View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1376_low_145 (Length: 260)

Name: NF1376_low_145
Description: NF1376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1376_low_145
NF1376_low_145
[»] chr7 (33 HSPs)
chr7 (52-111)||(32541334-32541393)
chr7 (178-237)||(32541207-32541266)
chr7 (49-103)||(38188941-38188995)
chr7 (179-227)||(38188916-38188964)
chr7 (49-100)||(7495309-7495360)
chr7 (49-91)||(7792253-7792295)
chr7 (52-103)||(38189045-38189095)
chr7 (178-228)||(12847989-12848039)
chr7 (50-100)||(21146281-21146330)
chr7 (179-228)||(518337-518386)
chr7 (179-228)||(4582096-4582145)
chr7 (179-228)||(7792169-7792218)
chr7 (179-228)||(16730128-16730177)
chr7 (179-228)||(17707200-17707249)
chr7 (58-103)||(18927860-18927905)
chr7 (179-228)||(32813060-32813109)
chr7 (179-228)||(37468190-37468239)
chr7 (179-228)||(45296334-45296383)
chr7 (51-103)||(7495348-7495400)
chr7 (185-228)||(25676529-25676572)
chr7 (50-85)||(33618312-33618347)
chr7 (49-103)||(576267-576321)
chr7 (49-103)||(25676416-25676470)
chr7 (58-103)||(518363-518408)
chr7 (179-228)||(557718-557767)
chr7 (58-103)||(4582074-4582119)
chr7 (58-103)||(16730154-16730199)
chr7 (58-103)||(17707226-17707271)
chr7 (179-228)||(24007008-24007057)
chr7 (58-103)||(32813086-32813131)
chr7 (179-228)||(40459592-40459641)
chr7 (58-103)||(45296360-45296405)
chr7 (49-93)||(33618354-33618398)
[»] chr5 (20 HSPs)
chr5 (49-103)||(19265352-19265406)
chr5 (179-228)||(669578-669627)
chr5 (179-228)||(2851389-2851438)
chr5 (179-228)||(10642370-10642419)
chr5 (179-228)||(15295532-15295581)
chr5 (185-226)||(19265410-19265451)
chr5 (179-228)||(21119622-21119671)
chr5 (179-228)||(30984994-30985043)
chr5 (179-228)||(35858920-35858969)
chr5 (185-228)||(25104892-25104935)
chr5 (185-228)||(25163985-25164028)
chr5 (49-103)||(41308120-41308174)
chr5 (58-103)||(669604-669649)
chr5 (58-103)||(9616913-9616958)
chr5 (179-228)||(9616935-9616984)
chr5 (58-103)||(10642396-10642441)
chr5 (58-103)||(15295558-15295603)
chr5 (58-103)||(21119600-21119645)
chr5 (58-103)||(30985020-30985065)
chr5 (58-103)||(35858898-35858943)
[»] chr3 (34 HSPs)
chr3 (49-104)||(27263564-27263619)
chr3 (49-107)||(34848397-34848455)
chr3 (49-103)||(35367017-35367070)
chr3 (49-101)||(35366982-35367034)
chr3 (53-104)||(33987640-33987691)
chr3 (53-107)||(34848463-34848517)
chr3 (49-100)||(18364527-18364578)
chr3 (50-85)||(18365417-18365452)
chr3 (53-103)||(35367053-35367103)
chr3 (179-228)||(14888-14937)
chr3 (179-228)||(5409709-5409758)
chr3 (58-103)||(5409735-5409780)
chr3 (179-228)||(21913282-21913331)
chr3 (179-228)||(33047788-33047837)
chr3 (179-228)||(40997130-40997179)
chr3 (179-228)||(41950322-41950371)
chr3 (179-228)||(44926678-44926727)
chr3 (179-228)||(50902156-50902205)
chr3 (185-225)||(27263658-27263698)
chr3 (49-103)||(14601146-14601200)
chr3 (53-103)||(40316822-40316871)
chr3 (49-103)||(45691889-45691943)
chr3 (58-103)||(14866-14911)
chr3 (179-228)||(14600302-14600351)
chr3 (179-228)||(19286328-19286377)
chr3 (58-103)||(19286354-19286399)
chr3 (58-103)||(21913260-21913305)
chr3 (58-103)||(33047814-33047859)
chr3 (179-228)||(35366955-35367003)
chr3 (49-78)||(40316854-40316883)
chr3 (58-103)||(40997156-40997201)
chr3 (58-103)||(41950300-41950345)
chr3 (58-103)||(50902134-50902179)
chr3 (68-100)||(33987736-33987768)
[»] chr2 (46 HSPs)
chr2 (52-103)||(43871262-43871313)
chr2 (53-103)||(42553921-42553971)
chr2 (50-100)||(5616837-5616887)
chr2 (49-103)||(38285887-38285941)
chr2 (179-228)||(45326383-45326432)
chr2 (49-100)||(9171357-9171408)
chr2 (49-100)||(37486344-37486395)
chr2 (49-103)||(86244-86298)
chr2 (49-103)||(17153622-17153676)
chr2 (49-91)||(27247186-27247228)
chr2 (178-228)||(28137423-28137473)
chr2 (49-103)||(34041671-34041725)
chr2 (183-228)||(86127-86172)
chr2 (50-91)||(5616984-5617025)
chr2 (179-228)||(9302761-9302810)
chr2 (179-228)||(12391819-12391868)
chr2 (179-228)||(27247139-27247188)
chr2 (179-228)||(35466768-35466817)
chr2 (179-228)||(35860562-35860611)
chr2 (50-103)||(36213276-36213329)
chr2 (179-228)||(38285783-38285832)
chr2 (55-100)||(38285812-38285857)
chr2 (179-228)||(42453246-42453295)
chr2 (50-91)||(42553812-42553853)
