tcttatttataaggtgttcaacctttactcttttatccgatgtggaacatataactcacatttgtacacaaca 20825829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 41370433 - 41370357
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| || |||||| ||||||  | |||||||| |||||||||||||||| |||||||    
T  41370433 tttatgggtcctcttacttataaggttttcaacatttactattttatccgatttgggacatataactcacacttgca 41370357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 51768140 - 51768224
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| ||||| |||||| ||||||||| ||||||  | ||| |||| | |||||||||||||| | |||||||||||||    
T  51768140 tttatgagtcctcttatttataaggtgttcaacatttactcttatattcgatataggacatataactcacatttgcacacaacaa 51768224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 34004646 - 34004744
Alignment:
Q  10 aaaaccctaagcaataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||| |||| ||| | |||||| ||| ||||||||||||  ||||||||||||| || | ||||  ||||| ||||||||||||| ||||||||||||    
T  34004646 aaaaccttaaggaatgagtttatgggtcctcttacttataagttgttcaacctttagtt-tttatcatatgtgtgacatataactcacacttgcacacaa 34004744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 6975535 - 6975604
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    ||||||||||| ||||||||||||  | |||||||||||||  | |||| |||||| |||||||||||||    
T  6975535 atttatgagtcctcttacttataagatattcaacctttactattttatcggatgtgagacatataactca 6975604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 50788086 - 50788139
Alignment:
Q  51 agtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||||||||||||||  | ||||||||||||||||||||||| | |||||||    
T  50788086 agtgttcaacctttactattttatccgatgtgggacatataacttacacttgca 50788139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 760265 - 760197
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||| ||| ||| |||||||||||  |||||||| | || ||||| |||||||||||||||||||||    
T  760265 tttatgggtcctctcacttataaagttctcaaccttcatttttctattcgatgtgggacatataactca 760197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 44620418 - 44620362
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactc 95  Q
    ||||| |||||| ||||||||||||||||  | |||||||||||| |||||||||||    
T  44620418 tcttatttataaggtgttcaacctttactgttttatccgatgtggaacatataactc 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 44621067 - 44621011
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactc 95  Q
    |||||||||||| ||||||||||||||||  | ||||||||||||| |||| |||||    
T  44621067 tcttacttataaggtgttcaacctttactgttttatccgatgtgggtcatacaactc 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 10246423 - 10246340
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| ||| ||||||||  |||||||||||||||  | |||||||| || ||||||||||  | ||||||||||||||    
T  10246423 tttatgggtcctctaacttataagatgttcaacctttactcttttatccgatttgagacatataacagacacttgcacacaaca 10246340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 22028449 - 22028535
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctct--atccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| ||||||| |||| |||||||||||||| || | |  ||||||||| |||||||||| | | |||||||||||||||    
T  22028449 tttatgggtcctcttactaataaggtgttcaacctttatttttttttatccgatgtaggacatataagtaacacttgcacacaacaa 22028535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 44621010 - 44620936
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatg-tgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| |||||||||||||||   | ||||||||| |||||||| ||||||| |||||  ||||||||    
T  44621010 tcttacttataaggtgttcaacctttacagttttatccgatgttgggacatctaactcacacttgtccacaacaa 44620936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 45496870 - 45496820
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacata 89  Q
    |||||||||||| |||||||||||||||   | ||||||||||||||||||    
T  45496870 tcttacttataaggtgttcaacctttacgattttatccgatgtgggacata 45496820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 11348423 - 11348492
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||||||||||||||  |||  | |||| ||||| | |||||||||||| | |||||||||||||    
T  11348423 acttataaagtgttcaacctccactattttatctgatgtagaacatataactcacaattgcacacaacaa 11348492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 11706636 - 11706685
Alignment:
Q  63 ttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| | |||||||||||||||||| ||||||  ||||||||||||||    
T  11706636 ttacttttttatccgatgtgggacatacaactcacccttgcacacaacaa 11706685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 45050649 - 45050592
Alignment:
Q  56 tcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    ||||||||||||  | |||  |||||| ||||||||||||| ||||||||||||||||    
T  45050649 tcaacctttactcttttatttgatgtgagacatataactcacacttgcacacaacaat 45050592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 49302955 - 49302902
Alignment:
Q  53 tgttcaacctttacttctctatccgatgtgggacatataactcatacttgcaca 106  Q
    |||||||||||||||| | |||  |||||||||||||||||||| |||| ||||    
T  49302955 tgttcaacctttacttttttatttgatgtgggacatataactcacacttacaca 49302902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 49076928 - 49076992
Alignment:
Q  46 tataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaac 110  Q
    ||||| ||||||||||||||||  | || || || ||| |||||||||||| |||||||||||||    
T  49076928 tataaggtgttcaacctttactattttagccaatatggaacatataactcacacttgcacacaac 49076992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 7e-24; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 28531407 - 28531479
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  28531407 tcttacttataaggtgttcaacctttgcttttctatccgatgtgggacatataactcacacttgcacacaaca 28531479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 962674 - 962591
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| ||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||    
T  962674 tttatgggtcctctcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcatacaaca 962591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 6421461 - 6421377
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||  ||||||||    
T  6421461 tttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtgcacaacaa 6421377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 28254319 - 28254403
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| ||||||||||||  |||||||||||||||| ||||||||||||||||||||||| ||| ||| |||||||||||    
T  28254319 tttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgggacatataagtcacactggcacacaacaa 28254403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 42514725 - 42514642
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| |||||||||||| ||||||||||||||||| |||||| ||||| |||||||||||||| ||||||| ||||||    
T  42514725 tttatgggtcctcttacttataaggtgttcaacctttacttttctatctgatgtaggacatataactcacacttgcatacaaca 42514642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 7598684 - 7598606
Alignment:
Q  29 ttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacac 107  Q
    ||||| ||| |||||||||||| ||||||||||||||||| | |||| |||||||||||||||||||| ||||||||||    
T  7598684 ttatgggtcctcttacttataaggtgttcaacctttacttttttatctgatgtgggacatataactcacacttgcacac 7598606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 40163462 - 40163520
Alignment:
Q  35 gtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataac 93  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  40163462 gtcatcttacttataaggtgttcaacctttacttttctatccgatgtgggacatataac 40163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 38796311 - 38796384
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||| ||||||  | ||||||||||||||||||||||||| |||||||||||||||    
T  38796311 tcttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaacaa 38796384  T

