View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13764_high_6 (Length: 597)

Name: NF13764_high_6
Description: NF13764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13764_high_6
NF13764_high_6
[»] chr8 (25 HSPs)
chr8 (3-513)||(18733769-18734284)
chr8 (46-292)||(18726365-18726616)
chr8 (470-581)||(18726242-18726352)
chr8 (316-367)||(35580365-35580416)
chr8 (323-368)||(9072623-9072668)
chr8 (323-368)||(29777135-29777180)
chr8 (315-368)||(42448153-42448206)
chr8 (315-367)||(44577943-44577995)
chr8 (4-39)||(18726969-18727004)
chr8 (316-368)||(9619484-9619536)
chr8 (316-368)||(14907050-14907102)
chr8 (316-368)||(16794199-16794251)
chr8 (316-366)||(2655777-2655827)
chr8 (316-370)||(24853564-24853618)
chr8 (323-357)||(28239750-28239784)
chr8 (323-368)||(17949153-17949198)
chr8 (323-368)||(27747245-27747290)
chr8 (316-368)||(37566005-37566058)
chr8 (316-368)||(9498728-9498780)
chr8 (553-581)||(18733720-18733748)
chr8 (316-368)||(19876118-19876170)
chr8 (316-368)||(32724615-32724666)
chr8 (316-379)||(39153271-39153335)
chr8 (316-368)||(43890251-43890303)
chr8 (323-367)||(44100065-44100109)
[»] chr7 (29 HSPs)
chr7 (414-509)||(1098724-1098820)
chr7 (109-214)||(1100687-1100794)
chr7 (209-292)||(1097625-1097709)
chr7 (323-470)||(1575209-1575370)
chr7 (134-211)||(1575020-1575100)
chr7 (316-357)||(26492275-26492316)
chr7 (316-368)||(20116482-20116534)
chr7 (4-73)||(1097245-1097310)
chr7 (329-380)||(1100904-1100955)
chr7 (316-367)||(35667357-35667408)
chr7 (316-357)||(31235918-31235959)
chr7 (323-367)||(1485389-1485433)
chr7 (316-368)||(23425497-23425549)
chr7 (316-368)||(26583613-26583665)
chr7 (316-368)||(45199157-45199209)
chr7 (316-368)||(46821913-46821965)
chr7 (1-36)||(1572420-1572455)
chr7 (319-357)||(23085431-23085469)
chr7 (316-357)||(2843353-2843394)
chr7 (316-357)||(21266302-21266343)
chr7 (323-368)||(22928003-22928048)
chr7 (316-357)||(32684595-32684636)
chr7 (316-357)||(35496301-35496342)
chr7 (320-357)||(42408272-42408309)
chr7 (316-357)||(46338963-46339004)
chr7 (323-355)||(433825-433857)
chr7 (316-356)||(1448955-1448995)
chr7 (316-368)||(6001920-6001972)
chr7 (316-368)||(48207801-48207853)
[»] scaffold0491 (1 HSPs)
scaffold0491 (414-512)||(12086-12184)
[»] chr4 (28 HSPs)
chr4 (316-368)||(21090064-21090116)
chr4 (316-368)||(51317897-51317949)
chr4 (316-367)||(38706836-38706887)
chr4 (323-368)||(10389886-10389931)
chr4 (316-368)||(2115714-2115766)
chr4 (305-357)||(4643780-4643832)
chr4 (316-368)||(5333585-5333637)
chr4 (316-368)||(37188718-37188770)
chr4 (316-358)||(8009485-8009527)
chr4 (316-357)||(5333657-5333698)
chr4 (323-368)||(34024569-34024614)
chr4 (316-377)||(43444295-43444356)
chr4 (316-368)||(1008206-1008258)
chr4 (316-368)||(47416795-47416847)
chr4 (323-358)||(32952879-32952914)
chr4 (316-366)||(18139039-18139089)
chr4 (316-375)||(29289236-29289296)
chr4 (316-354)||(31381797-31381835)
chr4 (316-366)||(49126252-49126302)
chr4 (323-357)||(56194521-56194555)
chr4 (316-353)||(14183729-14183766)
chr4 (316-357)||(35965101-35965142)
chr4 (316-357)||(50766635-50766676)
chr4 (332-368)||(868068-868104)
chr4 (316-368)||(9529004-9529056)
chr4 (316-356)||(10359672-10359712)
chr4 (316-368)||(12265366-12265418)
chr4 (316-368)||(43154147-43154198)
[»] chr3 (18 HSPs)
chr3 (316-368)||(22802918-22802970)
chr3 (305-368)||(25162333-25162396)
chr3 (316-368)||(36906018-36906070)
chr3 (316-368)||(38440703-38440755)
chr3 (316-368)||(42719417-42719469)
chr3 (316-367)||(4178462-4178513)
chr3 (316-357)||(2342399-2342440)
chr3 (323-368)||(3850588-3850633)
chr3 (316-357)||(4172474-4172515)
chr3 (316-368)||(29503359-29503411)
chr3 (316-368)||(46934539-46934591)
chr3 (316-367)||(17237700-17237751)
chr3 (316-367)||(38855163-38855214)
chr3 (316-367)||(50611543-50611594)
chr3 (316-353)||(25631653-25631690)
chr3 (316-357)||(35499327-35499368)
chr3 (316-368)||(14464404-14464456)
chr3 (316-368)||(44907525-44907577)
[»] chr2 (26 HSPs)
chr2 (316-368)||(39641985-39642037)
chr2 (323-368)||(32680715-32680760)
chr2 (316-368)||(6173535-6173587)
chr2 (316-367)||(3725085-3725136)
chr2 (316-367)||(32197920-32197971)
chr2 (316-362)||(34598897-34598943)
chr2 (316-357)||(31581845-31581886)
chr2 (316-368)||(21570534-21570586)
chr2 (316-368)||(27249277-27249329)
chr2 (316-368)||(30420580-30420632)
chr2 (316-368)||(36233908-36233960)
chr2 (316-377)||(18694941-18695003)
chr2 (323-357)||(26025542-26025576)
chr2 (323-368)||(459407-459452)
chr2 (316-357)||(4192753-4192794)
chr2 (316-357)||(8805781-8805822)
chr2 (316-357)||(13719285-13719326)
chr2 (316-357)||(24587628-24587669)
chr2 (323-368)||(27477058-27477103)
chr2 (323-368)||(40626160-40626205)
chr2 (323-368)||(41430931-41430976)
chr2 (323-368)||(45128107-45128152)
chr2 (316-368)||(2808596-2808648)
chr2 (316-368)||(3270354-3270406)
chr2 (316-352)||(7015836-7015872)
chr2 (316-368)||(32913145-32913197)
[»] chr1 (21 HSPs)
chr1 (316-368)||(28035042-28035094)
chr1 (316-377)||(7997681-7997742)
chr1 (316-377)||(38520659-38520720)
chr1 (316-368)||(5701160-5701212)
chr1 (316-368)||(14545423-14545475)
chr1 (316-368)||(25728085-25728137)
chr1 (316-368)||(30818471-30818523)
chr1 (316-368)||(35584747-35584799)
chr1 (316-367)||(40881139-40881190)
chr1 (316-357)||(5324683-5324724)
chr1 (316-357)||(7312224-7312265)
chr1 (316-357)||(9919303-9919344)
chr1 (316-357)||(18569436-18569477)
chr1 (323-368)||(25406417-25406462)
chr1 (323-368)||(51868778-51868823)
chr1 (316-368)||(27872642-27872694)
chr1 (323-367)||(51871768-51871812)
chr1 (316-367)||(20266206-20266257)
chr1 (316-367)||(40646592-40646643)
chr1 (323-377)||(45805942-45805996)
chr1 (316-357)||(19716023-19716064)
[»] chr5 (20 HSPs)
chr5 (315-368)||(16981192-16981245)
chr5 (316-368)||(26578151-26578203)
chr5 (323-368)||(7150468-7150513)
chr5 (323-368)||(19281077-19281122)
chr5 (316-368)||(781291-781343)
chr5 (316-368)||(10649355-10649407)
chr5 (316-368)||(27266986-27267038)
chr5 (316-368)||(30371626-30371678)
chr5 (316-368)||(43261943-43261995)
chr5 (316-367)||(2057964-2058015)
chr5 (318-361)||(27576477-27576520)
chr5 (323-357)||(7241695-7241729)
chr5 (323-357)||(7246871-7246905)
chr5 (316-370)||(19100767-19100821)
chr5 (316-357)||(11767720-11767761)
chr5 (316-357)||(18677592-18677633)
chr5 (316-357)||(21060407-21060448)
chr5 (316-368)||(3271534-3271585)
chr5 (316-368)||(28235487-28235539)
chr5 (323-367)||(36344622-36344666)
[»] chr6 (19 HSPs)
chr6 (316-368)||(12652839-12652891)
chr6 (316-367)||(33740704-33740755)
chr6 (316-377)||(8266525-8266586)
chr6 (316-368)||(4984704-4984755)
chr6 (316-368)||(7881229-7881281)
chr6 (316-368)||(8496864-8496916)
chr6 (323-367)||(16419058-16419102)
chr6 (316-368)||(23947443-23947495)
chr6 (316-367)||(7876171-7876222)
chr6 (316-355)||(8196533-8196572)
chr6 (316-357)||(4468469-4468510)
chr6 (316-349)||(13436705-13436738)
chr6 (323-368)||(17237417-17237462)
chr6 (324-369)||(23217124-23217169)
chr6 (316-357)||(25064145-25064186)
chr6 (316-357)||(33109744-33109785)
chr6 (326-366)||(3108468-3108508)
chr6 (316-356)||(8028244-8028284)
chr6 (316-368)||(12165740-12165792)
[»] scaffold0146 (1 HSPs)
scaffold0146 (316-367)||(16448-16499)
[»] scaffold0134 (1 HSPs)
scaffold0134 (323-372)||(17405-17454)
[»] scaffold0311 (1 HSPs)
