View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13771_high_99 (Length: 233)

Name: NF13771_high_99
Description: NF13771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13771_high_99
NF13771_high_99
[»] chr4 (57 HSPs)
chr4 (1-118)||(37012943-37013060)
chr4 (1-118)||(35376187-35376304)
chr4 (1-118)||(9619004-9619122)
chr4 (1-118)||(3018035-3018154)
chr4 (1-118)||(38574204-38574322)
chr4 (1-118)||(46046660-46046778)
chr4 (1-118)||(15640740-15640857)
chr4 (1-118)||(9396723-9396841)
chr4 (5-118)||(9516850-9516964)
chr4 (1-118)||(9396935-9397052)
chr4 (1-118)||(48259987-48260104)
chr4 (1-135)||(3273856-3273995)
chr4 (1-118)||(38573993-38574110)
chr4 (1-118)||(31943973-31944092)
chr4 (1-100)||(34064218-34064318)
chr4 (1-118)||(9516634-9516752)
chr4 (1-79)||(26252332-26252410)
chr4 (1-118)||(37012731-37012849)
chr4 (1-117)||(7819040-7819156)
chr4 (32-117)||(12904772-12904857)
chr4 (1-118)||(13132177-13132293)
chr4 (1-117)||(4355907-4356023)
chr4 (5-137)||(34063981-34064120)
chr4 (4-118)||(9619218-9619333)
chr4 (2-117)||(36888917-36889031)
chr4 (5-118)||(31090301-31090415)
chr4 (1-118)||(31944186-31944304)
chr4 (4-118)||(35376367-35376481)
chr4 (1-118)||(4356117-4356234)
chr4 (1-136)||(15640951-15641094)
chr4 (1-76)||(18713027-18713102)
chr4 (1-118)||(26252473-26252591)
chr4 (1-99)||(13131983-13132083)
chr4 (1-73)||(3273692-3273764)
chr4 (1-73)||(7819250-7819322)
chr4 (1-98)||(31090104-31090203)
chr4 (1-118)||(48580102-48580220)
chr4 (1-118)||(3018248-3018364)
chr4 (1-118)||(41947092-41947208)
chr4 (5-89)||(18713200-18713284)
chr4 (5-100)||(48579908-48580004)
chr4 (2-118)||(43312233-43312350)
chr4 (1-118)||(46046454-46046566)
chr4 (3-118)||(43313450-43313565)
chr4 (32-85)||(31083364-31083417)
chr4 (3-118)||(36887704-36887820)
chr4 (32-118)||(48259847-48259935)
chr4 (3-110)||(20069538-20069644)
chr4 (2-117)||(12520662-12520780)
chr4 (1-57)||(18667375-18667431)
chr4 (47-118)||(41946989-41947058)
chr4 (1-72)||(18667525-18667596)
chr4 (3-110)||(31082217-31082324)
chr4 (4-98)||(20068494-20068588)
chr4 (37-103)||(36699496-36699562)
chr4 (55-118)||(12904874-12904938)
chr4 (32-65)||(9516773-9516806)
[»] chr8 (45 HSPs)
chr8 (1-118)||(10108394-10108512)
chr8 (1-118)||(17623123-17623240)
chr8 (1-118)||(14820319-14820436)
chr8 (1-118)||(5554893-5555011)
chr8 (1-118)||(21147960-21148079)
chr8 (1-118)||(14820530-14820648)
chr8 (1-118)||(42113009-42113126)
chr8 (1-118)||(43851689-43851806)
chr8 (1-118)||(43481550-43481669)
chr8 (1-118)||(10108606-10108724)
chr8 (1-118)||(21148172-21148290)
chr8 (1-106)||(30789743-30789849)
chr8 (1-118)||(5555105-5555223)
chr8 (1-118)||(7689759-7689877)
chr8 (5-118)||(10171383-10171497)
chr8 (1-118)||(26136709-26136827)
chr8 (1-118)||(30789532-30789649)
chr8 (1-118)||(42605779-42605895)
chr8 (1-118)||(14767530-14767649)
chr8 (1-76)||(2583387-2583462)
chr8 (1-117)||(26532807-26532925)
chr8 (1-84)||(26136921-26137004)
chr8 (32-118)||(42606020-42606107)
chr8 (1-120)||(2583556-2583677)
chr8 (3-118)||(17622914-17623027)
chr8 (1-98)||(14767743-14767838)
chr8 (1-100)||(22494431-22494526)
chr8 (1-107)||(22494620-22494726)
chr8 (1-118)||(7689548-7689665)
chr8 (1-118)||(21144741-21144859)
chr8 (1-118)||(42113220-42113335)
chr8 (37-106)||(38726723-38726793)
chr8 (25-118)||(18044089-18044181)
chr8 (1-69)||(43851900-43851968)
chr8 (11-118)||(44162687-44162795)
chr8 (3-118)||(40487653-40487768)
chr8 (45-112)||(35367440-35367509)
chr8 (37-99)||(38728007-38728069)
chr8 (22-119)||(21144597-21144697)
chr8 (35-100)||(39888523-39888589)
chr8 (32-98)||(28977663-28977730)
chr8 (32-79)||(39889629-39889676)
chr8 (32-65)||(17623050-17623083)
chr8 (46-100)||(17721011-17721061)
chr8 (36-100)||(20875740-20875803)
[»] chr5 (47 HSPs)
chr5 (1-118)||(7126153-7126271)
chr5 (1-119)||(6817357-6817476)
chr5 (1-118)||(23979137-23979255)
chr5 (1-118)||(24074327-24074445)
chr5 (1-118)||(14143926-14144043)
chr5 (1-118)||(17762307-17762424)
chr5 (1-118)||(6817147-6817264)
chr5 (1-118)||(14411721-14411839)
chr5 (8-118)||(41001596-41001706)
chr5 (1-135)||(4919226-4919366)
chr5 (1-118)||(7125942-7126059)
chr5 (1-117)||(31799876-31799992)
chr5 (1-117)||(18336492-18336610)
chr5 (1-118)||(24650935-24651053)
chr5 (1-118)||(24837405-24837523)
chr5 (1-118)||(27159193-27159308)
chr5 (1-118)||(29444830-29444948)
chr5 (1-118)||(20709448-20709565)
chr5 (155-220)||(25779163-25779228)
chr5 (1-112)||(17762518-17762630)
chr5 (1-118)||(30512312-30512429)
chr5 (1-118)||(30552652-30552769)
chr5 (5-117)||(14411906-14412018)
chr5 (4-111)||(24837200-24837308)
chr5 (7-135)||(31799641-31799776)
chr5 (1-111)||(24074538-24074649)
chr5 (1-118)||(993774-993889)
chr5 (1-118)||(14144137-14144255)
chr5 (35-112)||(18336726-18336804)
chr5 (1-144)||(4918981-4919132)
chr5 (1-117)||(20709235-20709354)
chr5 (4-111)||(993985-994093)
chr5 (1-118)||(41001380-41001495)
chr5 (5-118)||(27159015-27159128)
chr5 (32-118)||(29445073-29445159)
chr5 (14-118)||(22571101-22571206)
chr5 (1-118)||(24650726-24650842)
chr5 (4-112)||(20959330-20959437)
chr5 (4-112)||(41424546-41424655)
chr5 (37-107)||(28070501-28070570)
chr5 (1-112)||(37281857-37281965)
chr5 (1-118)||(22571313-22571431)
chr5 (32-75)||(32233967-32234010)
chr5 (22-60)||(20947059-20947097)
chr5 (3-85)||(28071735-28071817)
chr5 (32-65)||(18336638-18336671)
chr5 (41-110)||(41425727-41425798)
[»] chr1 (49 HSPs)
chr1 (1-135)||(39711075-39711214)
chr1 (1-135)||(24467863-24468001)
chr1 (1-118)||(4907198-4907316)
chr1 (1-118)||(18462310-18462427)
chr1 (1-118)||(29696589-29696706)
chr1 (5-118)||(33628930-33629044)
chr1 (1-118)||(24467653-24467770)
chr1 (1-118)||(29696794-29696911)
chr1 (1-118)||(42510039-42510156)
chr1 (1-118)||(34749341-34749459)
chr1 (1-118)||(39711308-39711426)
chr1 (1-118)||(48071985-48072103)
chr1 (1-118)||(52058035-52058153)
chr1 (13-118)||(52058256-52058362)
chr1 (1-118)||(39826286-39826400)
chr1 (1-112)||(8292834-8292946)
chr1 (1-118)||(39970881-39971000)
chr1 (4-118)||(17606328-17606447)
chr1 (1-118)||(4906986-4907104)
chr1 (1-135)||(39826051-39826192)
chr1 (1-118)||(17606544-17606660)
chr1 (1-118)||(20995904-20996021)
chr1 (1-118)||(34749162-34749279)
chr1 (1-135)||(8293043-8293185)
chr1 (1-112)||(43539377-43539489)
chr1 (1-118)||(18462520-18462638)
chr1 (5-98)||(30299276-30299369)
chr1 (1-118)||(33628714-33628832)
chr1 (1-118)||(48072197-48072315)
chr1 (2-118)||(17501967-17502083)
chr1 (35-117)||(30252168-30252251)
chr1 (1-118)||(30299467-30299585)
chr1 (1-98)||(39970689-39970788)
chr1 (1-118)||(42510250-42510369)
chr1 (1-65)||(20995747-20995811)
chr1 (1-72)||(13229803-13229874)
chr1 (1-135)||(13229967-13230109)
chr1 (7-118)||(18342261-18342371)
chr1 (5-98)||(16294187-16294281)
chr1 (1-73)||(7473862-7473934)