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Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 15880339 - 15880255
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | |||||||||||| |||||||||||| ||||| |||||||||    
T  15880339 tttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactcacacttgtacacaacaa 15880255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 16542525 - 16542441
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||| |||| ||||| |||||| ||||||||||||||||  | ||||||||||||||| ||||||||| |||||||||||||||    
T  16542525 tttataagtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacttataactcacacttgcacacaacaa 16542441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 28254194 - 28254254
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacat 88  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  28254194 tttatgagtcctcttacttataaagtgttcaacctttacttttctatccgatgtgagacat 28254254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 36005962 - 36006045
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||| ||||||| ||||| ||||||||||||||||||||| ||||| |||||||||    
T  36005962 tttatgggtcctcttacttataaggtgttcaacttttactt-tctattcgatgtgggacatataactcacacttgtacacaacaa 36006045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 36178687 - 36178763
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  36178687 tttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 36178763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 37106264 - 37106188
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  37106264 tttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 37106188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 38796702 - 38796786
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| |||||||||||||| |  | |||| |||||||||||||||||||| |||||||||||||||    
T  38796702 tttatgggtcctcttacttataaggtgttcaacctttattgttttatcagatgtgggacatataactcacacttgcacacaacaa 38796786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 40679722 - 40679794
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||||||| |||||||||| |||||| |||||||||| |||||||||||||||| | ||||||||||||    
T  40679722 tcttacttataaggtgttcaacccttacttttctatccgatatgggacatataactcacatttgcacacaaca 40679794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 1769968 - 1769889
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacac 107  Q
    |||||||||| |||||||||||| ||||||||| ||||||  | ||||||||||| ||||||||||||| ||||||||||    
T  1769968 tttatgagtcctcttacttataaggtgttcaacttttactcttttatccgatgtgtgacatataactcacacttgcacac 1769889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 36785664 - 36785729
Alignment:
Q  47 ataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||||||||||    
T  36785664 ataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaa 36785729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 40733593 - 40733512
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||| ||| |||||||||||| ||||||||| ||||||| | |||| |||||||||||||||||||| ||||| ||||||    
T  40733593 tttatgggtcctcttacttataaggtgttcaacatttacttttttatctgatgtgggacatataactcacacttgtacacaa 40733512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 14745749 - 14745825
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||| ||||||||||||||||||| |||||||    
T  14745749 tttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactcacacttgca 14745825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 31899508 - 31899592
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||| ||||||  | |||||||||||| |||||||||||| |||| ||||||||||    
T  31899508 tttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacactttcacacaacaa 31899592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 41283557 - 41283633
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | |||||||| |||||||||||||||| |||||||    
T  41283557 tttatgggtcctcttacttataaggtgttcaacctttactattttatccgatatgggacatataactcacacttgca 41283633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 12910324 - 12910221
Alignment:
Q  9 caaaaccctaag-caataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacac 107  Q
    ||||||| |||| |||| ||||||| |||||| | |||||||| | ||||||||| ||||| || ||||||||||| |||||||||||| |||| |||||    
T  12910324 caaaaccttaagacaatgaatttataagtcatttcacttataaggggttcaacctgtacttttccatccgatgtggaacatataactcaaacttacacac 12910225  T
Q  108 aaca 111  Q
    ||||    
T  12910224 aaca 12910221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 33561533 - 33561616
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| ||| |||||||||||||| |||||  |||| |||||| ||||||| |||||||||||| ||||||||||||||    
T  33561533 tttatgggtcctctcacttataaagtgtttaacctccacttttctatctgatgtggaacatataactcacacttgcacacaaca 33561616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 37632679 - 37632762
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| ||||||||||||| |||  ||||||||||  | |||||||||| |||||||||||||| ||||||||||||||    
T  37632679 tttatgggtcctcttacttataaaatgtcaaacctttactattttatccgatgtaggacatataactcacacttgcacacaaca 37632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 6713062 - 6712968
Alignment:
Q  18 aagcaataaatttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||  |||||| ||| |||||||||||| ||||||||| ||||||  | ||||||||||| ||||||||||||| ||||| | |||||||    