scaffold0311 (316-368)||(8619-8671)


Alignment Details
Target: chr8 (Bit Score: 371; Significance: 0; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 3 - 513
Target Start/End: Complemental strand, 18734284 - 18733769
Alignment:
Q  3 acattgaatctccaacaatagagatgagaggactcaacaacattaaggtatgaaaattgagagtgttgagttggttttagctttttatttatttataagt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  18734284 acattgaatctccaacaatagagatgagaggactcaacaacattaaggtatgaaaattgattgtgttgagttggttttagctttttatttatttataagt 18734185  T
Q  103 gaaacaaatacaaacaaacttgatgatatttgtttgtttcagttgaccggttcatctaaaaatcaattgaatatttaatctttcaatataaaacaaataa 202  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18734184 gaaacaaatacaaacaaacttgatgatatttgtttgtttcatttgaccggttcatctaaaaatcaattgaatatttaatctttcaatataaaacaaataa 18734085  T
Q  203 acaccacaacaacaagaagataaattaacatcgctgcacaagacggcaaacaacacatcgtcacattcagacaatgatatcacgaagaaagnnnnnnnnn 302  Q
    ||||||||   ||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||| |||| |||||||||||||||||              
T  18734084 acaccaca---acaagaagagaaattaacatcgccgcacaagacggcgaacaacacatcgtcacattgagacgatgatatcacgaagaaa-----aaaaa 18733993  T
Q  303 ccagatctattttaaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttcggataaaaattt-------------ctcctcaat 389  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||             |||||||||    
T  18733992 ccagatctatttaaaatcaattatttaaattgaaatagagagaaaaagatgaagaatactgatttcggttaaaaatttgacccacaaccacctcctcaat 18733893  T
Q  390 aaagaaaatgaaagagaggaccttgagagagaaaactagaatcggcgttaccttcatttccatttattttgtctcatattatctactttatcttctttta 489  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18733892 aaagaaaatggaagagaggacctagagagagaaaactagagtcggcgttaccttcatttccatttattttgtctcatattatctactttatcttctttta 18733793  T
Q  490 ttttccttaaagaccgaaaataag 513  Q
    ||||||||||||||||||||||||    
T  18733792 ttttccttaaagaccgaaaataag 18733769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 46 - 292
Target Start/End: Complemental strand, 18726616 - 18726365
Alignment:
Q  46 taaggtatgaaaattgagagtgttgagttggttttagcttttt-----atttatttataagtgaaacaaatacaaacaaacttgatgatatttgtttgtt 140  Q
    |||| ||||| ||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18726616 taagatatgagaattgagagtgttgagttggttttagcttttttatttatttatttataagtgaaacaaatacaaacaaacttgatgatatttgtttgtt 18726517  T
Q  141 tcagttgaccggttcatctaaaaatcaattgaatatttaatctttcaatataaaacaaataaacaccacaacaacaagaagataaattaacatcgctgca 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18726516 tcagttgaccggttcatctaaaaatcaattgaatatttaatctttcaatataaaacaaataaacaccacaacaacaagaagataaattaacatcgctgca 18726417  T
Q  241 caagacggcaaacaacacatcgtcacattcagacaatgatatcacgaagaaa 292  Q
     || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18726416 taaaacggcaaacaacacatcgtcacattcagacaatgatatcacgaagaaa 18726365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 470 - 581
Target Start/End: Complemental strand, 18726352 - 18726242
Alignment:
Q  470 atctactttatcttcttttattttccttaaagaccgaaaataagnnnnnnnnnncttctgaagcactaatttggtcccataattacggtttttcttagga 569  Q
    |||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||    
T  18726352 atctactttatcttctttcattttccttaaagaccgaaaataagttttttttt-cttctgaagcactaatttggtcccataattacggtttttcttagga 18726254  T
Q  570 ataaattagttt 581  Q
    ||| ||||||||    
T  18726253 atacattagttt 18726242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 316 - 367
Target Start/End: Complemental strand, 35580416 - 35580365
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  35580416 aaatcacttatttaaattgaaatagagagaaaaagatgaagatgagtgattt 35580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 368
Target Start/End: Complemental strand, 9072668 - 9072623
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||    
T  9072668 ttatttaaattgaaatagagagaaaaagatgaagaggggtgatttc 9072623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 368
Target Start/End: Complemental strand, 29777180 - 29777135
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  29777180 ttatttagattgaaatagagagaaaaagatgaagaggagtgatttc 29777135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 42448153 - 42448206
Alignment:
Q  315 taaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  42448153 taaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttc 42448206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 44577995 - 44577943
Alignment:
Q  315 taaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||| |||||||||    
T  44577995 taaatcacttagttagattgaaatagagagaaaaagatgaagaggagtgattt 44577943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 18727004 - 18726969
Alignment:
Q  4 cattgaatctccaacaatagagatgagaggactcaa 39  Q
    ||||||||||||||||||||||||||||||||||||    
T  18727004 cattgaatctccaacaatagagatgagaggactcaa 18726969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 9619484 - 9619536
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  9619484 aaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttc 9619536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 14907050 - 14907102
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  14907050 aaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgatttc 14907102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 16794251 - 16794199
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| |||||| |||||||||||||||||||| | ||||||||    
T  16794251 aaatcacttatttagattgaattagagagaaaaagatgaagatgggtgatttc 16794199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 366
Target Start/End: Complemental strand, 2655827 - 2655777
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatt 366  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | ||||||    
T  2655827 aaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgatt 2655777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 370
Target Start/End: Original strand, 24853564 - 24853618
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttcgg 370  Q
    |||||| ||||||| ||| ||||||| ||||||||| ||||| ||||||||||||    
T  24853564 aaatcacttatttacattaaaatagaaagaaaaagacgaagatgagtgatttcgg 24853618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 357
Target Start/End: Complemental strand, 28239784 - 28239750
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaaga 357  Q
    ||||||| |||||||||||||||||||||||||||    
T  28239784 ttatttagattgaaatagagagaaaaagatgaaga 28239750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 368
Target Start/End: Complemental strand, 17949198 - 17949153
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| |||||||||||||||||||| |||||| | ||||||||    
T  17949198 ttatttagattgaaatagagagaaaaaggtgaagaggggtgatttc 17949153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 27747245 - 27747290
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||||||||||||| |||| ||||||||||||||  ||||||||    
T  27747245 ttatttaaattgaaatggagataaaaagatgaagaatggtgatttc 27747290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 37566005 - 37566058
Alignment:
Q  316 aaatcaattatttaaattgaaatagaga-gaaaaagatgaagaagagtgatttc 368  Q
    |||||||||||||| |||||||||||||  ||||| ||||||||| ||||||||    
T  37566005 aaatcaattatttagattgaaatagagataaaaaaaatgaagaagggtgatttc 37566058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 9498728 - 9498780
