View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1376_high_22 (Length: 514)

Name: NF1376_high_22
Description: NF1376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1376_high_22
NF1376_high_22
[»] chr2 (8 HSPs)
chr2 (4-400)||(3261954-3262349)
chr2 (18-109)||(16351946-16352037)
chr2 (17-109)||(13413264-13413356)
chr2 (17-109)||(17344551-17344643)
chr2 (16-112)||(19161882-19161978)
chr2 (19-109)||(41868010-41868100)
chr2 (8-109)||(4413168-4413269)
chr2 (68-109)||(5532384-5532425)
[»] chr7 (9 HSPs)
chr7 (18-109)||(43856788-43856879)
chr7 (17-112)||(21326937-21327032)
chr7 (18-109)||(27521385-27521476)
chr7 (17-109)||(9281233-9281330)
chr7 (17-109)||(9292204-9292301)
chr7 (41-106)||(26770058-26770123)
chr7 (17-109)||(982862-982954)
chr7 (8-109)||(19277195-19277298)
chr7 (17-101)||(23037458-23037542)
[»] chr3 (10 HSPs)
chr3 (11-104)||(7502117-7502210)
chr3 (8-109)||(46940875-46940976)
chr3 (28-109)||(53785633-53785714)
chr3 (17-109)||(52411993-52412085)
chr3 (8-107)||(39583333-39583432)
chr3 (16-105)||(38145968-38146057)
chr3 (17-109)||(44198680-44198772)
chr3 (8-106)||(26772662-26772760)
chr3 (8-109)||(32546699-32546800)
chr3 (29-109)||(4472987-4473067)
[»] chr6 (7 HSPs)
chr6 (18-118)||(24016251-24016351)
chr6 (19-101)||(29338189-29338271)
chr6 (8-109)||(32115622-32115723)
chr6 (17-102)||(28009096-28009181)
chr6 (17-96)||(3137362-3137441)
chr6 (8-66)||(28543301-28543359)
chr6 (17-109)||(34304409-34304501)
[»] chr5 (5 HSPs)
chr5 (8-109)||(37873740-37873841)
chr5 (8-109)||(2566197-2566298)
chr5 (28-109)||(35310372-35310453)
chr5 (8-109)||(42921602-42921702)
chr5 (29-109)||(22188757-22188837)
[»] chr1 (4 HSPs)
chr1 (29-109)||(38731534-38731614)
chr1 (18-109)||(34644480-34644571)
chr1 (17-109)||(2764392-2764484)
chr1 (17-109)||(31737425-31737516)
[»] chr4 (14 HSPs)
chr4 (3-109)||(45661590-45661696)
chr4 (16-109)||(16955372-16955465)
chr4 (17-108)||(54190954-54191045)
chr4 (17-103)||(23242813-23242899)
chr4 (28-109)||(56462208-56462289)
chr4 (28-109)||(23255637-23255718)
chr4 (8-109)||(50001028-50001129)
chr4 (8-109)||(53619490-53619591)
chr4 (28-112)||(25504219-25504303)
chr4 (18-109)||(4419177-4419268)
chr4 (30-109)||(53098347-53098426)
chr4 (17-109)||(53170425-53170518)
chr4 (40-109)||(38535671-38535740)
chr4 (18-97)||(19037243-19037320)
[»] chr8 (9 HSPs)
chr8 (28-109)||(3821148-3821229)
chr8 (8-112)||(22589435-22589539)
chr8 (17-109)||(38815207-38815299)
chr8 (1-112)||(6618182-6618292)
chr8 (8-109)||(39434571-39434672)
chr8 (17-109)||(3187883-3187974)
chr8 (29-107)||(6592501-6592578)
chr8 (43-109)||(24124967-24125033)
chr8 (29-105)||(28196117-28196193)
[»] scaffold0470 (1 HSPs)
scaffold0470 (1-112)||(7500-7610)
[»] scaffold0031 (1 HSPs)
scaffold0031 (30-108)||(49341-49419)