chr1 (3-118)||(17500793-17500909)
chr1 (32-110)||(27039670-27039748)
chr1 (44-79)||(215191-215226)
chr1 (40-118)||(26266439-26266518)
chr1 (22-65)||(42510167-42510210)
chr1 (32-64)||(34749300-34749332)
chr1 (39-110)||(37236750-37236822)
chr1 (39-110)||(43400785-43400857)
chr1 (32-64)||(48072144-48072176)
[»] scaffold0117 (1 HSPs)
scaffold0117 (1-118)||(12218-12336)
[»] chr7 (51 HSPs)
chr7 (1-118)||(41600194-41600312)
chr7 (1-118)||(12006776-12006894)
chr7 (1-118)||(28218399-28218517)
chr7 (1-118)||(6465879-6465996)
chr7 (1-118)||(20963731-20963847)
chr7 (1-118)||(28218202-28218321)
chr7 (1-118)||(23704686-23704803)
chr7 (1-118)||(23704897-23705014)
chr7 (1-118)||(7658205-7658319)
chr7 (1-118)||(1250442-1250560)
chr7 (1-118)||(38879960-38880075)
chr7 (1-118)||(48672515-48672633)
chr7 (1-118)||(12006565-12006682)
chr7 (1-118)||(16995224-16995341)
chr7 (1-118)||(20458716-20458833)
chr7 (1-117)||(25772567-25772684)
chr7 (1-135)||(20419537-20419678)
chr7 (1-118)||(23383736-23383854)
chr7 (1-118)||(44816857-44816977)
chr7 (5-118)||(20419776-20419891)
chr7 (1-110)||(24195032-24195142)
chr7 (1-118)||(10409610-10409727)
chr7 (1-118)||(48648465-48648581)
chr7 (1-118)||(48672301-48672421)
chr7 (1-118)||(25772388-25772505)
chr7 (1-74)||(31851475-31851548)
chr7 (36-112)||(7842470-7842546)
chr7 (1-118)||(38879747-38879866)
chr7 (1-118)||(7657993-7658113)
chr7 (1-118)||(20458927-20459044)
chr7 (1-118)||(41599982-41600100)
chr7 (1-118)||(20963518-20963637)
chr7 (1-118)||(10409399-10409516)
chr7 (1-118)||(23383523-23383642)
chr7 (1-136)||(31851241-31851381)
chr7 (3-110)||(14800894-14801002)
chr7 (3-110)||(15247886-15247994)
chr7 (1-98)||(48648306-48648403)
chr7 (1-76)||(1250273-1250348)
chr7 (40-110)||(14630368-14630437)
chr7 (40-110)||(14795582-14795652)
chr7 (40-110)||(15242574-15242644)
chr7 (40-110)||(14646924-14646996)
chr7 (47-118)||(6466087-6466159)
chr7 (35-110)||(33131665-33131741)
chr7 (1-85)||(33162771-33162855)
chr7 (1-72)||(44817071-44817142)
chr7 (32-85)||(24194921-24194975)
chr7 (32-65)||(23704843-23704876)
chr7 (24-65)||(48648416-48648457)
chr7 (21-65)||(24194973-24195017)
[»] chr3 (61 HSPs)
chr3 (1-118)||(52552924-52553042)
chr3 (1-118)||(14262272-14262390)
chr3 (1-118)||(33372430-33372548)
chr3 (1-107)||(47575508-47575614)
chr3 (5-118)||(30500281-30500394)
chr3 (1-118)||(14171822-14171940)
chr3 (1-118)||(16722015-16722133)
chr3 (1-118)||(45969939-45970057)
chr3 (3-106)||(43572629-43572732)
chr3 (1-118)||(9266999-9267117)
chr3 (1-118)||(14161895-14162013)
chr3 (1-135)||(19113001-19113142)
chr3 (1-118)||(20853932-20854049)
chr3 (2-118)||(43572413-43572533)
chr3 (1-118)||(30500067-30500183)
chr3 (1-99)||(4204752-4204850)
chr3 (1-118)||(5800629-5800747)
chr3 (1-118)||(14262060-14262178)
chr3 (1-118)||(14171611-14171728)
chr3 (4-119)||(45003519-45003635)
chr3 (1-111)||(17649246-17649356)
chr3 (1-118)||(35995914-35996029)
chr3 (19-118)||(49986551-49986652)
chr3 (1-118)||(14162107-14162224)
chr3 (1-118)||(15328696-15328815)
chr3 (1-118)||(19112788-19112907)
chr3 (1-98)||(21632940-21633038)
chr3 (1-118)||(21633132-21633250)
chr3 (5-118)||(38283574-38283688)
chr3 (1-79)||(38283786-38283864)
chr3 (1-118)||(9267211-9267328)
chr3 (1-118)||(45003732-45003849)
chr3 (1-118)||(11003756-11003874)
chr3 (1-75)||(35995746-35995820)
chr3 (1-98)||(52552734-52552834)
chr3 (2-118)||(32998371-32998486)
chr3 (1-119)||(33372641-33372759)
chr3 (1-98)||(15328507-15328602)
chr3 (1-118)||(16722227-16722345)
chr3 (36-118)||(36990931-36991013)
chr3 (36-118)||(37016371-37016453)
chr3 (14-118)||(17465616-17465721)
chr3 (43-118)||(19720357-19720433)
chr3 (1-118)||(20853719-20853838)
chr3 (33-118)||(45970183-45970270)
chr3 (1-118)||(49986764-49986882)
chr3 (32-118)||(5800872-5800958)
chr3 (3-118)||(35740841-35740955)
chr3 (3-118)||(35741823-35741938)
chr3 (1-117)||(17465392-17465510)
chr3 (35-117)||(45058761-45058843)
chr3 (3-117)||(36989861-36989975)
chr3 (3-117)||(37015301-37015415)
chr3 (7-107)||(32997242-32997342)
chr3 (1-56)||(4204944-4204999)
chr3 (36-88)||(1068920-1068972)
chr3 (32-118)||(3425916-3426002)
chr3 (36-118)||(3424798-3424882)
chr3 (32-65)||(16722173-16722206)
chr3 (32-65)||(49986710-49986743)
chr3 (66-118)||(27946133-27946185)
[»] chr6 (33 HSPs)
chr6 (1-118)||(32017740-32017857)
chr6 (1-118)||(9481206-9481324)
chr6 (1-118)||(9854123-9854239)
chr6 (1-135)||(18500316-18500456)
chr6 (1-118)||(30617991-30618104)
chr6 (1-90)||(10321967-10322056)
chr6 (5-118)||(24731959-24732076)
chr6 (4-118)||(26385302-26385417)
chr6 (14-136)||(19284129-19284258)
chr6 (1-98)||(14680927-14681024)
chr6 (1-117)||(33637586-33637701)
chr6 (1-118)||(2299545-2299667)
chr6 (1-118)||(3230099-3230216)
chr6 (33-113)||(9154909-9154990)
chr6 (1-97)||(24732174-24732271)
chr6 (14-118)||(26385523-26385628)
chr6 (1-118)||(33714507-33714629)
chr6 (1-85)||(30458959-30459043)
chr6 (1-112)||(32017570-32017678)
chr6 (22-118)||(17142700-17142798)
chr6 (1-98)||(9481418-9481516)
chr6 (1-118)||(10321757-10321872)
chr6 (5-118)||(30459141-30459253)
chr6 (5-85)||(30618201-30618281)
chr6 (2-118)||(14681119-14681236)
chr6 (32-110)||(21069546-21069626)
chr6 (32-110)||(21070803-21070883)
chr6 (1-68)||(33637764-33637831)
chr6 (1-59)||(18500583-18500641)
chr6 (37-108)||(15941337-15941409)
chr6 (32-65)||(17142801-17142834)
chr6 (32-65)||(26385441-26385474)
chr6 (29-65)||(30618112-30618148)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-118)||(15868-15982)
[»] chr2 (45 HSPs)
chr2 (1-118)||(22263427-22263547)
chr2 (1-118)||(26236151-26236269)
chr2 (7-118)||(19251495-19251606)
chr2 (1-107)||(23854902-23855008)
chr2 (1-118)||(26135841-26135959)
chr2 (1-117)||(17463117-17463233)
chr2 (4-118)||(34548598-34548712)
chr2 (1-118)||(39878126-39878244)
chr2 (1-118)||(20498771-20498887)
chr2 (1-118)||(22263216-22263333)
chr2 (1-118)||(17850822-17850940)
chr2 (1-119)||(15106303-15106420)
chr2 (1-118)||(19251706-19251823)
chr2 (1-118)||(26560790-26560909)
chr2 (1-112)||(42670955-42671067)
chr2 (1-119)||(15106090-15106209)
chr2 (1-106)||(20498981-20499087)
chr2 (1-118)||(23806188-23806306)
chr2 (1-118)||(17850611-17850728)
chr2 (1-118)||(26236331-26236448)
chr2 (1-118)||(17463327-17463445)
chr2 (14-118)||(13254521-13254626)
chr2 (1-98)||(26560600-26560696)
chr2 (1-73)||(23806022-23806094)
chr2 (1-118)||(30390483-30390601)
chr2 (34-118)||(23854712-23854797)
chr2 (1-118)||(33290285-33290401)
chr2 (6-118)||(13254677-13254790)
chr2 (1-118)||(33290073-33290191)
chr2 (2-118)||(12418960-12419076)
chr2 (2-118)||(12431020-12431136)
chr2 (1-118)||(26136053-26136171)
chr2 (37-110)||(23046739-23046813)
chr2 (36-118)||(30959943-30960025)
chr2 (37-110)||(44098894-44098968)
chr2 (11-111)||(42670748-42670851)
chr2 (5-118)||(13284648-13284767)
