View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13766_low_1 (Length: 759)

Name: NF13766_low_1
Description: NF13766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13766_low_1
NF13766_low_1
[»] chr4 (24 HSPs)
chr4 (8-374)||(17710710-17711077)
chr4 (401-746)||(13667372-13667716)
chr4 (401-746)||(13680229-13680573)
chr4 (226-374)||(11252693-11252841)
chr4 (166-350)||(25095743-25095929)
chr4 (251-374)||(22171143-22171266)
chr4 (220-374)||(7583382-7583536)
chr4 (220-374)||(15165841-15165995)
chr4 (173-374)||(8968564-8968768)
chr4 (220-374)||(17108055-17108206)
chr4 (195-374)||(16730657-16730837)
chr4 (226-377)||(37740992-37741143)
chr4 (173-374)||(17335863-17336065)
chr4 (314-373)||(11781926-11781985)
chr4 (294-367)||(17025299-17025372)
chr4 (314-374)||(10105667-10105727)
chr4 (246-370)||(19557085-19557209)
chr4 (261-374)||(17217946-17218057)
chr4 (314-374)||(12577953-12578013)
chr4 (314-372)||(19604472-19604530)
chr4 (314-374)||(14572830-14572891)
chr4 (314-371)||(17673075-17673132)
chr4 (698-745)||(42898398-42898445)
chr4 (226-278)||(9537304-9537356)
[»] chr5 (21 HSPs)
chr5 (402-739)||(25100792-25101131)
chr5 (402-739)||(25159883-25160224)
chr5 (193-374)||(28665847-28666029)
chr5 (124-374)||(24658789-24659040)
chr5 (220-373)||(19052436-19052589)
chr5 (221-374)||(20314354-20314507)
chr5 (229-374)||(34131442-34131587)
chr5 (226-374)||(23388111-23388259)
chr5 (226-374)||(24321118-24321268)
chr5 (236-374)||(16522448-16522586)
chr5 (220-374)||(15199335-15199491)
chr5 (220-373)||(17433242-17433395)
chr5 (221-370)||(19007416-19007565)
chr5 (220-350)||(21914652-21914781)
chr5 (195-336)||(23338313-23338454)
chr5 (326-374)||(20859734-20859782)
chr5 (314-372)||(25401409-25401467)
chr5 (15-86)||(24658631-24658702)
chr5 (15-85)||(28666186-28666256)
chr5 (314-374)||(26121728-26121789)
chr5 (330-374)||(19762272-19762317)
[»] chr8 (38 HSPs)
chr8 (401-745)||(3188301-3188644)
chr8 (401-745)||(22634821-22635166)
chr8 (166-374)||(17510275-17510484)
chr8 (220-374)||(17100847-17101001)
chr8 (174-374)||(23868351-23868551)
chr8 (239-374)||(26887874-26888008)
chr8 (220-373)||(24109595-24109748)
chr8 (220-374)||(27660414-27660568)
chr8 (220-374)||(24112309-24112463)
chr8 (289-374)||(20399156-20399241)
chr8 (226-374)||(24389089-24389237)
chr8 (220-375)||(21315708-21315863)
chr8 (220-374)||(13313857-13314011)
chr8 (220-374)||(18447469-18447623)
chr8 (220-374)||(18569935-18570088)
chr8 (220-373)||(23890203-23890356)
chr8 (246-374)||(19265146-19265274)
chr8 (254-370)||(25227154-25227270)
chr8 (238-374)||(25233386-25233522)
chr8 (220-374)||(26139222-26139378)
chr8 (244-374)||(24722555-24722685)
chr8 (294-374)||(26830116-26830196)
chr8 (220-374)||(17997598-17997752)
chr8 (314-374)||(24583808-24583868)
chr8 (262-374)||(29381263-29381375)
chr8 (125-278)||(20399776-20399929)
chr8 (244-374)||(29761598-29761727)
chr8 (187-278)||(24388880-24388972)
chr8 (314-374)||(29766066-29766126)
chr8 (316-375)||(34498681-34498740)
chr8 (15-86)||(17510593-17510664)
chr8 (15-78)||(15176764-15176827)
chr8 (15-86)||(20400046-20400117)
chr8 (335-374)||(24520647-24520686)
chr8 (15-86)||(24722305-24722376)
chr8 (227-275)||(24520570-24520618)
chr8 (226-270)||(25181311-25181355)
chr8 (314-357)||(30832392-30832435)
[»] chr1 (36 HSPs)
chr1 (402-725)||(25922543-25922870)
chr1 (187-374)||(15542845-15543033)
chr1 (187-374)||(21333591-21333779)
chr1 (182-373)||(18826739-18826931)
chr1 (149-374)||(18528032-18528258)
chr1 (220-374)||(26611914-26612068)
chr1 (220-374)||(12209656-12209810)
chr1 (129-373)||(21665550-21665795)
chr1 (254-374)||(728548-728668)
chr1 (246-374)||(15159404-15159532)
chr1 (226-374)||(24055059-24055207)
chr1 (220-374)||(18735113-18735267)
chr1 (220-374)||(25402949-25403103)
chr1 (183-374)||(20107218-20107410)
chr1 (289-374)||(20147561-20147646)
chr1 (257-374)||(31234870-31234987)
chr1 (244-372)||(17609796-17609923)
chr1 (220-374)||(18831556-18831709)
chr1 (524-732)||(17240338-17240543)
chr1 (224-374)||(9402673-9402823)
chr1 (244-374)||(21983618-21983748)
chr1 (226-370)||(21450159-21450301)
chr1 (244-374)||(27545766-27545897)
chr1 (220-374)||(13267223-13267377)
chr1 (228-374)||(27972933-27973080)
chr1 (187-335)||(14781967-14782114)
chr1 (261-372)||(16180091-16180199)
chr1 (236-331)||(16915839-16915934)
chr1 (327-374)||(22623978-22624025)
chr1 (261-350)||(22624025-22624114)
chr1 (292-369)||(36016454-36016534)
chr1 (314-368)||(51470074-51470128)
chr1 (330-370)||(28009196-28009236)
chr1 (314-374)||(26021791-26021852)
chr1 (15-60)||(21333400-21333444)
chr1 (314-374)||(27116804-27116865)
[»] chr2 (24 HSPs)
chr2 (115-374)||(29143989-29144249)
chr2 (202-374)||(17629255-17629428)
chr2 (187-374)||(27907997-27908185)
chr2 (187-374)||(22378359-22378547)
chr2 (183-374)||(15340332-15340524)
chr2 (244-374)||(24089805-24089935)
chr2 (220-374)||(25536937-25537090)
chr2 (226-374)||(25921913-25922061)
chr2 (226-374)||(27540770-27540918)
chr2 (187-374)||(28929727-28929915)
chr2 (220-374)||(25531591-25531744)
chr2 (261-374)||(17674607-17674720)
chr2 (220-373)||(31803662-31803815)
chr2 (220-367)||(26659670-26659815)
chr2 (220-374)||(18121121-18121276)
chr2 (325-374)||(25886862-25886911)
chr2 (15-86)||(29144327-29144398)
chr2 (220-278)||(17350486-17350544)
chr2 (220-270)||(17199025-17199075)
chr2 (325-359)||(18122150-18122184)
chr2 (229-270)||(28766304-28766345)
chr2 (340-374)||(20171614-20171648)
chr2 (17-86)||(22378163-22378232)
chr2 (225-270)||(23010650-23010694)
[»] chr7 (36 HSPs)
chr7 (187-374)||(39271994-39272182)
chr7 (184-374)||(4450042-4450232)
chr7 (124-374)||(8052872-8053129)
chr7 (213-374)||(18362564-18362726)
chr7 (115-374)||(11804104-11804364)
chr7 (220-374)||(8977866-8978020)
chr7 (217-374)||(23297734-23297891)
chr7 (220-374)||(8318047-8318200)
chr7 (239-374)||(13263633-13263768)
chr7 (220-374)||(2565522-2565676)
chr7 (220-374)||(16057778-16057932)
chr7 (220-374)||(25692158-25692316)
chr7 (226-374)||(13756011-13756158)
chr7 (295-374)||(13278541-13278620)
chr7 (231-372)||(17190084-17190225)
chr7 (220-374)||(8878381-8878535)
chr7 (193-374)||(10611106-10611295)
chr7 (124-312)||(17078195-17078384)
chr7 (193-374)||(3586052-3586233)
chr7 (302-367)||(1862007-1862072)
chr7 (245-374)||(12330439-12330568)
chr7 (314-374)||(9134175-9134235)
chr7 (261-374)||(6043517-6043629)
chr7 (220-374)||(13288276-13288434)
chr7 (226-352)||(13253231-13253357)
chr7 (15-86)||(17078431-17078502)
chr7 (314-374)||(4820270-4820329)
chr7 (333-374)||(11505659-11505700)
chr7 (15-86)||(4450382-4450453)
chr7 (335-374)||(11505599-11505638)
chr7 (325-375)||(17830671-17830721)
chr7 (335-374)||(11505539-11505578)
chr7 (339-374)||(17078141-17078176)
chr7 (340-374)||(9977734-9977768)
chr7 (314-355)||(15870714-15870755)
chr7 (15-52)||(39270604-39270641)
[»] chr6 (36 HSPs)
chr6 (226-374)||(24469130-24469276)
chr6 (220-374)||(14078340-14078494)
chr6 (220-374)||(17383073-17383226)
chr6 (229-374)||(21846292-21846437)
chr6 (183-374)||(20004748-20004940)
chr6 (220-370)||(14077826-14077976)
chr6 (244-374)||(9519104-9519235)
chr6 (226-374)||(24479377-24479523)
chr6 (220-375)||(17822615-17822770)
chr6 (220-354)||(11193035-11193169)
chr6 (124-338)||(21840611-21840826)
chr6 (226-354)||(12988584-12988712)
chr6 (220-374)||(22849364-22849518)
chr6 (226-354)||(13021713-13021841)
chr6 (270-374)||(19578159-19578263)
chr6 (270-374)||(19594600-19594704)
chr6 (244-374)||(23007125-23007255)
chr6 (244-374)||(23781109-23781239)
chr6 (244-374)||(14638645-14638775)
chr6 (220-374)||(22411910-22412064)
chr6 (314-372)||(8066057-8066115)
chr6 (253-375)||(27123445-27123567)
chr6 (217-367)||(14075822-14075974)
chr6 (318-374)||(21153135-21153191)
chr6 (220-374)||(1636047-1636198)
chr6 (314-374)||(22409240-22409300)
chr6 (316-374)||(14723020-14723078)
chr6 (314-368)||(18074312-18074366)
chr6 (315-372)||(9840404-9840461)
chr6 (661-725)||(21862917-21862980)
chr6 (220-278)||(22404830-22404888)
chr6 (220-269)||(18074217-18074266)
chr6 (316-349)||(20144058-20144091)
chr6 (316-349)||(22188748-22188781)
chr6 (193-270)||(8066158-8066236)
chr6 (314-374)||(8038655-8038716)
[»] scaffold0032 (1 HSPs)
scaffold0032 (183-374)||(102213-102405)
[»] chr3 (39 HSPs)
chr3 (176-373)||(16244538-16244736)
chr3 (220-374)||(19575096-19575250)
chr3 (220-374)||(14977148-14977302)
chr3 (149-374)||(19170627-19170853)
chr3 (224-370)||(25851563-25851708)
chr3 (174-374)||(2166493-2166694)
chr3 (244-375)||(8171078-8171209)
chr3 (220-374)||(20022446-20022600)
chr3 (190-374)||(19910482-19910664)
chr3 (226-373)||(41509551-41509698)
chr3 (220-374)||(19533177-19533331)
chr3 (220-374)||(19909567-19909721)
chr3 (226-367)||(19169468-19169609)
chr3 (261-374)||(20121894-20122007)
chr3 (220-373)||(27413195-27413348)
chr3 (226-374)||(8882003-8882143)
chr3 (292-374)||(16228958-16229040)
chr3 (220-374)||(18457730-18457883)
chr3 (193-374)||(21302755-21302929)
chr3 (502-732)||(34157661-34157886)
chr3 (195-374)||(20430823-20431003)
chr3 (317-374)||(9780877-9780934)
chr3 (314-374)||(12372938-12372998)
chr3 (220-374)||(8115819-8115973)
chr3 (290-354)||(11636517-11636581)
chr3 (314-374)||(8144555-8144616)
chr3 (314-374)||(31284955-31285016)
chr3 (605-730)||(5153333-5153457)
chr3 (220-300)||(27073381-27073461)
chr3 (149-267)||(8144789-8144907)
chr3 (314-361)||(18735958-18736005)
chr3 (316-374)||(23699104-23699163)
chr3 (316-374)||(23717559-23717618)
chr3 (316-374)||(23736015-23736074)
chr3 (314-374)||(12771871-12771933)
chr3 (15-86)||(18747515-18747586)
chr3 (316-374)||(23755062-23755121)
chr3 (220-270)||(12372839-12372889)
chr3 (15-52)||(21303069-21303106)
[»] scaffold0263 (1 HSPs)
scaffold0263 (226-374)||(16635-16783)
[»] scaffold0016 (1 HSPs)
scaffold0016 (226-374)||(4209-4357)
[»] scaffold0056 (2 HSPs)
scaffold0056 (220-374)||(22353-22507)
scaffold0056 (244-374)||(53863-53993)
[»] scaffold0451 (1 HSPs)
scaffold0451 (220-374)||(5102-5256)
[»] scaffold0671 (1 HSPs)
scaffold0671 (226-373)||(2775-2921)
[»] scaffold0034 (1 HSPs)
scaffold0034 (232-374)||(81103-81244)
[»] scaffold0054 (1 HSPs)
scaffold0054 (226-374)||(73043-73190)
[»] scaffold0111 (2 HSPs)
scaffold0111 (292-374)||(11836-11918)
scaffold0111 (151-278)||(20979-21107)
[»] scaffold1156 (1 HSPs)
scaffold1156 (217-374)||(631-785)
[»] scaffold0005 (1 HSPs)
scaffold0005 (314-374)||(244485-244546)
[»] scaffold0002 (1 HSPs)
scaffold0002 (23-86)||(95317-95380)
[»] scaffold1339 (1 HSPs)
scaffold1339 (314-375)||(607-669)
[»] scaffold0043 (1 HSPs)
scaffold0043 (314-361)||(89138-89185)


Alignment Details
Target: chr4 (Bit Score: 276; Significance: 1e-154; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 8 - 374
Target Start/End: Complemental strand, 17711077 - 17710710
Alignment:
Q  8 agtgagatgaagacgaagacctaaaaacgacgaagataggagaaattggacccggaagcacacaagaatgcgcctagggaaaagtttaatgatgccatgc 107  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  17711077 agtgagttgaagacgaagacctaaaaacgacgaagatcggagaaattggacccggaagcacacaagaatgcgcctagggcaaagtttaatgatgccatgt 17710978  T
Q  108 gcatgtggcatatgtgatgcgccccaagcatctcaaaatgtaggggcgcaagcataactttattcctttttgttagtaaagcccacgtttttaacccaaa 207  Q
    || |  |||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||| |||||||||||||||    
T  17710977 gcctagggcatatgtgatgcaccccaagcatctcaaaatgtaggggcgcaggcgtaattttattcctttttgttggtaaagcccgcgtttttaacccaaa 17710878  T
Q  208 ccttgttataaatct-cattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgg 306  Q
     ||||||| |||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||| |||||    
T  17710877 gcttgttagaaatctccattataaatactagtcttcttcattcataatttctcgttcagaactgtggcagtttaagaggaaagctactttggagcttcgg 17710778  T
Q  307 gagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17710777 gagagaatctatcttctccttgattttctacggtatgtttttatctttagtaatttgtttttagttac 17710710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 401 - 746
Target Start/End: Complemental strand, 13667716 - 13667372
Alignment:
Q  401 aaaacgatttacaaaacaattccaaatttcctatgttaatgtaattcaaataactaatttattaatagttaaaaatggagaaaaa-tgtatcagcttcga 499  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||| ||||| |||||||||||| |    
T  13667716 aaaacgatttataaaacaattccaaatttcctatgttaatgtatttcaaataactaatttattaatagatgaaaatggaaaaaaaatgtatcagcttcaa 13667617  T
Q  500 acgaacaaaagtgaaacttgtgtgaagtttctagcggaagataacatgtctccacatttctaaacatactaaatagttcaaagcaacaattaaagaagca 599  Q
    | ||||||||||||||||||| | ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |     
T  13667616 aagaacaaaagtgaaacttgtttaaagttcctagcagaagataacatgtctccgcatttctaaacatactaaatagtttaaagcaacaattaaagaacc- 13667518  T
Q  600 aaaagaaaatccttatttcaaaatagatgacgaaaacccaatgtgattt-ccccgttcccgaacaagcatcaaccataaatcttacacatcttcttgtgt 698  Q
       | |||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  13667517 ---ataaaatccttatttcaaaatagatgacgaaaacccaaagtgatttcccccgttcgcgaacaagcatcaaccatgcatcttacacatcttcttgtgt 13667421  T
Q  699 acctaaaaatgttggtgtaagggg-tcagcttccaactacaataaaact 746  Q
    |||||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  13667420 acctaaaagtgttggtgtaaggggatcagcttccaaccacaacaaaact 13667372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 401 - 746
Target Start/End: Complemental strand, 13680573 - 13680229
Alignment:
Q  401 aaaacgatttacaaaacaattccaaatttcctatgttaatgtaattcaaataactaatttattaatagttaaaaatggagaaaaa-tgtatcagcttcga 499  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||| ||||| |||||||||||| |    
T  13680573 aaaacgatttataaaacaattccaaatttcctatgttaatgtatttcaaataactaatttattaatagatgaaaatggaaaaaaaatgtatcagcttcaa 13680474  T
Q  500 acgaacaaaagtgaaacttgtgtgaagtttctagcggaagataacatgtctccacatttctaaacatactaaatagttcaaagcaacaattaaagaagca 599  Q
    | ||||||||||||||||||| | ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |     
T  13680473 aagaacaaaagtgaaacttgtttaaagttcctagcagaagataacatgtctccgcatttctaaacatactaaatagtttaaagcaacaattaaagaacc- 13680375  T
Q  600 aaaagaaaatccttatttcaaaatagatgacgaaaacccaatgtgattt-ccccgttcccgaacaagcatcaaccataaatcttacacatcttcttgtgt 698  Q
       | |||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  13680374 ---ataaaatccttatttcaaaatagatgacgaaaacccaaagtgatttcccccgttcgcgaacaagcatcaaccatgcatcttacacatcttcttgtgt 13680278  T
Q  699 acctaaaaatgttggtgtaagggg-tcagcttccaactacaataaaact 746  Q
    |||||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  13680277 acctaaaagtgttggtgtaaggggatcagcttccaaccacaacaaaact 13680229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 226 - 374
Target Start/End: Original strand, 11252693 - 11252841
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | |||| || | ||| |  ||||||||| |||| |||||||||||||||||||    
T  11252693 tataaatactagccttcctcattcagaatttctcgttcagaactgtagtagttcaagaagaaggtgactttggagcttcgagagagaatctatcttctcc 11252792  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||    
T  11252793 ttaattttctagggtatgtgtttatctttagtaatttgtttttagttac 11252841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 166 - 350
Target Start/End: Complemental strand, 25095929 - 25095743
Alignment:
Q  166 tttattcctttttgttagtaaagcccacgtttttaacccaaaccttgttataaatct--cattataaatactagccttcttcattcagaatttctcgttc 263  Q
    ||||||| |||||||  ||  ||||| |||||||| ||||||||| |||| ||||||  || |||||||| |||||||| ||||||| ||||||||||||    
T  25095929 tttattcgtttttgtgggtttagcccgcgtttttagcccaaacctagttagaaatcttccactataaataatagccttcctcattcataatttctcgttc 25095830  T
Q  264 agaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttat 350  Q
    ||||||   |||||| || | ||| |||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  25095829 agaactaaagcagttcaagaggaaggctactttggagcttctggagagaatatatcttctccttgattttctagggtatgtttttat 25095743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 251 - 374
Target Start/End: Complemental strand, 22171266 - 22171143
Alignment:
Q  251 gaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttat 350  Q
    ||||||||||||||||||| |||||||| || | ||| || ||||||||| ||| ||||||  | |||||||||||||||||||||||||||||||||||    
T  22171266 gaatttctcgttcagaactatggcagttcaagaggaaggcaactttggagcttcaggagagtttttatcttctccttgattttctagggtatgtttttat 22171167  T
Q  351 ctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||    
T  22171166 ctttagtaatttgtttttagttac 22171143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 7583536 - 7583382
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| |||||||| |||||||| |||||||||| |||||||||||||| |||  |||| || | ||| |  ||||||||| |||  ||||   ||||||    
T  7583536 tctcactataaataatagccttcatcattcagaaattctcgttcagaacggtgatagttcaagaggaagggaactttggagcttcaagagaatttctatc 7583437  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7583436 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 7583382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 15165995 - 15165841
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||||||| |||  |||||  |||||||||||||||| ||||| |||| || | ||| ||  |||||||| ||||||||||  ||||||    
T  15165995 tctcactataaatactagctttcaccattccaaatttctcgttcagaattgtggaagttcaagaggaaggcacctttggagcttcgggagagtttctatc 15165896  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15165895 ttctctttgattttctagggtatgtttttatttttagtaatttgtttttagttac 15165841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 173 - 374
Target Start/End: Original strand, 8968564 - 8968768
Alignment:
Q  173 ctttttgttagtaaagcccacgtttttaacccaaaccttgttataaa---tctcattataaatactagccttcttcattcagaatttctcgttcagaact 269  Q
    ||||||||  ||||||||  |||||||| |||||||   ||||||||   ||||| ||||||||| ||||||| ||||||||||||||||||| ||||      
T  8968564 ctttttgtgggtaaagcctgcgtttttagcccaaactcagttataaactctctcactataaataccagccttcctcattcagaatttctcgtttagaagc 8968663  T
Q  270 gtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgttttta 369  Q
    ||||||||| || | ||| || | | | ||| |||||  |||  |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  8968664 gtggcagttcaaaaggaaggcaattctagagcttcggaggagtttctatcttctccatgattttctagggtatgtttttttctttagtaatttgttttta 8968763  T
Q  370 gttac 374  Q
    |||||    
T  8968764 gttac 8968768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 17108206 - 17108055
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| |||||||| ||| |||| ||||||||||   ||||||||||||||| | |||| || | ||| || ||||||||| |||  |||||  ||||||    
T  17108206 tctcactataaatattagtcttcctcattcagaa---ctcgttcagaactgttgtagttcaagaggaaggcaactttggagcttcatgagagtttctatc 17108110  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17108109 ttctccttgattttctagggtatgtttttatctttagtaatatgtttttagttac 17108055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 195 - 374
Target Start/End: Complemental strand, 16730837 - 16730657
Alignment:
Q  195 tttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctac 293  Q
    |||||| ||||||||  |||| ||| |||||  |||||||| ||| ||| |||| |||||||||||||||||||||||||||||| || | ||| || |     
T  16730837 tttttagcccaaacccagttagaaactctcacaataaatacaagctttcctcatccagaatttctcgttcagaactgtggcagttcaagaggaaggcaat 16730738  T