Alignment Details
Target: chr2 (Bit Score: 353; Significance: 0; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 4 - 400
Target Start/End: Complemental strand, 3262349 - 3261954
Alignment:
Q  4 tgttccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactc 103  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3262349 tgttccactagctcttttttgatggcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcaagaccctttgaactc 3262250  T
Q  104 tatgtaaaaattcaattacctatggtagaaagatggtggaggatgagtcacatgaagaagaaaaagaaatgtatatcatgaaagttctgtcttacattga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3262249 tatgtaaaaattcaattacctatggtagaaagatggtggaggatgagtcacatgaagaagaaaaagaaatgtatatcatgaaagttctgtcttacattga 3262150  T
Q  204 tcttttgaaatgaacaagtgaagcggaaattcatttgaannnnnnnnctctcaccataaatgttaaaaattgtgaaaacttataatctaagtttattggt 303  Q
    |||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3262149 tcttttgaaatgaacaagtgaagcggaaattcatttgaatttttttt-tctcaccataaatgttaaaaattgtgaaaacttataatctaagtttattggt 3262051  T
Q  304 tcaaatgcatgagtggatgctacaaattttccttttacatattttctcataccttattttatgaaaattacatttgatccaagaggaattgatgatg 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3262050 tcaaatgcatgagtggatgctacaaattttccttttacatattttctcataccttattttatgaaaattacatttgatccaagaggaattgatgatg 3261954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 16352037 - 16351946
Alignment:
Q  18 ttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    ||||| ||| |||||| ||||  |||||||||||||||| ||| ||||| ||| ||||||| || ||||||||||| |||||||||||||||    
T  16352037 tttttagatggcaaaaacaatcatcgtaaacataatattcatgtacctaagagacatgacattgttgtgcatgaccatttgaactctatgta 16351946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 13413264 - 13413356
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||| ||| |||||| |||||||| |||||| || ||| ||||||||| ||| ||||||| || | ||||||||| |||||||||||||||    
T  13413264 ctttttggatggcaaaaccaattctcataaacacaacattcatggacctaggagacatgacattgttatgcatgaccttttgaactctatgta 13413356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 17344551 - 17344643
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||| ||| | ||||||||| |||||||||| || ||| ||||||||| ||| ||||||| || | ||||||||| |||||||||||||||    
T  17344551 ctttttggatcgaaaaatcaatcctcgtaaacacaacattcatggacctaggagacatgacattgttatgcatgaccttttgaactctatgta 17344643  T

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Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 19161978 - 19161882
Alignment:
Q  16 tcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgtaaaa 112  Q
    ||||||| |||  |||||||||| |||| ||||| | |||| || |||||| ||| ||||||| |||| ||||||||| ||||||||||||||||||    
T  19161978 tctttttggatgacaaaatcaatcctcgaaaacacactattcattgacctaggagacatgacattgatatgcatgaccttttgaactctatgtaaaa 19161882  T

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Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 41868100 - 41868010
Alignment:
Q  19 tttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||| | |||||| |||| |||||||||| || ||| ||||||||  ||| ||||||| || | ||||||||| |||||||||||||||    
T  41868100 tttttggtggcaaaaccaatcctcgtaaacacaacattcatggacctgggagacatgacattgttatgcatgaccttttgaactctatgta 41868010  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 4413269 - 4413168
Alignment:
Q  8 ccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatg 107  Q
    |||||||  |||||| ||| ||||||||||| ||| | |||| || ||| ||||||||| ||| ||||||  || | ||||||||| ||||||| |||||    
T  4413269 ccgctagacctttttggatggcaaaatcaatcctcatgaacacaacattcatggacctaggagacatgactttgctatgcatgaccttttgaaccctatg 4413170  T
Q  108 ta 109  Q
    ||    
T  4413169 ta 4413168  T

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Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 5532384 - 5532425
Alignment:
Q  68 gagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||||| || || |||||||||||||||||||||||||||    
T  5532384 gagtcatggcattgttgtgcatgaccctttgaactctatgta 5532425  T

