View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1376_low_5 (Length: 808)

Name: NF1376_low_5
Description: NF1376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1376_low_5
NF1376_low_5
[»] chr3 (5 HSPs)
chr3 (9-779)||(49700736-49701507)
chr3 (380-422)||(44745943-44745985)
chr3 (380-421)||(30852117-30852158)
chr3 (384-422)||(12761589-12761627)
chr3 (380-422)||(43303830-43303872)
[»] chr1 (6 HSPs)
chr1 (380-422)||(6127948-6127990)
chr1 (13-80)||(2242434-2242501)
chr1 (380-418)||(34228946-34228984)
chr1 (380-422)||(36428785-36428827)
chr1 (379-418)||(44486123-44486162)
chr1 (380-422)||(31605809-31605851)
[»] chr4 (6 HSPs)
chr4 (380-421)||(25414177-25414218)
chr4 (380-421)||(55256161-55256202)
chr4 (380-422)||(33867375-33867417)
chr4 (380-421)||(46295170-46295211)
chr4 (380-422)||(2732067-2732109)
chr4 (380-422)||(26356890-26356932)
[»] chr8 (4 HSPs)
chr8 (381-421)||(3078607-3078647)
chr8 (379-422)||(27557605-27557648)
chr8 (380-422)||(11793482-11793524)
chr8 (384-417)||(35475542-35475575)
[»] chr7 (3 HSPs)
chr7 (379-422)||(48125136-48125179)
chr7 (380-419)||(38374563-38374602)
chr7 (380-422)||(45559264-45559306)
[»] chr2 (5 HSPs)
chr2 (380-422)||(21213842-21213884)
chr2 (380-419)||(27967113-27967152)
chr2 (380-422)||(6099480-6099522)
chr2 (384-422)||(41908599-41908637)
chr2 (380-421)||(32106639-32106680)
[»] chr6 (4 HSPs)
chr6 (381-422)||(23242060-23242101)
chr6 (380-418)||(3869768-3869806)
chr6 (379-421)||(24333987-24334029)
chr6 (383-412)||(24762379-24762408)
[»] chr5 (2 HSPs)
chr5 (380-418)||(902234-902272)
chr5 (385-422)||(28131219-28131256)


Alignment Details
Target: chr3 (Bit Score: 656; Significance: 0; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 656; E-Value: 0
Query Start/End: Original strand, 9 - 779
Target Start/End: Original strand, 49700736 - 49701507
Alignment:
Q  9 gagatgaaggcggagtattttcctccaaaggaagatgtgattttggataatgaagcaccaacagacttttatgtttttgtcaccggtgccgcggtaagaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  49700736 gagatgaaggcggagtattttcctccaaaggaagatgtgattttggataatgaagcaccaacagacttttatatttttgtcaccggtgccgcggtaggaa 49700835  T
Q  109 actataccccattaatctcttacttcattttattttttgataagatatgtttccaattaaagctgttttatacatcattcattactgcttttatgaagnn 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  49700836 actataccccattaatctcttacttcattttattttttgataagatatgtttccaattaaagctgttttatacatcattcattactgcttttatgaagaa 49700935  T
Q  209 nnnnntgctttcaatttagttatactagttaagcagtttctatcacactgatgtagacttcaccaacatcaaactccaaactgactattagtttttaaaa 308  Q
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  49700936 aaaaatgctttcaatttagttatactagttaagcagtttctatcacactgatgtagacttcaccaacatcaaactccacactgactattagtttttaaaa 49701035  T
Q  309 taatattttgaaattagcttatgcatttcaatttttcagaagttctactgtttaaattttcttaagt-atgaattctccccggtgccaattttggtgggc 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49701036 taatattttgaaattagcttatgcatttcaatttttcagaagttctactgtttaaattttcttaagtaatgaattctccccggtgccaattttggtgggc 49701135  T
Q  408 tagtttggcttcttcnnnnnnnnnnnnncttttgttaagtaatgtggcaaattaatttgagtttcaagaatgnnnnnnnntaattgtcaggagagtttta 507  Q
    |||||||||||||||             ||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  49701136 tagtttggcttcttcaaaaaaaaaaaaacttttgttaagtaatgtggcaaattaatttgagtttcaagaatgaaaaaaaataattgtcaggagagtttta 49701235  T
Q  508 tcccatccattgacttgagttagtcataattcgacgtgatatttgaacattgaggataacaacataagaaaggagtcatgttgcaagtgaagttaagtaa 607  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  49701236 tcccatccattgacttgagttagtcataattcgacgtgatatttgaacattgaggataacaacataagaaaggagtcatgtttcaagtgaagttaagtaa 49701335  T
Q  608 tttaaaaatctgcattttattgtggctgtgtttaattttcctttgaacgtatacacaatttgtatttctcaaatgtctttttctataatatagggggaaa 707  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49701336 tttaaaaatctgcattttattgtggctgtgattaattttcctttgaacgtatacacaatttgtatttctcaaatgtctttttctataatatagggggaaa 49701435  T
Q  708 atgcaaactgaaccttcctttttcttttgagtaacaggaacttatcaaacgggtgaatggagtagaacatgt 779  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  49701436 atgcaaactgaaccttcctttttcttttgagttacaggaacttatcaaacgggtgaatggagtagaacatgt 49701507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 422
Target Start/End: Complemental strand, 44745985 - 44745943
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  44745985 attctccccagtgccaattttggtaggctagtttggcttcttc 44745943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 30852158 - 30852117
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttctt 421  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  30852158 attctccccggtaccaattttggtgggctagtttagcttctt 30852117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 12761589 - 12761627
