View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1376_high_77 (Length: 334)
Name: NF1376_high_77
Description: NF1376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1376_high_77 |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 105 - 324
Target Start/End: Original strand, 20549086 - 20549305
Alignment:
| Q |
105 |
ttatagactatagcacaatttagaagctatgtaaaataatttactaactttctgttcagaacttgattagatctctccctctcgttgtttctctgatgtg |
204 |
Q |
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| T |
20549086 |
ttatagactatagcacaatttagaagctatgtaaaataatttactaactttctgttcagaacttgattagatctctccctctcgttgtttctctgatgtg |
20549185 |
T |
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| Q |
205 |
agaagaatcaaacttctttggcattgcaaatcaattctcattttgactcgagaaatctgagctgaataccataagcttccttaagctctgctaatacttc |
304 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20549186 |
agaagaatcaaacttctttggcattgcaaatcaattctcattttgactcgagaaatctgagctgaataccataagcttccttaagctctgctaatacttc |
20549285 |
T |
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| Q |
305 |
agcaataggcggcctctgtg |
324 |
Q |
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|||||||||||||||||||| |
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| T |
20549286 |
agcaataggcggcctctgtg |
20549305 |
T |
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