chr2 (36-118)||(21482151-21482233)
chr2 (32-118)||(30958708-30958794)
chr2 (1-65)||(39878338-39878402)
chr2 (1-67)||(13284484-13284550)
chr2 (45-111)||(34548705-34548771)
chr2 (32-88)||(5928337-5928393)
chr2 (3-118)||(21481025-21481141)
chr2 (21-65)||(33290231-33290275)
[»] scaffold0809 (2 HSPs)
scaffold0809 (5-98)||(1455-1548)
scaffold0809 (1-118)||(1646-1760)
[»] scaffold0449 (2 HSPs)
scaffold0449 (1-118)||(7435-7554)
scaffold0449 (32-118)||(7250-7337)
[»] scaffold0141 (2 HSPs)
scaffold0141 (1-112)||(8558-8670)
scaffold0141 (1-118)||(8349-8465)
[»] scaffold0361 (3 HSPs)
scaffold0361 (1-118)||(4799-4916)
scaffold0361 (1-118)||(4586-4705)
scaffold0361 (32-65)||(4745-4778)
[»] scaffold0185 (2 HSPs)
scaffold0185 (2-118)||(3893-4010)
scaffold0185 (1-98)||(4105-4203)
[»] scaffold0477 (1 HSPs)
scaffold0477 (5-118)||(4988-5101)
[»] scaffold0881 (2 HSPs)
scaffold0881 (1-112)||(249-362)
scaffold0881 (1-108)||(455-561)
[»] scaffold0352 (2 HSPs)
scaffold0352 (3-112)||(4697-4807)
scaffold0352 (35-112)||(5948-6027)
[»] scaffold0157 (1 HSPs)
scaffold0157 (2-117)||(137-255)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-106)||(27625-27730)


Alignment Details
Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 37012943 - 37013060
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||| ||||||||||    
T  37012943 atgcagattttgctgacgtgatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatctaatttttttttatacagggactaaaacc 37013042  T
Q  101 agaattcgctaaaattac 118  Q
    |||||||||||| |||||    
T  37013043 agaattcgctaatattac 37013060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 35376304 - 35376187
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||| || ||||||||| ||||||||||    
T  35376304 atgcggattctgctgacgtgatgaaaggagagaccaaaagtggaagaatctaaaattacagagacaaaatctaaatcttttttttacagggactaaaacc 35376205  T
Q  101 agaattcgctaaaattac 118  Q
    |||||||||||| |||||    
T  35376204 agaattcgctaatattac 35376187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 9619122 - 9619004
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  9619122 atgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttgtttttacagggactaaaac 9619023  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  9619022 cggaattcgctaatattac 9619004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 3018154 - 3018035
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||  |||| ||||||| | ||||||||    
T  3018154 atgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttaccgggactaaaa 3018055  T
Q  99 ccagaattcgctaaaattac 118  Q
    || ||||||||||| |||||    
T  3018054 ccggaattcgctaatattac 3018035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 38574204 - 38574322
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| | ||||||| |||||||||    
T  38574204 atgcagattttgttgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttatttacagggactaaaac 38574303  T
Q  100 cagaattcgctaaaattac 118  Q
    ||||||||||||| |||||    
T  38574304 cagaattcgctaatattac 38574322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 46046660 - 46046778
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| |||||||||    
T  46046660 atgcagattttgctgacgtgatgaaaggagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaac 46046759  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  46046760 cggaattcgctaatattac 46046778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 15640857 - 15640740
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||| |||||||||| ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||| || |||||||||  |||||||||    
T  15640857 atgcatattctgctgatgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacaaaatctaaatcttttttttacaggaactaaaacc 15640758  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  15640757 ggaattcgctaatattac 15640740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 9396841 - 9396723
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| ||||||||||||||||| ||| |||| |||||||||||||     
T  9396841 atgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatttgaaattatagggacaaaatctaaatcttttttttaacagagactaaaat 9396742  T
Q  100 cagaattcgctaaaattac 118  Q
    |  |||||||||| |||||    
T  9396741 cgaaattcgctaatattac 9396723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 9516850 - 9516964
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccaga 103  Q
    ||||| || |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||  |    
T  9516850 agattttgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagagactaaaaccgaa 9516949  T
Q  104 attcgctaaaattac 118  Q
    ||||||||| |||||    
T  9516950 attcgctaatattac 9516964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9396935 - 9397052
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||| || || ||  | ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  9396935 atgcagattctgctgacgtgttggaatgatggtccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaacc 9397034  T
Q  101 agaattcgctaaaattac 118  Q
     ||||| ||||| |||||    
T  9397035 ggaatttgctaatattac 9397052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 48259987 - 48260104
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||| ||||||||||||| || ||| || ||||||||||||||| |||||||||||||||||||||||||| || |||||||||||| ||||| |    
T  48259987 atgcagattatgctgacgtgatggaatgagcgatcaaaagtggaagaatttgaaattacagggacaaaatctaaatcttttttttacagagattaaaatc 48260086  T
Q  101 agaattcgctaaaattac 118  Q
    | |||||||||| |||||    
T  48260087 aaaattcgctaatattac 48260104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 3273856 - 3273995
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||||| |||||||| ||||| ||| || |||||||||||||||||||||||||||||| ||||||||||| || |||||| || ||||||||||    
T  3273856 atgcagattctactgacgtggtgaaatgagggatcaaaagtggaagaatctgaaattacagggataaaatctaaatcttttttttatagggactaaaacc 3273955  T
Q  101 agaattcgctaaaatt-----acgaaaagaggtatttacc 135  Q
      |||||||||| |||     |||||||||||||||||||    
T  3273956 gaaattcgctaatattacgggacgaaaagaggtatttacc 3273995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 38574110 - 38573993
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||| || || ||| |||||||||||||||||| |||||||||||||||||||||||||| || ||||||||| || ||||| |    
T  38574110 atgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggattaaaatc 38574011  T
Q  101 agaattcgctaaaattac 118  Q
     |||||| |||| |||||    
T  38574010 ggaattcactaatattac 38573993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31944092 - 31943973
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||| || || ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||  |||| | |||||||  |||||||    
T  31944092 atgcaggttttgttgacgtgatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttatttacaggaactaaaa 31943993  T