Q  294 tttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    | | ||| |||||  |||  | |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  16730737 tctagagcttcggaggagtttatatcttctccttgattttctagggtatgttttaatctttaataatttgtttttagttac 16730657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 226 - 377
Target Start/End: Complemental strand, 37741143 - 37740992
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaag-ctactttggagtttcgggagagaatctatcttctc 324  Q
    ||||||||| ||||||  ||||||||| ||||||||||| |||||  |||||| || | | ||| ||||||||||| || ||||||||||||||||||||    
T  37741143 tataaataccagcctttctcattcaga-tttctcgttcaaaactgaagcagttcaagagggaaggctactttggagctttgggagagaatctatcttctc 37741045  T
Q  325 cttgattttctagggtatgtttttatctttagtaatttgtttttagttactgt 377  Q
    | | ||||||||||||||||||||||||||  ||  |||||||||||||||||    
T  37741044 ccttattttctagggtatgtttttatcttttatatcttgtttttagttactgt 37740992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 173 - 374
Target Start/End: Original strand, 17335863 - 17336065
Alignment:
Q  173 ctttttgttagtaaagcccacgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgt 271  Q
    ||||||||  ||||||||  ||||| || ||||||||  |||| ||| ||||| ||||||||  ||||||| ||||| |||| ||||||||||||||| |    
T  17335863 ctttttgtgggtaaagccggcgtttatagcccaaacccagttagaaactctcactataaatatcagccttcctcatttagaaattctcgttcagaacttt 17335962  T
Q  272 ggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagt 371  Q
    |||| || || | |||  | | | | ||| ||| |  |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17335963 ggcatttcaagaggaagacaattctagagcttcagaggagtttctatcttctcattgattttctagggtatgtttttatctttagtaatttgtttttagt 17336062  T
Q  372 tac 374  Q
    |||    
T  17336063 tac 17336065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 314 - 373
Target Start/End: Complemental strand, 11781985 - 11781926
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtta 373  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11781985 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtta 11781926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 17025299 - 17025372
Alignment:
Q  294 tttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttt 367  Q
    ||||||| ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17025299 tttggagcttcgggagagtttctatcttctccttgattttctagagtatgtttttatctttagtaatttgtttt 17025372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 314 - 374
Target Start/End: Complemental strand, 10105727 - 10105667
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10105727 tctatcctctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 10105667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 246 - 370
Target Start/End: Original strand, 19557085 - 19557209
Alignment:
Q  246 attcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtt 345  Q
    ||||||||||| ||||||||||||||||||| | || | ||  || ||||||||  ||| ||||||  ||||||||||| ||||||||||| ||||||||    
T  19557085 attcagaatttatcgttcagaactgtggcagatcaagaagatggcaactttggaccttcaggagagtttctatcttctctttgattttctatggtatgtt 19557184  T
Q  346 tttatctttagtaatttgtttttag 370  Q
    ||||||||  |||||||||||||||    
T  19557185 tttatcttcggtaatttgtttttag 19557209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 17218057 - 17217946
Alignment:
Q  261 ttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaat 360  Q
    ||||||||| |||||||| || | |||  |||||||| || ||||||| |  |||||||||||||||||||||||| | ||||||||||||||||  |||    
T  17218057 ttcagaactatggcagttcaagaggaagactactttgaagcttcgggaaa--atctatcttctccttgattttctaagctatgtttttatctttatgaat 17217960  T
Q  361 ttgtttttagttac 374  Q
    ||||||||||||||    
T  17217959 ttgtttttagttac 17217946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 12577953 - 12578013
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||    
T  12577953 tctatcttctccatgtttttctagggtatgtttttatctttagtaatttgtttttaattac 12578013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 314 - 372
Target Start/End: Original strand, 19604472 - 19604530
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtt 372  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||||||| |||||||||    
T  19604472 tctatcttctccttatttttctagggtatctttttatctttagtaatttctttttagtt 19604530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 374
Target Start/End: Complemental strand, 14572891 - 14572830
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatc-tttagtaatttgtttttagttac 374  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||||||||| |||||||||    
T  14572891 tctatcttctccttgtttttctagtgtatgtttttatcttttagtaatttgtgtttagttac 14572830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 17673132 - 17673075
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagt 371  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||||||||| ||||||    
T  17673132 tctatcttctccttgtttttatagggtatggttttatctttagtaatttgtctttagt 17673075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 698 - 745
Target Start/End: Original strand, 42898398 - 42898445
Alignment:
Q  698 tacctaaaaatgttggtgtaaggggtcagcttccaactacaataaaac 745  Q
    |||||||||||||||||||||||| |||||||||||| |||| |||||    
T  42898398 tacctaaaaatgttggtgtaagggatcagcttccaaccacaacaaaac 42898445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 9537304 - 9537356
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtt 278  Q
    ||||||||||||||||| ||||||| ||||| |||||| |||||||| |||||    
T  9537304 tataaatactagccttcctcattcataatttttcgttccgaactgtgacagtt 9537356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 272; Significance: 1e-151; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 402 - 739
Target Start/End: Original strand, 25100792 - 25101131
Alignment:
Q  402 aaacgatttacaaaacaattccaaatttcctatgttaatgtaattcaaataactaatttattaatagttaaaaatggagaaaaatgtatcagcttcgaac 501  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  25100792 aaacgatttacaaaacaatttcaaatttcctatgttaatgtaattcaaataactaatttattaatagttaaaaatgaagaaaaatgtatcagcttcgaaa 25100891  T
Q  502 gaacaaaagtgaaacttgtgtgaagtttctagcggaagataacatgtctccacatttctaaacatactaaatagttcaaagcaacaattaaagaa-gcaa 600  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   ||    
T  25100892 gaacaaaagtgaaacttgtttaaagtttctagcggaagataacatgtctccgcatttctaaacatactaaatagttcaaagcaacaattaaagaacaaaa 25100991  T
Q  601 aaagaaaatccttatttcaaaatagatgacgaaaacccaatgtgatttcccc-gttcccgaacaagcatcaaccataaatcttacacatcttcttgtgta 699  Q
    ||| |||||||||||||||||||||||||||||||||| | ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  25100992 aaaaaaaatccttatttcaaaatagatgacgaaaacccgaagtgatttcccctgttcgcgaacaagcatcaaccataaatcttacacatcttcttgtgta 25101091  T
Q  700 cctaaaaatgttggtgtaaggggtcagcttccaactacaa 739  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  25101092 cctaaaaatgttggtgtaaggggtcagcttccaaccacaa 25101131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 402 - 739
Target Start/End: Original strand, 25159883 - 25160224
Alignment:
Q  402 aaacgatttacaaaacaattccaaatttcctatgttaatgtaattcaaataactaatttattaatagttaaaaatggagaaaaatgtatcagcttcgaac 501  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  25159883 aaacgatttacaaaacaatttcaaatttcctatgttaatgtaattcaaataactaatttattaatagttaaaaatgaagaaaaatgtatcagcttcgaaa 25159982  T
Q  502 gaacaaaagtgaaacttgtgtgaagtttctagcggaagataacatgtctccacatttctaaacatactaaatagttcaaagcaacaattaaagaagcaaa 601  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||    
T  25159983 gaacaaaagtgaaacttgtttaaagtttctagcggaagataacatgtctccgcatttctaaacatactaaatagttcaaagcaacaattaaagaacaaaa 25160082  T
Q  602 aagaaaa---tccttatttcaaaatagatgacgaaaacccaatgtgatttcccc-gttcccgaacaagcatcaaccataaatcttacacatcttcttgtg 697  Q
    || ||||    ||||||||||||||||||||||||||||| | ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  25160083 aaaaaaaaataccttatttcaaaatagatgacgaaaacccgaagtgatttcccctgttcgcgaacaagcatcaaccataaatcttacacatcttcttgtg 25160182  T
Q  698 tacctaaaaatgttggtgtaaggggtcagcttccaactacaa 739  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  25160183 tacctaaaaatgttggtgtaaggggtcagcttccaaccacaa 25160224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 193 - 374
Target Start/End: Complemental strand, 28666029 - 28665847
Alignment:
Q  193 cgtttttaacccaaaccttgttataaatctc-attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagct 291  Q
    |||||||| |||||||||||||| ||||||| | |||||||||||| |||| ||||| |||||||||| ||||||||||| |||||| || | ||| ||     
T  28666029 cgtttttagcccaaaccttgttagaaatctccactataaatactagtcttcctcatttagaatttctcattcagaactgtagcagttcaagaggaaggcg 28665930  T
Q  292 actttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28665929 actttgcagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgattttagttac 28665847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 124 - 374
Target Start/End: Original strand, 24658789 - 24659040
Alignment:
Q  124 atgcgccccaagcatctcaaaatgtaggggcgcaagcataactttattcctttttgttagtaaagcccacgtttttaacccaaaccttgttataaatctc 223  Q
    |||||||||||||||||||||||| ||||||||| || ||| ||||||| |||||    ||  ||||| ||||||||  |||||||  ||||||||||||    
T  24658789 atgcgccccaagcatctcaaaatgcaggggcgcaggcgtaattttattcatttttcggggtttagcccgcgtttttagtccaaacccagttataaatctc 24658888  T
Q  224 at-tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttc 322  Q
    |  |||||||| |||||||| ||||||||||||||| ||||||||||||| ||||| || | ||| |||| ||||||| ||||||||| ||||| |||||    
T  24658889 aactataaataatagccttcctcattcagaatttcttgttcagaactgtgacagttcaagaggaaggctagtttggagcttcgggagataatctttcttc 24658988  T
Q  323 tccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    | |||||||||||||||||||||||| | ||| ||||||| |||||||||||    
T  24658989 ttcttgattttctagggtatgtttttcttttttgtaatttatttttagttac 24659040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 220 - 373
Target Start/End: Complemental strand, 19052589 - 19052436
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||  | | ||| || ||||||||| ||| ||||||  || |||    
T  19052589 tctcactataaatactagccttcctcatttagaatttctcgtttagaactgtggcagttcgagaggaatgcaactttggagcttcaggagagtttcaatc 19052490  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtta 373  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19052489 ttctccttgattttctagggtttgtttttatctttagtaatttgtttttagtta 19052436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 221 - 374
Target Start/End: Original strand, 20314354 - 20314507
Alignment:
Q  221 ctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatct 320  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||||||| || | ||| || ||||||||| ||| ||||||  | |||||    
T  20314354 ctcatcataaataccagcattcctcattcagaatttctcgttcagaactgtggcagttcaagaggaatgcgactttggagcttcaggagagtttttatct 20314453  T
Q  321 tctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  20314454 tctccttgattttctagggtatgttttgatctttagtaatttttttttagttac 20314507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 229 - 374
Target Start/End: Complemental strand, 34131587 - 34131442
Alignment:
Q  229 aaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttg 328  Q
    |||||| ||||||| ||||| |||||||||||||||||| ||||||| || || | ||| || ||||||||| ||||||||||  |||||||||||||||    
T  34131587 aaataccagccttcctcatttagaatttctcgttcagaattgtggcaattcaagaggaaggcaactttggagcttcgggagagtttctatcttctccttg 34131488  T
Q  329 attttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  34131487 attttctagggtatgtttttatctttagtaatttgtttttaattac 34131442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 226 - 374
Target Start/End: Original strand, 23388111 - 23388259
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||||||||||| ||||||| ||||||| |||||| ||||  |||||| || | | | ||||||||||||  ||||| |||||||||| ||||||    
T  23388111 tataaatactagccttcctcattcacaatttcttgttcaggactgaagcagttcaagaggtaggctactttggagcatcgggcgagaatctattttctcc 23388210  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23388211 ttgattttctagggtatgtttttatctttagtagtttgtttttagttac 23388259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 226 - 374
Target Start/End: Original strand, 24321118 - 24321268
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggag-tttcgggagagaatctatcttctc 324  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||| ||| || |||||||||  |||||||  ||||||||||||||    
T  24321118 tataaatactagccttcctcattcagaatttcttgttcagaactgtggcagttcaataggaaggcaactttggagcgttcgggatggaatctatcttctc 24321217  T
Q  325 cttgattttctagggta-tgttttta-tctttagtaatttgtttttagttac 374  Q
    ||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  24321218 ctt-attttctagggtattgtttttattctttagtaatttgtttttagttac 24321268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 236 - 374
Target Start/End: Original strand, 16522448 - 16522586
Alignment:
Q  236 agccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttct 335  Q
    ||||||| |||||||||| |||||| |||||||||  |||||| || | ||| |  ||||||||| ||||||||||  |||| |||||||||||||||||    
T  16522448 agccttcctcattcagaacttctcgatcagaactggagcagttcaagaggaaggaaactttggagcttcgggagagtttctaccttctccttgattttct 16522547  T
Q  336 agggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16522548 agggtatgtttttatctttagtaatttgtttttagttac 16522586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 15199335 - 15199491
Alignment:
Q  220 tctcattataaatactagcctt-cttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctat 318  Q
    ||||| ||| |||||||||||| | ||||| ||||||||||||||| ||||||||||||| || | ||| || ||||||||| ||||||||||  || ||    
T  15199335 tctcactatgaatactagcctttcctcatttagaatttctcgttcaaaactgtggcagttcaagaggaatgcaactttggagcttcgggagagtttcaat 15199434  T
Q  319 cttctccttgattttctagggtatg-tttttatctttagtaatttgtttttagttac 374  Q
    | |||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  15199435 catctccttgattttctaggatatgttttttatctttagtaatttgtttttagttac 15199491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 220 - 373
Target Start/End: Complemental strand, 17433395 - 17433242
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| |||||||| |||||||| ||||||| || ||||| || |||| ||||| |||| || | | | ||||||||| || ||| ||| ||  ||||||    
T  17433395 tctcactataaatattagccttcctcattcataaattctcatttagaattgtggtagttcaagaggtaggctactttgaagcttctggaaagtttctatc 17433296  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtta 373  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  17433295 ttctccttgattttctagggtaagattttatctttagtaatttgtttttagtta 17433242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 221 - 370
Target Start/End: Original strand, 19007416 - 19007565
Alignment:
Q  221 ctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatct 320  Q
    |||| ||||||||| ||||||| |||||||||||||| ||||||||||||  |||||| || | |||  |  |||||||| ||   |||||  |||||||    
T  19007416 ctcactataaataccagccttcctcattcagaatttcccgttcagaactgaagcagttcaagaggaagtcggctttggagcttaaagagagtttctatct 19007515  T
Q  321 tctccttgattttctagggtatgtttttatctttagtaatttgtttttag 370  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  19007516 tctccttgattttctagggtatgtttttatttttaataatttgtttttag 19007565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 220 - 350
Target Start/End: Original strand, 21914652 - 21914781
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||| ||||| | ||||| ||||||| ||||||||||||| |||||  |||||| || | ||| |||||||||||| |||||||||||||||||     
T  21914652 tctcactatgaataccaaccttcctcattcaaaatttctcgttca-aactgaagcagttcaagaggaaggctactttggagattcgggagagaatctatt 21914750  T
Q  320 ttctccttgattttctagggtatgtttttat 350  Q
    ||| |||  ||||||||||||||||||||||    
T  21914751 ttcgcctcaattttctagggtatgtttttat 21914781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 195 - 336
Target Start/End: Complemental strand, 23338454 - 23338313
Alignment:
Q  195 tttttaacccaaaccttgttataaatctc-attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctac 293  Q
    |||||| ||||||||  |||| ||||||| | ||||||||| ||||||  |||||||||||||||||||||||||| |||||||| || | ||| || ||    
T  23338454 tttttagcccaaacccagttagaaatctccactataaataccagccttactcattcagaatttctcgttcagaactttggcagttcaagaggaaggcaac 23338355  T
Q  294 tttggagtttcgggagagaatctatcttctccttgattttcta 336  Q
    ||||||| ||| |||||   |||| ||||||||||||||||||    
T  23338354 tttggagcttcaggagattttcta-cttctccttgattttcta 23338313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 326 - 374
Target Start/End: Complemental strand, 20859782 - 20859734
Alignment:
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20859782 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 20859734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 314 - 372
Target Start/End: Original strand, 25401409 - 25401467
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtt 372  Q
    ||||| |||||| ||||||||| |||||| |||||||||||||||||||||||||||||    
T  25401409 tctatattctccgtgattttcttgggtatatttttatctttagtaatttgtttttagtt 25401467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 24658631 - 24658702
Alignment:
Q  15 tgaagacgaagacctaaaaacgacgaagataggagaaattggacccggaagcacacaagaatgcgcctaggg 86  Q
    ||||||||||||||||||||||||||||||  ||||||||||  ||| |||||||    |||||||||||||    
T  24658631 tgaagacgaagacctaaaaacgacgaagatcagagaaattgggtccgaaagcacaatcaaatgcgcctaggg 24658702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 28666256 - 28666186
Alignment:
Q  15 tgaagacgaagacctaaaaacgacgaagataggagaaattggacccggaagcacacaagaatgcgcctagg 85  Q
    |||||||||| |||||||||||| |||||| | ||||||||| | |||||||||| || ||| ||||||||    
T  28666256 tgaagacgaaaacctaaaaacgatgaagatcgaagaaattgggcgcggaagcacaaaaaaatccgcctagg 28666186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 314 - 374
Target Start/End: Complemental strand, 26121789 - 26121728
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatc-tttagtaatttgtttttagttac 374  Q
    ||||||||||||||| ||||||  |||||||||||||| ||| ||||||||| |||||||||    
T  26121789 tctatcttctccttgtttttctcaggtatgtttttatctttttgtaatttgtctttagttac 26121728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 374
Target Start/End: Original strand, 19762272 - 19762317
Alignment:
Q  330 ttttctagggtatgtttt-tatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||| | ||||| |||||||||||||||||||    
T  19762272 ttttctagggtatgttttatttcttttgtaatttgtttttagttac 19762317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 270; Significance: 1e-150; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 401 - 745
Target Start/End: Original strand, 3188301 - 3188644
Alignment:
Q  401 aaaacgatttacaaaacaattccaaatttcctatgttaatgtaattcaaataactaatttattaatagttaaaaatggagaaaaatgtatcagcttcgaa 500  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  3188301 aaaacgatttacaaaataattccaaatttcctatgttaatgtaattcaaataactaatttattaatagt-aaaaatggagaaaaatgcatcagcttcgaa 3188399  T
Q  501 cgaacaaaagtgaaacttgtgtgaagtttctagcggaagataacatgtctccacatttctaaacatactaaatagttcaaagcaacaattaaagaagcaa 600  Q