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Target: chr7 (Bit Score: 68; Significance: 4e-30; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 43856788 - 43856879
Alignment:
Q  18 ttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    ||||| ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||| || |||||||||||||||||||||||||||    
T  43856788 tttttggatagcaaaatcaattctcgtaaacataacattcatggacctaggagtcatgacattgttgtgcatgaccctttgaactctatgta 43856879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 21327032 - 21326937
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgtaaaa 112  Q
    |||||| ||| ||||||||||| ||||| |||| || ||| ||||||||| ||| ||| ||| || | ||||||||| ||||||||||||||||||    
T  21327032 ctttttggatggcaaaatcaatcctcgtgaacacaacattcatggacctaggagacataacattgctatgcatgaccttttgaactctatgtaaaa 21326937  T

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Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 27521385 - 27521476
Alignment:
Q  18 ttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    ||||| ||| ||||||||||| |||||||||| || ||| || ||| || ||| ||||||| || | ||||||||| |||||||||||||||    
T  27521385 tttttcgatggcaaaatcaatcctcgtaaacacaacattcatagacttaggagacatgacattgttatgcatgaccttttgaactctatgta 27521476  T

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Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 9281330 - 9281233
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtg-----catgaccctttgaactctatgta 109  Q
    |||||| ||| |||||| |||||||| |||||| || ||| |||||| || ||||||||||| || ||||     |||||||||||||||||||||||    
T  9281330 ctttttggattgcaaaaccaattctcctaaacacaacattaatggacttaagagtcatgacattgttgtgctgtacatgaccctttgaactctatgta 9281233  T

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Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 9292301 - 9292204
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtg-----catgaccctttgaactctatgta 109  Q
    |||||| ||| |||||| |||||||| |||||| || ||| |||||| || ||||||||||| || ||||     |||||||||||||||||||||||    
T  9292301 ctttttggattgcaaaaccaattctcctaaacacaacattaatggacttaagagtcatgacattgttgtgctgtacatgaccctttgaactctatgta 9292204  T

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Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 26770058 - 26770123
Alignment:
Q  41 tcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctat 106  Q
    ||||||||  |||||||||||||||| ||||||||| | || ||||||||| | ||||||||||||    
T  26770058 tcgtaaacccaatatttatggacctaagagtcatgatattgttgtgcatgatcttttgaactctat 26770123  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 982862 - 982954
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||| ||| |||| | |||| ||||| |||| || ||| |||||| ||  || ||||||| |||| ||||||||| |||||||||||||||    
T  982862 ctttttggatggcaataccaatcctcgtgaacacaacattcatggacatagaagacatgacattgatatgcatgaccttttgaactctatgta 982954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 19277195 - 19277298
Alignment:
Q  8 ccgctagctcttttttgatagcaaaatcaattctcgta--aacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactcta 105  Q
    |||||||  |||||| ||| |||||| ||||| ||||   |||| || ||| ||||||||| ||| ||||||| || | ||||||||| |||||||||||    
T  19277195 ccgctagacctttttggatggcaaaaccaattttcgtgtgaacacaacattcatggacctaggagacatgacattgctatgcatgaccttttgaactcta 19277294  T
Q  106 tgta 109  Q
    ||||    
T  19277295 tgta 19277298  T

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Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 23037458 - 23037542
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaac 101  Q
    |||||| ||| ||||||||||| |||||||||| || ||| || |||||| |||  |||||| || | ||||| |||||||||||    
T  23037458 ctttttagatggcaaaatcaatcctcgtaaacacaaaattcatagacctaagagaaatgacattgctatgcataaccctttgaac 23037542  T

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Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 7502210 - 7502117
Alignment:
Q  11 ctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactct 104  Q
    |||| ||||||| |||||||||||||||| |||||||||||||||| ||||| ||||||||||||||| || ||||||||||||||| ||||||    
T  7502210 ctaggtctttttggatagcaaaatcaattatcgtaaacataatattcatggatctatgagtcatgacattgttgtgcatgaccctttaaactct 7502117  T

