View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1376_low_106 (Length: 312)
Name: NF1376_low_106
Description: NF1376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1376_low_106 |
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Alignment Details
Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 32506664 - 32506537
Alignment:
| Q |
1 |
acattgcagatactccacttcaaatcttgcacttcttgatcaacaacactattggtactacttcctgattcatttatgttttgtctctctttttcacctc |
100 |
Q |
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| T |
32506664 |
acattgcatatactccacttcaaatcttgcacttcttgatcaacaacactattggtactactacctgattcatttatgttttgtctctctttttcacctc |
32506565 |
T |
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| Q |
101 |
tagattcatctgcttgtgtcgaccattg |
128 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
32506564 |
tagattcatctgcttgtgtcgaccattg |
32506537 |
T |
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