View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1376_low_54 (Length: 410)
Name: NF1376_low_54
Description: NF1376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1376_low_54 |
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Alignment Details
Target: chr7 (Bit Score: 359; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 8 - 382
Target Start/End: Complemental strand, 38070152 - 38069778
Alignment:
| Q |
8 |
ccaacaatatcaatagtattctctcagaagctttgcaaagcccaacttcaattctagacactagaatgttatccccttatggttttggttatccactttt |
107 |
Q |
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| T |
38070152 |
ccaacaataacaatagtattctctcagaagctttgaaaagcccaacttcaattcttgacactagaatgttatccccttatggttttggttatccactttt |
38070053 |
T |
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| Q |
108 |
ttatgacaacaaaatccaaactgttccaaacaaaacattctcatcaaaaggcattggtcttgctcttataggtaaccttaaggatgatgaatcaattgat |
207 |
Q |
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| T |
38070052 |
ttatgacaacaaaatccaaactgttccaaacaaaacattctcatcaaaaggcattggtcttgctcttataggtaaccttaaggatgatgaatcaattgat |
38069953 |
T |
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| Q |
208 |
gagaataattctgttgaacaaaacaaaggaaatgttttgtttggaacacaattaagagttaaagtaccaactatgccatctcctatatattctccatttg |
307 |
Q |
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| T |
38069952 |
gagaataattctgttgaacaaaacaaaggaaatgttttgtttggaacacaattaagagttaaagtaccaactttgccatctcctatatattctccatttg |
38069853 |
T |
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| Q |
308 |
agtctcaaaccaaaaccaaagatacaaaaaattccaaacttctttctttgagtgagatggagctttgtgaggaat |
382 |
Q |
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| T |
38069852 |
agtctcaaaccaaaaccaaagatacaaaaaattccaaacttctttctttgagtgagatggagctttgtgaggaat |
38069778 |
T |
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