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Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 46940976 - 46940875
Alignment:
Q  8 ccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatg 107  Q
    ||||||| ||||||| |||| ||||||||||| ||||||||| || ||| ||| ||||||||||||||||| ||  |||||||| |||||||||||||||    
T  46940976 ccgctaggtctttttggataacaaaatcaattttcgtaaacacaacattcatgaacctatgagtcatgacattgtcgtgcatgatcctttgaactctatg 46940877  T
Q  108 ta 109  Q
    ||    
T  46940876 ta 46940875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 53785633 - 53785714
Alignment:
Q  28 gcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||| |||| ||||||||||||| ||| ||||||||| ||| ||||||| || | ||||||||| |||||||||||||||    
T  53785633 gcaaaaccaatcctcgtaaacataacattcatggacctaggagacatgacattgctatgcatgaccttttgaactctatgta 53785714  T

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Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 52412085 - 52411993
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||| ||| |||||||||||  | ||||||| |||||||||||  ||| ||| ||||||| || | |||||||||||||||||||||||||    
T  52412085 ctttttggatggcaaaatcaatcattgtaaacacaatatttatgggtctaggagacatgacattgttatgcatgaccctttgaactctatgta 52411993  T

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Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 39583432 - 39583333
Alignment:
Q  8 ccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatg 107  Q
    |||||||  |||||| ||| ||||||||||| ||||||||||  | ||| ||| ||||| ||| ||||||| || | |||||||||||||||||||||||    
T  39583432 ccgctagacctttttggatggcaaaatcaatcctcgtaaacacgacattcatgaacctaggagacatgacattgctatgcatgaccctttgaactctatg 39583333  T

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Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 38145968 - 38146057
Alignment:
Q  16 tcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactcta 105  Q
    ||||||| |||  ||||||||||  ||||||||| ||  || ||||||||| ||| ||||||| || | |||||||||||||||||||||    
T  38145968 tctttttagatgacaaaatcaatcatcgtaaacacaacgttcatggacctaggagacatgacattgttatgcatgaccctttgaactcta 38146057  T