chr2 (50-91)||(43871147-43871188)
chr2 (179-227)||(5616809-5616857)
chr2 (53-93)||(34041492-34041532)
chr2 (185-228)||(36213141-36213184)
chr2 (53-103)||(5617108-5617158)
chr2 (49-99)||(26275369-26275419)
chr2 (178-228)||(26275399-26275449)
chr2 (179-237)||(39271325-39271383)
chr2 (50-96)||(39272011-39272057)
chr2 (49-103)||(45326271-45326325)
chr2 (58-103)||(9302787-9302832)
chr2 (58-103)||(12391797-12391842)
chr2 (58-103)||(28137402-28137447)
chr2 (58-103)||(35466794-35466839)
chr2 (58-103)||(37426231-37426276)
chr2 (179-228)||(37426253-37426302)
chr2 (179-228)||(37486315-37486364)
chr2 (49-102)||(39271361-39271414)
chr2 (179-228)||(41759617-41759666)
chr2 (58-103)||(42453272-42453317)
chr2 (179-228)||(43871100-43871149)
chr2 (185-237)||(17153511-17153563)
[»] chr1 (16 HSPs)
chr1 (49-103)||(34306130-34306184)
chr1 (49-103)||(34306093-34306147)
chr1 (50-86)||(43623285-43623321)
chr1 (49-103)||(17306583-17306637)
chr1 (179-228)||(34306028-34306077)
chr1 (179-228)||(43055351-43055400)
chr1 (50-91)||(43637586-43637627)
chr1 (179-228)||(50579634-50579683)
chr1 (185-237)||(9398507-9398559)
chr1 (49-93)||(17306620-17306664)
chr1 (50-86)||(43995690-43995726)
chr1 (185-228)||(52869438-52869481)
chr1 (45-103)||(33112997-33113055)
chr1 (49-103)||(43055377-43055430)
chr1 (179-228)||(25699768-25699817)
chr1 (58-103)||(50579660-50579705)
[»] chr8 (27 HSPs)
chr8 (178-228)||(12110380-12110430)
chr8 (50-91)||(14123749-14123790)
chr8 (49-92)||(43748962-43749005)
chr8 (49-103)||(26758686-26758740)
chr8 (179-228)||(2378403-2378452)
chr8 (179-228)||(4599343-4599392)
chr8 (39-103)||(12110337-12110404)
chr8 (179-228)||(12391626-12391675)
chr8 (179-228)||(26758551-26758600)
chr8 (179-228)||(30591379-30591428)
chr8 (179-228)||(30887240-30887289)
chr8 (179-228)||(34852541-34852590)
chr8 (54-86)||(11929331-11929363)
chr8 (51-86)||(11941886-11941921)
chr8 (49-83)||(11910313-11910347)
chr8 (69-103)||(11910330-11910364)
chr8 (49-83)||(11941307-11941341)
chr8 (49-103)||(34740737-34740791)
chr8 (58-103)||(4599321-4599366)
chr8 (58-103)||(12391604-12391649)
chr8 (58-103)||(26758577-26758622)
chr8 (58-103)||(30591405-30591450)
chr8 (58-103)||(30887218-30887263)
chr8 (179-228)||(31960473-31960522)
chr8 (58-103)||(34852567-34852612)
chr8 (179-228)||(45264037-45264086)
chr8 (186-222)||(12505261-12505297)
[»] chr6 (16 HSPs)
chr6 (49-103)||(17508653-17508706)
chr6 (49-102)||(13504617-13504670)
chr6 (49-91)||(13507452-13507494)
chr6 (49-103)||(17508616-17508670)
chr6 (179-228)||(2523815-2523864)
chr6 (179-228)||(10838948-10838997)
chr6 (179-228)||(25087229-25087278)
chr6 (179-228)||(25510597-25510646)
chr6 (179-228)||(30592586-30592635)
chr6 (178-228)||(7807324-7807374)
chr6 (49-103)||(25510490-25510544)
chr6 (58-103)||(2523841-2523886)
chr6 (58-103)||(25087207-25087252)
chr6 (58-103)||(25510575-25510620)
chr6 (179-228)||(26047007-26047056)
chr6 (179-228)||(34783742-34783791)
[»] chr4 (24 HSPs)
chr4 (49-91)||(19183878-19183920)
chr4 (49-103)||(19914703-19914757)
chr4 (49-91)||(27551631-27551673)
chr4 (49-103)||(30548421-30548475)
chr4 (49-103)||(35234045-35234098)
chr4 (49-103)||(1757170-1757225)
chr4 (179-228)||(1757144-1757193)
chr4 (179-228)||(20254792-20254841)
chr4 (179-228)||(26496703-26496752)
chr4 (179-228)||(27551560-27551609)
chr4 (179-228)||(34150715-34150764)
chr4 (179-228)||(35234122-35234171)
chr4 (179-228)||(36668246-36668295)
chr4 (179-228)||(49318599-49318648)
chr4 (49-92)||(3075246-3075289)
chr4 (178-237)||(30548451-30548510)
chr4 (58-103)||(3151001-3151046)
chr4 (179-228)||(3151023-3151072)
chr4 (49-102)||(16335484-16335537)
chr4 (179-228)||(21232877-21232926)
chr4 (58-103)||(26496729-26496774)
chr4 (58-103)||(34150741-34150786)
chr4 (58-103)||(36668224-36668269)
chr4 (58-103)||(49318577-49318622)
[»] scaffold0365 (2 HSPs)
scaffold0365 (179-228)||(1068-1117)
scaffold0365 (58-103)||(1046-1091)
[»] scaffold0088 (1 HSPs)
scaffold0088 (49-86)||(41445-41482)
[»] scaffold0024 (1 HSPs)
scaffold0024 (179-228)||(95327-95376)
[»] scaffold0294 (1 HSPs)
scaffold0294 (179-237)||(5764-5822)
[»] scaffold0079 (1 HSPs)
scaffold0079 (49-102)||(57323-57376)