Q  99 ccagaattcgctaaaattac 118  Q
    || ||||||||||| |||||    
T  31943992 ccggaattcgctaatattac 31943973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 34064218 - 34064318
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||| |||  ||||||||| | ||||||    
T  34064218 atgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatcttttattttacagaaattaaaac 34064317  T
Q  100 c 100  Q
    |    
T  34064318 c 34064318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 9516752 - 9516634
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||| ||||| || || ||| |||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||  |||||||||    
T  9516752 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacaaggactaaaac 9516653  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  9516652 cggaattcgctaatattac 9516634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26252410 - 26252332
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaatttt 79  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26252410 atgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaattttt 26252332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 37012849 - 37012731
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||| || ||  || ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||  |||| |||     
T  37012849 atgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacaaggactgaaat 37012750  T
Q  100 cagaattcgctaaaattac 118  Q
     |||||||||||| |||||    
T  37012749 tagaattcgctaatattac 37012731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 7819156 - 7819040
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| | || |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||  |||||||||    
T  7819156 atgcagattttactaacgtgatgaaaggaggaaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttaca-tgactaaaac 7819058  T
Q  100 cagaattcgctaaaatta 117  Q
    | ||||||||||| ||||    
T  7819057 cggaattcgctaatatta 7819040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 12904857 - 12904772
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgctaaaatta 117  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||    
T  12904857 gaccaaaagtggaagaatctgaaattataaggacaaaatctaaattttttttttacagggactaaaaccaaaattcgctaatatta 12904772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 13132177 - 13132293
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||||||||||  ||||||||| || |||||||||||||||||| |||||||||||||||| ||||||||| || ||||||||| |||||||| |    
T  13132177 atgcagattctgctgatttgatgaaagaagggaccaaaagtggaagaatatgaaattacagggacagaatctaaatcttttttttacag-gactaaaatc 13132275  T
Q  101 agaattcgctaaaattac 118  Q
      |||||||||| |||||    
T  13132276 gaaattcgctaatattac 13132293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 4356023 - 4355907
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| ||||||||||| ||| ||||||||||| |||||| ||||||||||  |||||||||||||  || |||||||||  |||||||||    
T  4356023 atgcagattctgctaacgtgatgaaatgagggaccaaaagtgaaagaatatgaaattacatagacaaaatctaaagcttgtttttacaggaactaaaacc 4355924  T
Q  101 agaattcgctaaaatta 117  Q
     ||||||||||| ||||    
T  4355923 ggaattcgctaatatta 4355907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 34064120 - 34063981
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccaga 103  Q
    |||||| ||||| ||| || || ||| |||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||| ||||||||| |||    
T  34064120 agattcggctgatgtggtggaatgagggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatctttttttttacagggactaaaactaga 34064021  T
Q  104 attcgctaaaatt------acgaaaagaggtatttaccta 137  Q
    ||||| ||| |||      |||||||||||||||||||||    
T  34064020 attcgttaatattacagggacgaaaagaggtatttaccta 34063981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 9619218 - 9619333
Alignment:
Q  4 cagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccag 102  Q
    ||||||||||| ||||| || || ||  |||||||||||||||||| |||||||||| ||||||||||||||| ||| ||| ||||| ||||||||||||    
T  9619218 cagattctgcttacgtggtggaatgaaggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttctacagggactaaaaccag 9619317  T
Q  103 aattcgctaaaattac 118  Q
    |||||||||| |||||    
T  9619318 aattcgctaatattac 9619333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 36888917 - 36889031
Alignment:
Q  2 tgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacca 101  Q
    ||||||||||||||||  | | ||| ||| ||| ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  36888917 tgcagattctgctgacaaggttaaacgagggactaaaagtggaggaatctgaaattacagggacataatctaaattttttttttacag-gactaaaacca 36889015  T
Q  102 gaattcgctaaaatta 117  Q
     |||||||||| ||||    
T  36889016 aaattcgctaatatta 36889031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 31090301 - 31090415
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaa-attttatttttacagagactaaaaccaga 103  Q
    |||||||  |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||  |||| ||||||||| |||||||| |  |    
T  31090301 agattctattgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaattttttttttttacagggactaaaatcgaa 31090400  T
Q  104 attcgctaaaattac 118  Q
    ||||||||| |||||    
T  31090401 attcgctaatattac 31090415  T

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Target: chr4; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 31944186 - 31944304
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||| ||||||| || || ||| ||| |||||||||||||| |||||||||| ||||||||||||| | ||| |||||||||||||||||||    
T  31944186 atgcagattctgttgacgtggtggaatgagggacaaaaagtggaagaatatgaaattacatggacaaaatctaattatttttttttacagagactaaaac 31944285  T
Q  100 cagaattcgctaaaattac 118  Q
    |  |||||||||| |||||    
T  31944286 cgaaattcgctaatattac 31944304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 35376367 - 35376481
Alignment:
Q  4 cagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccaga 103  Q
    |||||| |||||||||| || || ||| |||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||| |||||||||  ||    
T  35376367 cagattttgctgacgtggtggaatgagggaccaaaagtggaagattctgaaattacagggacaaaatttaaatcttttttttacagggactaaaactgga 35376466  T
Q  104 attcgctaaaattac 118  Q
    ||| ||||| |||||    
T  35376467 atttgctaatattac 35376481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4356117 - 4356234
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||| || ||  || |||||||||||||||||| ||||||||||| ||||||||| || |||| || ||||||||| |||||||    
T  4356117 atgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatttgaaattacagagacaaaatcaaattttttttattacagagattaaaacc 4356216  T
Q  101 agaattcgctaaaattac 118  Q
      |||||||||| |||||    
T  4356217 gaaattcgctaatattac 4356234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 15640951 - 15641094