Alignment:
Q  384 tccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  12761589 tccccggtgccaatttaggtgggctagttttgcttcttc 12761627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 422
Target Start/End: Original strand, 43303830 - 43303872
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    |||||||||||||| ||| | ||||||||||||||||||||||    
T  43303830 attctccccggtgctaatatcggtgggctagtttggcttcttc 43303872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 380 - 422
Target Start/End: Complemental strand, 6127990 - 6127948
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6127990 attctccccggtgccaattttggtgggctagtttggcttcttc 6127948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 2242501 - 2242434
Alignment:
Q  13 tgaaggcggagtattttcctccaaaggaagatgtgattttggataatgaagcaccaacagacttttat 80  Q
    ||||||| |||| |||||||||||||||||||||  | ||| | |||||| |||||||||||||||||    
T  2242501 tgaaggctgagttttttcctccaaaggaagatgtagtcttgcagaatgaatcaccaacagacttttat 2242434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 418
Target Start/End: Original strand, 34228946 - 34228984
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggctt 418  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  34228946 attctctccggtgccaattttggtgggctagtttggctt 34228984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 422
Target Start/End: Original strand, 36428785 - 36428827
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    |||||||||||||||||||| ||||||||||||| ||||||||    
T  36428785 attctccccggtgccaatttgggtgggctagttttgcttcttc 36428827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 379 - 418
Target Start/End: Complemental strand, 44486162 - 44486123
Alignment:
Q  379 aattctccccggtgccaattttggtgggctagtttggctt 418  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  44486162 aattctccccggtgccaatttcggtgggttagtttggctt 44486123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 422
Target Start/End: Complemental strand, 31605851 - 31605809
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    |||||||||||||||||||| ||||||||||||| || |||||    
T  31605851 attctccccggtgccaatttgggtgggctagtttagcctcttc 31605809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000005; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 25414218 - 25414177
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttctt 421  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  25414218 attctccccggtgccaattttggtgggttagtttggcttctt 25414177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 55256202 - 55256161
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttctt 421  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  55256202 attctcctcggtgccaattttggtgggctagtttggcttctt 55256161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 422
Target Start/End: Original strand, 33867375 - 33867417
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    |||||||||||||||||||| ||||||||||||||| ||||||    
T  33867375 attctccccggtgccaatttcggtgggctagtttggtttcttc 33867417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 421
Target Start/End: Original strand, 46295170 - 46295211
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttctt 421  Q
    |||||||||||||||||||| ||||||||||||| |||||||    
T  46295170 attctccccggtgccaatttgggtgggctagtttagcttctt 46295211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 422
Target Start/End: Original strand, 2732067 - 2732109
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||    
T  2732067 attctctccggtgccaatttgggtgggctagtttagcttcttc 2732109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 422
Target Start/End: Original strand, 26356890 - 26356932
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    ||||||||| |||||||||| ||||||||||||| ||||||||    
T  26356890 attctccccagtgccaatttaggtgggctagtttagcttcttc 26356932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 381 - 421
Target Start/End: Original strand, 3078607 - 3078647
Alignment:
Q  381 ttctccccggtgccaattttggtgggctagtttggcttctt 421  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  3078607 ttctccccggtgccaattttggtgggctagtttagcttctt 3078647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 379 - 422
Target Start/End: Complemental strand, 27557648 - 27557605
Alignment:
Q  379 aattctccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    ||||||||||||||||||||| |||||| |||||||||||||||    
T  27557648 aattctccccggtgccaatttcggtggggtagtttggcttcttc 27557605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 422
Target Start/End: Complemental strand, 11793524 - 11793482
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||    