Alignment Details
Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 32541393 - 32541334
Alignment:
Q  52 taaaagttgttacaaggataatataacctaataatgataaaagttgttacaatttgcaag 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32541393 taaaagttgttacaaggataatataacctaataatgataaaagttgttacaatttgcaag 32541334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 32541266 - 32541207
Alignment:
Q  178 ttaatagtaataaaagttgttacgaggataatattgagattttaaattaatgtagagata 237  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  32541266 ttaatattaataaaagttgttacgaagataatattgagattttaaattaatctagagata 32541207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 38188995 - 38188941
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  38188995 taatagaagttgttacaatgataatataacctaataataataaaagttgttacaa 38188941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 38188964 - 38188916
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaa 227  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  38188964 taataataataaaagttgttacaaggataatattgagattttaaattaa 38188916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 7495309 - 7495360
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgtta 100  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  7495309 taataaaagttgttacaaagataatataacttaataatgataaatgttgtta 7495360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 7792295 - 7792253
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataa 91  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  7792295 taataaaagttgttacaaggataatataacctaataataataa 7792253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 38189095 - 38189045
Alignment:
Q  52 taaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  38189095 taaaagttgttacaagaataatataacctaataat-ataaaacttgttacaa 38189045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 12847989 - 12848039
Alignment:
Q  178 ttaatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    |||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  12847989 ttaataataataaaagttgttacaaggttaatattgagatttgaaattaat 12848039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 21146330 - 21146281
Alignment:
Q  50 aataaaagttgttacaaggataatataacctaataatgataaaagttgtta 100  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  21146330 aataaaagttgtttcaag-ataatataacctaataatgataaatgttgtta 21146281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 518386 - 518337
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  518386 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 518337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 4582096 - 4582145
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  4582096 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 4582145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 7792218 - 7792169
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| ||||||| |||||||  |||||||||||||||||||||||||||    
T  7792218 taataataataaatgttgttataaggataatattgagattttaaattaat 7792169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 16730177 - 16730128
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  16730177 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 16730128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 17707249 - 17707200
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  17707249 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 17707200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 18927860 - 18927905
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||| |||||||||| |||||||| ||||||||||||||||    
T  18927860 ttgttacaaagataatataatctaataataataaaagttgttacaa 18927905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 32813109 - 32813060
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  32813109 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 32813060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 37468190 - 37468239
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  37468190 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 37468239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 45296383 - 45296334
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  45296383 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 45296334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 7495348 - 7495400
Alignment:
Q  51 ataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||| ||||||| |||||||||||||  ||||||| ||||||||||||||||    
T  7495348 ataaatgttgttagaaggataatataatttaataataataaaagttgttacaa 7495400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 25676529 - 25676572
Alignment:
Q  185 taataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||    
T  25676529 taataaaagttgttacaaggttaatattgagatttgaaattaat 25676572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 85
Target Start/End: Original strand, 33618312 - 33618347
Alignment:
Q  50 aataaaagttgttacaaggataatataacctaataa 85  Q
    |||||||||||||| |||||||||||||||||||||    
T  33618312 aataaaagttgttataaggataatataacctaataa 33618347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 576321 - 576267
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||||| ||||||||  |||||| |||||| || ||||||    
T  576321 taataaaagttgttacaaggaaaatataacaaaataataataaaaattcttacaa 576267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 25676416 - 25676470
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||| | ||||||||  |||||| |||||| |||||||||    
T  25676416 taataaaagttgttacaagaaaaatataacaaaataataataaaaattgttacaa 25676470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 518408 - 518363
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  518408 ttgttacaaaaataatataatctaataataataaaagttgttacaa 518363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 557767 - 557718
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| ||||||||||||||  |||||||    
T  557767 taataataataaaagttgttacaaggttaatattgagatttggaattaat 557718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 4582074 - 4582119
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  4582074 ttgttacaaaaataatataatctaataataataaaagttgttacaa 4582119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 16730199 - 16730154
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  16730199 ttgttacaaaaataatataatctaataataataaaagttgttacaa 16730154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 17707271 - 17707226
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  17707271 ttgttacaaaaataatataatctaataataataaaagttgttacaa 17707226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 24007057 - 24007008
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||| | ||||||| | |||||||||||||||||||||||||    
T  24007057 taataataataataattgttacaaagataatattgagattttaaattaat 24007008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 32813131 - 32813086
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  32813131 ttgttacaaaaataatataatctaataataataaaagttgttacaa 32813086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 40459641 - 40459592
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||  | | |||||||||||||||||||||||    
T  40459641 taataataataaaagttgttataaagttaatattgagattttaaattaat 40459592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 45296405 - 45296360
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  45296405 ttgttacaaaaataatataatctaataataataaaagttgttacaa 45296360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 33618354 - 33618398
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaa 93  Q
    ||||||||||||||  |||||||||||||| ||||||| ||||||    
T  33618354 taataaaagttgtttaaaggataatataacataataataataaaa 33618398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 19265352 - 19265406
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19265352 taataaaagatgttacaaggataatataacctaataatgataaaagttgttacaa 19265406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 669627 - 669578
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  669627 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 669578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 2851389 - 2851438
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  2851389 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 2851438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 10642419 - 10642370
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  10642419 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 10642370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 15295581 - 15295532
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  15295581 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 15295532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 19265410 - 19265451
Alignment:
Q  185 taataaaagttgttacgaggataatattgagattttaaatta 226  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  19265410 taataaaagttgttacaatgataatattgagattttaaatta 19265451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 21119622 - 21119671
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  21119622 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 21119671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 30985043 - 30984994