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Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 44198680 - 44198772
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||| ||| |||||||||||| ||| ||||| || ||| ||||||||| ||| ||||||| || | ||||| ||| | |||||||||||||    
T  44198680 ctttttggatggcaaaatcaattatcgcaaacacaacattcatggacctaggagacatgacattgctatgcataaccttctgaactctatgta 44198772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 26772662 - 26772760
Alignment:
Q  8 ccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctat 106  Q
    |||||||  |||||| ||| ||||||||||| |||||||||| || ||| ||||||||| ||| ||| ||| || | ||||| | |||||| |||||||    
T  26772662 ccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattcatggacctaggagacataacattgttatgcataatcctttgtactctat 26772760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 32546699 - 32546800
Alignment:
Q  8 ccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatg 107  Q
    |||||||  |||||| ||| |||||| |||| ||||| |||| || ||| ||||||||| ||| ||||||| |  | ||||||||  |||||||||||||    
T  32546699 ccgctagacctttttggatggcaaaaccaatcctcgtgaacacaacattcatggacctaggagacatgacattactatgcatgactttttgaactctatg 32546798  T
Q  108 ta 109  Q
    ||    
T  32546799 ta 32546800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 4472987 - 4473067
Alignment:
Q  29 caaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    ||||| ||||||||||||||| |||||| || |||||| ||| ||||| | || | |||||||  ||||||||| ||||||    
T  4472987 caaaaccaattctcgtaaacacaatattcatagacctaggagacatgaaattgctatgcatgattctttgaactttatgta 4473067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 24016251 - 24016351
Alignment:
Q  18 ttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgtaaaaattca 117  Q
    |||||| ||||||||| ||||| |||||||||||||||||||| || || ||| ||||||| |  ||||||||||||||||||||||||||||||| |||    
T  24016251 ttttttaatagcaaaaccaattatcgtaaacataatatttatgtacttaggagacatgacattcttgtgcatgaccctttgaactctatgtaaaaaatca 24016350  T
Q  118 a 118  Q
    |    
T  24016351 a 24016351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 29338271 - 29338189
Alignment:
Q  19 tttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaac 101  Q
    |||| ||||| ||||||||| || ||||||| || ||| ||||||||| ||||||||||| ||||||||||||||||||||||    
T  29338271 ttttggatagaaaaatcaatccttgtaaacacaacattcatggacctaggagtcatgacattgatgtgcatgaccctttgaac 29338189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 32115622 - 32115723
Alignment:
Q  8 ccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatg 107  Q
    |||||||  |||||| |||||||||||||||  ||||||||| || ||| ||||||||| ||| ||||||| || | ||||||||| |||||||||| ||    
T  32115622 ccgctagacctttttagatagcaaaatcaatcatcgtaaacacaacattcatggacctaggagacatgacattgttatgcatgaccttttgaactctttg 32115721  T
Q  108 ta 109  Q
    ||    
T  32115722 ta 32115723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 28009181 - 28009096
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaact 102  Q
    |||||| ||| |||||||||||||| ||||| | ||  || ||||||||| ||||||||||| || |||| |||||||||||||||    
T  28009181 ctttttggattgcaaaatcaattctggtaaagacaacgttcatggacctaggagtcatgacattgttgtgtatgaccctttgaact 28009096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 3137441 - 3137362
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctt 96  Q
    |||||| ||| |||||| |||| |||||||||| || ||| ||||||||| ||| ||||||| || | ||||||||||||    
T  3137441 ctttttggatggcaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctatgcatgaccctt 3137362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 28543301 - 28543359
Alignment:
Q  8 ccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggaccta 66  Q
    ||||||| ||||||  ||| |||||| |||| ||| |||||||||||||||||||||||    
T  28543301 ccgctagatcttttcagatggcaaaaccaatcctcttaaacataatatttatggaccta 28543359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 34304409 - 34304501
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||| ||| ||||||||||| |||||||| | || ||| || |||||||||| ||||| | || | ||||| || ||||| ||||||||||    
T  34304409 ctttttggattgcaaaatcaatcctcgtaaatacaacattcatagacctatgagacatgatattgctatgcataactctttggactctatgta 34304501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 37873841 - 37873740
Alignment:
Q  8 ccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatg 107  Q
    |||||||  |||||||||||||||||||||| ||| |||||| || ||| || ||||||  |||||||||| || | |||||||||||||||||||||||    
T  37873841 ccgctaggccttttttgatagcaaaatcaatcctcttaaacacaacattcatagacctagaagtcatgacattgttctgcatgaccctttgaactctatg 37873742  T
Q  108 ta 109  Q
    ||    
T  37873741 ta 37873740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 2566298 - 2566197
Alignment:
Q  8 ccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatg 107  Q
    |||||||  |||||| ||| ||||||||||| |||||||||| || ||| ||||| ||| ||| ||||||| || | ||||||||| |||||||||||||    
T  2566298 ccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattgatggatctaggagacatgacattgctatgcatgaccttttgaactctatg 2566199  T
Q  108 ta 109  Q
    ||    
T  2566198 ta 2566197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 35310372 - 35310453
Alignment:
Q  28 gcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||| ||||||||||||||| || ||| ||||||||| ||| ||| ||| |||| ||||  |||||||| ||||||||||    
T  35310372 gcaaaaccaattctcgtaaacacaacattcatggacctaggagacataacattgatatgcaaaaccctttggactctatgta 35310453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 42921602 - 42921702
Alignment:
Q  8 ccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatg 107  Q
    ||||||| ||||||| ||| |||||| |||| || ||||||| |||||| |||||| || ||| ||||||| || | ||||||||| | |||||||||||    
T  42921602 ccgctagatctttttggatggcaaaaccaatccttgtaaacacaatatt-atggacttaggagacatgacattgttatgcatgaccttctgaactctatg 42921700  T
Q  108 ta 109  Q
    ||    
T  42921701 ta 42921702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 22188837 - 22188757