     ||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3188400 agaacaaaagtgaaacttgtttaaagtttctagcagaagataacatgtctccacatttctaaacatactaaatagttcaaagcaacaattaaagaaccaa 3188499  T
Q  601 aaagaaaatccttatttcaaaatagatgacgaaaacccaatgtga-tttccccgttcccgaacaagcatcaaccataaatcttacacatcttcttgtgta 699  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||  ||||||||||||||||||||||||||||||||||||||||||    
T  3188500 aaagaaaatccttatttcaaaatagatgacgaaaacccaaagtgattttccccattagcgaacaagcatcaaccataaatcttacacatcttcttgtgta 3188599  T
Q  700 cctaaaaatgttggtgtaaggggtcagcttccaactacaataaaac 745  Q
    ||| ||||||||||||||||||||||||||||||| |||| |||||    
T  3188600 cct-aaaatgttggtgtaaggggtcagcttccaaccacaacaaaac 3188644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 401 - 745
Target Start/End: Original strand, 22634821 - 22635166
Alignment:
Q  401 aaaacgatttacaaaacaattccaaatttcctatgttaatgtaattcaaataactaatttattaatagttaaaaatggagaaaaatgtatcagcttcgaa 500  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22634821 aaaacgattcacaaaacaattccaaatttcctatgttaatgtaattcaaataactaatttattaatagttaaaaatggagaaaaatgtatcagcttcgaa 22634920  T
Q  501 cgaacaaaagtgaaacttgtgtgaagtttctagcggaagataacatgtctccacatttctaaacatactaaatagttcaaagcaacaattaaagaagcaa 600  Q
     ||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22634921 agaacaaaagtgaaacttgtttaaagtttctagcggaagataacatgtctccgcatttctaaacatactaaatagttcaaagcaacaattaaagaagcaa 22635020  T
Q  601 aaagaaaatcctta-tttcaaaatagatgacgaaaacccaatgtgattt-ccccgttcccgaacaagcatcaaccataaatcttacacatcttcttgtgt 698  Q
    ||||||||| |||| ||||||||||||||||||||||| || ||||||| ||||| || ||||||||||||||||||||||| ||||||| |||||||||    
T  22635021 aaagaaaattcttattttcaaaatagatgacgaaaacctaaagtgatttcccccggtcgcgaacaagcatcaaccataaatcgtacacat-ttcttgtgt 22635119  T
Q  699 acctaaaaatgttggtgtaaggggtcagcttccaactacaataaaac 745  Q
    ||||||||||||||||||||||||||||||| |||| |||| |||||    
T  22635120 acctaaaaatgttggtgtaaggggtcagctttcaaccacaacaaaac 22635166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 166 - 374
Target Start/End: Complemental strand, 17510484 - 17510275
Alignment:
Q  166 tttattcctttttgttagtaaagcccacgtttttaacccaaaccttgttataaatctc-attataaatactagccttcttcattcagaatttctcgttca 264  Q
    ||||||| ||| |||  |||||||||||||||||| |||||| |   ||| ||||||| | ||||||||| || | || |||||||||| || |||||||    
T  17510484 tttattcgtttgtgtgtgtaaagcccacgtttttagcccaaatccaattaaaaatctccactataaataccagtcatcctcattcagaaattttcgttca 17510385  T
Q  265 gaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgt 364  Q
    ||||||||| |||| |||| ||| | | |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510384 gaactgtggaagttcaataggaaggattctttggaacttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgt 17510285  T
Q  365 ttttagttac 374  Q
    ||||||||||    
T  17510284 ttttagttac 17510275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 17100847 - 17101001
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||||||||||||| | ||||| |||||||||| |||||||||||||||||||||||| || | ||| ||||||||| || ||||||||||  || |||    
T  17100847 tctcattataaataccaaccttcctcattcagaaattctcgttcagaactgtggcagttcaagaggaaggctactttgaagcttcgggagagtttcaatc 17100946  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  17100947 ttctccttgattttctaaggtatctttttatctttagtaatttgtttttagttac 17101001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 174 - 374
Target Start/End: Original strand, 23868351 - 23868551
Alignment:
Q  174 tttttgttagtaaagcccacgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtg 272  Q
    |||||||  ||||||||| |||||||| || |||||  |||| ||| ||||| ||||||||||||| ||| ||||||||||||| ||||||| |||||||    
T  23868351 tttttgtgggtaaagcccgcgtttttagcctaaacccagttagaaactctcactataaatactagc-ttcctcattcagaatttttcgttcaaaactgtg 23868449  T
Q  273 gcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtt 372  Q
    ||| ||  ||| ||| || ||||||||  ||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23868450 gcaattctataggaaggcaactttggaacttcgggagagtttctatcttctccttgattttccagggtatgtttttatctttagtaatttgtttttagtt 23868549  T
Q  373 ac 374  Q
    ||    
T  23868550 ac 23868551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 239 - 374
Target Start/End: Complemental strand, 26888008 - 26887874
Alignment:
Q  239 cttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagg 338  Q
    |||| ||||||||||||||||||||||||||||||||||| || | ||| || ||||||||| ||| ||||||  |||||||||||||||||||||||||    
T  26888008 cttcctcattcagaatttctcgttcagaactgtggcagttcaagaggaaggcaactttggagcttcaggagagtttctatcttctccttgattttctagg 26887909  T
Q  339 gtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||| ||||||||||||||||||||||||||||||    
T  26887908 gtatg-ttttatctttagtaatttgtttttagttac 26887874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 220 - 373
Target Start/End: Original strand, 24109595 - 24109748
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| | ||||| |||||||||||||||||||| ||||||||||| || || |  ||||| ||||||||| ||| ||||||  ||||||    
T  24109595 tctcactataaataccatccttcctcattcagaatttctcgttcggaactgtggcaattcaagagtaaagcaactttggagcttcaggagagtttctatc 24109694  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtta 373  Q
    |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||    
T  24109695 ttctccttgattttctcgggtatgtttttatctttaataatttatttttagtta 24109748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 27660568 - 27660414
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||| || | ||| || ||||||||| ||| ||||||  ||||||    
T  27660568 tctcactataaatactagccttcctcattcagaatttctcgttcagaactgtgatagttcaagaggaaggcaactttggagcttcaggagagtttctatc 27660469  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||| |||||||||| ||||  |||||| ||||||||||| |||||||||||    
T  27660468 ttctcctcgattttctagagtatcgttttatatttagtaatttatttttagttac 27660414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 24112309 - 24112463
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||||||| || | |||  | ||||| ||| ||  | ||||  | ||||    
T  24112309 tctcactataaataccaaccttcctcattcagaatttctcgttcagaactgtggcagttcaagaggaagacaactttagagctttagaagagtttttatc 24112408  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  24112409 ttctccttgattttctagggtatgcttttatctttggtaatttgtttttagttac 24112463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 20399241 - 20399156
Alignment:
Q  289 gctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  20399241 gctactttggagcttcgggagagaatctatcttctccttgattatctagggtatgtttttgtctttagtaatttgtttttagttac 20399156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 226 - 374
Target Start/End: Complemental strand, 24389237 - 24389089
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||||||  ||  ||||| | ||||||||||||||||||||| ||||| || | ||| || |||| |||| ||| ||||||  ||||||||||||    
T  24389237 tataaatactagtttttctcatttataatttctcgttcagaactgtgacagttcaagaggaaggcaacttcggagcttctggagagtttctatcttctcc 24389138  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  24389137 ttgattttttagggtatgtttttatctttagtaatttttttttagttac 24389089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 220 - 375
Target Start/End: Complemental strand, 21315863 - 21315708
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| | ||||| ||||| | |||||| |||||||||||||||||||| || | ||| || | |||  || |||||  |||  ||||||    
T  21315863 tctcactataaataccatccttcctcattaaaaatttcgcgttcagaactgtggcagttcaagaggaaggcaattttatagcttcggaggagtttctatc 21315764  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttact 375  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21315763 ttctccttgattttctagggtatgtttttatctttagtaatttttttttagttact 21315708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 13313857 - 13314011
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||||||||||| ||||| | | ||| || |||||||||||| ||||| |  | ||| || |||||| || ||  ||||||| | ||||    
T  13313857 tctcactataaatactagccttcctcatttaaattttttcattcagaactgtgtcagttcatgaggaaggcaactttgaagctttaggagagattttatc 13313956  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13313957 ttctccttgattttctagggtatgattttatctttagtaatttgtttttagttac 13314011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 18447469 - 18447623
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| | ||||| |||||||||||||||| |||||||||||||||||| || | ||| || ||||||||| ||| | ||||  | ||||    
T  18447469 tctcactataaataccatccttcctcattcagaatttctcattcagaactgtggcagttcaagaggaaggcaactttggagcttcagtagagtttatatc 18447568  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||| |||||||| |||| ||| | |||||||||||||||||||||||||||||    
T  18447569 ttctcattgattttttaggttatctctttatctttagtaatttgtttttagttac 18447623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 18570088 - 18569935
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| | ||||| ||||||||||||||||||| |||||||   ||||| ||  |||| || ||||||||| |||| |||||  ||||||    
T  18570088 tctcactataaataccaaccttcatcattcagaatttctcgtttagaactggaccagttcaag-tgaaggcaactttggagcttcgagagagtttctatc 18569990  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  18569989 ttctccttgattttctaggatatgtttttatctttagtagcttgtttttagttac 18569935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 220 - 373
Target Start/End: Original strand, 23890203 - 23890356
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||  || |||| ||||||| |||| ||||||||||| |||||||||| || | ||| || ||||||||| ||| || |||  | ||||    
T  23890203 tctcactataaatatcagtcttcctcattcaaaattgctcgttcagaattgtggcagttcaagaggaaggcaactttggagcttcaggggagtttatatc 23890302  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtta 373  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  23890303 ttctccttgattttctaaggtatgtttttatctatagtaatttgtttttagtta 23890356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 246 - 374
Target Start/End: Complemental strand, 19265274 - 19265146
Alignment:
Q  246 attcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtt 345  Q
    ||||| ||||||||||||||||||||||||||| || | ||| ||  |||||||| |||  || ||  |||||||||| |||||||||||||||||||||    
T  19265274 attcaaaatttctcgttcagaactgtggcagttcaagaggaaggcagctttggagcttcaagatagtttctatcttcttcttgattttctagggtatgtt 19265175  T
Q  346 tttatctttagtaatttgtttttagttac 374  Q
    ||||||||| |||||||||||||||||||    
T  19265174 tttatcttttgtaatttgtttttagttac 19265146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 254 - 370
Target Start/End: Complemental strand, 25227270 - 25227154
Alignment:
Q  254 tttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctt 353  Q
    |||| ||||||||||||||| ||| ||| | ||| || ||||||||| ||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  25227270 tttcacgttcagaactgtggtagtgtaagaggaaggcaactttggagcttcaggagagtttctatcttctccttgattttctagggtatgtttttatctt 25227171  T
Q  354 tagtaatttgtttttag 370  Q
    |||||||||||| ||||    
T  25227170 tagtaatttgttattag 25227154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 238 - 374
Target Start/End: Complemental strand, 25233522 - 25233386
Alignment:
Q  238 ccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctag 337  Q
    ||||| ||||| |||| ||||||||||||||| || ||||| || | |||    ||||||||| || |||||||  ||||||||||||||||||||||||    
T  25233522 ccttcctcatttagaaattctcgttcagaactatgacagttcaagaggaagaaaactttggagctttgggagagtttctatcttctccttgattttctag 25233423  T
Q  338 ggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||| ||||||||||    
T  25233422 ggtatgtttttatctttagtaatttgcttttagttac 25233386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 26139378 - 26139222
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||| ||||| ||||||| |||||||||||||||||||||||||||  |||||| || | |||  | ||||||||| ||| ||||||  ||||||    
T  26139378 tctcactatgaataccagccttcctcattcagaatttctcgttcagaactggagcagttcaagaggaagacaactttggagcttcaggagagtttctatc 26139279  T
Q  320 ttctccttga-ttttctagggta-tgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||| |||| | ||||| |||||||||||||||||||||||||||||||||    
T  26139278 ttctccttgatttttatggggtattgtttttatctttagtaatttgtttttagttac 26139222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 244 - 374
Target Start/End: Original strand, 24722555 - 24722685
Alignment:
Q  244 tcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatg 343  Q
    ||||||| |||||||||||||    ||||| | || || | ||| |||||||||||| |||| ||||||||||||| ||||| ||| |||||||||||||    
T  24722555 tcattcataatttctcgttcaattttgtggtaattcaagaggaaggctactttggagcttcgagagagaatctatcctctccatgactttctagggtatg 24722654  T
Q  344 tttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||    
T  24722655 tttttatctttagtaatttgtttttagttac 24722685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 26830116 - 26830196
Alignment:
Q  294 tttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  26830116 tttggagcttcgggagagtttctatcttctccttgattttctagggtatgtttttatctttagtatcttgtttttagttac 26830196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 17997752 - 17997598
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| ||||||| ||||||| ||||| | ||||||||| || |||  | || | ||| |  ||||||||| ||| ||||||  |||| |    
T  17997752 tctcactataaataccagccttcctcattcataatttattgttcagaacggtagcaaatcaagaggaaggtgactttggagcttcaggagagtttctacc 17997653  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||  |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17997652 ttaaccttgattttctagggtatgtttttatctttactaatttgtttttagttac 17997598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 24583808 - 24583868
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24583808 tctatcttctccttgatcttctagggtatgtttttatctttagtaatttgtttttagttac 24583868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 29381263 - 29381375
Alignment:
Q  262 tcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatt 361  Q
    ||||||||||| ||||| || | |||  | ||||||||| ||| ||||||  || |||||||||||| |||||||||||||||| |||||||||||||||    
T  29381263 tcagaactgtgacagttcaagaggaagacaactttggagcttcaggagagtttcaatcttctccttggttttctagggtatgttattatctttagtaatt 29381362  T
Q  362 tgtttttagttac 374  Q
    |||||||||||||    
T  29381363 tgtttttagttac 29381375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 125 - 278
Target Start/End: Complemental strand, 20399929 - 20399776
Alignment:
Q  125 tgcgccccaagcatctcaaaatgtaggggcgcaagcataactttattcctttttgttagtaaagcccacgtttttaacccaaaccttgttataaatctc- 223  Q
    |||||||||||| ||| ||||||| | ||||||| | ||| ||||||| ||||| |  ||  |||||| |||||||||| |||||  |||| |||| ||     
T  20399929 tgcgccccaagcttcttaaaatgtggcggcgcaaacgtaattttattcttttttctaggtttagcccatgtttttaacc-aaacccagttagaaatatcc 20399831  T
Q  224 attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtt 278  Q
    | ||||||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  20399830 actataaatactagccttcgtcatacagaatttctcgttcagaactgtagcagtt 20399776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 244 - 374
Target Start/End: Original strand, 29761598 - 29761727
Alignment:
Q  244 tcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatg 343  Q
    ||||||||||||||| ||||| |||||   ||||| || | ||| ||  |||||||| ||| ||||||  | ||| |||||||||||||||||| |||||    
T  29761598 tcattcagaatttcttgttcaaaactgaaccagttcaagaggaaggcatctttggagcttcaggagagtttgtatattctccttgattttctagtgtatg 29761697  T
Q  344 tttttatctttagtaatttgtttttagttac 374  Q
    |||| ||||||||||||||||||||||||||    
T  29761698 tttt-atctttagtaatttgtttttagttac 29761727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 24388880 - 24388972
Alignment:
Q  187 agcccacgtttttaacccaaaccttgttataaatctcat-tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtt 278  Q
    ||||| |||||||| ||||||||  |||| |||||||   ||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  24388880 agcccgcgtttttagcccaaacccagttagaaatctccgctataaatactagccttcctcgttcagaatttctcgttcagaactgtggcagtt 24388972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 29766066 - 29766126
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  29766066 tctaccttctccttgattttctaaggtatgtttttatctttagaaatttgtttttagttac 29766126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 34498740 - 34498681
Alignment:
Q  316 tatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttact 375  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||    
T  34498740 tatcttctccttgtttttctagggtatgtttttatctttaataatttgtctttagttact 34498681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 17510664 - 17510593
Alignment:
Q  15 tgaagacgaagacctaaaaacgacgaagataggagaaattggacccggaagcacacaagaatgcgcctaggg 86  Q
    |||||||||| ||||||||||||| |||||  |||||||||| || | |||||||||||||||||| |||||    
T  17510664 tgaagacgaaaacctaaaaacgacaaagatcagagaaattgggcctgaaagcacacaagaatgcgcttaggg 17510593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 15176764 - 15176827
Alignment:
Q  15 tgaagacgaagacctaaaaacgacgaagataggagaaattggacccggaagcacacaagaatgc 78  Q
    ||||||||||||||||||||||| ||||||  |||||||||| || | ||||||||||| ||||    
T  15176764 tgaagacgaagacctaaaaacgatgaagatcagagaaattgggcctgaaagcacacaagcatgc 15176827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 20400117 - 20400046
Alignment:
Q  15 tgaagacgaagacctaaaaacgacgaagataggagaaattggacccggaagcacacaagaatgcgcctaggg 86  Q
    ||||||||||||||||||||| |||||||| | ||||||||| ||  ||||| |||||| |||||| |||||    
T  20400117 tgaagacgaagacctaaaaaccacgaagatcgaagaaattgggcctagaagctcacaagcatgcgcttaggg 20400046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 335 - 374
Target Start/End: Original strand, 24520647 - 24520686
Alignment:
Q  335 tagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  24520647 tagggtatgtttttatcgttagtaatttgtttttagttac 24520686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 24722305 - 24722376
Alignment:
Q  15 tgaagacgaagacctaaaaacgacgaagataggagaaattggacccggaagcacacaagaatgcgcctaggg 86  Q
    |||||||||| ||||||||||||||||||| | ||||||||  ||||||||||||    |||||||||||||    
T  24722305 tgaagacgaacacctaaaaacgacgaagatcgaagaaattgagcccggaagcacaatcaaatgcgcctaggg 24722376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 24520570 - 24520618
Alignment:
Q  227 ataaatactagccttcttcattcagaatttctcgttcagaactgtggca 275  Q
    |||||||||||||||| | |||||||||||||| ||||||| |||||||    
T  24520570 ataaatactagccttccttattcagaatttctcattcagaattgtggca 24520618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 25181311 - 25181355
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactg 270  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||    
T  25181311 tataaataccagccttcctcattcacaatttctcgttcagaactg 25181355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 357
Target Start/End: Complemental strand, 30832435 - 30832392
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagt 357  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||    
T  30832435 tctatcttctccttgtttttctagggtgtgtttttatccttagt 30832392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 180; Significance: 8e-97; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 402 - 725
Target Start/End: Complemental strand, 25922870 - 25922543
Alignment:
Q  402 aaacgatttacaaaacaa-ttccaaatttcctatgttaatgtaattcaaataactaatttattaatagttaaaaatggagaaaaatgtatcagcttcgaa 500  Q
    ||||||||||||||| || ||||||||||||||||||||| || |||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  25922870 aaacgatttacaaaaaaaattccaaatttcctatgttaatatatttcaaagaactaatttattaatagttgaaaatggagaaaaatgtatcagcttcaaa 25922771  T
Q  501 cgaacaaaagtgaaacttgtgtgaagtttctagcggaagataacatgtctccacatttctaaacatactaaatagttcaaagcaacaattaaagaagcaa 600  Q
     ||||||||||||||||||| | ||||||| ||||||||||| || |||||| ||||||||||||||||||||| |||||| ||||||| |||||  ||     
T  25922770 agaacaaaagtgaaacttgtttaaagtttccagcggaagatagcacgtctccgcatttctaaacatactaaataattcaaaacaacaatcaaagagccat 25922671  T
Q  601 aaagaaaatccttatttcaaaatagatgacg-aaaacccaatgtgatttc-cccg-ttcccgaacaagcatcaaccataaatcttacacatcttcttgtg 697  Q
    |||     |||||||||||||||| |||||| ||||||||   ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  25922670 aaaatccttccttatttcaaaataaatgacgaaaaacccataatgatttctcccgtttcgcgaacaagcatcaaccataaatcttacacatcttcttgtg 25922571  T
Q  698 tacctaaaaatgttggtgtaaggggtca 725  Q
    ||||||||||||||||||||||||||||    
T  25922570 tacctaaaaatgttggtgtaaggggtca 25922543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 187 - 374
Target Start/End: Original strand, 15542845 - 15543033
Alignment:
Q  187 agcccacgtttttaacccaaaccttgttataaatctc-attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatg 285  Q
    ||||| |||||||| ||||||||  |||| ||||||| | ||||||||||||||||| ||||| |||||||||| |||| || |||||||||| |  | |    
T  15542845 agcccgcgtttttagcccaaaccgagttagaaatctccactataaatactagccttcctcatttagaatttctcattcataattgtggcagttcaggagg 15542944  T
Q  286 aaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15542945 aaggctactttggagcttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgttttttgttac 15543033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 187 - 374
Target Start/End: Original strand, 21333591 - 21333779
Alignment:
Q  187 agcccacgtttttaacccaaaccttgttataaatctc-attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatg 285  Q
    ||||||||| |||| ||||||||  |||| |||| || | ||||||||| ||||||| |||||||||||||||||||||||||||| |||||| || | |    
T  21333591 agcccacgtgtttagcccaaacccagttaaaaatgtccactataaataccagccttcctcattcagaatttctcgttcagaactgtagcagttcaagagg 21333690  T
Q  286 aaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    || |||||||||||| ||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21333691 aaggctactttggagattcaggagagaatatatcttctccttgattttctagggtatgcttttatctttagtaatttgtttttagttac 21333779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 18826931 - 18826739
Alignment:
Q  182 agtaaagcccacgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagttta 280  Q
    ||||||||| || ||||||||||||||   | || ||| ||||| ||||||||| | ||||| |||||||||||||||||||||||| |||||||||| |    
T  18826931 agtaaagccaacatttttaacccaaactcaggtagaaactctcactataaataccaaccttcctcattcagaatttctcgttcagaaatgtggcagttca 18826832  T
Q  281 atatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtta 373  Q
    | | ||| || ||||||||| ||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  18826831 agaggaaggcgactttggagcttcgggagagtttctatcttctccttgaatttctagggtatgtttttatctttagtaatttgtttctagtta 18826739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 149 - 374
Target Start/End: Original strand, 18528032 - 18528258
Alignment:
Q  149 aggggcgcaagcataactttattcctttttgttagtaaagcccacgtttttaacccaaaccttgttataaatctcat-tataaatactagccttcttcat 247  Q
    ||||||||| || ||| ||||||| |||||||  |   |||||  ||||||| ||||||||   ||| ||||||||  ||||||||||||||||| | ||    
T  18528032 aggggcgcaggcgtaattttattcgtttttgtggggttagcccgtgtttttagcccaaacccaattagaaatctcaactataaatactagccttccttat 18528131  T
Q  248 tcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttt 347  Q
    | |||||||||| ||||||| |||||||||| |  | ||| |||||||||||| |||| | |||||||||||||||||||||||| |||||||||| |||    
T  18528132 ttagaatttctcattcagaattgtggcagttcatgaggaaggctactttggagcttcgcgtgagaatctatcttctccttgatttcctagggtatgcttt 18528231  T
Q  348 tatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||    
T  18528232 tatctttagtaatttgtttttagttac 18528258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 26611914 - 26612068
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||| |||||| | |||| || | ||| |  ||||||||| ||||||||||  ||||||    
T  26611914 tctcactataaatactagtcttcctcattcagaatttctcgttcaaaactgtagaagttcaagaggaaggagactttggagcttcgggagagtttctatc 26612013  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26612014 ttctctttgattttctagggtatgtttttatctttagtaatttgtttttagttac 26612068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 12209810 - 12209656
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| |||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| | ||| || | ||| ||| |||||  |||  ||||||    
T  12209810 tctcactataaatactaggcttcctcattcagaatttctcgtttagaactgtggcagtttaagaggaaggcaattttagagcttcggatgagtttctatc 12209711  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  12209710 ttctccttgattttccagagtatgtttttatctttagtaatttgtttttagttac 12209656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 129 - 373
Target Start/End: Original strand, 21665550 - 21665795
Alignment:
Q  129 ccccaagcatctcaaaatgtaggggcgcaagcataactttattcctttttgttagtaaagcccacgtttttaacccaaaccttgttataaatctc-atta 227  Q
    |||||||| ||| |||||  ||||||||| |  ||| ||||||  |||||||  ||||| | | | |||||| ||||||||  |||| ||||||| | ||    
T  21665550 ccccaagcttcttaaaatacaggggcgcaggtgtaattttatttatttttgtgggtaaaactcgcatttttagcccaaacccagttaaaaatctccaata 21665649  T
Q  228 taaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcctt 327  Q
    ||||||||||||||| ||||||| |||||||| |||| || ||  |||||| || | ||| |||||||||||| |||||||| |||| ||||||||||||    
T  21665650 taaatactagccttcctcattcataatttctcattcaaaattgaagcagttcaagaggaaggctactttggagcttcgggagggaatatatcttctcctt 21665749  T
Q  328 gattttctagggtatgtttttatctttagtaatttgtttttagtta 373  Q
     |||||||| ||||||||||||||| ||||||||||||||||||||    
T  21665750 aattttctaaggtatgtttttatctgtagtaatttgtttttagtta 21665795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 728668 - 728548
Alignment:
Q  254 tttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctt 353  Q
    ||||||||||||||||| ||||||| || | ||| |||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  728668 tttctcgttcagaactgaggcagttcaagaggaaggctactttggagcttcgggagagaaactatcttctccttgattttttagggtatgtttttatctt 728569  T
Q  354 tagtaatttgtttttagttac 374  Q
    |||||||||| ||||||||||    
T  728568 tagtaatttgattttagttac 728548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 246 - 374
Target Start/End: Original strand, 15159404 - 15159532
Alignment:
Q  246 attcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtt 345  Q
    |||||||||||||||||||||||||||||||||||| | ||| || ||||||||| ||  ||||||  | ||||||||||||||||||||||||||||||    
T  15159404 attcagaatttctcgttcagaactgtggcagtttaagaggaaggcaactttggagcttgcggagagtttatatcttctccttgattttctagggtatgtt 15159503  T
Q  346 tttatctttagtaatttgtttttagttac 374  Q
    ||||||||| |||||||||||||||||||    
T  15159504 tttatctttggtaatttgtttttagttac 15159532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 226 - 374
Target Start/End: Complemental strand, 24055207 - 24055059
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||| | ||||| | ||||||||||||||||| |||| |||||||||| || | ||| || ||||||||| |||||||||   ||||| || |||    
T  24055207 tataaataccaaccttcctgattcagaatttctcgtttagaattgtggcagttcaagaggaaggcgactttggagcttcgggagaatttctatattttcc 24055108  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24055107 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 24055059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 18735113 - 18735267
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| ||||||| ||||| |||||||||||||||||||||| |||||  || | ||| |  |||||| || ||| ||||||  ||||||    
T  18735113 tctcactataaataccagccttcctcatttagaatttctcgttcagaactgttgcagtgcaagaggaaggtgactttgaagcttcaggagagtttctatc 18735212  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  18735213 ttctccttgcttttctagggtttgtttttatctttagtaatttgtttttagttac 18735267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 25402949 - 25403103
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||| ||| | ||||| |||||||||||  ||| ||||||||||||||| || || | ||| || |||||| || ||||||||||  ||||||    
T  25402949 tctcactataagtaccaaccttcctcattcagaatacctcattcagaactgtggcaattcaagaggaaggcgactttgaagcttcgggagagtttctatc 25403048  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25403049 ttctccttgattttctagggtatgtttttatctttagtaaattgtttttagttac 25403103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 183 - 374
Target Start/End: Complemental strand, 20107410 - 20107218
Alignment:
Q  183 gtaaagcccacgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaa 281  Q
    ||||||||| |  ||||| ||||||||||| || ||| ||||| ||||||||| ||||||| |||||||||||||||||||||||||| |  ||  | ||    
T  20107410 gtaaagcccgcacttttagcccaaaccttggtagaaactctcactataaataccagccttcctcattcagaatttctcgttcagaactataacaactcaa 20107311  T
Q  282 tatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
     | |||  |   ||||||| ||| ||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20107310 gaggaagacggttttggagcttcaggagagtttctatcttctccttgattttctagggtatgtttttatctgtagtaatttgtttttagttac 20107218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 20147646 - 20147561
Alignment:
Q  289 gctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20147646 gctactttggagcttcgggagagaatctatattctccttgattttccagggtatgtttttatctttagtaatttgtttttagttac 20147561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 257 - 374
Target Start/End: Original strand, 31234870 - 31234987
Alignment:
Q  257 ctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttag 356  Q
    ||||||||||||| ||||||||||| | ||| || ||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||     
T  31234870 ctcgttcagaactatggcagtttaagaggaaggcaactttggagtttcaggagagtttctatcttctccttgattttctagggtatgtttttatctttac 31234969  T
Q  357 taatttgtttttagttac 374  Q
    | ||||||||||| ||||    
T  31234970 tgatttgtttttaattac 31234987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 244 - 372
Target Start/End: Original strand, 17609796 - 17609923
Alignment:
Q  244 tcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatg 343  Q
    ||||||||||||||| |||||||||| |||||||| || | ||| || ||||||||| ||| ||||||  ||||||||||||||||||||||| |||||     
T  17609796 tcattcagaatttctggttcagaactatggcagttcaagaggaaggcaactttggagcttcaggagagtttctatcttctccttgattttcta-ggtatt 17609894  T
Q  344 tttttatctttagtaatttgtttttagtt 372  Q
    |||||||||||||||||||||||||||||    
T  17609895 tttttatctttagtaatttgtttttagtt 17609923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 18831709 - 18831556
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| |||| ||||  |||||| | ||||| |||||||||||||||||| |||||||| || |  || |  ||||||||| ||||||||||  ||||||    
T  18831709 tctcactatatatacccgccttcctaattcataatttctcgttcagaactatggcagttcaagagaaaggagactttggagcttcgggagagtttctatc 18831610  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  18831609 ttctccttgattttctagggtatgtttttatctttagt-atttttttttagttac 18831556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 524 - 732
Target Start/End: Complemental strand, 17240543 - 17240338
Alignment:
Q  524 aagtttctagcggaagataacatgtctccacatttctaaacatactaaatagttcaaagcaacaattaaagaagcaaaaagaaaatccttatttcaaaat 623  Q
    ||||| |||| ||||||||||  |||||| ||||  |||||||| |||||| |||||| ||||||||||||||     || |||||||||||||||||||    
T  17240543 aagttcctagtggaagataactcgtctccgcattcttaaacataataaataattcaaaacaacaattaaagaac----aataaaatccttatttcaaaat 17240448  T
Q  624 agatgacgaaaacccaatgtgatttcccc-gttcccgaa-caagcatcaaccataaatcttacacatcttcttgtgtacctaaaaatgttggtgtaaggg 721  Q
    ||||||||||||| ||  |||||||     | ||  ||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  17240447 agatgacgaaaactcatagtgatttatgaagatcgtgaaacaagcatcaaccataaatcttacacatcttcttgtgtacct-aaaatattggtgtaaggg 17240349  T
Q  722 gtcagcttcca 732  Q
     |||| |||||    
T  17240348 atcagtttcca 17240338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 224 - 374
Target Start/End: Complemental strand, 9402823 - 9402673
Alignment:
Q  224 attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttct 323  Q
    |||||||| | ||| |||||||||||||||||||||||||| |||| |||||||| ||   ||| || |||||||||  ||  ||| |  ||||||||||    
T  9402823 attataaaaattagtcttcttcattcagaatttctcgttcataactatggcagttcaaggggaaggcaactttggagcatcaagagtgtttctatcttct 9402724  T
Q  324 ccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  9402723 cctttattttctagggtatatttttatctttaataatttgtttttagttac 9402673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 244 - 374
Target Start/End: Original strand, 21983618 - 21983748
Alignment:
Q  244 tcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatg 343  Q
    ||||||||||||| |||||||  |||||||||||| || | ||| |  ||||||||| |||| |||||  |||||||||||||||||||   ||||||||    
T  21983618 tcattcagaatttatcgttcaatactgtggcagttcaagaggaaggaaactttggagcttcgagagagtttctatcttctccttgatttataagggtatg 21983717  T
Q  344 tttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||    
T  21983718 tttttatctttagtaatttgtttttagttac 21983748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 226 - 370
Target Start/End: Complemental strand, 21450301 - 21450159
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||| ||||||| ||||||||||||||||||||  || ||||| |||| || | ||| |  ||||||||| ||  |  |||||||||||||||||    
T  21450301 tataaataccagccttcctcattcagaatttctcgttcgaaattgtggtagttcaagaggaaggtgactttggagctttag--gagaatctatcttctcc 21450204  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttag 370  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    
T  21450203 ttgattttctagggtatatttttatctttagtaatttatttttag 21450159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 244 - 374
Target Start/End: Complemental strand, 27545897 - 27545766
Alignment:
Q  244 tcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatg 343  Q
    ||||||||||||||| |||||||||||  |||||| || | ||| || ||||||||| |||  || ||  ||||||||||||||||||||||||||||||    
T  27545897 tcattcagaatttcttgttcagaactgaagcagttcaagaggaaggcaactttggagcttcaagaaagtttctatcttctccttgattttctagggtatg 27545798  T
Q  344 t-ttttatctttagtaatttgtttttagttac 374  Q
    | ||||||||||||||  ||||||||||||||    
T  27545797 ttttttatctttagtatcttgtttttagttac 27545766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 13267377 - 13267223
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||| || | ||| || | | | ||| ||||   |||  ||||||    
T  13267377 tctcactataaatacaagccttcctcattcataatttctcgttcaaaactgtggcagttcaagaggaaggcaattctagagcttcgaatgagtttctatc 13267278  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||  | ||||||||||||| |||||||||| |||||||||||    
T  13267277 ttctccttgattttccggtgtatgtttttatccttagtaatttatttttagttac 13267223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 228 - 374
Target Start/End: Complemental strand, 27973080 - 27972933
Alignment:
Q  228 taaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggag-tttcgggagagaatctatcttctcct 326  Q
    ||||||| | ||||| || |||||||||||||||||| |||||| |||||| || | ||| || | | | ||| ||||||  |||  ||||||||| |||    
T  27973080 taaataccaaccttcctcgttcagaatttctcgttcaaaactgtagcagttcaaaaagaaggcaattctagagctttcggaggagtttctatcttcgcct 27972981  T
Q  327 tgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    || |||| ||||||||||||||||||||||||||||||||||||||||    
T  27972980 tgtttttatagggtatgtttttatctttagtaatttgtttttagttac 27972933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 335
Target Start/End: Complemental strand, 14782114 - 14781967
Alignment:
Q  187 agcccacgtttttaacccaaaccttgttataaatctc-attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatg 285  Q
    ||||| |||||||| |||||||   |||| ||||||| | |||||||| |||||||| ||||||| ||||||||||||| |||| ||||||||  | | |    
T  14782114 agcccgcgtttttagcccaaactcagttagaaatctccactataaatattagccttcctcattcaaaatttctcgttcaaaactatggcagttcgagagg 14782015  T
Q  286 aaagctactttggagtttcgggagagaatctatcttctccttgattttct 335  Q
    || || ||||||||| |||||  || ||| ||||||||||||||||||||    
T  14782014 aaggcaactttggagcttcgg--gataatatatcttctccttgattttct 14781967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 261 - 372
Target Start/End: Complemental strand, 16180199 - 16180091
Alignment:
Q  261 ttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaat 360  Q
    |||||||||||||||||| || | ||| || ||||||||  ||||||||||  |||||| |||   | |||||||||||||||||||||| |||||||||    
T  16180199 ttcagaactgtggcagttcaagaggaaggcaactttggatcttcgggagagtttctatcatct---ttattttctagggtatgtttttatttttagtaat 16180103  T
Q  361 ttgtttttagtt 372  Q
    ||| ||||||||    
T  16180102 ttgcttttagtt 16180091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 236 - 331
Target Start/End: Original strand, 16915839 - 16915934
Alignment:
Q  236 agccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgatt 331  Q
    ||||||| ||||||||||||| |||||||||||||  |||||| |  | |||||||||||||||| ||| |||||   ||||||||||||||||||    
T  16915839 agccttcctcattcagaatttttcgttcagaactggagcagttcatgaggaaagctactttggagcttcaggagaatttctatcttctccttgatt 16915934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 327 - 374
Target Start/End: Complemental strand, 22624025 - 22623978
Alignment:
Q  327 tgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  22624025 tgattttctaggttatgtttttatctttagtaatttgtttttagttac 22623978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 261 - 350
Target Start/End: Complemental strand, 22624114 - 22624025
Alignment:
Q  261 ttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttat 350  Q
    |||||||||||||||||| || | ||| || ||||||||| ||||||||||  ||||| || | |||||||||||||| |||||||||||    
T  22624114 ttcagaactgtggcagttcaagaagaaggcgactttggagcttcgggagagtttctatattatacttgattttctaggttatgtttttat 22624025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 292 - 369
Target Start/End: Complemental strand, 36016534 - 36016454
Alignment:
Q  292 actttggagtttcgggagagaatctatcttctccttgattttctagggtatgt---ttttatctttagtaatttgttttta 369  Q
    ||||| ||| ||| ||||||  |||||||||||||||||||||||||||||||   |||||||||||||||| | ||||||    
T  36016534 actttagagcttcaggagagtttctatcttctccttgattttctagggtatgttttttttatctttagtaatattttttta 36016454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 314 - 368
Target Start/End: Original strand, 51470074 - 51470128
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgttttt 368  Q
    ||||||||||||||| ||||||||||||||||||||||| || |||||| |||||    
T  51470074 tctatcttctccttgtttttctagggtatgtttttatctataataattttttttt 51470128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 28009236 - 28009196
Alignment:
Q  330 ttttctagggtatgtttttatctttagtaatttgtttttag 370  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  28009236 ttttctagggtatgtttttatctttagtaatttatttttag 28009196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 314 - 374