T  6713062 aagcaataggtttatgggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgagacatataactcacacttgtatacaacaa 6712968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 37894773 - 37894855
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    ||||||||||| |||||||||||| || || | ||||||||| ||||| | ||||||||||||||||||| | ||||||||||    
T  37894773 atttatgagtcttcttacttataaggtttttagcctttacttttctattcaatgtgggacatataactcacatttgcacacaa 37894855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 5543091 - 5543156
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||||||||| ||||||||||||||||  | |||| |||||||||||||||||||| |||||||    
T  5543091 tcttacttataaggtgttcaacctttactattttatcggatgtgggacatataactcacacttgca 5543156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 15511577 - 15511659
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | |||||| |||| ||||||||||||  |||||||||||||||    
T  15511577 tttatgggtcctcttacttataacgtgttcaacctttactcttttatccgttgtgtgacatataactc--acttgcacacaacaa 15511659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 31468855 - 31468912
Alignment:
Q  55 ttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||||  | ||||||||||||||||||||||||| |||||||||||||||    
T  31468855 ttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaa 31468912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 5542707 - 5542783
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||| |||| |||||||||||||||| |||||||    
T  5542707 tttatgggtcctcttacttataaggtgttcaacctttactattttattcgatatgggacatataactcacacttgca 5542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 9231314 - 9231242
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||| ||||||  |||||||||||||||| |||||| ||| || |||||||||||||||||| |||||||||    
T  9231314 tcttatttataatatgttcaacctttacttttctatctgatatgagacatataactcatacttacacacaaca 9231242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 33954342 - 33954426
Alignment:
Q  27 atttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||||||||| | | ||||| | |||| |||||  |||| |||||| |||||||||||||||||||| ||||||||||||||    
T  33954342 atttatgagtcatttaagttatataatgtttaacctcaacttttctatctgatgtgggacatataactcacacttgcacacaaca 33954426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 36178351 - 36178427
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    ||||||||||  ||||||||||| |||||| |||||||||  | ||||||| ||||||||||||||||| |||||||    
T  36178351 tttatgagtccccttacttataaggtgttccacctttactattttatccgaagtgggacatataactcacacttgca 36178427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 37105988 - 37105924
Alignment:
Q  40 cttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    ||||||||||| ||||||||||||||||  | ||| ||||||||||||||||||||| |||||||    
T  37105988 cttacttataaggtgttcaacctttactattttattcgatgtgggacatataactcacacttgca 37105924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 33953853 - 33953936
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||| ||| ||| ||||||| ||||||||||||  |||| |||||| |||||||||| ||||||||| | ||||||||||||    
T  33953853 tttatgggtcctctcacttatatagtgttcaacctccacttttctatctgatgtgggacttataactcacatttgcacacaaca 33953936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 37895156 - 37895227
Alignment:
Q  41 ttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| || |||||| |||| || ||||||||||||||||||||||||||| ||| |||||||||||    
T  37895156 ttacttttaaggttttcaacttttatttttctatccgatgtgggacatataactcaaactcgcacacaacaa 37895227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 29676961 - 29676895
Alignment:
Q  46 tataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||| ||||| ||||||||||  | ||||||||||||||||||||||||| || ||||||||||||    
T  29676961 tataaggtgttaaacctttactcttttatccgatgtgggacatataactcacacctgcacacaacaa 29676895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 35580820 - 35580886
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    |||||||| ||||||||| |||| |  | ||||||||||||||||||||||||| ||||||||||||    
T  35580820 acttataaggtgttcaacatttattgttttatccgatgtgggacatataactcacacttgcacacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 29873619 - 29873704
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    |||||||||| ||  ||||||||| ||||||||||  |||| |||||| |||||||||||| |||| ||  |||||||||||||||    
T  29873619 tttatgagtcctcccacttataaaatgttcaacctccacttttctatctgatgtgggacatgtaacacacccttgcacacaacaat 29873704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 3672747 - 3672711
Alignment:
Q  76 cgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||||||||||||||||||||||||||||    
T  3672747 cgatgtgggacatataactcatacttgcacacaacaa 3672711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 12529110 - 12529194
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| |||||||||||  |||||||| |||||||  | |||  ||||| |||||||||||||| ||||||| |||||||    
T  12529110 tttatgagtcctcttacttatacggtgttcaatctttactgttttatttgatgtaggacatataactcacacttgcatacaacaa 12529194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 40733958 - 40733878
Alignment:
Q  29 ttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaa 109  Q
    ||||||| | |||||||||||| ||||| || |||||||  | ||| ||||||||||||||||||||| ||||| ||||||    
T  40733958 ttatgagccctcttacttataaggtgttaaatctttactcttttattcgatgtgggacatataactcacacttgtacacaa 40733878  T