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  30985043 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 30984994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 35858920 - 35858969
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  35858920 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 35858969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 25104892 - 25104935
Alignment:
Q  185 taataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||    
T  25104892 taataaaagttgttacaaggttaatattgagatttgaaattaat 25104935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 25163985 - 25164028
Alignment:
Q  185 taataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||    
T  25163985 taataaaagttgttacaaggttaatattgagatttgaaattaat 25164028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 41308174 - 41308120
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||| | ||||||||  |||||| |||||| |||||||||    
T  41308174 taataaaagttgttacaagaaaaatataacaaaataataataaaaattgttacaa 41308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 669649 - 669604
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  669649 ttgttacaaaaataatataatctaataataataaaagttgttacaa 669604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 9616913 - 9616958
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  9616913 ttgttacaaaaataatataatctaataataataaaagttgttacaa 9616958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 9616935 - 9616984
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||  |||||||||||||| ||||||||    
T  9616935 taataataataaaagttgttacaagattaatattgagatttgaaattaat 9616984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 10642441 - 10642396
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  10642441 ttgttacaaaaataatataatctaataataataaaagttgttacaa 10642396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 15295603 - 15295558
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  15295603 ttgttacaaaaataatataatctaataataataaaagttgttacaa 15295558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 21119600 - 21119645
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  21119600 ttgttacaaaaataatataatctaataataataaaagttgttacaa 21119645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 30985065 - 30985020
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  30985065 ttgttacaaaaataatataatctaataataataaaagttgttacaa 30985020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 35858898 - 35858943
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  35858898 ttgttacaaaaataatataatctaataataataaaagttgttacaa 35858943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 27263564 - 27263619
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaat 104  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  27263564 taataaaaattgttacaaggataatataacctaataataataaaagttgttacaat 27263619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 34848397 - 34848455
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaatttg 107  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||||||| |||||||    
T  34848397 taataaaagttattacaatgataatataacctaataataataaaagttgttgcaatttg 34848455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 35367070 - 35367017
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  35367070 taataaaagttgttacaag-ataatataacctaataataataaaagttgttacaa 35367017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 35367034 - 35366982
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttac 101  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  35367034 taataaaagttgttacaaagataatataacctaataataataaatgttgttac 35366982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 33987640 - 33987691
Alignment:
Q  53 aaaagttgttacaaggataatataacctaataatgataaaagttgttacaat 104  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||||||||||    
T  33987640 aaaagttgtcacaaggataatataacttaataataataaaagttgttacaat 33987691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 34848463 - 34848517
Alignment:
Q  53 aaaagttgttacaaggataatataacctaataatgataaaagttgttacaatttg 107  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| | |||||||    
T  34848463 aaaagttgttacaaggatagtataacctaataataataaaagttgctgcaatttg 34848517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 18364578 - 18364527
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgtta 100  Q
    |||||||||||||| |||||||||||||| |||||||| ||||| |||||||    
T  18364578 taataaaagttgtttcaaggataatataatctaataataataaatgttgtta 18364527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 85
Target Start/End: Complemental strand, 18365452 - 18365417
Alignment:
Q  50 aataaaagttgttacaaggataatataacctaataa 85  Q
    ||||||||||||||||||||||||||||||||||||    
T  18365452 aataaaagttgttacaaggataatataacctaataa 18365417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 35367103 - 35367053
Alignment:
Q  53 aaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||| ||| ||||||||||||||||| |||| ||||||||||||||||    
T  35367103 aaaagttattagaaggataatataacctattaataataaaagttgttacaa 35367053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 14888 - 14937
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  14888 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 14937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 5409758 - 5409709
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  5409758 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 5409709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 5409780 - 5409735
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||| |||||||||| |||||||| ||||||||||||||||    
T  5409780 ttgttacaaagataatataatctaataataataaaagttgttacaa 5409735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 21913282 - 21913331
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  21913282 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 21913331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 33047837 - 33047788
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  33047837 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 33047788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 40997179 - 40997130
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  40997179 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 40997130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 41950322 - 41950371
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  41950322 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 41950371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 44926727 - 44926678
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    |||||||||||||||||||||  ||| |||||||||||||| ||||||||    
T  44926727 taatagtaataaaagttgttataaggttaatattgagatttgaaattaat 44926678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 50902156 - 50902205
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  50902156 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 50902205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 27263658 - 27263698
Alignment:
Q  185 taataaaagttgttacgaggataatattgagattttaaatt 225  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  27263658 taataaaagttgttataaggataatattgagattttaaatt 27263698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 14601200 - 14601146
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||||| ||||||||  |||||| |||||| || ||||||    
T  14601200 taataaaagttgttacaaggaaaatataacaaaataataataaaaattattacaa 14601146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 40316822 - 40316871
Alignment:
Q  53 aaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||| ||||||||||||||||||| | ||||||| ||||||||||||||||    
T  40316822 aaaatttgttacaaggataatatatc-taataataataaaagttgttacaa 40316871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 45691889 - 45691943
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||| ||||| ||||||||  |||||| |||||| |||||||||    
T  45691889 taataaaagttgttagaaggaaaatataacaaaataataataaaaattgttacaa 45691943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 14866 - 14911
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  14866 ttgttacaaaaataatataatctaataataataaaagttgttacaa 14911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 14600351 - 14600302
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| | | |||||||||||||| ||||||||    
T  14600351 taataataataaaagttgttacaaagttaatattgagatttgaaattaat 14600302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 19286377 - 19286328
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||  |||||||||||||| ||||||||    
T  19286377 taataataataaaagttgttacaagattaatattgagatttgaaattaat 19286328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 19286399 - 19286354
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  19286399 ttgttacaaaaataatataatctaataataataaaagttgttacaa 19286354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 21913260 - 21913305
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  21913260 ttgttacaaaaataatataatctaataataataaaagttgttacaa 21913305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 33047859 - 33047814
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  33047859 ttgttacaaaaataatataatctaataataataaaagttgttacaa 33047814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 35367003 - 35366955