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    ||||| |||||||||||||| ||||| |||  |||||||||||||||||||||||||||||||||| ||||||||  |||| |||||||||  | |||||    
T  15640951 atgcatattctgctgacgtggtgaaatgaggaaccaaaagtggaagaatctgaaattacagggacataatctaaatcttttttttttacaggaattaaaa 15641050  T
Q  99 ccagaattcgctaaaatt------acgaaaagaggtatttacct 136  Q
    || |||||| |||| |||      ||||||||||||||||||||    
T  15641051 ccggaattcactaatattacaaggacgaaaagaggtatttacct 15641094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18713102 - 18713027
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 76  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||||||||||||    
T  18713102 atgcagattttgctgacgtgatgaaaggagggaccaaaattggaacaatatgaaattacagggacaaaatctaaat 18713027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 26252473 - 26252591
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||| ||||  || || | | |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||  ||||||||    
T  26252473 atgcagattctgcttacgtagtggaatgggggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaaaac 26252572  T
Q  100 cagaattcgctaaaattac 118  Q
      ||||||||||| |||||    
T  26252573 tggaattcgctaatattac 26252591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 13132083 - 13131983
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||||||||||||| ||||| ||| || |||||||||||||||||||||||||| | ||| ||||||||  |||| ||||||||| ||||||||    
T  13132083 atgcagattctgctgacgtggtgaaatgagggatcaaaagtggaagaatctgaaattacatgaacataatctaaatcttttttttttacagggactaaaa 13131984  T
Q  99 c 99  Q
    |    
T  13131983 c 13131983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3273764 - 3273692
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatcta 73  Q
    |||||||||||  |||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  3273764 atgcagattctaatgacttgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatcta 3273692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7819250 - 7819322
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatcta 73  Q
    |||||||||||||||||||| || || ||| |||||||||||||||||||||| |||||||||||||||||||    
T  7819250 atgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgacattacagggacaaaatcta 7819322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 31090203 - 31090104
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    ||||| |||||||| ||||| || || ||| |||||||||||||||||| |||||||||||||||||||||||||  |||| ||||||||| ||||||||    
T  31090203 atgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaaa 31090104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 48580102 - 48580220
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat--tttatttttacagagactaaaa 98  Q
    ||||| |||||||| | ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||  ||| ||||  ||| || |||||    
T  48580102 atgcatattctgctaaggtgatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaatcgttttttttatcag-gattaaaa 48580200  T
Q  99 ccagaattcgctaaaattac 118  Q
    || ||||||||||| |||||    
T  48580201 ccggaattcgctaatattac 48580220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 3018248 - 3018364
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||| |||||||||| || ||  || |||||||||||| |||||||||||||||| |||| |||||||||| || ||||||||| ||||||||||    
T  3018248 atgcagattatgctgacgtggtggaataagggaccaaaagtggtagaatctgaaattacacggac-aaatctaaatcttttttttacagggactaaaacc 3018346  T
Q  101 agaattcgctaaaattac 118  Q
      |||||| ||| |||||    
T  3018347 gaaattcgttaatattac 3018364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 41947092 - 41947208
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||| |||| | ||||||| || |||||||||||||| ||| |||||||||| ||||||||||| |||||| |||||| |  ||||||||||    
T  41947092 atgcagattctgttgactttatgaaagcagggaccaaaagtggaaaaatatgaaattacaaggacaaaatct-aattttttttttaaaaggactaaaacc 41947190  T
Q  101 agaattcgctaaaattac 118  Q
      |||||||||| |||||    
T  41947191 gaaattcgctaatattac 41947208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 18713200 - 18713284
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacag 89  Q
    |||||||||||||||| || ||  || |||||||| ||||||||||||||||||||| |||||||||||||| || |||||||||    
T  18713200 agattctgctgacgtggtggaataagggaccaaaactggaagaatctgaaattacagagacaaaatctaaatcttttttttacag 18713284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 48580004 - 48579908
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaacc 100  Q
    |||||||||||||||| || ||  || |||||||| || |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||||||    
T  48580004 agattctgctgacgtggtggaataagggaccaaaattgaaagaatctgaaattacagagacaaaatctaaatctttttttttacatagactaaaacc 48579908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 43312350 - 43312233
Alignment:
Q  2 tgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaacc 100  Q
    |||||||| |||||||  ||| ||| ||| ||| ||||||||| ||||||||||||||||||||| ||| |||| |||| ||||||||| |||||||| |    
T  43312350 tgcagattttgctgacaggattaaacgagggactaaaagtggaggaatctgaaattacagggacagaatttaaatttttttttttacagggactaaaatc 43312251  T
Q  101 agaattcgctaaaattac 118  Q
     ||||| ||||| |||||    
T  43312250 ggaatttgctaatattac 43312233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 46046566 - 46046454
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||||| || ||||| || || ||| || ||||||||||||||| |||||||||||||||||||||||     | ||||||||| |||||||| |    
T  46046566 atgcagattctactaacgtggtggaatgagggatcaaaagtggaagaatatgaaattacagggacaaaatcta-----tttttttacagggactaaaatc 46046472  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  46046471 ggaattcgctaatattac 46046454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 43313450 - 43313565
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccag 102  Q
    |||||||||||||||  | | ||  ||| |||||||||||||||||||  |||| | |||||   |||||||| ||| ||||||||| ||||||||||||    
T  43313450 gcagattctgctgacaagtttaagtgagggaccaaaagtggaagaatcacaaatgatagggatggaatctaaactttttttttacagggactaaaaccag 43313549  T
Q  103 aattcgctaaaattac 118  Q
    |||||||||| |||||    
T  43313550 aattcgctaatattac 43313565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 31083364 - 31083417
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttattttt 85  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  31083364 gaccaaaagtggaagaatctcaaatgatagggacaaaatctaaattttattttt 31083417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 36887820 - 36887704
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaacca 101  Q
    |||||||||||||||  | | ||  ||| |||||||||||||||||||| |||| | |||||   |||||||| |||| ||||||||| |||||||||||    
T  36887820 gcagattctgctgacaagtttaagtgagggaccaaaagtggaagaatctcaaatgatagggatggaatctaaacttttttttttacagggactaaaacca 36887721  T
Q  102 gaattcgctaaaattac 118  Q