Target Start/End: Complemental strand, 26021852 - 26021791
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaa-tttgtttttagttac 374  Q
    ||||||||| ||||| ||||||| | |||||||||||||||||||| ||||| |||||||||    
T  26021852 tctatcttccccttgtttttctaagatatgtttttatctttagtaattttgtctttagttac 26021791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 21333400 - 21333444
Alignment:
Q  15 tgaagacgaagacctaaaaacgacgaagataggagaaattggaccc 60  Q
    |||||||||||||||||||||||| || || |||||||||||||||    
T  21333400 tgaagacgaagacctaaaaacgac-aaaatcggagaaattggaccc 21333444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 27116804 - 27116865
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatc-tttagtaatttgtttttagttac 374  Q
    ||||||||||||||| ||||||||| || ||||||||| ||| | ||||||| |||||||||    
T  27116804 tctatcttctccttgtttttctaggctaagtttttatctttttgaaatttgtctttagttac 27116865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 9e-69; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 115 - 374
Target Start/End: Complemental strand, 29144249 - 29143989
Alignment:
Q  115 gcatatgtgatgcgccccaagcatctcaaaatgtaggggcgcaagcataactttattcctttttgttagtaaagcccacgtttttaacccaaaccttgtt 214  Q
    |||||||  |||| |||||||||||| ||||||| ||||||||||| ||| ||||||| ||||||   ||||||||| |||||||| ||||||||   ||    
T  29144249 gcatatgctatgcaccccaagcatcttaaaatgtgggggcgcaagcgtaattttattcatttttgcgggtaaagcccgcgtttttagcccaaacccaatt 29144150  T
Q  215 ataaatct-cattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaa 313  Q
      |||||| |||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| || | ||| |||||||||||| || |||||||||    
T  29144149 gaaaatcttcattataaatactaaccttcctcattcagaatttttcgttcagaactgtggcagttcaagaggaaggctactttggagctttgggagagaa 29144050  T
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  29144049 tctattttctccttgattttctagggtatatttttttctttagtaatttgtttttagttac 29143989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 202 - 374
Target Start/End: Original strand, 17629255 - 17629428
Alignment:
Q  202 cccaaaccttgttataaatctc-attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggag 300  Q
    ||||||||| |||| ||||||| | |||||||||||| |||| ||||||||||||||||||||||||||||||||||| || | ||| || ||||| |||    
T  17629255 cccaaacctagttagaaatctccactataaatactagtcttcctcattcagaatttctcgttcagaactgtggcagttcaagaggaatgcaactttagag 17629354  T
Q  301 tttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
     ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17629355 cttcgggagagaatctatattttcctttattttctagggtatgtttttatctttagtaatttgtttttagttac 17629428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 187 - 374
Target Start/End: Original strand, 27907997 - 27908185
Alignment:
Q  187 agcccacgtttttaacccaaaccttgttataaatctc-attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatg 285  Q
    ||||| |||||||||||||||||  |||| ||||||| ||||||||||  ||||||| |||||| ||||||||||||||||||| |||||||| || | |    
T  27907997 agcccgcgtttttaacccaaacccagttagaaatctccattataaatatcagccttcctcattctgaatttctcgttcagaactatggcagttcaagagg 27908096  T
Q  286 aaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||| ||||||||| ||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27908097 aaagcaactttggagcttcggtagaatttctatcttctccttgattttctagggtatgtttttatctttagtaatttgtctttagttac 27908185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 187 - 374
Target Start/End: Original strand, 22378359 - 22378547
Alignment:
Q  187 agcccacgtttttaacccaaaccttgttataaatctc-attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatg 285  Q
    ||||| |||||||| ||||||||   ||| ||||||| | | ||||||||||||||| ||||||| ||| ||||||| |||| |||||||||| || | |    
T  22378359 agcccgcgtttttagcccaaacccaattagaaatctccactctaaatactagccttcctcattcaaaatatctcgttgagaattgtggcagttcaagagg 22378458  T
Q  286 aaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    || |||||||||||| ||||| ||||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  22378459 aaggctactttggagcttcggaagagaatatatcttctcattgcttttttagggtatgtttttatctttagtaatttgtttttagttac 22378547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 183 - 374
Target Start/End: Complemental strand, 15340524 - 15340332
Alignment:
Q  183 gtaaagcccacgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaa 281  Q
    |||||| || |||||||| |||||||   |||| ||| ||||| |||||||| |||||||| ||||||| |||||||||||||||||| || || |||||    
T  15340524 gtaaagtccgcgtttttagcccaaactcagttagaaactctcactataaatattagccttcctcattcaaaatttctcgttcagaactttgacattttaa 15340425  T
Q  282 tatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
     | ||| |  ||||||||| ||| | ||||  ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  15340424 gaggaaggaaactttggagattcagaagagtttctatcttctccttgattttctagggtatgtttttatctgttgtaatttgtttttagttac 15340332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 244 - 374
Target Start/End: Original strand, 24089805 - 24089935
Alignment:
Q  244 tcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatg 343  Q
    |||||||||||||||||||||||||||| |||||| || | ||| || ||||||||  ||  ||||||  ||||||||||||||||||||||||||||||    
T  24089805 tcattcagaatttctcgttcagaactgtagcagttcaagaggaaggcgactttggatcttaaggagagtttctatcttctccttgattttctagggtatg 24089904  T
Q  344 tttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||| |||||||||||    
T  24089905 tttttatctttagtaatttatttttagttac 24089935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 25537090 - 25536937
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||  ||||||| |||||||||||||||||||||||||||  | |||| || | ||| || ||||||||| ||| | ||||  | ||||    
T  25537090 tctcactataaatatcagccttcctcattcagaatttctcgttcagaactggagaagttcaagaggaaggcaactttggagcttcag-agagtttttatc 25536992  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25536991 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 25536937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 226 - 374
Target Start/End: Complemental strand, 25922061 - 25921913
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||||||||||| | ||| |||||||||||||||||||||   ||||| || | ||| || ||||||||| ||  |||||    |||||||||||    
T  25922061 tataaatactagccttcctaatttagaatttctcgttcagaactggatcagttcaagaggaaggcaactttggaggttaaggagaattactatcttctcc 25921962  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25921961 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 25921913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 226 - 374
Target Start/End: Original strand, 27540770 - 27540918
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||| ||||  ||   ||| || ||||||||  || |||||||  ||||||||||||    
T  27540770 tataaatactagccttcctcattcagaattactcgttcagaactgtgacagtacaagtggaaggcaactttggaactttgggagagtttctatcttctcc 27540869  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||| |||||||| |||| |||||||||    
T  27540870 ttgattttctagggtatgtttttatatttagtaacttgtgtttagttac 27540918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 187 - 374
Target Start/End: Complemental strand, 28929915 - 28929727
Alignment:
Q  187 agcccacgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatg 285  Q
    ||||| |||||||| ||||||||  |||| ||| ||||| ||||||||| || |||| ||||||| ||||||||||||| || ||||||| || || | |    
T  28929915 agcccgcgtttttagcccaaacccagttagaaactctcactataaataccagtcttcctcattcataatttctcgttcataattgtggcatttcaagagg 28929816  T
Q  286 aaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    || || ||||||||| ||  | ||||  |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  28929815 aaggcaactttggagcttaagaagagtttctatcttctccttgattatctagggtatgtttttatctttagcaatttgtttttagttac 28929727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 25531744 - 25531591
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| |||||||||  |||||| |||||||||||||||||||||||||||  |||| | || | ||| |  ||||||||| ||||| ||||  ||||||    
T  25531744 tctcactataaataccggccttcctcattcagaatttctcgttcagaactggagcagatcaagaggaaggaaactttggagcttcgg-agagtttctatc 25531646  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  25531645 ttctccttgattttcttgggtatgtttttatctttagttatttgtttttagttac 25531591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 17674607 - 17674720
Alignment:
Q  261 ttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaat 360  Q
    |||||||||||||||||| || | ||| || ||||| ||| ||||||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||    
T  17674607 ttcagaactgtggcagttcaagaggaatgcaactttagagcttcgggagataatctatattttcctttattttctagggtatgtttttatctttagtaat 17674706  T
Q  361 ttgtttttagttac 374  Q
    ||||||||||||||    
T  17674707 ttgtttttagttac 17674720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 220 - 373
Target Start/End: Original strand, 31803662 - 31803815
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| |||||||||||| |||  ||||||| ||||||| ||| |||| ||||||| || || | ||| || ||||||||| ||| | | ||  ||||||    
T  31803662 tctcactataaatactagtctttctcattcataatttcttgtttagaattgtggcacttcaagaggaatgcaactttggagcttcagcatagtttctatc 31803761  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtta 373  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||||||||    
T  31803762 ttctccttgattttctagagtatgtttttatctttagtactttatttttagtta 31803815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 220 - 367
Target Start/End: Original strand, 26659670 - 26659815
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||| ||||| | ||||| ||||||| ||||||||||||| |||||  ||||||||| | ||| |||||||||||| ||||||||||  | |||     
T  26659670 tctcactatgaataccaaccttcctcattcataatttctcgttcaaaactggagcagtttaagaagaaggctactttggagcttcgggagagtttatatt 26659769  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttt 367  Q
    |||| |||||||||||||| ||||||||||||  ||||||||||||||    
T  26659770 ttcttcttgattttctaggatatgtttttatc--tagtaatttgtttt 26659815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 18121121 - 18121276
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggag-agaatctat 318  Q
    ||||| ||||||||| || |||  ||||||||||||| ||||||| |||||   ||||| || | |||  ||||||||||| |||||| | ||  |||||    
T  18121121 tctcactataaataccagtctttctcattcagaatttgtcgttcaaaactggaccagttcaagaggaagactactttggagcttcggggggagtttctat 18121220  T
Q  319 cttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||  ||||||| ||||| |||||||||||    
T  18121221 cttctccttgattttctagggtatgttttattctttagcaatttatttttagttac 18121276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 25886862 - 25886911
Alignment:
Q  325 cttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25886862 cttgattttctagggtatgtttttatctttagtaatttgtttttagttac 25886911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 29144398 - 29144327
Alignment:
Q  15 tgaagacgaagacctaaaaacgacgaagataggagaaattggacccggaagcacacaagaatgcgcctaggg 86  Q
    |||||||||||||||||||||||||||| || |||||||||| ||| ||| |||| ||| ||||||||||||    
T  29144398 tgaagacgaagacctaaaaacgacgaagttaagagaaattgggcccagaatcacataagcatgcgcctaggg 29144327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 17350544 - 17350486
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtt 278  Q
    ||||| |||||||||||| |||| ||||||||||||||| ||||| |||||||||||||    
T  17350544 tctcactataaatactagtcttcctcattcagaatttctggttcaaaactgtggcagtt 17350486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 17199075 - 17199025
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactg 270  Q
    ||||| ||||||||| || |||| |||||||||||||||||||||||||||    
T  17199075 tctcactataaataccagtcttcctcattcagaatttctcgttcagaactg 17199025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 359
Target Start/End: Complemental strand, 18122184 - 18122150
Alignment:
Q  325 cttgattttctagggtatgtttttatctttagtaa 359  Q
    |||||||||||||||||||||||||||||||||||    
T  18122184 cttgattttctagggtatgtttttatctttagtaa 18122150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 28766345 - 28766304
Alignment:
Q  229 aaatactagccttcttcattcagaatttctcgttcagaactg 270  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  28766345 aaataccagccttcttcattcacaatttctcgttcagaactg 28766304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 340 - 374
Target Start/End: Original strand, 20171614 - 20171648
Alignment:
Q  340 tatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||| |||||||||||||||||||||||||    
T  20171614 tatgtttttgtctttagtaatttgtttttagttac 20171648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 22378163 - 22378232
Alignment:
Q  17 aagacgaagacctaaaaacgacgaagataggagaaattggacccggaagcacacaagaatgcgcctaggg 86  Q
    ||||||||||| |||||||||||||||| | ||||| ||| |||| |||||||    |||||||||||||    
T  22378163 aagacgaagacataaaaacgacgaagatcgaagaaactgggcccgaaagcacaatcaaatgcgcctaggg 22378232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 23010650 - 23010694
Alignment:
Q  225 ttataaatactagccttcttcattcagaatttctcgttcagaactg 270  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||    
T  23010650 ttataaatact-gccttcctcattcataatttctcgttcagaactg 23010694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 3e-59; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 187 - 374
Target Start/End: Original strand, 39271994 - 39272182
Alignment:
Q  187 agcccacgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatg 285  Q
    ||||| |||||||||||||||||  |||| ||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || | |    
T  39271994 agcccgcgtttttaacccaaacccagttagaaactctaactataaatactagccttcctcattcagaatttctcgttcagaactgtggcagttcaagagg 39272093  T
Q  286 aaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    || || ||||||||| ||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39272094 aaggcaactttggagcttcgggagagtttctatcatctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 39272182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 184 - 374
Target Start/End: Complemental strand, 4450232 - 4450042
Alignment:
Q  184 taaagcccacgtttttaacccaaaccttgttataaatctc-attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaat 282  Q
    ||||| || |||||||| ||||| ||  |||| ||||||| ||||||||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||     
T  4450232 taaagtccgcgtttttaccccaatcccagttagaaatctccattataaatactagccttcctcatttagaatttctcgttcgaaactttggcagttcaag 4450133  T
Q  283 atgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    | ||| ||||||||| || ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4450132 aggaaggctactttgaagcttcgggagagaatctatctactccttgattttctagggtatg-ttttatctttagtaatttgtttttagttac 4450042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 124 - 374
Target Start/End: Original strand, 8052872 - 8053129
Alignment:
Q  124 atgcgccccaagcatctcaaaatgtaggggcgcaagcataactttattcctttttgttagtaaagcccacgtttttaacccaaaccttgttataaatctc 223  Q
    |||||||||||||||||||||    |||||||||  | ||| ||||||| ||||| | |||  |||||||||||||| ||||||||  |||| |||||||    
T  8052872 atgcgccccaagcatctcaaatgcgaggggcgcagtcgtaattttattcgtttttataagtttagcccacgtttttagcccaaacca-gttagaaatctc 8052970  T
Q  224 -attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttc 322  Q
     | ||||||||||||||||| |||||| |||||||||||||||||||||||||||| || | ||| |||||||||||| ||| | ||||||||||| |||    
T  8052971 cactataaatactagccttcctcattctgaatttctcgttcagaactgtggcagttcaagaggaaggctactttggagcttcagaagagaatctatgttc 8053070  T
Q  323 tccttgat-------tttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||         |||||||||||||| |||||||||||||||||||||||||||    
T  8053071 tccttgatactctagagtctagggtatgtttctatctttagtaatttgtttttagttac 8053129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 213 - 374
Target Start/End: Original strand, 18362564 - 18362726
Alignment:
Q  213 ttataaatctc-attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagag 311  Q
    ||||||||||| | ||||||||||||| ||| ||||||| ||||||||||||||||||||||||||| || |  || |||||||||||  ||||||||||    
T  18362564 ttataaatctccactataaatactagcattcctcattcaaaatttctcgttcagaactgtggcagttcaagagaaaggctactttggaccttcgggagag 18362663  T
Q  312 aatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||| ||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18362664 aatttatcttctatttgattttatagggtatgtttttatctttagtaatttgtttttagttac 18362726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 115 - 374
Target Start/End: Complemental strand, 11804364 - 11804104
Alignment:
Q  115 gcatatgtgatgcgccccaagcatctcaaaatgtaggggcgcaagcataactttattcctttttgttagtaaagcccacgtttttaacccaaaccttgtt 214  Q
    |||||||  ||| ||||||||||||| ||||||| |||||| | || ||| ||||||  ||||| |  |||||||    ||||||   |||||||  |||    
T  11804364 gcatatgctatgtgccccaagcatcttaaaatgtgggggcgtatgcgtaattttatttgtttttctaggtaaagcttgtgtttttggtccaaacccagtt 11804265  T
Q  215 ataaatctc-attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaa 313  Q
    | ||||||| | ||||||||||||||||| ||||||||||||||||||||| |||||||||| || || |  || |||| ||||||| ||||||||||||    
T  11804264 agaaatctccactataaatactagccttcctcattcagaatttctcgttcacaactgtggcaattcaagagaaatgctattttggagcttcgggagagaa 11804165  T
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    | ||||||||||||||||||||||| | | ||||||||||||||||||| |||||||||||    
T  11804164 tttatcttctccttgattttctaggatttatttttatctttagtaatttttttttagttac 11804104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 8977866 - 8978020
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||| ||||||||| |||||||||| |||||||||||||||||| ||||| || | ||| || ||||||||| |||  |||||  ||||||    
T  8977866 tctcactataaattctagccttcctcattcagaaattctcgttcagaactgtgacagttcaagaggaaggcaactttggagcttcaagagagtttctatc 8977965  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8977966 ttctccttgattttctagggtatgtttttatctttagtaatttttttttagttac 8978020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 217 - 374
Target Start/End: Complemental strand, 23297891 - 23297734
Alignment:
Q  217 aaatctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatct 316  Q
    |||||||| || ||||||  |||||| |||| |||||||||||||||| || |||||||||| || | |||||| ||||||||| ||| ||||||  |||    
T  23297891 aaatctcactacaaataccggccttcctcatgcagaatttctcgttcaaaattgtggcagttcaagaggaaagcaactttggagcttcaggagagtttct 23297792  T
Q  317 atcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  23297791 atcttctccttgattctctagtgtatgtttttatctttagtaatttgtttttagttac 23297734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 8318047 - 8318200
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||  | ||||| |||||||||||||||||||||| ||||| |||||| || | ||| || ||||||||| ||||||||||  |||||     
T  8318047 tctcactataaataacaaccttcctcattcagaatttctcgttcagtactgtagcagttcaagaggaaggcaactttggagcttcgggagagtttctatt 8318146  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8318147 ttctccttgattttctagggtatg-ttttatctttagtaatttgtttttagttac 8318200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 239 - 374
Target Start/End: Original strand, 13263633 - 13263768
Alignment:
Q  239 cttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagg 338  Q