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||| ||||||||||||| | ||||||||    
T  9498728 aaatcacttatttagattgaaataaagataaaaagatgaagaggggtgatttc 9498780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 553 - 581
Target Start/End: Complemental strand, 18733748 - 18733720
Alignment:
Q  553 tacggtttttcttaggaataaattagttt 581  Q
    |||||||||||||||||||||||||||||    
T  18733748 tacggtttttcttaggaataaattagttt 18733720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 19876170 - 19876118
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| |||||||||  |||||||||||||||| |||| |||||    
T  19876170 aaatcacttatttagattgaaatattgagaaaaagatgaagatgagtaatttc 19876118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 32724615 - 32724666
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| |||||||||||||| ||||||||||||  |||||||||    
T  32724615 aaatcacttatttagattgaaatagagag-aaaagatgaagagaagtgatttc 32724666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 39153271 - 39153335
Alignment:
Q  316 aaatcaattatttaaattgaaatagag-agaaaaagatgaagaagagtgatttcggataaaaatt 379  Q
    |||||| |||||||||||||||| ||  ||| ||||||||||| ||||||||||||  |||||||    
T  39153271 aaatcacttatttaaattgaaattgactagacaaagatgaagatgagtgatttcggtcaaaaatt 39153335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 43890251 - 43890303
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| |||||| || ||||||||||||||||| | ||||||||    
T  43890251 aaatcacttatttagattgaattaaagagaaaaagatgaagaggggtgatttc 43890303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 323 - 367
Target Start/End: Original strand, 44100065 - 44100109
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    ||||||| ||||||||| ||||||||||||||||| | |||||||    
T  44100065 ttatttagattgaaatatagagaaaaagatgaagaggggtgattt 44100109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 414 - 509
Target Start/End: Original strand, 1098724 - 1098820
Alignment:
Q  414 gagagagaaaactagaatcggcgttaccttcatttccatttattttg-tctcatattatctactttatcttcttttattttccttaaagaccgaaaa 509  Q
    ||||||||||||||| | || | |||||||||||| | ||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1098724 gagagagaaaactaggaccgactttaccttcattttcttttatttttctctcatattatctactttatcttcttttattttccttaaagactgaaaa 1098820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 1100687 - 1100794
Alignment:
Q  109 aatacaaacaaacttgatgatatttg-tttgtttcagttgaccggttcatctaaaaatcaattgaatatttaatc-tttcaatataaaacaaataaacac 206  Q
    ||||||||| || | || |||||||| |||||||||||||||| |||||||||||| || ||||||||  | ||| |||||||||||||||||| |||||    
T  1100687 aatacaaactaaatcgacgatatttggtttgtttcagttgaccagttcatctaaaattcgattgaataactcatcttttcaatataaaacaaatgaacac 1100786  T
Q  207 cacaacaa 214  Q
     |||||||    
T  1100787 aacaacaa 1100794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 1097625 - 1097709
Alignment:
Q  209 caacaacaagaagataaattaacatcgctgcacaagacggcaaacaacacatcgtcacattcagac-aatgatatcacgaagaaa 292  Q
    |||||||||||||| ||||||||| |   |||||||||||| ||| |||| ||||||||||||||| | ||||||||||||||||    
T  1097625 caacaacaagaagagaaattaacaacatcgcacaagacggcgaactacacgtcgtcacattcagacgattgatatcacgaagaaa 1097709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 323 - 470
Target Start/End: Original strand, 1575209 - 1575370
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttcggataaaaatttctcc--------------tcaataaagaaaatgaaagagagg 408  Q
    |||| ||||||||||||  |||||||||||||||| |||||||||||||| ||||| | |||              ||||| |||||||||||||||| |    
T  1575209 ttatgtaaattgaaataaggagaaaaagatgaagatgagtgatttcggatcaaaatatgtcctcaaaaccaccttgtcaatgaagaaaatgaaagagatg 1575308  T
Q  409 accttgagagagaaaactagaatcggcgttaccttcatttccatttattttgtctcatatta 470  Q
    || | ||||| ||||||||| | || | |||||||||||| | |||||||| ||||||||||    
T  1575309 acatagagagggaaaactaggaccgactttaccttcattttcttttattttctctcatatta 1575370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 1575020 - 1575100
Alignment:
Q  134 gtttgtttcagttgaccggttcatctaaaaa-tcaattgaatat--ttaatctttcaatataaaacaaataaacaccacaa 211  Q
    |||| |||||||||||||||||||| ||||| |||||||||||   || || |||||||||||||||||| ||||||||||    
T  1575020 gtttctttcagttgaccggttcatcaaaaaaatcaattgaataaagttgatatttcaatataaaacaaatgaacaccacaa 1575100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 26492316 - 26492275
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  26492316 aaatcacttatttaaattgaaatagagagaaaaagatgaaga 26492275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 20116534 - 20116482
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  20116534 aaatcacttatttagattgaaatagatagaaaaagatgaagaagggtgatttc 20116482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 1097245 - 1097310
Alignment:
Q  4 cattgaatctccaacaatagagatgagaggactcaacaacattaaggtatgaaaattgagagtgttgagt 73  Q
    |||||||||||||||||| |||| |||||||||   |||||||||||||||| |||||||| ||||||||    
T  1097245 cattgaatctccaacaattgagaagagaggact---caacattaaggtatgagaattgaga-tgttgagt 1097310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 329 - 380
Target Start/End: Original strand, 1100904 - 1100955
Alignment:
Q  329 aaattgaaatagagagaaaaagatgaagaagagtgatttcggataaaaattt 380  Q
    ||||||||||||||||||||||||||||| ||||| |||||| | |||||||    
T  1100904 aaattgaaatagagagaaaaagatgaagatgagtggtttcgggtcaaaattt 1100955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 35667357 - 35667408
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| ||||||| ||||||||||||||||||| ||||||||| |||||||    
T  35667357 aaatcacttatttagattgaaatagagagaaaaatatgaagaagggtgattt 35667408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 31235918 - 31235959
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  31235918 aaatcacttatttagattgaaatagagagaaaaagatgaaga 31235959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 367
Target Start/End: Original strand, 1485389 - 1485433
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    ||||||| ||||||||||||||||||||||||||| | |||||||    
T  1485389 ttatttagattgaaatagagagaaaaagatgaagacgggtgattt 1485433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 23425497 - 23425549
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  23425497 aaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgatttc 23425549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 26583665 - 26583613
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||||||| ||||||||||||| | ||||||||    
T  26583665 aaatcacttatttagattgaaatagagataaaaagatgaagaggggtgatttc 26583613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 45199157 - 45199209
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||||||| ||||| ||||||||||||||||| | ||||||||    
T  45199157 aaatcacttatttaaattaaaatatagagaaaaagatgaagatgggtgatttc 45199209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 46821965 - 46821913
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  46821965 aaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttc 46821913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 1572420 - 1572455
Alignment:
Q  1 caacattgaatctccaacaatagagatgagaggact 36  Q
    |||||| |||||||||||||||||||||||||||||    