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Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 42515078 - 42515005
Alignment:
Q  42 tacttataaagtgttcaacctttacttctctatccgatgtggga----catataactcatacttgcacacaaca 111  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||    ||||||||||| || |||||||||||    
T  42515078 tacttataaggtgtttaacctttacttttctatccgatgtgggacatacatataactcacacctgcacacaaca 42515005  T

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Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 5367523 - 5367448
Alignment:
Q  36 tcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaaca 111  Q
    ||||||||||||||| ||||||||||||| ||  | |||||||| |||||||||||  ||| ||||| ||||||||    
T  5367523 tcatcttacttataaggtgttcaacctttgctcttttatccgatctgggacatatatatcacacttgtacacaaca 5367448  T

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Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 7598304 - 7598225
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacac 107  Q
    |||||| ||| ||||| |||||| ||||| ||||||||||| ||||| |||||| | |||||||| ||| ||||||||||    
T  7598304 tttatgggtcctcttatttataaggtgttgaacctttacttttctattcgatgtagaacatataattcacacttgcacac 7598225  T

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Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 29874122 - 29874185
Alignment:
Q  45 ttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacaca 108  Q
    ||||||||||||||||||  |||| |||||| ||||||||||||||||| || ||||| |||||    
T  29874122 ttataaagtgttcaacctccacttttctatctgatgtgggacatataacacacacttgtacaca 29874185  T

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Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 30313232 - 30313169
Alignment:
Q  50 aagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    |||||||||||||  |||| ||||||||||||| |||||||||| ||  |||||||||||||||    
T  30313232 aagtgttcaacctccacttttctatccgatgtgagacatataacacacgcttgcacacaacaat 30313169  T

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Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 30323525 - 30323455
Alignment:
Q  43 acttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    |||| |||||||||||||||  | || |||||| ||| ||||||||||||| || ||||||||||||||||    
T  30323525 acttctaaagtgttcaacctccaattttctatctgatttgggacatataacacacacttgcacacaacaat 30323455  T

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Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 31259698 - 31259785
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatcc---gatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| |||||||||||||||| ||||| ||||||||||  | |||||   |||||| ||||||||||||  |||| ||||||||||    
T  31259698 tttatgggtcatcttacttataaggtgttgaacctttactcttttatccgatgatgtgagacatataactcgcacttacacacaacaa 31259785  T

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Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 3673117 - 3673077
Alignment:
Q  72 tatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  3673117 tatccaatgtgggacatataactcacacttgcacacaacaa 3673077  T

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Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 6421352 - 6421296
Alignment:
Q  56 tcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    ||||||||||||  | ||||||||||||||||||||||| | ||||| |||||||||    
T  6421352 tcaacctttactcttttatccgatgtgggacatataacttacacttgtacacaacaa 6421296  T

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Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 6422186 - 6422126
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacat 88  Q
    |||||| ||| ||||| |||||| ||||||||||||||||| | |||| ||||||||||||    
T  6422186 tttatgggtcctcttaattataatgtgttcaacctttacttttttatctgatgtgggacat 6422126  T