    |||| ||||||||||| ||||||| |||||| | |||||| || | ||| |  ||||||||| ||||||||||  ||||||||||||||||||||| |||    
T  13263633 cttcctcattcagaatatctcgtttagaactatagcagttcaagaggaaggtgactttggagcttcgggagagtttctatcttctccttgattttcaagg 13263732  T
Q  339 gtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||||||||||||||    
T  13263733 gtatgtttttatctttagtaatttgtttttagttac 13263768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 2565676 - 2565522
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||  ||| ||| ||||||| ||||||||||||||||||||||||||| || ||||| || ||||||||  |||| |||||     |||    
T  2565676 tctcactataaatatcagctttcctcattcataatttctcgttcagaactgtggcagttcaagatgaaggcaactttggatcttcgcgagagttaaaatc 2565577  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  2565576 ttctccttcattttctagggtatgtttttatctttcgtaatttgtttttagttac 2565522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 16057778 - 16057932
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| |||||||||  |||||| |||| ||||| |||||||||||||||   |||||| || | ||| |||||||||||| |||| |||||  ||||||    
T  16057778 tctcaatataaatacccgccttcctcatccagaaattctcgttcagaactagagcagttcaagaggaatgctactttggagcttcgagagagtttctatc 16057877  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  16057878 ttctccttgattttctcgggtatgtttttatctttagtatcttgtttttagttac 16057932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 25692316 - 25692158
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| |||||||||||| |||| ||||||| |||||||| |||||||||||||||||| || | ||| || ||||||||| ||| |  |||  ||||||    
T  25692316 tctcactataaatactagtcttcatcattcataatttctcattcagaactgtggcagttcaagaggaaggcaactttggagcttcagatgagtttctatc 25692217  T
Q  320 ttctccttgattttctaggg----tatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||    ||||||||||||||||||||||| |||||||||||    
T  25692216 ttctccttgattttctagggtatatatgtttttatctttagtaatttatttttagttac 25692158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 226 - 374
Target Start/End: Original strand, 13756011 - 13756158
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||  ||||||| ||||||| || ||||||||  |||||||||||||| || | |||    ||||||||||| ||||||||  ||||||||||||    
T  13756011 tataaatatcagccttcctcattcataaattctcgttttgaactgtggcagttcaagaggaagataactttggagtt-cgggagagtttctatcttctcc 13756109  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13756110 ttgattttctagggtatgtttttatctttagtaatctgtttttagttac 13756158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 13278620 - 13278541
Alignment:
Q  295 ttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13278620 ttggagcttcgggagagaatctatattctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 13278541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 231 - 372
Target Start/End: Original strand, 17190084 - 17190225
Alignment:
Q  231 atactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgat 330  Q
    |||| ||||||| |||||||||||||||||||||||||||  |||||| || | ||| |||||||||||| ||||||||||  ||||||||||| || |     
T  17190084 ataccagccttcctcattcagaatttctcgttcagaactggagcagttcaagaggaaggctactttggagcttcgggagagtttctatcttctcattaac 17190183  T
Q  331 tttctagggtatgtttttatctttagtaatttgtttttagtt 372  Q
    ||||||||||||||||||||||||  ||  ||||||||||||    
T  17190184 tttctagggtatgtttttatcttttatatcttgtttttagtt 17190225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 8878535 - 8878381
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| | ||||| |||| |  |||||||||||||||||| |||||||| || | ||   | ||||||||| ||||||||||  ||||||    
T  8878535 tctcactataaataccaaccttcctcataccaaatttctcgttcagaactatggcagttcaagacgatgacaactttggagcttcgggagagtttctatc 8878436  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||| ||||||||| |||| |||||||||||||| |||||||    
T  8878435 ttctccttgattttctacggtatgtttatatcattagtaatttgtttatagttac 8878381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 193 - 374
Target Start/End: Complemental strand, 10611295 - 10611106
Alignment:
Q  193 cgtttttaacccaaaccttgttataaatctc-attataaatactagccttcttcattcagaatttctcgttcagaact--------gtggcagtttaata 283  Q
    |||||||| ||||||||  |||| ||||||| | ||||||||| ||||||| ||||||||||||||||||||||||          ||| || || || |    
T  10611295 cgtttttagcccaaacccagttagaaatctccactataaatac-agccttcctcattcagaatttctcgttcagaaaatcagaaaagtgacatttcaaga 10611197  T
Q  284 tgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
     ||| || ||||||||| |||| ||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  10611196 ggaaggcaactttggagcttcgagagagaatctatcttctacttgattttttagggtatgtttttttctttagtaatttgtttttagttac 10611106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 124 - 312
Target Start/End: Complemental strand, 17078384 - 17078195
Alignment:
Q  124 atgcgccccaagcatctcaaaatgtaggggcgcaagcataactttattcctttttgttagtaaagcccacgtttttaacccaaaccttgttataaatctc 223  Q
    |||||||||||||||||||||    ||||| ||| || ||| ||||||| |||||||  |||| |||| |||||||| ||||||||  | || |||||||    
T  17078384 atgcgccccaagcatctcaaatgcaaggggtgcaggcgtaattttattcgtttttgtgggtaatgcccgcgtttttagcccaaacccagatagaaatctc 17078285  T
Q  224 -attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagaga 312  Q
     | ||||||||||||||||| || |||| |||||| |||||||||| ||||||||| || | ||| |||||||||||| |||||||||||    
T  17078284 cactataaatactagccttcctccttcataatttcacgttcagaaccgtggcagttcaagaggaaggctactttggagcttcgggagaga 17078195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 193 - 374
Target Start/End: Original strand, 3586052 - 3586233
Alignment:
Q  193 cgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagct 291  Q
    |||||||| ||||||||  |||| ||| ||||| ||||||||||||||||| |||||| ||| ||||| |||| |||||   |||||  | | ||| ||     
T  3586052 cgtttttagcccaaacccagttagaaactctcactataaatactagccttcctcattcggaaattctcattcaaaactgaatcagttctagaggaaggca 3586151  T
Q  292 actttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
     |||||||| ||| ||||||  | ||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  3586152 tctttggagcttcaggagagtttatattttctccttgattttctaggatatgtttttatctttagt-atttgtttttagttac 3586233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 1862072 - 1862007
Alignment:
Q  302 ttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttt 367  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  1862072 ttcgggagagaatctatcttctccatgattttctagggtatgattttatctttagtaatttgtttt 1862007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 245 - 374
Target Start/End: Complemental strand, 12330568 - 12330439
Alignment:
Q  245 cattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgt 344  Q
    |||| |||||||||||||||||| ||||| |||| || | |||||| | | | ||| ||| |  |||  ||||||||||||||||||||||| |||||||    
T  12330568 cattgagaatttctcgttcagaattgtgggagttcaagaggaaagcaattctagagcttccgaggagtttctatcttctccttgattttctacggtatgt 12330469  T
Q  345 ttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||| |||||||||||    
T  12330468 ttttatctttagtaatttatttttagttac 12330439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 314 - 374
Target Start/End: Complemental strand, 9134235 - 9134175
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9134235 tctatcttctccttgattttctagcgtatgtttttatctttagtaatttgtttttagttac 9134175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 6043629 - 6043517
Alignment:
Q  261 ttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaat 360  Q
    |||||||||||| ||||| || | ||| || ||||||||| |||  |||||  ||||||||| ||||||||||||||| |||||||||||||||||||||    
T  6043629 ttcagaactgtgacagttcaagaggaaggcaactttggagcttcatgagagtttctatcttccccttgattttctagg-tatgtttttatctttagtaat 6043531  T
Q  361 ttgtttttagttac 374  Q
    |||| |||||||||    
T  6043530 ttgtgtttagttac 6043517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 13288276 - 13288434
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatct--- 316  Q
    ||||| ||||||||| | ||||| ||||| |||||||||||||||||||||  |||||| || | ||| || ||||||||| |||  |||||  | |       
T  13288276 tctcactataaataccaaccttcctcattgagaatttctcgttcagaactggagcagttcaagaggaaggcaactttggagcttcatgagagtttttttt 13288375  T
Q  317 -atcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
     ||||||||||||||||| ||||||||| ||| ||||||||||||||||||||| ||||    
T  13288376 tatcttctccttgattttttagggtatgctttgatctttagtaatttgtttttaattac 13288434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 226 - 352
Target Start/End: Original strand, 13253231 - 13253357
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||  ||| ||| |||||| ||||| |||||| |||||| | ||| || || | ||| |  ||||||||| ||||||||||  ||||||||||||    
T  13253231 tataaatatcagcattcctcattctgaattcctcgtttagaactatagcaattcaagaggaaggtgactttggagcttcgggagagtttctatcttctcc 13253330  T
Q  326 ttgattttctagggtatgtttttatct 352  Q
    |||||||||||||||||||||||||||    
T  13253331 ttgattttctagggtatgtttttatct 13253357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 17078502 - 17078431
Alignment:
Q  15 tgaagacgaagacctaaaaacgacgaagataggagaaattggacccggaagcacacaagaatgcgcctaggg 86  Q
    |||||| ||||||||||||||||||||||| | ||||||||| ||| ||||| |||||||||||||||||||    
T  17078502 tgaagaggaagacctaaaaacgacgaagatcgaagaaattgggccctgaagctcacaagaatgcgcctaggg 17078431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 314 - 374
Target Start/End: Complemental strand, 4820329 - 4820270
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  4820329 tctatcttctccttgatttt-tagggcatgtttttatctttagtaatttgtttttatttac 4820270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 333 - 374
Target Start/End: Complemental strand, 11505700 - 11505659
Alignment:
Q  333 tctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  11505700 tctagggtatgtttttatctttagtaatttctttttagttac 11505659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 4450453 - 4450382
Alignment:
Q  15 tgaagacgaagacctaaaaacgacgaagataggagaaattggacccggaagcacacaagaatgcgcctaggg 86  Q
    |||||||||| ||||||||||||| ||||| | ||||||||| ||||||||||||  || ||||| ||||||    
T  4450453 tgaagacgaaaacctaaaaacgacaaagatcgaagaaattgggcccggaagcacaagagcatgcgtctaggg 4450382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 11505638 - 11505599
Alignment:
Q  335 tagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  11505638 tagggtatgtttttatctttagtaatttctttttagttac 11505599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 375
Target Start/End: Complemental strand, 17830721 - 17830671
Alignment:
Q  325 cttgattttctagggtatgtttttatctttagtaatttgtttttagttact 375  Q
    |||| |||||| | |||||||||||||||||||||||||| ||||||||||    
T  17830721 cttgtttttcttgagtatgtttttatctttagtaatttgtctttagttact 17830671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 11505578 - 11505539
Alignment:
Q  335 tagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  11505578 taggttatgtttttatctttagtaatttctttttagttac 11505539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 339 - 374
Target Start/End: Complemental strand, 17078176 - 17078141
Alignment:
Q  339 gtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||| |||||||||||||||||||||||||||||||    
T  17078176 gtatatttttatctttagtaatttgtttttagttac 17078141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 340 - 374
Target Start/End: Complemental strand, 9977768 - 9977734
Alignment:
Q  340 tatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||| ||||||    
T  9977768 tatgtttttatctttagtaatttgttttcagttac 9977734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 355
Target Start/End: Complemental strand, 15870755 - 15870714
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatcttta 355  Q
    ||||||||||||||  ||||||||||||| ||||||||||||    
T  15870755 tctatcttctcctttcttttctagggtatatttttatcttta 15870714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 39270604 - 39270641
Alignment:
Q  15 tgaagacgaagacctaaaaacgacgaagataggagaaa 52  Q
    ||||||||||||||||||||||||||| || |||||||    
T  39270604 tgaagacgaagacctaaaaacgacgaaaatcggagaaa 39270641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 7e-48; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 226 - 374
Target Start/End: Complemental strand, 24469276 - 24469130
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||   ||| |||||||| ||| || ||||||  |||||||||||||    
T  24469276 tataaatactagccttcctcattcagaatttctcgttcagaactgtggcagttcaagtggaaggctactttagagctttgggaga--atctatcttctcc 24469179  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24469178 ttgattttctagggtatgtttttatctttaataatttgtttttagttac 24469130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 14078340 - 14078494
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||||||||||||||||| ||  ||||||| ||||||||||| |||| |||||||||| || | ||| || ||||||||||||| ||||||  ||||||    
T  14078340 tctcattataaatactagcttttgtcattcataatttctcgtttagaattgtggcagttcaagaggaaggcaactttggagtttcaggagagtttctatc 14078439  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  14078440 ttctccttgattttctaggttatgtttttatctttagtaatttgtttttacttac 14078494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 17383226 - 17383073
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| || | ||| || ||||||||| || |||||||  ||||||    
T  17383226 tctcactataaataccagccttcctcatttagaatttctcgttcagaactgtggcagttcaaaaggaaggcaactttggagctttgggagagtttctatc 17383127  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  17383126 ttctccttgattttctaaggtatgtttttatctttagtaattt-tttttagttac 17383073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 229 - 374
Target Start/End: Original strand, 21846292 - 21846437
Alignment:
Q  229 aaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttg 328  Q
    |||||||||||||| ||||||| ||||||||||| |||| |||||||||| ||   ||| | |||||||||| ||||||||||| | |||||||||||||    
T  21846292 aaatactagccttcctcattcaaaatttctcgtttagaattgtggcagttcaagtggaaggatactttggagcttcgggagagagtttatcttctccttg 21846391  T
Q  329 attttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  21846392 attttctagggtatgtttttatctttaataatttgtttttagttac 21846437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 183 - 374
Target Start/End: Original strand, 20004748 - 20004940
Alignment:
Q  183 gtaaagcccacgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaa 281  Q
    |||||||||||  ||||| ||||||||  | || ||| ||||| ||||||||| ||||||| ||||| |||||||||| ||||||| | ||| |||| ||    
T  20004748 gtaaagcccacacttttagcccaaacccaggtagaaactctcactataaataccagccttcctcattaagaatttctctttcagaattatggaagttcaa 20004847  T
Q  282 tatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
     | ||| || ||||||||| || |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20004848 gacgaaggcaactttggagctttgggagagtttctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 20004940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 220 - 370
Target Start/End: Original strand, 14077826 - 14077976
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||||||||||||||||||||| ||||||||||  ||||||| |||||||||||| ||||| | |||  | ||||||||| ||| ||||||  ||||||    
T  14077826 tctcattataaatactagccttcgtcattcagaacatctcgtttagaactgtggcaatttaagaggaagacaactttggagcttcaggagagtttctatc 14077925  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttag 370  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  14077926 ttatccttgattttctaggttatgtttttatctttagtaatttgtttttag 14077976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 244 - 374
Target Start/End: Complemental strand, 9519235 - 9519104
Alignment:
Q  244 tcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatg 343  Q
    ||||||| || |||||||||||||||||||||||| || | ||| |||||||||||| ||||||||||  |||||||||||||||||||||||| |||||    
T  9519235 tcattcataaattctcgttcagaactgtggcagttcaaaaggaaggctactttggagcttcgggagagtttctatcttctccttgattttctagtgtatg 9519136  T
Q  344 tttttatc-tttagtaatttgtttttagttac 374  Q
    |||||||| |||||||||||||||||||||||    
T  9519135 tttttatcttttagtaatttgtttttagttac 9519104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 226 - 374
Target Start/End: Complemental strand, 24479523 - 24479377
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||   ||| |||||||| ||| || ||||||  |||||||||||||    
T  24479523 tataaataataaccttcctcattcagaatttctcgttcagaactgtggcagttcaagtagaaggctactttagagctttgggaga--atctatcttctcc 24479426  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  24479425 ttgattttctagggtatgtttttatctttaaaaatttgttttaagttac 24479377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 220 - 375
Target Start/End: Original strand, 17822615 - 17822770
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||||||||||| || |||| || ||||| |||||||||||||  ||| || | ||| || ||||||||| |||  |||||  ||||||    
T  17822615 tctcactataaatactagccttcctcgttcataaattctctttcagaactgtggatgttcaagaggaaggcaactttggagcttcatgagagtttctatc 17822714  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttact 375  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17822715 tgctccttgattttctagggtatgtttttatctttagtaatttgtttttagttact 17822770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 220 - 354
Target Start/End: Complemental strand, 11193169 - 11193035
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| |||||||| | || ||| ||||||||||||||| |||||||||||  |||||| || ||||| |||||||||||| ||| ||||||||||||||    
T  11193169 tctcactataaatatttgcattcctcattcagaatttctggttcagaactgaagcagttcaagatgaaggctactttggagcttcaggagagaatctatc 11193070  T
Q  320 ttctccttgattttctagggtatgtttttatcttt 354  Q
    ||||||||||||||||||||||||| |||||||||    
T  11193069 ttctccttgattttctagggtatgtgtttatcttt 11193035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 124 - 338
Target Start/End: Original strand, 21840611 - 21840826
Alignment:
Q  124 atgcgccccaagcatctcaaaatgtaggggcgcaagcataactttattcctttttgttagtaaagcccacgtttttaacccaaaccttgttataaatctc 223  Q
    |||||||||||||||| |||||||  ||||||||| | | | ||||||| ||||| |  ||  ||||| |||||||| |||| |||  |||| |||||||    
T  21840611 atgcgccccaagcatcacaaaatgcgggggcgcaatcgtcattttattcgtttttctgggtttagcccgcgtttttagcccatacccagttagaaatctc 21840710  T
Q  224 -attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttc 322  Q
     | ||||||||||||||||| || |||| |||||| ||||| |||||||| ||||| || | ||| |||||||||||| ||||||||||| |||||||||    
T  21840711 gactataaatactagccttcctcgttcataatttcccgttcggaactgtgacagttcaagaggaaggctactttggagcttcgggagagagtctatcttc 21840810  T
Q  323 tccttgattttctagg 338  Q
    || |||||||||||||    
T  21840811 tctttgattttctagg 21840826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 226 - 354
Target Start/End: Complemental strand, 12988712 - 12988584
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||  |||||||||||||||||||||||||||||||||||  |||||| || | |||||||||||||||| |||  |||||||| ||| |||||     
T  12988712 tataaatatcagccttcttcattcagaatttctcgttcagaactgaagcagttcaagaggaaagctactttggagcttcttgagagaatttatattctct 12988613  T
Q  326 ttgattttctagggtatgtttttatcttt 354  Q
    || ||||||||||||||||||||||||||    
T  12988612 ttaattttctagggtatgtttttatcttt 12988584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 22849364 - 22849518