T  1572420 caacatagaatctccaacaatagagatgagaggact 1572455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 357
Target Start/End: Complemental strand, 23085469 - 23085431
Alignment:
Q  319 tcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  23085469 tcaattatttagattgaaatagaaagaaaaagatgaaga 23085431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 2843353 - 2843394
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  2843353 aaatcacttatttagattgaaataaagagaaaaagatgaaga 2843394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 21266343 - 21266302
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  21266343 aaatcacttatttagattgaaataaagagaaaaagatgaaga 21266302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 22928003 - 22928048
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||||||||||||||||||||| | | ||||||||    
T  22928003 ttatttagattgaaatagagagaaaaagatgaaaaggggtgatttc 22928048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 32684636 - 32684595
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| |||||||||||||||||| ||||||||    
T  32684636 aaatcacttatttagattgaaatagagagaaaacgatgaaga 32684595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 35496301 - 35496342
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||| ||| |||||||||||||||||||||||||||    
T  35496301 aaatcacttaattagattgaaatagagagaaaaagatgaaga 35496342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 42408309 - 42408272
Alignment:
Q  320 caattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  42408309 caattatttagattgaaataaagagaaaaagatgaaga 42408272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 46339004 - 46338963
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  46339004 aaatcacttatttacattgaaataaagagaaaaagatgaaga 46338963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 323 - 355
Target Start/End: Original strand, 433825 - 433857
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaa 355  Q
    ||||||| |||||||||||||||||||||||||    
T  433825 ttatttagattgaaatagagagaaaaagatgaa 433857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 1448955 - 1448995
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaag 356  Q
    |||||| ||||||| ||||||||||||||||| ||||||||    
T  1448955 aaatcacttatttagattgaaatagagagaaagagatgaag 1448995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 6001972 - 6001920
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||| |||||| |||||||||||||||| | ||||||||    
T  6001972 aaatcacttatttagattaaaatagggagaaaaagatgaagatgggtgatttc 6001920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 48207853 - 48207801
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| |||||||||  |||||||||||||||| | ||||||||    
T  48207853 aaatcacttatttagattgaaatattgagaaaaagatgaagaggggtgatttc 48207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 414 - 512
Target Start/End: Complemental strand, 12184 - 12086
Alignment:
Q  414 gagagagaaaactagaatcggcgttaccttcatttccatttattttgtctcatattatctactttatcttcttttattttccttaaagaccgaaaataa 512  Q
    |||||||||||||||    ||| |||||||||||| | |||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  12184 gagagagaaaactaggtctggctttaccttcattttcttttatttcctctcatattatctgatttatcttcttttattttccttaaagaccgaaaataa 12086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 21090116 - 21090064
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  21090116 aaatcacttatttatattgaaatagagagaaaaagatgaagatgagtgatttc 21090064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 51317949 - 51317897
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  51317949 aaatcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttc 51317897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 38706836 - 38706887
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| ||||||| ||||||||||||||||||||||||||||| |||||||    
T  38706836 aaatcacttatttagattgaaatagagagaaaaagatgaagaagggtgattt 38706887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 10389886 - 10389931
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  10389886 ttatttagattgaaatagagagaaaaagatgaagatgagtgatttc 10389931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 2115714 - 2115766
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| |||||||||||||||||| |||||||||    
T  2115714 aaatcacttatttagattgaaataaagagaaaaagatgaagaaaagtgatttc 2115766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 357
Target Start/End: Complemental strand, 4643832 - 4643780
Alignment:
Q  305 agatctattttaaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||||| | |||||| ||||||| |||||||||||||||||||||||||||    
T  4643832 agatctatgtgaaatcacttatttagattgaaatagagagaaaaagatgaaga 4643780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 5333585 - 5333637
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  5333585 aaatcacttatttatattgaaatagagagaaaaagatgaagatgtgtgatttc 5333637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 37188718 - 37188770
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  37188718 aaatcacttatttagattgaaatatagagaaaaagatgaagatgagtgatttc 37188770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 358
Target Start/End: Original strand, 8009485 - 8009527
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaa 358  Q
    |||||| ||||||| ||||||||||||||||||||||||||||    
T  8009485 aaatcacttatttagattgaaatagagagaaaaagatgaagaa 8009527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 5333657 - 5333698
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  5333657 aaatcacttatttatattgaaatagagagaaaaagatgaaga 5333698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 34024569 - 34024614
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  34024569 ttatttagattgaaatagagagaaaaagatgaagaggggtgatttc 34024614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 316 - 377
Target Start/End: Complemental strand, 43444356 - 43444295
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttcggataaaaa 377  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | |||||||| ||| ||||    
T  43444356 aaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgatttcagatcaaaa 43444295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 1008258 - 1008206
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||| ||||||||||||||||||| ||| ||||||||||    
T  1008258 aaatcacttatttagattaaaatagagagaaaaagatgcagatgagtgatttc 1008206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 47416847 - 47416795
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  47416847 aaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttc 47416795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 358
Target Start/End: Original strand, 32952879 - 32952914
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaa 358  Q
    |||||||| |||||||||||||||||||||||||||    
T  32952879 ttatttaatttgaaatagagagaaaaagatgaagaa 32952914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 366
Target Start/End: Original strand, 18139039 - 18139089
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatt 366  Q
    |||||| ||||||| |||||||||||||||||| |||||||| | ||||||    
T  18139039 aaatcacttatttagattgaaatagagagaaaatgatgaagaggtgtgatt 18139089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 29289296 - 29289236
Alignment:
Q  316 aaatcaattatttaaattgaaatagagag--aaaaagatgaagaagagtgatttcggataaa 375  Q
    |||||| |||||||||| |||||||||||  ||||| |||||||||| ||||||||||||||    
T  29289296 aaatcacttatttaaat-gaaatagagaggaaaaaaaatgaagaagaatgatttcggataaa 29289236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 31381797 - 31381835
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatga 354  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  31381797 aaatcacttatttaaattgaaaaagagagaaaaagatga 31381835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 366
Target Start/End: Original strand, 49126252 - 49126302
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatt 366  Q
    |||||| ||||||| |||||||||||||||||| |||||||| | ||||||    
T  49126252 aaatcacttatttagattgaaatagagagaaaatgatgaagaggtgtgatt 49126302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 357
Target Start/End: Complemental strand, 56194555 - 56194521
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaaga 357  Q
    ||||||| |||||||||||||||||||||||||||    
T  56194555 ttatttagattgaaatagagagaaaaagatgaaga 56194521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 353
Target Start/End: Complemental strand, 14183766 - 14183729
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatg 353  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  14183766 aaatcacttatttagattgaaatagagagaaaaagatg 14183729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 35965101 - 35965142
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||| | |||||||||||||||||||||||||||    
T  35965101 aaatcacttattcagattgaaatagagagaaaaagatgaaga 35965142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 50766635 - 50766676
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  50766635 aaatcatttatttagattgaaataaagagaaaaagatgaaga 50766676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 368
Target Start/End: Complemental strand, 868104 - 868068
Alignment:
Q  332 ttgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||||||||||||||||||||||| | ||||||||    
T  868104 ttgaaatagagagaaaaagatgaagaggggtgatttc 868068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 9529004 - 9529056
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| |||||||||||| |||| | ||||||||    
T  9529004 aaatcacttatttagattgaaataaagagaaaaagataaagaggggtgatttc 9529056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 10359672 - 10359712
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaag 356  Q
    |||||| ||||||| || |||||||||||||||||||||||    
T  10359672 aaatcacttatttagatcgaaatagagagaaaaagatgaag 10359712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 12265418 - 12265366
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| |||||||||| || ||||||||||||| | ||||||||    
T  12265418 aaatcacttatttagattgaaatagggataaaaagatgaagaggggtgatttc 12265366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 43154147 - 43154198
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| |||||||||||||| |||||||||||| | ||||||||    
T  43154147 aaatcacttatttagattgaaatagagag-aaaagatgaagaggggtgatttc 43154198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 22802970 - 22802918
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  22802970 aaatcacttatttagattgaaatagagagaaaaagatgaagaggagtgatttc 22802918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 368
Target Start/End: Complemental strand, 25162396 - 25162333
Alignment:
Q  305 agatctattttaaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||||| | |||||| ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  25162396 agatctatgtgaaatcacttatttagattgaaatagagagaaaaagatgaagatgggtgatttc 25162333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 36906070 - 36906018
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  36906070 aaatcacttatttatattgaaataaagagaaaaagatgaagaagggtgatttc 36906018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 38440703 - 38440755
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| |||||||||||||||||||||| |||| ||||||||||    
T  38440703 aaatcacttatttagattgaaatagagagaaaaagataaagaggagtgatttc 38440755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 42719469 - 42719417
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||||||||||||||||||||||| | ||||| ||||||||||    
T  42719469 aaatcacttatttaaattgaaatagagagaaaaatacgaagatgagtgatttc 42719417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 316 - 367
Target Start/End: Complemental strand, 4178513 - 4178462
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| ||||||| ||||||||||||||||||||||||||| | |||||||    
T  4178513 aaatcacttatttagattgaaatagagagaaaaagatgaagatgggtgattt 4178462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 2342440 - 2342399
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  2342440 aaatcacttatttagattgaaatagagagaaaaagatgaaga 2342399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 3850588 - 3850633
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  3850588 ttatttagattgaaatagagagaaaaagatgaagaggggtgatttc 3850633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 4172515 - 4172474
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  4172515 aaatcacttatttagattgaaatagagagaaaaagatgaaga 4172474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 29503411 - 29503359
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||||||||||| ||||||||| ||||||||| ||||||| | ||||||||    
T  29503411 aaatcaattatttagattgaaatatagagaaaaatatgaagatgggtgatttc 29503359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 46934591 - 46934539
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||||||||| ||||||||||| | ||||||||    
T  46934591 aaatcacttatttagattgaaatagagagagaaagatgaagaggggtgatttc 46934539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 367
Target Start/End: Complemental strand, 17237751 - 17237700
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| ||||||| ||||||||||||||||| ||||||||| || ||||||    
T  17237751 aaatcacttatttagattgaaatagagagaaacagatgaagatgaatgattt 17237700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 38855163 - 38855214
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| ||||||| ||||| ||||||||||||||||||||| | |||||||    
T  38855163 aaatcacttatttagattgatatagagagaaaaagatgaagaggggtgattt 38855214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 50611543 - 50611594
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | |||||||    
T  50611543 aaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgattt 50611594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 25631653 - 25631690
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatg 353  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  25631653 aaatcacttatttagattgaaatagagagaaaaagatg 25631690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 35499327 - 35499368
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  35499327 aaatcacttatttagattgaaataaagagaaaaagatgaaga 35499368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 14464456 - 14464404
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||| | | ||||||||    
T  14464456 aaatcacttatttagattgaaataaagagaaaaagatgaataggggtgatttc 14464404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 44907525 - 44907577