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| ||||||| |||||||| || ||||||||||||||||||||||||    
T  35367003 taataataataaatgttgttactag-ataatattgagattttaaattaat 35366955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 78
Target Start/End: Original strand, 40316854 - 40316883
Alignment:
Q  49 taataaaagttgttacaaggataatataac 78  Q
    ||||||||||||||||||||||||||||||    
T  40316854 taataaaagttgttacaaggataatataac 40316883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 40997201 - 40997156
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  40997201 ttgttacaaaaataatataatctaataataataaaagttgttacaa 40997156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 41950300 - 41950345
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  41950300 ttgttacaaaaataatataatctaataataataaaagttgttacaa 41950345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 50902134 - 50902179
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  50902134 ttgttacaaaaataatataatctaataataataaaagttgttacaa 50902179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 33987736 - 33987768
Alignment:
Q  68 gataatataacctaataatgataaaagttgtta 100  Q
    ||||||||||||||||||| |||||||||||||    
T  33987736 gataatataacctaataataataaaagttgtta 33987768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 43871313 - 43871262
Alignment:
Q  52 taaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  43871313 taaaagttgttacaaggataatataacttaataataataaaagttgttacaa 43871262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 42553971 - 42553921
Alignment:
Q  53 aaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  42553971 aaaagtttttacaaggataatataacctaataataataaaagttgttacaa 42553921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 5616887 - 5616837
Alignment:
Q  50 aataaaagttgttacaaggataatataacctaataatgataaaagttgtta 100  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  5616887 aataaaagttgttacaaagataatataacctaataataataaatgttgtta 5616837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 38285941 - 38285887
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||| |||| | ||||||| ||||||||||||||||||||||||||||    
T  38285941 taataaaagttattacgatgataatacaacctaataatgataaaagttgttacaa 38285887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 45326383 - 45326432
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    |||||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  45326383 taatagtaataaaagttgttacaaggttaatattgagatttgaaattaat 45326432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 9171408 - 9171357
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgtta 100  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||| |||||||    
T  9171408 taataaaagttgtttcaaggataatataacttaataataataaatgttgtta 9171357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 37486395 - 37486344
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgtta 100  Q
    ||||||||||||||  |||||||||||||||||||||| ||||| |||||||    
T  37486395 taataaaagttgtttaaaggataatataacctaataataataaatgttgtta 37486344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 86298 - 86244
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||| |||||| |||||||||||  ||||||| |||||||    
T  86298 taataaaagttgttacaagaataatacaacctaataatattaaaagtcgttacaa 86244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 17153676 - 17153622
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||||| ||||||||  |||||| |||||| |||||||||    
T  17153676 taataaaagttgttacaaggaaaatataacaaaataataataaaaattgttacaa 17153622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 27247228 - 27247186
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataa 91  Q
    |||||||||||||||||||||||||||||| ||||||| ||||    
T  27247228 taataaaagttgttacaaggataatataacttaataataataa 27247186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 28137423 - 28137473
Alignment:
Q  178 ttaatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    |||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  28137423 ttaataataataaaagttgttacaaggttaatattgagatttgaaattaat 28137473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 34041671 - 34041725
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||||||||||||||||||||| | |||||||  ||| |||||||||||    
T  34041671 taataaaagttgttacaaggataatatatcataataatagtaacagttgttacaa 34041725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 86172 - 86127
Alignment:
Q  183 agtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||||||| |||||||| | |||||||||||||||||||||||||    
T  86172 agtaataaatgttgttacaaagataatattgagattttaaattaat 86127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 5617025 - 5616984
Alignment:
Q  50 aataaaagttgttacaaggataatataacctaataatgataa 91  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  5617025 aataaaagttgttacaaagataatataacctaataataataa 5616984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 9302810 - 9302761
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  9302810 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 9302761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 12391819 - 12391868
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  12391819 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 12391868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 27247188 - 27247139
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||| ||||||||||| ||| |||||||||||||||||||||||    
T  27247188 taataataattaaagttgttacaaggttaatattgagattttaaattaat 27247139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 35466817 - 35466768
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  35466817 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 35466768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 35860562 - 35860611
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  35860562 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 35860611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 36213329 - 36213276
Alignment:
Q  50 aataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||||| ||||| ||||||||| | ||||||| ||||||    
T  36213329 aataaaagttgttacaaggatgatatagcctaataataaaaaaagttattacaa 36213276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 38285832 - 38285783
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| ||||||| |||||||  |||||||||||||||||||||||||||    
T  38285832 taataataataaatgttgttataaggataatattgagattttaaattaat 38285783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 38285857 - 38285812
Alignment:
Q  55 aagttgttacaaggataatataacctaataatgataaaagttgtta 100  Q
    |||||||| ||||||||||||||||||||||| ||||| |||||||    
T  38285857 aagttgtttcaaggataatataacctaataataataaatgttgtta 38285812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 42453295 - 42453246
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  42453295 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 42453246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 42553853 - 42553812
Alignment:
Q  50 aataaaagttgttacaaggataatataacctaataatgataa 91  Q
    ||||||||||||| ||||||||||||||||||||||| ||||    
T  42553853 aataaaagttgtttcaaggataatataacctaataataataa 42553812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 43871188 - 43871147
Alignment:
Q  50 aataaaagttgttacaaggataatataacctaataatgataa 91  Q
    ||||||||||||| ||||||||||||||||||||||| ||||    
T  43871188 aataaaagttgtttcaaggataatataacctaataataataa 43871147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 5616857 - 5616809
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaa 227  Q
    ||||| ||||||| |||||||  ||||||||||||||||||||||||||    
T  5616857 taataataataaatgttgttataaggataatattgagattttaaattaa 5616809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 34041492 - 34041532
Alignment:
Q  53 aaaagttgttacaaggataatataacctaataatgataaaa 93  Q
    |||||||| ||||||||||||||||||||||||| ||||||    
T  34041492 aaaagttgctacaaggataatataacctaataataataaaa 34041532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 36213184 - 36213141
Alignment:
Q  185 taataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||||| |||||||  |||||||||||||||||||||||||||    
T  36213184 taataaatgttgttataaggataatattgagattttaaattaat 36213141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 5617158 - 5617108
Alignment:
Q  53 aaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||| ||||| ||| ||||||||||||||||||| ||||| ||||||||||    
T  5617158 aaaaattgttgcaaagataatataacctaataataataaaggttgttacaa 5617108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 26275369 - 26275419
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgtt 99  Q
    |||||||| ||||| ||||||||||||||| ||||||| ||||| ||||||    
T  26275369 taataaaatttgtttcaaggataatataacttaataataataaatgttgtt 26275419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 26275399 - 26275449
Alignment:
Q  178 ttaatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    |||||| ||||||| ||||||   |||||||||||||||||||||||||||    
T  26275399 ttaataataataaatgttgttgtaaggataatattgagattttaaattaat 26275449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 39271383 - 39271325
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaatgtagagata 237  Q
    ||||| || |||| ||||||||  |||||||||||||||||||||||||| || |||||    