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||||| ||||  |||||| |||||||||||||||||||||||||| | || | |||    ||||||||| ||| |||||   ||||||    
T  22849364 tctcactataaatactatcctttctcattccgaatttctcgttcagaactgtggcagctcaagaggaagaaaactttggagcttcaggagattttctatc 22849463  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  22849464 ttctcctttattttctagggtatgtttttatctttagcaatttgcttttagttac 22849518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 226 - 354
Target Start/End: Complemental strand, 13021841 - 13021713
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||  ||||||||||||||||||||||| ||||| ||||   | |||| || | |||||||||||||||| ||| |||||||||||||||||||     
T  13021841 tataaatatcagccttcttcattcagaatttctagttcaaaactaaagtagttcaagaggaaagctactttggagcttccggagagaatctatcttctct 13021742  T
Q  326 ttgattttctagggtatgtttttatcttt 354  Q
    ||||||||||||||||| |||||||||||    
T  13021741 ttgattttctagggtatctttttatcttt 13021713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 270 - 374
Target Start/End: Original strand, 19578159 - 19578263
Alignment:
Q  270 gtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgttttta 369  Q
    ||||||||| || ||||| || ||||||||| ||||||||||  |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  19578159 gtggcagttcaagatgaaggcaactttggagcttcgggagagtttctatcttctccttgattatctagagtatgtttttatctttagtaatttgttttta 19578258  T
Q  370 gttac 374  Q
    |||||    
T  19578259 gttac 19578263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 270 - 374
Target Start/End: Original strand, 19594600 - 19594704
Alignment:
Q  270 gtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgttttta 369  Q
    ||||||||| || ||||| || ||||||||| ||||||||||  |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  19594600 gtggcagttcaagatgaaggcaactttggagcttcgggagagtttctatcttctccttgattatctagagtatgtttttatctttagtaatttgttttta 19594699  T
Q  370 gttac 374  Q
    |||||    
T  19594700 gttac 19594704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 244 - 374
Target Start/End: Original strand, 23007125 - 23007255
Alignment:
Q  244 tcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatg 343  Q
    ||||||| ||||||| |||||||||||| | ||||  | ||||  || ||||||||| ||||||||||  ||||||| |||||||  |||||||||||||    
T  23007125 tcattcataatttcttgttcagaactgtagtagttccacatgagggcgactttggagcttcgggagagtttctatctgctccttgtgtttctagggtatg 23007224  T
Q  344 tttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||    
T  23007225 tttttatctttagtaatttgtttttagttac 23007255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 244 - 374
Target Start/End: Complemental strand, 23781239 - 23781109
Alignment:
Q  244 tcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatg 343  Q
    ||||||| ||||||| |||||||||||| | ||||  | ||||  || ||||||||| ||||||||||  ||||||| |||||||  |||||||||||||    
T  23781239 tcattcataatttcttgttcagaactgtagtagttccacatgagggcgactttggagcttcgggagagtttctatctgctccttgtgtttctagggtatg 23781140  T
Q  344 tttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||    
T  23781139 tttttatctttagtaatttgtttttagttac 23781109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 244 - 374
Target Start/End: Complemental strand, 14638775 - 14638645
Alignment:
Q  244 tcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatg 343  Q
    ||||||| ||||||| |||||||||| |||||||| || | ||| |||||||||||  ||  ||||||  ||||||||||||||||||||||| | ||||    
T  14638775 tcattcaaaatttctggttcagaactatggcagttcaagaggaaggctactttggatctttaggagagtttctatcttctccttgattttctatgatatg 14638676  T
Q  344 tttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||| || ||||||||||    
T  14638675 tttttatctttagtaatatggttttagttac 14638645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 22411910 - 22412064
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||  ||||||| |||||||||| ||||||||||||||||| ||| || || | ||| || ||||  ||| ||||||||||  | ||||    
T  22411910 tctcactataaatatcagccttcctcattcagaaattctcgttcagaactgtagcaattcaagaggaaggcgacttccgagcttcgggagagtttatatc 22412009  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||| |||||||||| || ||||||||||||||||| |||||||||||| |||||    
T  22412010 ttcttcttgattttccagtgtatgtttttatctttattaatttgtttttggttac 22412064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 314 - 372
Target Start/End: Complemental strand, 8066115 - 8066057
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtt 372  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8066115 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtt 8066057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 253 - 375
Target Start/End: Original strand, 27123445 - 27123567
Alignment:
Q  253 atttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatct 352  Q
    |||| ||||||| || ||||||| || || | ||| || ||||||||| |||||||||   ||| || ||| |||||||||||||||||||||||| |||    
T  27123445 atttttcgttcaaaattgtggcatttcaagaggaaggcaactttggagcttcgggagactttctttcctcttcttgattttctagggtatgtttttctct 27123544  T
Q  353 ttagtaatttgtttttagttact 375  Q
    |||||||||||||||||||||||    
T  27123545 ttagtaatttgtttttagttact 27123567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 217 - 367
Target Start/End: Complemental strand, 14075974 - 14075822
Alignment:
Q  217 aaatctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaa--gctactttggagtttcgggagagaat 314  Q
    ||||| || ||| |||| |||||||| ||||||| || |||| |||||||||| |||||||| |  |  |||  || | ||||||| ||| ||||||  |    
T  14075974 aaatcacactatcaatattagccttcctcattcataaattctggttcagaactttggcagttaagaaaaaaaaggcaattttggagcttcaggagagttt 14075875  T
Q  315 ctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttt 367  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  14075874 ctatattctccttgattttctagagtatgtttttatctttagtaatttgtttt 14075822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 21153135 - 21153191
Alignment:
Q  318 tcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21153135 tcttctccttgattttctagggtatgtttttatctttagtaatttgtttttatttac 21153191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 1636198 - 1636047
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactt-tggagtttcgggagagaatctat 318  Q
    ||||||||||||||| | ||||| |||||||||| |||| |||||||||||  ||||||||| | |||||  | || | ||| |||    |||  |||||    
T  1636198 tctcattataaataccaaccttcctcattcagaacttcttgttcagaactggagcagtttaaga-gaaaggcatttctagagcttcataggagtttctat 1636100  T
Q  319 cttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1636099 ctt---cttgattttctagggtatgtttttatctttagtaatttgtttttagttac 1636047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 22409240 - 22409300
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  22409240 tctatattctccttaattttttagggtatgtttttatctttagtaatttgtttttagttac 22409300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 316 - 374
Target Start/End: Complemental strand, 14723078 - 14723020
Alignment:
Q  316 tatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||    
T  14723078 tatcttctccttgattttctagggtatgtttttatcatttgtaatttgttttttgttac 14723020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 314 - 368
Target Start/End: Original strand, 18074312 - 18074366
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgttttt 368  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  18074312 tctatcttctctttgtttttctagggtatgtttttatctttagtaatttgttttt 18074366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 9840461 - 9840404
Alignment:
Q  315 ctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtt 372  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||||| |||||||    
T  9840461 ctatcctctccttgtttgtctagggtatgtttttatctttagtaatttgtctttagtt 9840404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 661 - 725
Target Start/End: Complemental strand, 21862980 - 21862917
Alignment:
Q  661 acaagcatcaaccataaatcttacacatcttcttgtgtacctaaaaatgttggtgtaaggggtca 725  Q
    |||||||| |||||| ||||||   ||||||||||||||||| ||||||||||||||||||||||    
T  21862980 acaagcattaaccatcaatcttgtgcatcttcttgtgtacct-aaaatgttggtgtaaggggtca 21862917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 220 - 278
Target Start/End: Original strand, 22404830 - 22404888
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtt 278  Q
    ||||| ||||||||||||||||  ||||| ||||||||||||||||||| |||| ||||    
T  22404830 tctcactataaatactagccttactcatttagaatttctcgttcagaaccgtggtagtt 22404888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 18074217 - 18074266
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaact 269  Q
    ||||| ||||||||| ||||||| || |||||||||||||||||||||||    
T  18074217 tctcactataaataccagccttcctcgttcagaatttctcgttcagaact 18074266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 349
Target Start/End: Original strand, 20144058 - 20144091
Alignment:
Q  316 tatcttctccttgattttctagggtatgttttta 349  Q
    ||||||||||||||||||||||||||||||||||    
T  20144058 tatcttctccttgattttctagggtatgttttta 20144091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 349
Target Start/End: Complemental strand, 22188781 - 22188748
Alignment:
Q  316 tatcttctccttgattttctagggtatgttttta 349  Q
    ||||||||||||||||||||||||||||||||||    
T  22188781 tatcttctccttgattttctagggtatgttttta 22188748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 8066236 - 8066158
Alignment:
Q  193 cgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactg 270  Q
    |||||||||||||||||| |||| ||| ||||  || ||||||||||||||  |||||| |||||||| |||| |||||    
T  8066236 cgtttttaacccaaacctagttagaaactctcgctacaaatactagccttccacattcaaaatttctcattcataactg 8066158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 8038655 - 8038716
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatc-tttagtaatttgtttttagttac 374  Q
    ||||||||||| ||| |||||||||||||| ||||||| |||| |||||||| || ||||||    
T  8038655 tctatcttctcattgtttttctagggtatgattttatcttttactaatttgtcttcagttac 8038716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 93; Significance: 7e-45; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 183 - 374
Target Start/End: Original strand, 102213 - 102405
Alignment:
Q  183 gtaaagcccacgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaa 281  Q
    ||||||||| |  ||||||||||||||  | || ||| ||||| ||||||||||||||||| || ||||||| |||||||||||||||||||||||| ||    
T  102213 gtaaagcccgcacttttaacccaaacccaggtagaaactctcactataaatactagccttcctccttcagaaattctcgttcagaactgtggcagttcaa 102312  T
Q  282 tatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
     | ||| || |||||||||||| |||||||  |||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  102313 gaggaaggcaactttggagttttgggagagtttctatcttcttcttgattttctagagtatatttttatcgttagtaatttgtttttagttac 102405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 1e-43; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 176 - 373
Target Start/End: Original strand, 16244538 - 16244736
Alignment:
Q  176 tttgttagtaaagcccacgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggc 274  Q
    ||||| ||||||||||||||||||| |||||| |  |||| ||| ||||| ||||||||||||||||  ||||||||||||| ||||||| |||||||||    
T  16244538 tttgtgagtaaagcccacgtttttagcccaaatccagttagaaactctcactataaatactagccttgctcattcagaatttttcgttcaaaactgtggc 16244637  T
Q  275 agtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtta 373  Q
    |||| || | ||| || | | | ||||||| | ||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16244638 agttcaagaggaaggcaattctagagtttcagaagagtttttatcttctccttgattttctagggtatgtttttatctttaggaatttgtttttagtta 16244736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 19575096 - 19575250
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||||| ||| |  |||||| || | ||| || ||||||||| |||||||||   ||||||    
T  19575096 tctcactataaataccagccttcctcattcagaatttctcgttcaaaaccgcagcagttcaagaggaaggcaactttggagcttcgggagaatttctatc 19575195  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19575196 ttctccttgattttctagtgtatgtttttatctttagtaatttgtttttagttac 19575250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 14977302 - 14977148
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| || |||||| || |||| ||||||| |||||||| |||||||||||||||||| ||   ||| || ||||||||| ||||||||||  ||||||    
T  14977302 tctcactacaaataccagtcttcctcattcaaaatttctcattcagaactgtggcagttcaaggggaaggcaactttggagcttcgggagagtgtctatc 14977203  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  14977202 ttctccttgattttctagggtatgttttcatctttagtaatttatttttagttac 14977148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 149 - 374
Target Start/End: Original strand, 19170627 - 19170853
Alignment:
Q  149 aggggcgcaagcataactttattcctttttgttagtaaagcccacgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcat 247  Q
    |||||| || |||||| |||||   |||||||| | ||||||| |||||||| |||||| |  |||| ||| ||||| ||||||||||| | ||| ||||    
T  19170627 aggggctcatgcataattttatgtttttttgttggcaaagcccgcgtttttagcccaaatccagttagaaactctcactataaatactacctttcctcat 19170726  T
Q  248 tcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttt 347  Q
    ||| | ||||||||||||||||||||||||| || | |||  | | ||||||| | | ||||||  ||||||||||||||||||||||||||||||||||    
T  19170727 tcatattttctcgttcagaactgtggcagttcaagaggaagccaaatttggagctccaggagagtttctatcttctccttgattttctagggtatgtttt 19170826  T
Q  348 tatctttagtaatttgtttttagttac 374  Q
    | ||| |||||||||||||||||||||    
T  19170827 tttctatagtaatttgtttttagttac 19170853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 224 - 370
Target Start/End: Original strand, 25851563 - 25851708
Alignment:
Q  224 attataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttct 323  Q
    ||||||||||| || |||||||||| |||| |||||||||||||||||||||||| || | ||| || ||||||||| |||||||  |  ||||||||||    
T  25851563 attataaataccagtcttcttcatttagaaattctcgttcagaactgtggcagttcaagaggaaggcaactttggagcttcgggatggtttctatcttct 25851662  T
Q  324 ccttgattttctagggtatgtttttatctttagtaatttgtttttag 370  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  25851663 ccttgattttctagggtat-tttttatctttagtaatttgtttttag 25851708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 174 - 374
Target Start/End: Original strand, 2166493 - 2166694
Alignment:
Q  174 tttttgttagtaaagcccacgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtg 272  Q
    |||||||  ||||||||||| |||| ||||||||||  |||| ||| ||||| ||||||||| || |||| ||||||||||||||| ||||| |||||||    
T  2166493 tttttgtgggtaaagcccacattttaaacccaaacccagttagaaactctcactataaatacaagtcttcctcattcagaatttcttgttcaaaactgtg 2166592  T
Q  273 gcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtt 372  Q
    |||||| || | ||| || | | | ||| ||||   |||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2166593 gcagttcaagaggaaggcaattctagagcttcgaaggagtttctatattctccttgattttctagggtatgtttttatctttagtaatttgtttttagtt 2166692  T
Q  373 ac 374  Q
    ||    
T  2166693 ac 2166694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 244 - 375
Target Start/End: Complemental strand, 8171209 - 8171078
Alignment:
Q  244 tcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatg 343  Q
    |||||||||||||||||||||||||||    ||||||| | ||| || ||||||||| ||||||||||  ||||||||| ||||||||||||||||||||    
T  8171209 tcattcagaatttctcgttcagaactggaaaagtttaagaggaaggcaactttggagcttcgggagagtttctatcttccccttgattttctagggtatg 8171110  T
Q  344 tttttatctttagtaatttgtttttagttact 375  Q
    |||||||||||||||||||| |||||||||||    
T  8171109 tttttatctttagtaatttgcttttagttact 8171078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 20022446 - 20022600
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| | | ||| ||||||||||||||||||| |||||||| |||||| || | ||| || ||||||||  ||||||||||  | ||||    
T  20022446 tctcactataaataccaactttcctcattcagaatttctcgttgagaactgtagcagttcaaaaggaaggcgactttggaacttcgggagagtttttatc 20022545  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||||||||    
T  20022546 ttctcatttattttctagggtatgtttttatctttagtaatttgtgtttagttac 20022600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 190 - 374
Target Start/End: Complemental strand, 19910664 - 19910482
Alignment:
Q  190 ccacgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaa 288  Q
    ||||||||||||||||||||  |||| ||| ||| | ||||||||| |  |||| |||||||||||||||| || |||||| |||||||| || | |||     
T  19910664 ccacgtttttaacccaaaccaagttagaaactcttactataaataccaatcttcctcattcagaatttctctttgagaactatggcagttcaagaggaag 19910565  T
Q  289 gctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    || |||||| || || |||||||  ||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19910564 gcaactttgcagctttgggagagtttctatcttct---tgattttctagggtatgtttttatctttaataatttgtttttagttac 19910482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 226 - 373
Target Start/End: Complemental strand, 41509698 - 41509551
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||| |  |||| || |||| ||||||||||||||||||||||||||| || | ||| || | | | ||| |||||  |||  ||||||||||||    
T  41509698 tataaataccattcttcctcgttcataatttctcgttcagaactgtggcagttcaagaggaaggcaattctagagcttcggaggagtttctatcttctcc 41509599  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagtta 373  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41509598 ttgattttctagggtatgtttttatctttagtaatttgtttttagtta 41509551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 19533331 - 19533177
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| | ||||| |||||||||||  ||||||||||||||  |||||| || | ||| | |||||||||| ||||||||||  ||||||    
T  19533331 tctcactataaataccatccttcctcattcagaatcgctcgttcagaactgaagcagttcaagaggaagggtactttggagcttcgggagagtttctatc 19533232  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||| ||||||||||||||||  ||  ||||||||||||||    
T  19533231 ttctccttgattttctagtgtatgtttttatcttttatatcttgtttttagttac 19533177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 19909567 - 19909721
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    |||||| |||||||| | ||||  ||||||||||||||| |||||||||||  |||||| || | |||  | | ||||||| ||| ||||||  ||||||    
T  19909567 tctcataataaataccaaccttactcattcagaatttcttgttcagaactggagcagttcaagaggaagacgattttggagcttcaggagagtttctatc 19909666  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  19909667 ttctccttgattttctagggtatgtttttatctttagtaatttgtgattagttac 19909721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 226 - 367
Target Start/End: Complemental strand, 19169609 - 19169468
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||  ||||||  |||||||||||||||| ||||||||||  |||||| || | ||| || |||||| || ||| ||||||  | ||||||||||    
T  19169609 tataaatatcagcctttctcattcagaatttctcattcagaactggagcagttcaagaggaaggcaactttgaagcttccggagagtttttatcttctcc 19169510  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttt 367  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19169509 ttgattttctagggtatgtttttatctttagtaatttgtttt 19169468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 20121894 - 20122007
Alignment:
Q  261 ttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaat 360  Q