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Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 16590940 - 16590881
Alignment:
Q  53 tgttcaacctttacttctct-atccgatgtgggacatataactcatacttgcacacaaca 111  Q
    |||||||||||||||| | | ||  |||||||||||||||||||| ||||||||||||||    
T  16590940 tgttcaacctttactttttttatttgatgtgggacatataactcacacttgcacacaaca 16590881  T

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Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 113
Target Start/End: Original strand, 43443106 - 43443149
Alignment:
Q  70 tctatccgatgtgggacatataactcatacttgcacacaacaat 113  Q
    |||||| |||||||||||||||||| | ||||||||||||||||    
T  43443106 tctatctgatgtgggacatataacttacacttgcacacaacaat 43443149  T

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Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 36178265 - 36178311
Alignment:
Q  40 cttacttataaagtgttcaacctttacttctctatccgatgtgggac 86  Q
    ||||||||||| ||||||||||||||||  | |||||||||||||||    
T  36178265 cttacttataaggtgttcaacctttactattttatccgatgtgggac 36178311  T

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Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 41678449 - 41678534
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggac--atataactcatacttgcacacaaca 111  Q
    |||||| ||| ||| |||||||||||||| |||||   ||| |||||| |||||| |||  |||||||||| ||||||||||||||    
T  41678449 tttatgggtcctctcacttataaagtgtttaacctccccttttctatctgatgtgagacatatataactcacacttgcacacaaca 41678534  T

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Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 23346296 - 23346228
Alignment:
Q  45 ttataaagtgttcaacctttacttctctatccgatgtgggac--atataactcatacttgcacacaaca 111  Q
    |||||| ||||| ||||||||||| ||||| ||||||| |||  |||||||||| ||| ||||||||||    
T  23346296 ttataaggtgtttaacctttacttttctatacgatgtgagacatatataactcacactcgcacacaaca 23346228  T

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Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 33731713 - 33731656
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactca 96  Q
    |||||||||||| ||| ||||||||||||  | ||||||||||| || ||||||||||    
T  33731713 tcttacttataaggtgctcaacctttactcttttatccgatgtgagatatataactca 33731656  T

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Target: scaffold0734 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 5853 - 5769
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | ||||||||||| ||||||||||||| |||||||||||||||    
T  5853 tttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgcgacatataactcacacttgcacacaacaa 5769  T

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Target: scaffold0734; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 5461 - 5388
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||| ||||||||||||||||  | |||||||||| |||||||||||||| |||||||||||||||    
T  5461 tcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactcacacttgcacacaacaa 5388  T

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Target: scaffold0702 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 235 - 300
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgca 104  Q
    |||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  235 tcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 300  T

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Target: scaffold0702; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 596 - 680
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||  | || |||||||||||||||||||||| |||||  ||||||||    
T  596 tttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactcacacttgtgcacaacaa 680  T

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Target: scaffold0391 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 1188 - 1272
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||| | || ||||||| ||||||||||||||||  | ||||| ||||||||||||||||||| ||||| |||||||||    
T  1188 tttatgagtcctttttcttataaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgtacacaacaa 1272  T

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Target: scaffold0391; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 3092 - 3151
Alignment:
Q  53 tgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||||||||||||  | ||||||||||||||||||||||||| || ||||||||||||    
T  3092 tgttcaacctttactcttttatccgatgtgggacatataactcacacctgcacacaacaa 3151  T

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Target: scaffold0171 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 17538 - 17622
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| ||||||||| || ||||||||||||||||  | |||| |||||| ||||||||||||| |||||||||||||||    
T  17538 tttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgtgacatataactcacacttgcacacaacaa 17622  T

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Target: scaffold0113 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 39906 - 39827
Alignment:
Q  36 tcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaattc 115  Q
    |||||| |||||||||| || |||||   |||| ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  39906 tcatctcacttataaagagtccaaccaccacttttctatccgatgtgggacatataactcacacttgaacacaacaattc 39827  T

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Target: scaffold0504 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 10193 - 10277
Alignment:
Q  28 tttatgagtcatcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacacaacaa 112  Q
    |||||| ||| |||||||||||| ||||||||| |||||   | ||||||||||| ||||||||||||| |||||  ||||||||    
T  10193 tttatgggtcctcttacttataaggtgttcaacttttaccattttatccgatgtgagacatataactcacacttgtgcacaacaa 10277  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 47425 - 47356
Alignment:
Q  39 tcttacttataaagtgttcaacctttacttctctatccgatgtgggacatataactcatacttgcacaca 108  Q
    |||||||||||| |||||||| |||||||  | |||| |||||| ||||| ||| ||| |||||||||||    
T  47425 tcttacttataaggtgttcaaactttactattttatcggatgtgagacatttaattcacacttgcacaca 47356  T

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