     |||||||||| |||||    
T  36887720 aaattcgctaatattac 36887704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 48259935 - 48259847
Alignment:
Q  32 gaccaaaagt-ggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||||| ||| | ||||||| || ||||||| ||||||||||| |||||    
T  48259935 gaccaaaagtaggaggaatctgaaattacatggacaaaatctaaatctttttatttacagggattaaaaccggaattcgctaatattac 48259847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 20069538 - 20069644
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccag 102  Q
    ||||||||||||||| || |  || ||| |||||||||||||||||||| |||| | ||||||| |||||||| ||| ||||||||| ||| |||||  |    
T  20069538 gcagattctgctgacatgtttcaatgagagaccaaaagtggaagaatctcaaatgatagggacataatctaaacttt-tttttacagggaccaaaactgg 20069636  T
Q  103 aattcgct 110  Q
    ||||||||    
T  20069637 aattcgct 20069644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 12520780 - 12520662
Alignment:
Q  2 tgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa---ttttatttttacagagactaaaa 98  Q
    ||||||||||||||||  | | ||| |||  || ||||||||| ||||||||||||| ||||||||||||||||   |||| |||| | || ||||||||    
T  12520780 tgcagattctgctgacagggttaaacgaggaactaaaagtggaggaatctgaaattatagggacaaaatctaaactttttttttttaatagggactaaaa 12520681  T
Q  99 ccagaattcgctaaaatta 117  Q
    |  ||||||||||| ||||    
T  12520680 ctggaattcgctaatatta 12520662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18667431 - 18667375
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaatt 57  Q
    ||||||||| || ||||||||||||||||| |||||||||||||| ||| |||||||    
T  18667431 atgcagattttgttgacgtgatgaaaggagggaccaaaagtggaacaatatgaaatt 18667375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 41947058 - 41946989
Alignment:
Q  47 aatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    ||||||||||||||||||||||||||||  ||| ||||| ||| |||||||||| |||||| |||| |||||    
T  41947058 aatctgaaattacagggacaaaatctaa--tttttttttgcagggactaaaaccggaattcactaatattac 41946989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 18667525 - 18667596
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatct 72  Q
    ||||||||||| |||||||| || ||  || ||| |||| ||||||||||||||||||||||| ||||||||    
T  18667525 atgcagattctactgacgtggtggaataagggacaaaaactggaagaatctgaaattacagggtcaaaatct 18667596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 31082324 - 31082217
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccag 102  Q
    ||||||||||||||| || |  || ||| | |||||||||||||||||| |||| | ||||||| |||||||| ||| ||||||||| ||| ||| |  |    
T  31082324 gcagattctgctgacatgtttcaatgaggggccaaaagtggaagaatctcaaatgatagggacagaatctaaactttttttttacagggaccaaacctgg 31082225  T
Q  103 aattcgct 110  Q
    ||||||||    
T  31082224 aattcgct 31082217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 20068588 - 20068494
Alignment:
Q  4 cagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaa 98  Q
    |||||||||||||| || |  || ||| |||||||||||||||||||  |||| | ||||||||||||||| | || ||||||||| ||| ||||    
T  20068588 cagattctgctgacctgttacaacgagggaccaaaagtggaagaatcacaaatgatagggacaaaatctaattattttttttacagggacgaaaa 20068494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 36699496 - 36699562
Alignment:
Q  37 aaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccaga 103  Q
    ||||| ||||||||| |||||||||||||| |||||||||| | |||||| |  |||||||||||||    
T  36699496 aaagtagaagaatctaaaattacagggacataatctaaattatttttttataaggactaaaaccaga 36699562  T

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Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 12904874 - 12904938
Alignment:
Q  55 attacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||||||||||||||| ||||| ||| ||||||||| |||||||| || |||||||||| |||||    
T  12904874 attacagggacaaaatttaaatctttttttttacagggactaaaatcaaaattcgctaatattac 12904938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 9516773 - 9516806
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggac 65  Q
    ||||||||||||| ||||||||||||||||||||    
T  9516773 gaccaaaagtggaggaatctgaaattacagggac 9516806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 8e-42; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 10108512 - 10108394
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  10108512 atgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaac 10108413  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  10108412 cggaattcgctaatattac 10108394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 17623123 - 17623240
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| || |||||||||  |||||||||    
T  17623123 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatttgaaattacaaggacaaaatctaaatcttttttttacaggcactaaaacc 17623222  T
Q  101 agaattcgctaaaattac 118  Q
    |||||| ||||| |||||    
T  17623223 agaattggctaatattac 17623240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14820436 - 14820319
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| || |||||||||  |||||||||    
T  14820436 atgcagattctgctgatgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacaggaactaaaacc 14820337  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  14820336 ggaattcgctaatattac 14820319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5555011 - 5554893
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||||||| ||| ||| ||||||||| |||||||||    
T  5555011 atgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatatgaaattatagggacaaaatctgaatctttttttttacagggactaaaac 5554912  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  5554911 cggaattcgctaatattac 5554893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 21148079 - 21147960
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||||||||||||| || ||  || ||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| ||||||||    
T  21148079 atgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaa 21147980  T
Q  99 ccagaattcgctaaaattac 118  Q
    || ||||||||||| |||||    
T  21147979 ccggaattcgctaatattac 21147960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 14820530 - 14820648
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||| || ||  || |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  14820530 atgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaac 14820629  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  14820630 cggaattcgctaatattac 14820648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 42113126 - 42113009
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||| ||||| ||| ||||||||||| |||||||| |||||||||||||| ||||||||| || ||||||||| |||||||| |    
T  42113126 atgcagattctgctgacgtggtgaaatgagggaccaaaagtgaaagaatcttaaattacagggacataatctaaatcttttttttacagggactaaaatc 42113027  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  42113026 ggaattcgctaatattac 42113009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 43851806 - 43851689