    ||||||||||||| | || || | ||| ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20121894 ttcagaactgtggaaattcaagaggaaggctacttaggagcttcaggagagaatctatcttctccttgattttctagggtatgtttttatctttagtatt 20121993  T
Q  361 ttgtttttagttac 374  Q
    || |||||||||||    
T  20121994 ttatttttagttac 20122007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 220 - 373
Target Start/End: Original strand, 27413195 - 27413348
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| ||||||  ||||||| |||| ||||||||||||||  ||| || || | ||| |||||||||||| ||||||||||  ||||||    
T  27413195 tctcactataaataccagcctttctcattcataattactcgttcagaactggagcaattcaagaggaaggctactttggagcttcgggagagtgtctatc 27413294  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagtta 373  Q
    |||||||| ||||||||| |||||||||||||| |  ||  |||||||||||||    
T  27413295 ttctccttcattttctagagtatgtttttatctattatatcttgtttttagtta 27413348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 226 - 374
Target Start/End: Original strand, 8882003 - 8882143
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||| ||||||| ||||||||||||||      |||||||  | |||| || ||||| || | ||||||| ||| ||||||  ||||||||||||    
T  8882003 tataaataccagccttcctcattcagaatttc------agaactgcagtagttcaaaatgaaggcgattttggagcttcaggagagtttctatcttctcc 8882096  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  8882097 ttgattttctagggtatgtttttatctttagtaatt--tttttagttac 8882143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 16228958 - 16229040
Alignment:
Q  292 actttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||| || ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  16228958 actttgcagcttcgggagagtttctatcttctccttgattttctatggtatgtttttatctttagtaatttgcttttagttac 16229040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 18457730 - 18457883
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||||||||||||  ||  ||| |||||||| |||||||||||| ||   | |||||| || | |||  | ||||||||| |||| |||||  ||||||    
T  18457730 tctcattataaatataagttttcgtcattcaggatttctcgttcaaaatcttcgcagttcaagaggaagacaactttggagcttcgagagagtttctatc 18457829  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
     |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18457830 ctctccttgattttctagggtatgtttttatctttagtaattt-tttttagttac 18457883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 193 - 374
Target Start/End: Complemental strand, 21302929 - 21302755
Alignment:
Q  193 cgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagct 291  Q
    ||||||||||| |||||| |||| ||| ||||  ||||||||||||||||  ||||||||||||||         |||||||||||| || | ||| ||     
T  21302929 cgtttttaaccgaaacctagttagaaactctccctataaatactagcctttctcattcagaatttc---------actgtggcagttcaagaggaatgca 21302839  T
Q  292 actttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatc-tttagtaatttgtttttagttac 374  Q
    ||||||||| ||| ||| ||  | ||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||    
T  21302838 actttggagcttcaggatagtttatatcttctccttgatttacgagggtatgtttttatcttttagtaatttgtttttagttac 21302755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 502 - 732
Target Start/End: Original strand, 34157661 - 34157886
Alignment:
Q  502 gaacaaaagtgaaacttgtgtgaagtttctagcggaagataacatgtctccacatttctaaacatactaaatagttcaaagcaacaattaaagaagcaaa 601  Q
    |||||| ||||||||| || | ||||| |||| ||||| ||||  |  ||| |||||| |||  ||||||||| ||||||  ||||| ||||||| || |    
T  34157661 gaacaatagtgaaactagtctaaagttcctagtggaagctaactcgcttccgcatttccaaatgtactaaataattcaaaataacaactaaagaaacata 34157760  T
Q  602 aagaaaatccttatttcaaaatagatgacgaaaacccaatgtgatttccccgttcccgaacaagcatcaaccataaatcttacacatcttcttgtgtacc 701  Q
    ||    || ||||||| ||| |||||||| ||||||||  ||| |||  || ||| || ||||||||||||||| |||||||  ||||| |||| |||||    
T  34157761 aa----attcttattttaaagtagatgacaaaaacccatagtgttttttccattcgcggacaagcatcaaccatcaatcttatgcatctccttgagtacc 34157856  T
Q  702 taaaaatgttggtgtaaggggtcagcttcca 732  Q
    | |||||||||||||||||||||||||||||    
T  34157857 t-aaaatgttggtgtaaggggtcagcttcca 34157886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 195 - 374
Target Start/End: Complemental strand, 20431003 - 20430823
Alignment:
Q  195 tttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctac 293  Q
    |||||| ||||||||| |||| ||| ||||| || |||||||||||||| |||||||||||||| | ||  ||||||||  |||| || | ||| |  |     
T  20431003 tttttagcccaaacctagttagaaactctcactagaaatactagccttcctcattcagaatttcgcatttggaactgtgatagttcaaaaggaaggtaat 20430904  T
Q  294 tttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    | | ||| |||||  |||  ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  20430903 tctagagcttcggaggagtttctatattctccttgattttcaatagtatgtttttatctttagtaatttgtttttagttac 20430823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 317 - 374
Target Start/End: Original strand, 9780877 - 9780934
Alignment:
Q  317 atcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  9780877 atcttctccttgattttctagggtatgtttttagctttagtaatttatttttagttac 9780934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 12372938 - 12372998
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||    
T  12372938 tctatcttctccttgtttttctagggtatgtttttatctttagtaatttgtctttatttac 12372998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 8115819 - 8115973
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| | | ||| ||||||||||||||| |||||||||||  |||||| || | |||  | | | | ||| |||||  |||  ||||||    
T  8115819 tctcactataaataccaactttcctcattcagaatttcttgttcagaactggagcagttcaagaggaagacaattctagagcttcggaggagtttctatc 8115918  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
     |||||||  ||||||||||||||||||||||||||||||||| ||||| |||||    
T  8115919 atctccttatttttctagggtatgtttttatctttagtaattttttttttgttac 8115973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 290 - 354
Target Start/End: Original strand, 11636517 - 11636581
Alignment:
Q  290 ctactttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatcttt 354  Q
    ||||||||||  ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  11636517 ctactttggatattcgggagagagtctatcttttccttgattttttagggtatgtttttatcttt 11636581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 374
Target Start/End: Complemental strand, 8144616 - 8144555
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatc-tttagtaatttgtttttagttac 374  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||||||||||| |||||||||    
T  8144616 tctatcttctccttgtttttctagggcatgtttttatcttttagtaatttgtctttagttac 8144555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 31284955 - 31285016
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatc-tttagtaatttgtttttagttac 374  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||||||||| |||||||||    
T  31284955 tctatcttctccttgtttttctagggtatatttttatcttttagtaatttgtctttagttac 31285016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 605 - 730
Target Start/End: Complemental strand, 5153457 - 5153333
Alignment:
Q  605 aaaatccttatttcaaaatagatgacgaaaacccaatgtgatttccccgttcccgaacaagcatcaaccataaatcttacacatcttcttgtgtacctaa 704  Q
    ||||| |||||||  || |||||||  ||||||||  ||| ||| ||||||| || ||||||||| ||||| |||||||  | ||| |||| ||||||||    
T  5153457 aaaattcttattttcaagtagatgataaaaacccatagtgttttacccgttcgcggacaagcatcgaccatcaatcttatgcgtctccttgagtacctaa 5153358  T
Q  705 aaatgttggtgtaaggggtcagcttc 730  Q
    || ||||||||||| |||||||||||    
T  5153357 aa-tgttggtgtaaagggtcagcttc 5153333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 27073461 - 27073381
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggag 300  Q
    ||||| ||||||||||  ||||| |||||||||||||||||||||||||||  |||||| || | ||| || |||||||||    
T  27073461 tctcactataaatactgaccttcctcattcagaatttctcgttcagaactggagcagttcaagaggaaggcaactttggag 27073381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 8144907 - 8144789
Alignment:
Q  149 aggggcgcaagcataactttattcctttttgttagtaaagcccacgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcat 247  Q
    ||||||||| || ||||||||| | |||| ||  ||||||||  |||||||| ||||||||  |||| ||| ||||| ||||| ||||||||||| ||||    
T  8144907 aggggcgcatgcgtaactttatacgtttt-gtgggtaaagcctgcgtttttagcccaaacccagttagaaactctcactataattactagccttcctcat 8144809  T
Q  248 tcagaatttctcgttcagaa 267  Q
    ||| |||| |||||||||||    
T  8144808 tcataattgctcgttcagaa 8144789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 18735958 - 18736005
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatt 361  Q
    ||||||||||| |||||||||| ||||||||| |||||||||||||||    
T  18735958 tctatcttctctttgattttctggggtatgttgttatctttagtaatt 18736005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 316 - 374
Target Start/End: Original strand, 23699104 - 23699163
Alignment:
Q  316 tatcttctccttgattttctagggtatgtttttatc-tttagtaatttgtttttagttac 374  Q
    ||||||||||||  ||||||| || ||||||||||| |||||||||||||||||||||||    
T  23699104 tatcttctccttctttttctatggcatgtttttatcttttagtaatttgtttttagttac 23699163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 316 - 374
Target Start/End: Original strand, 23717559 - 23717618
Alignment:
Q  316 tatcttctccttgattttctagggtatgtttttatc-tttagtaatttgtttttagttac 374  Q
    ||||||||||||  ||||||| || ||||||||||| |||||||||||||||||||||||    
T  23717559 tatcttctccttctttttctatggcatgtttttatcttttagtaatttgtttttagttac 23717618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 316 - 374
Target Start/End: Original strand, 23736015 - 23736074
Alignment:
Q  316 tatcttctccttgattttctagggtatgtttttatc-tttagtaatttgtttttagttac 374  Q
    ||||||||||||  ||||||| || ||||||||||| |||||||||||||||||||||||    
T  23736015 tatcttctccttctttttctatggcatgtttttatcttttagtaatttgtttttagttac 23736074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 12771871 - 12771933
Alignment:
Q  314 tctatcttctccttgattttctag--ggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||| ||||||||||||   | ||||||||||||| ||||||||| |||||||||||    
T  12771871 tctatcttcttcttgattttctatatgatatgtttttatctatagtaatttatttttagttac 12771933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 18747586 - 18747515
Alignment:
Q  15 tgaagacgaagacctaaaaacgacgaagataggagaaattggacccggaagcacacaagaatgcgcctaggg 86  Q
    ||||||||||||||||||||||||||||||   || ||||||  ||| ||||||| ||| ||||||| ||||    
T  18747586 tgaagacgaagacctaaaaacgacgaagatccaagcaattgggtccgaaagcacaaaagcatgcgccgaggg 18747515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 374
Target Start/End: Original strand, 23755062 - 23755121
Alignment:
Q  316 tatcttctccttgattttctagggtatgtttttatc-tttagtaatttgtttttagttac 374  Q
    ||||||||||||  ||||||| || ||||||||||| |||| ||||||||||||||||||    
T  23755062 tatcttctccttctttttctatggcatgtttttatcttttattaatttgtttttagttac 23755121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 12372839 - 12372889
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactg 270  Q
    ||||| ||||||||| || |||||||||||| ||||||||||||| |||||    
T  12372839 tctcactataaataccagtcttcttcattcacaatttctcgttcacaactg 12372889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 21303106 - 21303069
Alignment:
Q  15 tgaagacgaagacctaaaaacgacgaagataggagaaa 52  Q
    ||||||||||||||||||||||||||| || |||||||    
T  21303106 tgaagacgaagacctaaaaacgacgaaaatcggagaaa 21303069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 226 - 374
Target Start/End: Complemental strand, 16783 - 16635
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||||||||||| ||||||| ||||| ||||||||| |||||||||||  | | ||| |||||||||||| |||  || |||| |||| ||||||    
T  16783 tataaatactagccttcctcattcataatttgtcgttcagatctgtggcagttcgagaggaaggctactttggagcttcatgaaagaagctattttctcc 16684  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16683 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 16635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 85; Significance: 4e-40; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 226 - 374
Target Start/End: Complemental strand, 4357 - 4209
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||||||||||| ||||||| ||||||| |||||| ||||  |||||| || | | | ||||||||||||  ||||| |||||||||| ||||||    
T  4357 tataaatactagccttcctcattcacaatttcttgttcaggactgaagcagttcaagaggtaggctactttggagcatcgggcgagaatctattttctcc 4258  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4257 ttgattttctagggtatgtttttatctttagtagtttgtttttagttac 4209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 83; Significance: 6e-39; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 22507 - 22353
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| ||||||||| ||||||| ||||||||| |||||||||||||||||||| |||| || | ||| |  ||||| ||| || |||||||  ||||||    
T  22507 tctcactataaataccagccttcctcattcagagtttctcgttcagaactgtggaagttcaagaggaaggaaacttttgagctttgggagagtttctatc 22408  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  22407 ttctcctttattttctagggtatgtttttatctttagtaatttgtttttaattac 22353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 244 - 374
Target Start/End: Complemental strand, 53993 - 53863
Alignment:
Q  244 tcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgattttctagggtatg 343  Q
    |||||||||||||||||||||||||| ||  |||| || | ||| || ||||||||| ||||||||||  |||||||| || ||||||||||||||||||    
T  53993 tcattcagaatttctcgttcagaactatgatagttaaagaggaaggcaactttggagcttcgggagagtttctatcttttctttgattttctagggtatg 53894  T
Q  344 tttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||||||||||    
T  53893 tttttatctttagtaatttgtttttagttac 53863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 79; Significance: 2e-36; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 5256 - 5102
Alignment:
Q  220 tctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatc 319  Q
    ||||| |||||||||||| |||| | ||||| |||||||||||||||| | |||||||| || | ||| || ||||||||| ||  ||||||  ||||||    
T  5256 tctcactataaatactagtcttcctaattcataatttctcgttcagaattttggcagttcaagaagaaggcaactttggagctttaggagagtttctatc 5157  T
Q  320 ttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    | |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5156 tactccttgattttctagggtatgattttatctttagtaatttgtttttagttac 5102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 226 - 373
Target Start/End: Complemental strand, 2921 - 2775
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||  ||| || || | ||| || ||||||||| ||||||||||  |  |||||||||    
T  2921 tataaatactagccttcctcattcataatttctcgttcagaactggagcaattcaagaggaaggcaactttggagcttcgggagagttttaatcttctcc 2822  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagtta 373  Q
    || |||||||||||||||||||||||||||||||||| ||||||||||    
T  2821 ttaattttctagggtatgtttttatctttagtaattt-tttttagtta 2775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 232 - 374
Target Start/End: Complemental strand, 81244 - 81103
Alignment:
Q  232 tactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctccttgatt 331  Q
    ||||| ||||| ||||| ||||||||||||||  ||||   ||| || || | ||| ||||||||||||||| |||||||||||||||||||||||||||    
T  81244 tactaaccttcctcatttagaatttctcgttctaaactaaagca-ttcaagaggaaggctactttggagttttgggagagaatctatcttctccttgatt 81146  T
Q  332 ttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||||||||||||||||||||||||  |||||||||||    
T  81145 ttctagggtatgtttttatctttagtaattattttttagttac 81103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 226 - 374
Target Start/End: Complemental strand, 73190 - 73043
Alignment:
Q  226 tataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatctatcttctcc 325  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||  |||||||| || | |||    || |||||| ||| ||||||  | ||||||||||    
T  73190 tataaataccagccttcctcattccgaatttctcgttcagaaccatggcagttcaagaggaagaaaacattggagcttcaggagagttt-tatcttctcc 73092  T
Q  326 ttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||    
T  73091 ttgattttctagggtatgtttttaactttagtaatttttttttagttac 73043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 11918 - 11836
Alignment:
Q  292 actttggagtttcgggagagaatctatcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||  ||| ||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  11918 actttggatcttcaggagagtttctatcttctccttgattttctagggtatgtttttatcattagtaatttgtttttatttac 11836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 151 - 278
Target Start/End: Complemental strand, 21107 - 20979
Alignment:
Q  151 gggcgcaagcataactttattcctttttgttagtaaagcccacgtttttaacccaaaccttgttataaa-tctcattataaatactagccttcttcattc 249  Q
    ||||||| || ||| ||||| | |||||||  ||||||||| |||||||| |||||||   || | ||| ||||| ||||||||||||||||| |||||     
T  21107 gggcgcatgcgtaattttatgcttttttgtgggtaaagcccgcgtttttagcccaaactcagtcagaaactctcactataaatactagccttcctcattt 21008  T
Q  250 agaatttctcgttcagaactgtggcagtt 278  Q
    | ||||| |||||||||||||||||||||    
T  21007 ataatttttcgttcagaactgtggcagtt 20979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1156 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1156
Description:

Target: scaffold1156; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 217 - 374
Target Start/End: Complemental strand, 785 - 631
Alignment:
Q  217 aaatctcattataaatactagccttcttcattcagaatttctcgttcagaactgtggcagtttaatatgaaagctactttggagtttcgggagagaatct 316  Q
    |||||||| |||||| || | ||||| ||||||| ||  |||  || ||||||||||||||| || | | |  | ||||||||| |||| |||||  | |    
T  785 aaatctcactataaagaccacccttcctcattcataaactctaatttagaactgtggcagttcaagagggagacaactttggagcttcgagagagttttt 686  T
Q  317 atcttctccttgattttctagggtatgtttttatctttagtaatttgtttttagttac 374  Q
    ||||||||    |||||||||||||||||||||||||| |||||||||||||||||||    
T  685 atcttctct---attttctagggtatgtttttatcttttgtaatttgtttttagttac 631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 244485 - 244546
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatc-tttagtaatttgtttttagttac 374  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||||||||| |||||||||    
T  244485 tctatcttctccttgtttttctagtgtatgtttttatcttttagtaatttgtgtttagttac 244546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 95380 - 95317
Alignment:
Q  23 aagacctaaaaacgacgaagataggagaaattggacccggaagcacacaagaatgcgcctaggg 86  Q
    |||||||||||||||| || || | ||||||||| |||  ||||||||||||||||||||||||    
T  95380 aagacctaaaaacgacaaaaatcgaagaaattggccccataagcacacaagaatgcgcctaggg 95317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1339 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 314 - 375
Target Start/End: Complemental strand, 669 - 607
Alignment:
Q  314 tctatcttctccttgattttctagggtatgttttta-tctttagtaatttgtttttagttact 375  Q
    ||||||||||||||| |||||| ||||||||||||| | ||| ||||||||| ||||||||||    
T  669 tctatcttctccttgtttttcttgggtatgtttttatttttttgtaatttgtctttagttact 607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 89138 - 89185
Alignment:
Q  314 tctatcttctccttgattttctagggtatgtttttatctttagtaatt 361  Q
    ||||||||||| |||||||||| ||||||||| ||||||||| |||||    
T  89138 tctatcttctctttgattttctggggtatgttgttatctttattaatt 89185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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