Alignment:
Q  29 caaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    ||||| ||||||||||||||| || ||| ||| | ||| ||| ||||| | || | ||||||||| |||||||||||||||    
T  22188837 caaaaccaattctcgtaaacacaacattcatgaatctaggagacatgatattgttatgcatgaccttttgaactctatgta 22188757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 8e-19; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 38731534 - 38731614
Alignment:
Q  29 caaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||| |||| ||||||||||| |||||| ||||||||| ||||||||||| |  |||||||||||||||||||||||||||    
T  38731534 caaagtcaaatctcgtaaacacaatattcatggacctaggagtcatgacattattgtgcatgaccctttgaactctatgta 38731614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 34644480 - 34644571
Alignment:
Q  18 ttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    ||||| ||| |||||||||||  ||||||||| || ||| ||||||||| ||| ||| ||| |||| ||||| |||||||| ||||||||||    
T  34644480 tttttggatggcaaaatcaatcatcgtaaacacaacattcatggacctaggagacataacattgatatgcataaccctttggactctatgta 34644571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 2764392 - 2764484
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||| ||| | |||||||||  ||||||||| || ||||||||||||| ||| ||| ||| |||| ||||| |||||||| ||| ||||||    
T  2764392 ctttttggatggtaaaatcaatcatcgtaaacacaacatttatggacctaagagacataacattgatttgcataaccctttggactttatgta 2764484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 31737516 - 31737425
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||| ||| ||||||||||| ||||||||||  | ||| ||||| ||| ||  ||| ||| |||| ||||||||| |||||||||||||||    
T  31737516 ctttttggatggcaaaatcaatcctcgtaaacacta-attcatggatctaggaaacataacattgatatgcatgaccttttgaactctatgta 31737425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 45661590 - 45661696
Alignment:
Q  3 ctgttccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaact 102  Q
    |||| ||| ||| ||||||| ||||| |||| |||| |||||||||| |||||| ||||||||| |||| |||||| || |||| |||||||||||||||    
T  45661590 ctgtaccgttaggtctttttggatagtaaaaccaatcctcgtaaacacaatattcatggacctacgagttatgacattgttgtgtatgaccctttgaact 45661689  T
Q  103 ctatgta 109  Q
     ||||||    
T  45661690 ttatgta 45661696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 16955372 - 16955465
Alignment:
Q  16 tcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    ||||||||||| || |||||||| |||||||||| || ||| |||| |||| ||| ||||||| || | ||||||||| |||||||||||||||    
T  16955372 tcttttttgatggccaaatcaatcctcgtaaacacaacattcatgggcctaggagacatgacattgctatgcatgaccttttgaactctatgta 16955465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 54191045 - 54190954
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgt 108  Q
    |||||| |||||||||| ||||  | ||||| | ||||||||||||| || ||||||||||| || | |||||| |||||||||||||||||    
T  54191045 ctttttggatagcaaaaccaatctttgtaaatacaatatttatggacttaagagtcatgacattgttatgcatggccctttgaactctatgt 54190954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 23242813 - 23242899
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactc 103  Q
    |||||| |||| ||||||||||  ||||||||| |||||||||||||||| |||  |||||| || | ||||||||||||| |||||    
T  23242813 ctttttggataacaaaatcaatcatcgtaaacacaatatttatggacctaagagaaatgacattgttatgcatgaccctttaaactc 23242899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 56462289 - 56462208
Alignment:
Q  28 gcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||| ||||||||||||||| || |||||||||| || ||| ||||||| ||   ||||||| |||||||||||||||||    
T  56462289 gcaaaaccaattctcgtaaacacaacatttatggacttaggagacatgacattgtcatgcatgatcctttgaactctatgta 56462208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 23255637 - 23255718
Alignment:
Q  28 gcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    ||||||||||| |||||||||| |||||| |||||| || ||| ||| ||| || | ||||| |||||||| ||||||||||    
T  23255637 gcaaaatcaatcctcgtaaacacaatattcatggacttaggagacataacattgttatgcataaccctttggactctatgta 23255718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 50001129 - 50001028
Alignment:
Q  8 ccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatg 107  Q
    ||||||| ||||||| ||| |||||||||||  ||||||||| || ||||||||| ||| ||| ||| ||| || | ||||| |||||||| ||| ||||    
T  50001129 ccgctagatctttttggatggcaaaatcaatcttcgtaaacacaacatttatggatctaggagacataacattgctatgcataaccctttggactatatg 50001030  T
Q  108 ta 109  Q
    ||    
T  50001029 ta 50001028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 53619490 - 53619591
Alignment:
Q  8 ccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatg 107  Q
    |||||||  |||||| ||| |||||| ||||||||||||||| || ||| ||||||||| ||| ||| ||| || | ||||| |||||||  ||||||||    
T  53619490 ccgctagacctttttggatggcaaaaccaattctcgtaaacacaacattcatggacctaagagacataacattgttatgcataaccctttagactctatg 53619589  T
Q  108 ta 109  Q
    ||    
T  53619590 ta 53619591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 25504219 - 25504303
Alignment:
Q  28 gcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgtaaaa 112  Q
    |||||| |||| ||| |||||| |||||| ||||||||||||| ||||||| |  | ||||||||| ||| |||||||| |||||    
T  25504219 gcaaaagcaatcctcataaacacaatattcatggacctatgagacatgacattactatgcatgaccttttaaactctatttaaaa 25504303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 4419177 - 4419268
Alignment:
Q  18 ttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    ||||| ||| |||||| ||||  ||||||||| || ||| ||||||||| ||| ||| ||| || | ||||| |||||||||||||||||||    
T  4419177 tttttggatggcaaaaccaatcatcgtaaacacaacattcatggacctaggagacataacattgttatgcataaccctttgaactctatgta 4419268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 53098347 - 53098426
Alignment:
Q  30 aaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    ||||||||| |||||||||| | ||||  ||||| ||  ||||| |||| ||||| |||||||| |||||||||||||||    
T  53098347 aaaatcaatcctcgtaaacacagtattcttggacataaaagtcacgacattgatgggcatgaccatttgaactctatgta 53098426  T

