View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13771_high_75 (Length: 266)
Name: NF13771_high_75
Description: NF13771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13771_high_75 |
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Alignment Details
Target: chr4 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 43876373 - 43876118
Alignment:
| Q |
1 |
tcttcataatcgtcttaccatgcttgaatctgtgacccatttgcatctttctattgaaaatgaaaacttcattgtcgaagttcccaaacaagttgttgtg |
100 |
Q |
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| T |
43876373 |
tcttcataatcgtcttacgatgcttgaatctgtgacccatttgcatctttctattgaaaatgaaaacttcattgtcgaagttcccaaacaagttgttgtg |
43876274 |
T |
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| Q |
101 |
aaagaaccgaaatcattcgatttaggcacaattgaggaactgggtttgaggtttcctgtcattgcaaaacctttggaagctaacagcactgttgattctc |
200 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43876273 |
aaagaaccgaaatcattcgatttaggcgcaattgaggaactgggtttgaggtttcctgtcattgcaaaacctttggaagctaacagcactgttgattctc |
43876174 |
T |
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| Q |
201 |
acaatctgtttctagtttttgattttgacggtgttaagtcgttgaataatcctatg |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43876173 |
acaatctgtttctagtttttgattttgacggtgttaagtcgttgaataatcctatg |
43876118 |
T |
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