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||| ||| || || ||| || |||||||||||||||||||||||||||||||||||||||||| || | ||||||| ||||||||||    
T  43851806 atgcagattctgctgatgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttgtttacagggactaaaacc 43851707  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  43851706 ggaattcgctaatattac 43851689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 43481550 - 43481669
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    ||||||||| |||||||||||| ||||||  |||||| ||||||||||| |||||||||||||||||||| ||||  |||| ||||||||||||||||||    
T  43481550 atgcagattgtgctgacgtgattaaaggaaagaccaagagtggaagaatttgaaattacagggacaaaatttaaatcttttttttttacagagactaaaa 43481649  T
Q  99 ccagaattcgctaaaattac 118  Q
    || ||||||||||| |||||    
T  43481650 ccggaattcgctaatattac 43481669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 10108606 - 10108724
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||| || ||  || |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  10108606 atgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaac 10108705  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||| ||||| |||||    
T  10108706 cggaatttgctaatattac 10108724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21148172 - 21148290
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaa-attttatttttacagagactaaaac 99  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||||||| |||||||||| |||||||||||||  |||| ||||||||| |||||||||    
T  21148172 atgcagattctgctgacatgatgaaaggagggactaaaagtggaagaatatgaaattacaaggacaaaatctaattttttttttttacagggactaaaac 21148271  T
Q  100 cagaattcgctaaaattac 118  Q
    | |||||| |||| |||||    
T  21148272 cggaattcactaatattac 21148290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 30789743 - 30789849
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| |||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| |||||||||    
T  30789743 atgcagattttgctgacgtgatgaaacgatggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaac 30789842  T
Q  100 cagaatt 106  Q
    | |||||    
T  30789843 cggaatt 30789849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 5555105 - 5555223
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| ||||||| || || ||  || |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  5555105 atgcagattttgctgacatggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagagactaaaac 5555204  T
Q  100 cagaattcgctaaaattac 118  Q
    |  |||||||||| |||||    
T  5555205 cgaaattcgctaatattac 5555223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 7689759 - 7689877
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||| || || ||| || |||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||  ||||||||     
T  7689759 atgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatttaaatctttttttttacacggactaaaat 7689858  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  7689859 cggaattcgctaatattac 7689877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 10171383 - 10171497
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccaga 103  Q
    ||||||||||||| ||||| || ||| ||||||||||| |||||||| ||||||||||||||||||||||||  || ||||||||| |||||||||| ||    
T  10171383 agattctgctgacatgatggaatgagggaccaaaagtgaaagaatctaaaattacagggacaaaatctaaatagttttttttacagggactaaaaccgga 10171482  T
Q  104 attcgctaaaattac 118  Q
    ||||||||| |||||    
T  10171483 attcgctaatattac 10171497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 26136827 - 26136709
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaac 99  Q
    ||||||||| ||||||| ||||||||||||  | ||||| |||||||||||||||||||| |||||||||||||| |||| ||||||||| |||||||||    
T  26136827 atgcagattatgctgacttgatgaaaggaggaatcaaaattggaagaatctgaaattacaaggacaaaatctaaatttttttttttacagggactaaaac 26136728  T
Q  100 cagaattcgctaaaattac 118  Q
      ||||||||||| |||||    
T  26136727 tggaattcgctaatattac 26136709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 30789649 - 30789532
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||| |||| ||||| ||||| ||| || |||||||||| |||||||||||||||| |||||||||||||| || ||||||||| |||||||| |    
T  30789649 atgcagattttgctaacgtggtgaaatgagggatcaaaagtggaggaatctgaaattacagagacaaaatctaaatcttttttttacagggactaaaatc 30789550  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  30789549 ggaattcgctaatattac 30789532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 42605895 - 42605779
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||| ||||| |||||||||| ||||||| |||||||||||||||||| |||||||||||||| ||||||| |||||| |||||||||| ||||||| |    
T  42605895 atgcatattctactgacgtgattaaaggagggaccaaaagtggaagaatatgaaattacagggataaaatct-aattttttttttacagaaactaaaatc 42605797  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||| ||| |||||    
T  42605796 ggaattcgttaatattac 42605779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14767649 - 14767530
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||||||||||||| || ||  || |||||||||||||| |||||||||||||||||||||||||||||  |||| ||||||  | ||||||||    
T  14767649 atgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatcttttttttttattgggactaaaa 14767550  T
Q  99 ccagaattcgctaaaattac 118  Q
    ||| |||||||||| |||||    
T  14767549 ccaaaattcgctaatattac 14767530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 2583462 - 2583387
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 76  Q
    |||||||||||||||||||||||||||||| || ||||||| |||||||| |||||||||||||||||||||||||    
T  2583462 atgcagattctgctgacgtgatgaaaggagggatcaaaagtagaagaatccgaaattacagggacaaaatctaaat 2583387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26532925 - 26532807
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||||||||||||| || || ||| || ||||||||||| ||| |||||||||||||||||||||||||  |||| ||||||||  ||||||||    
T  26532925 atgcagattctgctgacgtggtggaatgagggatcaaaagtggaaaaatttgaaattacagggacaaaatctaaatcttttttttttacatggactaaaa 26532826  T
Q  99 ccagaattcgctaaaatta 117  Q
    || ||||||||||| ||||    
T  26532825 ccggaattcgctaatatta 26532807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 26136921 - 26137004
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttt 84  Q
    |||||||||||||| ||||| || || ||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  26136921 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaatttttttttt 26137004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 42606020 - 42606107
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| ||| ||||||||  |||||||||||||||||||||| |||||    
T  42606020 gaccaaaagtggaagaatttgaaattacggggacaaaatctaaatctttttttttacattgactaaaaccagaattcgctaatattac 42606107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 2583556 - 2583677