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Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 53170425 - 53170518
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctat--gagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||| ||||||||||||||| ||||| |||| || ||| ||| ||||||  ||| ||||||| || | ||||||||| |||||||||||||||    
T  53170425 ctttttagatagcaaaatcaatcctcgtgaacacaacattcatg-acctataggagacatgacattgctatgcatgaccttttgaactctatgta 53170518  T

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Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 38535740 - 38535671
Alignment:
Q  40 ctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||||||| || ||  |||||||||| || ||||||| || | |||||||| ||||||||||||||||    
T  38535740 ctcgtaaacacaacatccatggacctataagacatgacattgctatgcatgactctttgaactctatgta 38535671  T

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Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 19037320 - 19037243
Alignment:
Q  18 ttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgacccttt 97  Q
    ||||| |||||||||||||||  | ||||||  ||||||||| || ||| |||||||||||   ||||||||||||||||    
T  19037320 tttttagatagcaaaatcaatcatagtaaacccaatatttatcgatctaagagtcatgaca--tatgtgcatgacccttt 19037243  T

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Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 3821148 - 3821229
Alignment:
Q  28 gcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||| |||||| ||||||||||||| ||||||| ||||| ||| ||||||| || | ||||| |||||||||||||||||||    
T  3821148 gcaatatcaatcctcgtaaacataacatttatgaacctaggagacatgacattgctatgcattaccctttgaactctatgta 3821229  T

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Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 22589539 - 22589435
Alignment:
Q  8 ccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatg 107  Q
    |||||||  |||||| ||| |||||| |||| ||||| |||| || ||| || |||||||||| ||||||| || | ||||||||| |||||||||||||    
T  22589539 ccgctagacctttttggatggcaaaaccaatcctcgtgaacacaacattcatagacctatgagacatgacattgctatgcatgaccttttgaactctatg 22589440  T
Q  108 taaaa 112  Q
    |||||    
T  22589439 taaaa 22589435  T

