View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13764_low_61 (Length: 237)
Name: NF13764_low_61
Description: NF13764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13764_low_61 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 49166157 - 49166384
Alignment:
| Q |
1 |
atgttattaccgcaattatgcaaagatttattacttacataccaatgcaacagataaaattgaccttttatggtatttattagtcccaaatctagaagat |
100 |
Q |
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| T |
49166157 |
atgttattaccgcaattatgcaaagatttattacttacataccaatgcaacagataaaattgaccttttatggtatttattagtcccaaatctagaagat |
49166256 |
T |
|
| Q |
101 |
agttcataggtttgaatacttttggctacaggttcacaatacctacattttccaaatactagtatgcattatgttgcttgtatattcagtttattttcta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49166257 |
agttcataggtttgaatacttttggctacaggttcacaatacctacattttccaaatactagtatgcattatgttgcttgtatattcagtttattttcta |
49166356 |
T |
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| Q |
201 |
tttagtcttgttacattgttattttctt |
228 |
Q |
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|||| |||||| |||||||||||||||| |
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| T |
49166357 |
tttactcttgtgacattgttattttctt |
49166384 |
T |
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