T  39271383 taataatactaaatgttgttacatggataatattgagattttaaattaatctaaagata 39271325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 39272057 - 39272011
Alignment:
Q  50 aataaaagttgttacaaggataatataacctaataatgataaaagtt 96  Q
    |||||||||||||| | |||||||||||||| ||||| |||||||||    
T  39272057 aataaaagttgttaaagggataatataacctgataataataaaagtt 39272011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 45326271 - 45326325
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||| ||||| ||||||||  |||||| |||||| |||||||||    
T  45326271 taataaaagttgttataaggaaaatataacaaaataataataaaaattgttacaa 45326325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 9302832 - 9302787
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  9302832 ttgttacaaaaataatataatctaataataataaaagttgttacaa 9302787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 12391797 - 12391842
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  12391797 ttgttacaaaaataatataatctaataataataaaagttgttacaa 12391842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 28137402 - 28137447
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||| ||||||||||  ||||||| ||||||||||||||||    
T  28137402 ttgttacaaagataatataatttaataataataaaagttgttacaa 28137447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 35466839 - 35466794
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  35466839 ttgttacaaaaataatataatctaataataataaaagttgttacaa 35466794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 37426231 - 37426276
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  37426231 ttgttacaaaaataatataatctaataataataaaagttgttacaa 37426276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 37426253 - 37426302
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||  |||||||||||||| ||||||||    
T  37426253 taataataataaaagttgttacaagtttaatattgagatttgaaattaat 37426302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 37486364 - 37486315
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| ||||||| |||||||  | |||||||||||||||||||||||||    
T  37486364 taataataataaatgttgttataaagataatattgagattttaaattaat 37486315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 39271414 - 39271361
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttaca 102  Q
    ||||||||||||||  || |||||||||||||||||||  |||| |||||||||    
T  39271414 taataaaagttgttttaaagataatataacctaataatactaaatgttgttaca 39271361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 41759666 - 41759617
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||| ||||| ||| |||||||||||||| ||||||||    
T  41759666 taataataataaaagtcgttacaaggttaatattgagatttgaaattaat 41759617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 42453317 - 42453272
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  42453317 ttgttacaaaaataatataatctaataataataaaagttgttacaa 42453272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 43871149 - 43871100
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| ||||||| |||| ||  |||||||||||||||||||||||||||    
T  43871149 taataataataaatgttgctataaggataatattgagattttaaattaat 43871100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 17153563 - 17153511
Alignment:
Q  185 taataaaagttgttacgaggataatattgagattttaaattaatgtagagata 237  Q
    |||||||||||||||| ||| | |||||||||||| |||||||| || |||||    
T  17153563 taataaaagttgttacaaggttgatattgagatttgaaattaatttaaagata 17153511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 34306184 - 34306130
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  34306184 taataaaagttattacaagtataatataacctaataataataaaagttgttacaa 34306130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 34306147 - 34306093
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| || ||||||    
T  34306147 taataaaagttgttacaagcataatataacctaataataataaaatttattacaa 34306093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 43623285 - 43623321
Alignment:
Q  50 aataaaagttgttacaaggataatataacctaataat 86  Q
    |||||||||||||||||||||||||||||||||||||    
T  43623285 aataaaagttgttacaaggataatataacctaataat 43623321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 17306583 - 17306637
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||||||||||| |||||||||||||||  || |||||| |||||||||    
T  17306583 taataaaagttgttacaaagataatataacctaaagataataaaaattgttacaa 17306637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 34306077 - 34306028
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| | ||||||||||||||||||| |||||    
T  34306077 taataataataaaagttgttacaacgataatattgagattttaatttaat 34306028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 43055400 - 43055351
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  43055400 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 43055351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 43637586 - 43637627
Alignment:
Q  50 aataaaagttgttacaaggataatataacctaataatgataa 91  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  43637586 aataaaagttgttacaaggataatataacctagtaataataa 43637627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 50579683 - 50579634
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  50579683 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 50579634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 9398507 - 9398559
Alignment:
Q  185 taataaaagttgttacgaggataatattgagattttaaattaatgtagagata 237  Q
    |||||||||||||||| | | ||||||||||||||||||||||| || |||||    
T  9398507 taataaaagttgttacaatgttaatattgagattttaaattaatttaaagata 9398559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 17306620 - 17306664
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaa 93  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||||    
T  17306620 taataaaaattgttacaaggataatataacttaataatgaaaaaa 17306664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 43995726 - 43995690
Alignment:
Q  50 aataaaagttgttacaaggataatataacctaataat 86  Q
    ||||||||||||||||||||||||||||| |||||||    
T  43995726 aataaaagttgttacaaggataatataacttaataat 43995690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 52869438 - 52869481
Alignment:
Q  185 taataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||||| |||||||  |||||||||||||||||||||||||||    
T  52869438 taataaatgttgttataaggataatattgagattttaaattaat 52869481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 33112997 - 33113055
Alignment:
Q  45 aacctaataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||||||| | ||||||||  |||||| ||||||  ||||||||    
T  33112997 aacctaataaaagttgttacaagaaaaatataacaaaataataataaaaaatgttacaa 33113055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 43055430 - 43055377
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||| |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  43055430 taataaaa-ttgttacaaaaataatataatctaataataataaaagttgttacaa 43055377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 25699817 - 25699768
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| |||  ||||||||||||| ||||||||    
T  25699817 taataataataaaagttgttacaaggtaaatattgagatttgaaattaat 25699768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 50579705 - 50579660
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  50579705 ttgttacaaaaataatataatctaataataataaaagttgttacaa 50579660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 12110380 - 12110430
Alignment:
Q  178 ttaatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  12110380 ttaatagtaataaaagttgttacaaggataacattaagattttaaattaat 12110430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 14123790 - 14123749
Alignment:
Q  50 aataaaagttgttacaaggataatataacctaataatgataa 91  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  14123790 aataaaagttgttacaaggataatataacctaataataataa 14123749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 43749005 - 43748962
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaa 92  Q
    |||||||||||||| ||||||||||||||||||||||| |||||    
T  43749005 taataaaagttgtttcaaggataatataacctaataataataaa 43748962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 26758740 - 26758686
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||| | ||||||||| |||||| |||||| |||||||||    
T  26758740 taataaaagttgttacaagaaaaatataaccaaataataataaaaattgttacaa 26758686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 2378403 - 2378452
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  2378403 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 2378452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 4599343 - 4599392
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  4599343 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 4599392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 12110337 - 12110404
Alignment:
Q  39 atagataacctaat---aaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||   |||| ||||||||||||||||||||  ||||| | ||||||||||||||||    
T  12110337 atagataacctaatgataaaacttgttacaaggataatataatttaatagtaataaaagttgttacaa 12110404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 12391626 - 12391675
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  12391626 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 12391675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 26758600 - 26758551