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| || |||| ||||||||| ||||||||||||||||| | ||||||||    
T  44907525 aaatcacttgtttagattgaaataaagagaaaaagatgaagaggggtgatttc 44907577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 39641985 - 39642037
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  39641985 aaatcatttatttaaattgaaatagagagaaaaagatgaagataagtgatttc 39642037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 32680715 - 32680760
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  32680715 ttatttagattgaaatagagagaaaaagatgaagatgagtgatttc 32680760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 6173587 - 6173535
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  6173587 aaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttc 6173535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 316 - 367
Target Start/End: Complemental strand, 3725136 - 3725085
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| ||||||| ||||||||||||||||||||||||||| || ||||||    
T  3725136 aaatcacttatttatattgaaatagagagaaaaagatgaagaggaatgattt 3725085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 32197920 - 32197971
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| |||||||||    
T  32197920 aaatcatttatttatattgaaataaagagaaaaagatgaagatgagtgattt 32197971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 362
Target Start/End: Complemental strand, 34598943 - 34598897
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagt 362  Q
    |||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  34598943 aaatcacttatttagattgaaatagagagaaaaagatgaagatgagt 34598897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 31581845 - 31581886
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  31581845 aaatcacttatttagattgaaatagagagaaaaagatgaaga 31581886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 21570534 - 21570586
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  21570534 aaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgatttc 21570586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 27249277 - 27249329
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  27249277 aaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttc 27249329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 30420632 - 30420580
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  30420632 aaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttc 30420580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 36233960 - 36233908
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  36233960 aaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttc 36233908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 377
Target Start/End: Complemental strand, 18695003 - 18694941
Alignment:
Q  316 aaatcaattatttaaattgaaatagagaga-aaaagatgaagaagagtgatttcggataaaaa 377  Q
    |||||| ||||||| ||||||||||||||| |||||||||||| || |||||| || ||||||    
T  18695003 aaatcacttatttagattgaaatagagagaaaaaagatgaagatgaatgattttgggtaaaaa 18694941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 357
Target Start/End: Original strand, 26025542 - 26025576
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaaga 357  Q
    ||||||| |||||||||||||||||||||||||||    
T  26025542 ttatttagattgaaatagagagaaaaagatgaaga 26025576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 459407 - 459452
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||||| |||||||||||||||| |||||||| | ||||||||    
T  459407 ttatttaaaatgaaatagagagaaaaggatgaagaggggtgatttc 459452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 4192794 - 4192753
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  4192794 aaatcacttatttagattgaaatatagagaaaaagatgaaga 4192753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 8805822 - 8805781
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||||||||||||| ||||||||| |||||||    
T  8805822 aaatcacttatttaaattgaaataaagagaaaaatatgaaga 8805781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 13719285 - 13719326
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| |||||||||||||||| |||||||||||| |||||    
T  13719285 aaatcacttatttaaattgaaatggagagaaaaagacgaaga 13719326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 24587669 - 24587628
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||||||||||||| ||| |||||||||||||    
T  24587669 aaatcatttatttaaattgaaatatagataaaaagatgaaga 24587628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 368
Target Start/End: Complemental strand, 27477103 - 27477058
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  27477103 ttatttagattgaaatatagagaaaaagatgaagaggggtgatttc 27477058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 40626160 - 40626205
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||||||||||||||||| ||||| | ||||||||    
T  40626160 ttatttagattgaaatagagagaaaaagacgaagaggggtgatttc 40626205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 368
Target Start/End: Complemental strand, 41430976 - 41430931
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  41430976 ttatttagattgaaatatagagaaaaagatgaagaggggtgatttc 41430931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 368
Target Start/End: Complemental strand, 45128152 - 45128107
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  45128152 ttatttagattgaaataaagagaaaaagatgaagaggggtgatttc 45128107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 2808596 - 2808648
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| | ||||||||||||||| ||||||||| | ||||||||    
T  2808596 aaatcacttatttagactgaaatagagagaaatagatgaagaggggtgatttc 2808648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 3270354 - 3270406
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| | ||||||||||||| | ||||||||||    
T  3270354 aaatcacttatttagattgaaataaaaagaaaaagatgaaaatgagtgatttc 3270406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 352
Target Start/End: Original strand, 7015836 - 7015872
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagat 352  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  7015836 aaatcaattatttagattgaaataaagagaaaaagat 7015872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 32913197 - 32913145
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||||||||||||| |||||||| ||| |||| | ||||||||    
T  32913197 aaatcacttatttaaattgaaatatagagaaaaggatcaagaggggtgatttc 32913145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 28035094 - 28035042
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  28035094 aaatcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttc 28035042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 316 - 377
Target Start/End: Complemental strand, 7997742 - 7997681
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttcggataaaaa 377  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||| |||||||| ||| ||||    
T  7997742 aaatcacttatttatattgaaataaagagaaaaagatgaagaagggtgatttcagatcaaaa 7997681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 316 - 377
Target Start/End: Original strand, 38520659 - 38520720
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttcggataaaaa 377  Q
    |||||| ||||||| || |||||||||||||||||||||||| |||||||||| | ||||||    
