View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1376_low_72 (Length: 359)
Name: NF1376_low_72
Description: NF1376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1376_low_72 |
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Alignment Details
Target: chr8 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 30 - 350
Target Start/End: Original strand, 38366699 - 38367019
Alignment:
| Q |
30 |
ctcccaagagctttcatgggattttctaagcagagaaacggtgtcaattagtaatttggtaaggcgtggtttttctggagaatctttggccacattttgg |
129 |
Q |
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| T |
38366699 |
ctcccaagagctttcatgggattttctaagcagagaaacggtgtcaattagtaatttggtaaggcgtggtttttctggagaatctgtggccacattttgg |
38366798 |
T |
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| Q |
130 |
ccaccttcatcagcaggggttacatgctggaattggagaattaccaagatgctaaaaacaagaaaaagtttattttccatgctaatgctaattnnnnnnn |
229 |
Q |
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| T |
38366799 |
ccaccttcatcagcaggggttacatgctggaattggagaattaccaagatgccaaaaagaagaaaaagtttattttccatgctaatgctaattaaaaaaa |
38366898 |
T |
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| Q |
230 |
ctaattgttcaaggttagagagatgagaaacttatgctaagttatatggcttgtttggtacttggaagttagcacaacctctccttttaacacgttctac |
329 |
Q |
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| T |
38366899 |
ctaattgttcaaggttagagagatgagaaacttatgctaaggtatatggcttgtttggtacttggaagttagcacaacctttccttttaacacgttctac |
38366998 |
T |
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| Q |
330 |
tacgtggtgggactttcatct |
350 |
Q |
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||||||||||||||||||||| |
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| T |
38366999 |
tacgtggtgggactttcatct |
38367019 |
T |
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