View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13771_high_78 (Length: 254)
Name: NF13771_high_78
Description: NF13771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13771_high_78 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 16 - 242
Target Start/End: Complemental strand, 36516347 - 36516121
Alignment:
| Q |
16 |
aaatcaactgcggagactaattccttgggagcagataaagccaatgaagatgaagaagaagtatctgaagatgaagatgaataatggatggacgggaagg |
115 |
Q |
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| T |
36516347 |
aaatcaactgcggagaataattccttcggagcagataaagccaatgaagatgaagaagaagtatctgaagatgaagatgaataatggatggacgggaagg |
36516248 |
T |
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| Q |
116 |
agtcggagaagatggagcgatgagaggatgggaaggtggagatgagtgacgtggcggaggggttattgagagatggccatgtggaggtgatgattttttg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36516247 |
agtcggagaagatggagcgatgagaggatgggaaggtggagatgagtgacgtggcggaggggttattgagagatggccatgtggaggtgatgattttttg |
36516148 |
T |
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| Q |
216 |
ccataggtggtgttctgtgcacaggtt |
242 |
Q |
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||||||||||||||||||||| ||||| |
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| T |
36516147 |
ccataggtggtgttctgtgcagaggtt |
36516121 |
T |
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