T  38520659 aaatcacttatttagatcgaaatagagagaaaaagatgaagatgagtgatttcaggtaaaaa 38520720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 5701212 - 5701160
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||||||||||||| ||||||||||||||||| | ||||||||    
T  5701212 aaatcacttatttaaattgaaataaagagaaaaagatgaagaggggtgatttc 5701160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 14545475 - 14545423
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  14545475 aaatcacttatttagattgaaatatagagaaaaagatgaagatgagtgatttc 14545423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 25728085 - 25728137
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  25728085 aaatcacttatttagattgaaataaagagaaaaagatgaagaggagtgatttc 25728137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 30818471 - 30818523
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  30818471 aaatcacttatttagattgaaatagagagaaaaagatgaagatgggtgatttc 30818523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 35584747 - 35584799
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  35584747 aaatcacttatttagattgaaataaagagaaaaagatgaagatgagtgatttc 35584799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 40881139 - 40881190
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| | ||||| ||||||||||||||||||||||||||| |||||||||    
T  40881139 aaatcactcatttagattgaaatagagagaaaaagatgaagatgagtgattt 40881190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 5324683 - 5324724
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  5324683 aaatcacttatttagattgaaatagagagaaaaagatgaaga 5324724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 7312224 - 7312265
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| |||||||| ||||||||||||||||||||||||||    
T  7312224 aaatcatttatttaatttgaaatagagagaaaaagatgaaga 7312265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 9919344 - 9919303
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  9919344 aaatcacttatttagattgaaatagagagaaaaagatgaaga 9919303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 18569436 - 18569477
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  18569436 aaatcacttatttagattgaaatagagagaaaaagatgaaga 18569477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 25406417 - 25406462
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  25406417 ttatttagattgaaatagagagaaaaagatgaagaggtgtgatttc 25406462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 51868778 - 51868823
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  51868778 ttatttagattgaaatagagagaaaaagatgaagaggggtgatttc 51868823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 27872694 - 27872642
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| |||||||||||| |||||||||||||| | ||||||||    
T  27872694 aaatcacttatttagattgaaatagagcgaaaaagatgaagatgggtgatttc 27872642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 367
Target Start/End: Complemental strand, 51871812 - 51871768
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    ||||||| ||||||||||||||||||||||||||| | |||||||    
T  51871812 ttatttagattgaaatagagagaaaaagatgaagaggggtgattt 51871768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 367
Target Start/End: Complemental strand, 20266257 - 20266206
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | |||||||    
T  20266257 aaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgattt 20266206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 367
Target Start/End: Complemental strand, 40646643 - 40646592
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| ||||||| ||||||||| | ||||||||||||||| |||||||||    
T  40646643 aaatcacttatttagattgaaataaatagaaaaagatgaagatgagtgattt 40646592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 377
Target Start/End: Original strand, 45805942 - 45805996
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttcggataaaaa 377  Q
    ||||||| ||||||||||||||||||||| ||||||  |||||||| ||| ||||    
T  45805942 ttatttagattgaaatagagagaaaaagaggaagaaaggtgatttcagatcaaaa 45805996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 19716023 - 19716064
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  19716023 aaatcacttatttagattgaaataaagagaaaaagatgaaga 19716064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 16981245 - 16981192
Alignment:
Q  315 taaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  16981245 taaatcacttatttagattgaaatagagagaaaaatatgaagaggagtgatttc 16981192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 26578203 - 26578151
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  26578203 aaatcacttatttagattgaaataaagagaaaaagatgaagatgagtgatttc 26578151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 7150468 - 7150513
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  7150468 ttatttagattgaaatagagagaaaaagatgaagaggggtgatttc 7150513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 19281077 - 19281122
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  19281077 ttatttagattgaaatagagagaaaaagatgaagatgggtgatttc 19281122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 781343 - 781291
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  781343 aaatcacttatttagattgaaatatagagaaaaagatgaagatgggtgatttc 781291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 10649407 - 10649355
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  10649407 aaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttc 10649355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 27266986 - 27267038
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||||||||||||| ||||||| | ||||||||    
T  27266986 aaatcacttatttagattgaaatagagagaaaaatatgaagaggggtgatttc 27267038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 30371678 - 30371626
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  30371678 aaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttc 30371626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 43261943 - 43261995
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||||||| ||||||||||||| | ||||||||    
T  43261943 aaatcacttatttagattgaaatagagataaaaagatgaagatgggtgatttc 43261995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 2057964 - 2058015
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | |||||||    
T  2057964 aaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgattt 2058015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 27576477 - 27576520
Alignment:
Q  318 atcaattatttaaattgaaatagagagaaaaagatgaagaagag 361  Q
    |||| ||||||| |||||||||||||||||| ||||||||||||    
T  27576477 atcacttatttacattgaaatagagagaaaaggatgaagaagag 27576520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 357
Target Start/End: Complemental strand, 7241729 - 7241695
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaaga 357  Q
    ||||||| |||||||||||||||||||||||||||    
T  7241729 ttatttagattgaaatagagagaaaaagatgaaga 7241695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 357
Target Start/End: Complemental strand, 7246905 - 7246871
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaaga 357  Q
    ||||||| |||||||||||||||||||||||||||    
T  7246905 ttatttagattgaaatagagagaaaaagatgaaga 7246871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 370
Target Start/End: Original strand, 19100767 - 19100821