T  11793524 attcttcccggtgccaatttgggtgggctagtttagcttcttc 11793482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 417
Target Start/End: Complemental strand, 35475575 - 35475542
Alignment:
Q  384 tccccggtgccaattttggtgggctagtttggct 417  Q
    |||||||||||||||| |||||||||||||||||    
T  35475575 tccccggtgccaatttcggtgggctagtttggct 35475542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000008; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 379 - 422
Target Start/End: Complemental strand, 48125179 - 48125136
Alignment:
Q  379 aattctccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    |||| |||||||||||||||| ||||||||||||||||||||||    
T  48125179 aattttccccggtgccaatttcggtgggctagtttggcttcttc 48125136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 419
Target Start/End: Complemental strand, 38374602 - 38374563
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttc 419  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  38374602 attctccccggtgccaatttaggtgggctagtttagcttc 38374563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 422
Target Start/End: Original strand, 45559264 - 45559306
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    ||||||||||||||||||||||||||| || |||| |||||||    
T  45559264 attctccccggtgccaattttggtgggttaatttgacttcttc 45559306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000003; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 422
Target Start/End: Original strand, 21213842 - 21213884
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    |||||||||||||||||||| ||||||||||||| ||||||||    
T  21213842 attctccccggtgccaatttaggtgggctagttttgcttcttc 21213884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 419
Target Start/End: Complemental strand, 27967152 - 27967113
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttc 419  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  27967152 attctccccggtggcaattttggtgggttagtttggcttc 27967113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 422
Target Start/End: Complemental strand, 6099522 - 6099480
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    |||||||||| ||||||| | ||||||||||||||||||||||    
T  6099522 attctccccgctgccaatatcggtgggctagtttggcttcttc 6099480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 384 - 422
Target Start/End: Complemental strand, 41908637 - 41908599
Alignment:
Q  384 tccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  41908637 tccccggtgccaatttgggtgggctagtttagcttcttc 41908599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 380 - 421
Target Start/End: Original strand, 32106639 - 32106680
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggcttctt 421  Q
    |||||| |||||||||||||  ||||||||||||||||||||    
T  32106639 attctctccggtgccaatttcagtgggctagtttggcttctt 32106680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.000000001; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 422
Target Start/End: Original strand, 23242060 - 23242101
Alignment:
Q  381 ttctccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  23242060 ttctccccggtgccaatttgggtgggctagtttagcttcttc 23242101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 418
Target Start/End: Original strand, 3869768 - 3869806
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggctt 418  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  3869768 attctccccggtgccaatattggtgggatagtttggctt 3869806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 379 - 421
Target Start/End: Complemental strand, 24334029 - 24333987
Alignment:
Q  379 aattctccccggtgccaattttggtgggctagtttggcttctt 421  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||    
T  24334029 aattctcaccggtgccaatttgggtgggctagtttagcttctt 24333987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 383 - 412
Target Start/End: Complemental strand, 24762408 - 24762379
Alignment:
Q  383 ctccccggtgccaattttggtgggctagtt 412  Q
    ||||||||||||||||||||||||||||||    
T  24762408 ctccccggtgccaattttggtgggctagtt 24762379  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 418
Target Start/End: Complemental strand, 902272 - 902234
Alignment:
Q  380 attctccccggtgccaattttggtgggctagtttggctt 418  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  902272 attctccccaatgccaattttggtgggctagtttggctt 902234  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 385 - 422
Target Start/End: Original strand, 28131219 - 28131256
Alignment:
Q  385 ccccggtgccaattttggtgggctagtttggcttcttc 422  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  28131219 ccccgatgccaattttggtgggctagtttagcttcttc 28131256  T

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