View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1377-INSERTION-4 (Length: 150)
Name: NF1377-INSERTION-4
Description: NF1377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1377-INSERTION-4 |
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| [»] chr8 (2 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 60; Significance: 6e-26; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 39476041 - 39476104
Alignment:
| Q |
87 |
agaaaaactgctatttgcttcttcatatactcgtaatcgctctccaactaatccaacatgtaat |
150 |
Q |
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| T |
39476041 |
agaaaaaatgctatttgcttcttcatatactcgtaatcgctctccaactaatccaacatgtaat |
39476104 |
T |
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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 39476008 - 39476043
Alignment:
| Q |
18 |
taaggtctcaagccacaccatcagaccaatataaga |
53 |
Q |
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| T |
39476008 |
taaggtctcaagccacaccatcagaccaatataaga |
39476043 |
T |
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