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttcgg 370  Q
    |||||| |||||||||||||||||||||||||||  || | | ||||||||||||    
T  19100767 aaatcacttatttaaattgaaatagagagaaaaacgtgtaaatgagtgatttcgg 19100821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 11767761 - 11767720
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  11767761 aaatcacttatttagattgaaatatagagaaaaagatgaaga 11767720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 18677592 - 18677633
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| ||| |||||||||||||||||||||||    
T  18677592 aaatcacttatttagattaaaatagagagaaaaagatgaaga 18677633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 21060407 - 21060448
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  21060407 aaatcacttatttagattgaaatatagagaaaaagatgaaga 21060448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 3271534 - 3271585
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||| |||||||||| |||||||| ||||||||||    
T  3271534 aaatcacttatttagattgaaacagagagaaaa-gatgaagaggagtgatttc 3271585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 28235539 - 28235487
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| || |||||||| ||||||||||||||| | ||||||||    
T  28235539 aaatcacttatttagatcgaaatagaaagaaaaagatgaagaggggtgatttc 28235487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 323 - 367
Target Start/End: Original strand, 36344622 - 36344666
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    ||||||| ||||||||| ||||||||||||||||| | |||||||    
T  36344622 ttatttagattgaaatatagagaaaaagatgaagaggggtgattt 36344666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 12652891 - 12652839
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  12652891 aaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttc 12652839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 33740704 - 33740755
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| ||||||| ||||||||||||||||||||||||||| | |||||||    
T  33740704 aaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgattt 33740755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 316 - 377
Target Start/End: Complemental strand, 8266586 - 8266525
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttcggataaaaa 377  Q
    |||||| ||||||| |||||| ||||||||||||||||||||  ||||||||  ||||||||    
T  8266586 aaatcacttatttagattgaagtagagagaaaaagatgaagacaagtgatttaagataaaaa 8266525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 4984704 - 4984755
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  4984704 aaatcacttatttagattgaaatagagag-aaaagatgaagatgagtgatttc 4984755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 7881229 - 7881281
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||  ||||||||    
T  7881229 aaatcacttatttagattgaaataaagagaaaaagatgaagaaaggtgatttc 7881281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 8496916 - 8496864
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  8496916 aaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttc 8496864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 367
Target Start/End: Complemental strand, 16419102 - 16419058
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    ||||||| ||||||||||||||||||||||||||| | |||||||    
T  16419102 ttatttagattgaaatagagagaaaaagatgaagatgggtgattt 16419058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 23947443 - 23947495
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  23947443 aaatcacttatttagattgaaatagagagaaaacgatgaagatgggtgatttc 23947495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 7876171 - 7876222
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| | |||||||    
T  7876171 aaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgattt 7876222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 355
Target Start/End: Original strand, 8196533 - 8196572
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaa 355  Q
    |||||| ||||||| |||||||||||||||||||||||||    
T  8196533 aaatcacttatttagattgaaatagagagaaaaagatgaa 8196572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 4468510 - 4468469
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| |||||||||||||||| ||||||||||    
T  4468510 aaatcacttatttagattgaaatagagagaacaagatgaaga 4468469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 349
Target Start/End: Complemental strand, 13436738 - 13436705
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaa 349  Q
    |||||| |||||||||||||||||||||||||||    
T  13436738 aaatcacttatttaaattgaaatagagagaaaaa 13436705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 17237417 - 17237462
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    ||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  17237417 ttatttagattgaaatatagagaaaaagatgaagaggggtgatttc 17237462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 23217124 - 23217169
Alignment:
Q  324 tatttaaattgaaatagagagaaaaagatgaagaagagtgatttcg 369  Q
    ||||||||||||||||||||||||| ||||| |||  |||||||||    
T  23217124 tatttaaattgaaatagagagaaaatgatgacgaaaggtgatttcg 23217169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 25064186 - 25064145
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  25064186 aaatcacttatttagattgaaataaagagaaaaagatgaaga 25064145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 33109785 - 33109744
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaaga 357  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  33109785 aaatcacttatttagattgaaataaagagaaaaagatgaaga 33109744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 326 - 366
Target Start/End: Complemental strand, 3108508 - 3108468
Alignment:
Q  326 tttaaattgaaatagagagaaaaagatgaagaagagtgatt 366  Q
    |||| |||||||||||||||||||||| |||| ||||||||    
T  3108508 tttagattgaaatagagagaaaaagataaagatgagtgatt 3108468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 8028244 - 8028284
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaag 356  Q
    |||||| ||||||| ||||||| ||||||||||||||||||    
T  8028244 aaatcacttatttagattgaaacagagagaaaaagatgaag 8028284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 12165792 - 12165740
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||||  | ||||||||||||| ||||||||||    
T  12165792 aaatcacttatttagattgaaataggcataaaaagatgaagaggagtgatttc 12165740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 16448 - 16499
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgattt 367  Q
    |||||| ||||||| ||||||||||||||||| ||||||||| || ||||||    
T  16448 aaatcacttatttagattgaaatagagagaaacagatgaagatgaatgattt 16499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 17405 - 17454
Alignment:
Q  323 ttatttaaattgaaatagagagaaaaagatgaagaagagtgatttcggat 372  Q
    |||||||||||||||  ||||| |||||||||||||  ||||||||||||    
T  17405 ttatttaaattgaaaacgagaggaaaagatgaagaaaggtgatttcggat 17454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 8671 - 8619
Alignment:
Q  316 aaatcaattatttaaattgaaatagagagaaaaagatgaagaagagtgatttc 368  Q
    |||||| ||||||| ||||||||||||| ||||||||||| | | ||||||||    
T  8671 aaatcacttatttagattgaaatagagataaaaagatgaaaaggggtgatttc 8619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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