View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1376_high_126 (Length: 251)
Name: NF1376_high_126
Description: NF1376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1376_high_126 |
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Alignment Details
Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 38904417 - 38904658
Alignment:
| Q |
1 |
agcactttgtcttcatggatatgaaattgaccaccactaattaatacttactatataagattaaggattttcgtagctaaatcaataccaaactatttat |
100 |
Q |
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| T |
38904417 |
agcactttgtcttcatggatatgaaattgaccaccactaattaatacttactatataagattaaggattttcgtagctaaatcaataccaaactatttat |
38904516 |
T |
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| Q |
101 |
agaaaatgaaaagcaaaaagaaagtacacactgcactagtatcctctctcttttctttttaagatgaatcaagcatgccttaaacaactttatagcgaga |
200 |
Q |
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| T |
38904517 |
agaaaatgaaaagcaaaaagaaagtacacactgcactagtatcctctctcttttctttttaagatgaatcaagcatgccttaaacaactttatagcgaga |
38904616 |
T |
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| Q |
201 |
gaaagagatcataaatcaaataatgcccaaatccagaattat |
242 |
Q |
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| T |
38904617 |
gaaagagatcataaatcaaataatgcccaaatccagaattat |
38904658 |
T |
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