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  26758600 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 26758551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 30591428 - 30591379
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  30591428 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 30591379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 30887240 - 30887289
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  30887240 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 30887289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 34852590 - 34852541
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  34852590 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 34852541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 11929363 - 11929331
Alignment:
Q  54 aaagttgttacaaggataatataacctaataat 86  Q
    |||||||||||||||||||||||||||||||||    
T  11929363 aaagttgttacaaggataatataacctaataat 11929331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 86
Target Start/End: Original strand, 11941886 - 11941921
Alignment:
Q  51 ataaaagttgttacaaggataatataacctaataat 86  Q
    ||||||||||||||||||||||||||| ||||||||    
T  11941886 ataaaagttgttacaaggataatataatctaataat 11941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 11910347 - 11910313
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaat 83  Q
    ||||||||||||||||||||||||||||| |||||    
T  11910347 taataaaagttgttacaaggataatataatctaat 11910313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 103
Target Start/End: Complemental strand, 11910364 - 11910330
Alignment:
Q  69 ataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||||||||||| ||||||||||||||||    
T  11910364 ataatataacctaataataataaaagttgttacaa 11910330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 11941307 - 11941341
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaat 83  Q
    |||||||||||||||||||||||||||||| ||||    
T  11941307 taataaaagttgttacaaggataatataacataat 11941341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 34740737 - 34740791
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||||||||||| || ||| ||||  ||||||||||||| |||||||||    
T  34740737 taataaaagttgttacaaagaaaatgtaacaaaataatgataaaaattgttacaa 34740791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 4599321 - 4599366
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  4599321 ttgttacaaaaataatataatctaataataataaaagttgttacaa 4599366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 12391604 - 12391649
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  12391604 ttgttacaaaaataatataatctaataataataaaagttgttacaa 12391649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 26758622 - 26758577
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  26758622 ttgttacaaaaataatataatctaataataataaaagttgttacaa 26758577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 30591450 - 30591405
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  30591450 ttgttacaaaaataatataatctaataataataaaagttgttacaa 30591405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 30887218 - 30887263
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  30887218 ttgttacaaaaataatataatctaataataataaaagttgttacaa 30887263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 31960522 - 31960473
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||  ||| |||||||||||||| ||||||||    
T  31960522 taataataataaaagttgttataaggttaatattgagatttgaaattaat 31960473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 34852612 - 34852567
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  34852612 ttgttacaaaaataatataatctaataataataaaagttgttacaa 34852567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 45264037 - 45264086
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||  | | |||||||||||||||||||||||    
T  45264037 taataataataaaagttgttataaagttaatattgagattttaaattaat 45264086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 12505261 - 12505297
Alignment:
Q  186 aataaaagttgttacgaggataatattgagattttaa 222  Q
    |||| |||||||||| |||||||||||||||||||||    
T  12505261 aatagaagttgttacaaggataatattgagattttaa 12505297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 17508653 - 17508706
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||||||||||| ||||||||||||||||||| || |||||||||||||    
T  17508653 taataaaagttgttacaaagataatataacctaataataat-aaagttgttacaa 17508706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 13504670 - 13504617
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttaca 102  Q
    |||||||||||||||||| |||||||||||||||||||  ||||| ||||||||    
T  13504670 taataaaagttgttacaatgataatataacctaataatattaaaatttgttaca 13504617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 13507494 - 13507452
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataa 91  Q
    ||||||||||||||| |||||||||||||||||||||| ||||    
T  13507494 taataaaagttgttagaaggataatataacctaataataataa 13507452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 17508616 - 17508670
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||||||||||||||| | |||| ||| |||| ||||||||||||||||    
T  17508616 taataaaagttgttacaaggatgacataaactactaataataaaagttgttacaa 17508670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 2523864 - 2523815
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  2523864 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 2523815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 10838997 - 10838948
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  10838997 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 10838948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 25087229 - 25087278
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  25087229 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 25087278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 25510597 - 25510646
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  25510597 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 25510646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 30592635 - 30592586
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  30592635 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 30592586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 7807374 - 7807324
Alignment:
Q  178 ttaatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| ||||||||    
T  7807374 ttaataataataaaagttgttacaaggttaatactgagatttaaaattaat 7807324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 25510490 - 25510544
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||||| ||||||||  |||||| |||| | |||||||||    
T  25510490 taataaaagttgttacaaggaaaatataacaaaataataataataattgttacaa 25510544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 2523886 - 2523841
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  2523886 ttgttacaaaaataatataatctaataataataaaagttgttacaa 2523841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 25087207 - 25087252
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  25087207 ttgttacaaaaataatataatctaataataataaaagttgttacaa 25087252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 25510575 - 25510620
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  25510575 ttgttacaaaaataatataatctaataataataaaagttgttacaa 25510620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 26047007 - 26047056
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| ||| |||||||||||| ||| |||||||||||||| ||||||||    
T  26047007 taataataaaaaaagttgttacaaggttaatattgagatttgaaattaat 26047056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 34783742 - 34783791
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| ||||||||||| |||| ||| |||||||||||||| ||||||||    
T  34783742 taataataataaaagttattacaaggttaatattgagatttgaaattaat 34783791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 19183878 - 19183920
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataa 91  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  19183878 taataaaagttgttacaaggataatataacctaataataataa 19183920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 19914757 - 19914703
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||||| ||||||||| | |||| ||||||||||||||||    
T  19914757 taataaaagttgttacaaggacaatataaccaactaataataaaagttgttacaa 19914703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 27551673 - 27551631
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataa 91  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  27551673 taataaaagttgttacaaggataatataacctaataataataa 27551631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 30548421 - 30548475
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||  |||||||||| ||||||| ||||||||||||||||    
T  30548421 taataaaagttgttacaaaaataatataacttaataataataaaagttgttacaa 30548475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 35234045 - 35234098
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  35234045 taataaaagttgttacaaa-ataatataacctaataataataaaagttgttacaa 35234098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 1757225 - 1757170
Alignment:
Q  49 taataaaagttgttacaaggataata-taacctaataatgataaaagttgttacaa 103  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||||    
T  1757225 taataaaagttgttacaaagataatactaacctaataataataaatgttgttacaa 1757170  T