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Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 38815207 - 38815299
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||| ||| | |||| |||| |||||||||| || ||| ||||||||| ||| ||||||| || | |||||||||||||||||||||||||    
T  38815207 ctttttggatggaaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctatgcatgaccctttgaactctatgta 38815299  T

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Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 6618182 - 6618292
Alignment:
Q  1 agctgttccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaa 100  Q
    |||||| ||| ||| ||||||| |||  ||||| |||| ||||||||||||| ||| ||||||||||||| ||||||| | || ||||||||| ||||||    
T  6618182 agctgtgccgttagatctttttggatgacaaaaccaatactcgtaaacataacattcatggacctatgagacatgaca-ttatatgcatgaccttttgaa 6618280  T
Q  101 ctctatgtaaaa 112  Q
    | ||||| ||||    
T  6618281 cgctatgcaaaa 6618292  T

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Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 39434571 - 39434672
Alignment:
Q  8 ccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatg 107  Q
    |||||||  |||||| ||| ||||||||||| |||||||||| || ||| ||||| ||| ||| ||| ||| |||| ||||| |||||||| ||||||||    
T  39434571 ccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattcatggatctaagagacattacattgatatgcataaccctttggactctatg 39434670  T
Q  108 ta 109  Q
    ||    
T  39434671 ta 39434672  T

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Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 3187883 - 3187974
Alignment:
Q  17 cttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    |||||| ||| |||||| ||||||||||||||| || ||| ||||||||| ||| ||| ||| || | ||||| |||||||| ||||||||||    
T  3187883 ctttttggatggcaaaaccaattctcgtaaacacaacattcatggacctaggagacataacattgctatgcataaccctttg-actctatgta 3187974  T

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Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 6592501 - 6592578
Alignment:
Q  29 caaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatg 107  Q
    ||||| |||| |||||||||| || ||| ||| ||||||||| ||||||| | || ||||||||| |||||||||||||    
T  6592501 caaaaccaatactcgtaaacacaacattcatgaacctatgagacatgacatt-atatgcatgaccttttgaactctatg 6592578  T

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Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 24124967 - 24125033
Alignment:
Q  43 gtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgta 109  Q
    ||||||| || ||| ||||||||||||| ||||||| || | ||||||||| |||||||| ||||||    
T  24124967 gtaaacacaacattcatggacctatgagacatgacattgctatgcatgaccttttgaactttatgta 24125033  T

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Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 28196117 - 28196193
Alignment:
Q  29 caaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactcta 105  Q
    |||||||||||| |||||||| || ||   |||| ||| ||| ||||||| || ||||||||| |||||||||||||    
T  28196117 caaaatcaattcccgtaaacacaacatccgtggatctaggagacatgacattgttgtgcatgatcctttgaactcta 28196193  T

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Target: scaffold0470 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 7500 - 7610
Alignment:
Q  1 agctgttccgctagctcttttttgatagcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaa 100  Q
    |||||| ||| ||| ||||||| |||  ||||| |||| ||||||||||||| ||| ||||||||||||| ||||||| | || ||||||||| ||||||    
T  7500 agctgtgccgttagatctttttggatgacaaaaccaatactcgtaaacataacattcatggacctatgagacatgaca-ttatatgcatgaccttttgaa 7598  T
Q  101 ctctatgtaaaa 112  Q
    | ||||| ||||    
T  7599 cgctatgcaaaa 7610  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 49341 - 49419
Alignment:
Q  30 aaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcatgaccctttgaactctatgt 108  Q
    |||||||||||||||||| |  | ||| |||||| || ||| ||||||| || | ||||||| ||||||||||||||||    
T  49341 aaaatcaattctcgtaaatactacattcatggacataagagacatgacattgttatgcatgatcctttgaactctatgt 49419  T

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