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Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 1757193 - 1757144
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| ||||||| |||||||| | |||||||||||||||||||||||||    
T  1757193 taataataataaatgttgttacaaagataatattgagattttaaattaat 1757144  T

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Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 20254792 - 20254841
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  20254792 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 20254841  T

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Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 26496752 - 26496703
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  26496752 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 26496703  T

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Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 27551609 - 27551560
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| ||||||||||| |||  |||||||||||||||||||||||||||    
T  27551609 taataataataaaagttattataaggataatattgagattttaaattaat 27551560  T

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Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 34150764 - 34150715
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  34150764 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 34150715  T

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Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 35234122 - 35234171
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| ||||||| |||||||| | |||||||||||||||||||||||||    
T  35234122 taataataataaatgttgttacaaagataatattgagattttaaattaat 35234171  T

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Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 36668246 - 36668295
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  36668246 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 36668295  T

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Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 49318599 - 49318648
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  49318599 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 49318648  T

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Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 3075289 - 3075246
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaa 92  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||    
T  3075289 taataaaagttgttacaatgatgatataacctaataataataaa 3075246  T

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Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 30548451 - 30548510
Alignment:
Q  178 ttaatagtaataaaagttgttacgaggataatattgagattttaaattaatgtagagata 237  Q
    |||||| |||||||||||||||| ||| | ||||||| ||||||||||||| || |||||    
T  30548451 ttaataataataaaagttgttacaaggttcatattgaaattttaaattaatctatagata 30548510  T

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Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 3151001 - 3151046
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  3151001 ttgttacaaaaataatataatctaataataataaaagttgttacaa 3151046  T

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Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 3151023 - 3151072
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||  |||||||||||||| ||||||||    
T  3151023 taataataataaaagttgttacaagactaatattgagatttgaaattaat 3151072  T

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Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 16335484 - 16335537
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttaca 102  Q
    ||||||||||||||||||| | ||||||||  |||||| |||||| ||||||||    
T  16335484 taataaaagttgttacaagaaaaatataacaaaataataataaaaattgttaca 16335537  T

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Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 21232877 - 21232926
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||  ||| |||||||||||||| ||||||||    
T  21232877 taataataataaaagttgttaaaaggttaatattgagatttgaaattaat 21232926  T

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Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 26496774 - 26496729
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  26496774 ttgttacaaaaataatataatctaataataataaaagttgttacaa 26496729  T

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Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 34150786 - 34150741
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  34150786 ttgttacaaaaataatataatctaataataataaaagttgttacaa 34150741  T

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Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 36668224 - 36668269
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  36668224 ttgttacaaaaataatataatctaataataataaaagttgttacaa 36668269  T

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Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 49318577 - 49318622
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  49318577 ttgttacaaaaataatataatctaataataataaaagttgttacaa 49318622  T

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Target: scaffold0365 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 1068 - 1117
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  1068 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 1117  T

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Target: scaffold0365; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 1046 - 1091
Alignment:
Q  58 ttgttacaaggataatataacctaataatgataaaagttgttacaa 103  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||||    
T  1046 ttgttacaaaaataatataatctaataataataaaagttgttacaa 1091  T

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Target: scaffold0088 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 41445 - 41482
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataat 86  Q
    |||||||||||||| |||||||||||||||||||||||    
T  41445 taataaaagttgtttcaaggataatataacctaataat 41482  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 95327 - 95376
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaat 228  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||||||||    
T  95327 taataataataaaagttgttacaaggttaatattgagatttgaaattaat 95376  T

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Target: scaffold0294 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 5822 - 5764
Alignment:
Q  179 taatagtaataaaagttgttacgaggataatattgagattttaaattaatgtagagata 237  Q
    |||||||||||||  ||||||  |||||| |||||||||||||||||||| ||| ||||    
T  5822 taatagtaataaatcttgttataaggatattattgagattttaaattaatctagggata 5764  T

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Target: scaffold0079 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 57376 - 57323
Alignment:
Q  49 taataaaagttgttacaaggataatataacctaataatgataaaagttgttaca 102  Q
    ||||||||||||||||||| | ||||||||  |||||| |||||| ||||||||    
T  57376 taataaaagttgttacaagaaaaatataacaaaataataataaaaattgttaca 57323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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