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||| ||||| ||| || || |||  |||||||||||||||||||||||||| ||||||||||| ||||  |||| ||||||||| | ||||||    
T  2583556 atgcagattcggctgatgtggtggaatgaggaaccaaaagtggaagaatctgaaattatagggacaaaatttaaatcttttttttttacagggcctaaaa 2583655  T
Q  99 ccagaattcgctaaaattacga 120  Q
    | |||||||||||| |||||||    
T  2583656 ctagaattcgctaatattacga 2583677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 17623027 - 17622914
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccag 102  Q
    |||||||||||||||||| || || ||| |||||||||||||||||||| |||||||| | ||||||||||||| || ||||||||| |||||||||       
T  17623027 gcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattaca-gaacaaaatctaaatctt-tttttacagggactaaaactga 17622930  T
Q  103 aattcgctaaaattac 118  Q
    |||||||||| |||||    
T  17622929 aattcgctaatattac 17622914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 14767743 - 14767838
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaa 98  Q
    |||||||||||| ||||||||||||| ||| |||  ||| ||||||||| ||||||||||||||||||||||||  ||| ||||||||| ||||||||    
T  14767743 atgcagattctgttgacgtgatgaaaagagggacacaaactggaagaatatgaaattacagggacaaaatctaa--tttttttttacagggactaaaa 14767838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 22494526 - 22494431
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||||| |||| || |||||||| ||||||||| |||||||||||| |||||||||||   || ||||||||| ||||||||||    
T  22494526 atgcagattctgctgacgtgattaaagaag-gaccaaaaatggaagaatatgaaattacaggaacaaaatctaa---ttttttttacagggactaaaacc 22494431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 22494620 - 22494726
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||| |||||||| ||||| || || ||| |||||||||||||||||| |||||||||||||||||| ||||||| | | ||||||| || ||||||||    
T  22494620 atgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatttgaaattacagggacaaattctaaatctctttttttacgga-actaaaac 22494718  T
Q  100 cagaattc 107  Q
    ||||||||    
T  22494719 cagaattc 22494726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 7689665 - 7689548
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| ||| || ||||||||| ||| ||||||||||||||||||||||||||||| |||| |||||||||| ||| | ||||||  ||||||| |    
T  7689665 atgcagattttgccgatgtgatgaaaagagggaccaaaagtggaagaatctgaaattacaaggac-aaatctaaatctttttatttacaaggactaaagc 7689567  T
Q  100 cagaattcgctaaaattac 118  Q
    |  |||||||||| |||||    
T  7689566 cgaaattcgctaatattac 7689548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21144741 - 21144859
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttat-ttttacagagactaaaac 99  Q
    |||||||||||||||||||| | |||  || ||| |||| |||| ||||||||||||||| |||||||||||||||||| | ||||| || ||||||||     
T  21144741 atgcagattctgctgacgtggttaaataagggacgaaaaatggaggaatctgaaattacaaggacaaaatctaaattttttattttatagggactaaaat 21144840  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||| ||| |||||    
T  21144841 cggaattcgttaatattac 21144859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 42113220 - 42113335
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||| | ||||||| |||||||||||| || ||||||||||||||| |||||||| ||||||| |||||||  ||| |||||||||  |||||||||    
T  42113220 atgcagaatttgctgacatgatgaaaggagggatcaaaagtggaagaatttgaaattaaagggacataatctaa--tttttttttacaggaactaaaacc 42113317  T
Q  101 agaattcgctaaaattac 118  Q
      |||||| ||| |||||    
T  42113318 gaaattcgttaatattac 42113335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 38726793 - 38726723
Alignment:
Q  37 aaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaaccagaatt 106  Q
    |||||||||||||||||||||||| |||||||||||||| |||| |||||| || |||||||||| |||||    
T  38726793 aaagtggaagaatctgaaattacaaggacaaaatctaaacttttttttttatagggactaaaaccggaatt 38726723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 18044089 - 18044181
Alignment:
Q  25 aaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||||| || |||||| | ||||||||||||||||||||||||||| | |||| | ||||||||  |||||||||| ||||||||||| |||||    
T  18044089 aaggagggatcaaaagcgaaagaatctgaaattacagggacaaaatat-aattatttttttacatggactaaaaccggaattcgctaatattac 18044181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43851900 - 43851968
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaa 69  Q
    ||||| ||| |||||||||||||||||||| ||| ||||||||||||||||  |||||||| |||||||    
T  43851900 atgcaaattttgctgacgtgatgaaaggagggacaaaaagtggaagaatcttgaattacagagacaaaa 43851968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 44162795 - 44162687
Alignment:
Q  11 tgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaaccagaattcgc 109  Q
    ||||||| || | ||| ||| |||||||||| |||||||||||||| ||||| ||||||| |||| |||| ||||||||  ||  |||||||||||||||    
T  44162795 tgctgacatgttcaaatgagagaccaaaagtagaagaatctgaaatgacaggaacaaaatgtaaacttttttttttacaaggatcaaaaccagaattcgc 44162696  T
Q  110 taaaattac 118  Q
    ||| |||||    
T  44162695 taatattac 44162687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 40487653 - 40487768
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccag 102  Q
    |||||||||||||| ||| | ||  ||  ||| |||||||||||||||| |||| ||||||| | |||| ||| ||| ||||||||| |||||||||  |    
T  40487653 gcagattctgctgatgtgttcaattgaaggactaaaagtggaagaatctaaaatgacagggatagaatccaaactttttttttacagggactaaaactgg 40487752  T
Q  103 aattcgctaaaattac 118  Q
    |||||||||| |||||    
T  40487753 aattcgctaatattac 40487768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 35367509 - 35367440
Alignment:
Q  45 agaatctgaaattacagggacaaaatctaaatt--ttatttttacagagactaaaaccagaattcgctaa 112  Q
    |||||||||||||||||||||||||||||| ||  || ||||||||| || ||||||| |||||||||||    
T  35367509 agaatctgaaattacagggacaaaatctaattttattttttttacagggattaaaaccggaattcgctaa 35367440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 38728007 - 38728069
Alignment:
Q  37 aaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaac 99  Q
    |||||||||| ||||||||||||| ||||| ||||||| |||| |||||||||||| ||||||    
T  38728007 aaagtggaagcatctgaaattacaaggacataatctaatttttttttttacagagattaaaac 38728069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 21144697 - 21144597
Alignment:
Q  22 tgaaaggagtgaccaaaagtggaagaatctg--aaattacagggacaaaatctaaattttattt-ttacagagactaaaaccagaattcgctaaaattac 118  Q
    ||||| ||| |||||||| |||||||||||   ||||||| ||||||||||||| ||||| ||| |||||| |||||||||| |||||| |||| |||||    
T  21144697 tgaaatgagagaccaaaaatggaagaatctataaaattaccgggacaaaatctatattttttttgttacagggactaaaaccggaattctctaatattac 21144598  T
Q  119 g 119  Q
    |    
T  21144597 g 21144597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 39888589 - 39888523
Alignment:
Q  35 caaaagtggaagaatctgaaattacagggacaaaatctaaatt-ttatttttacagagactaaaacc 100  Q
    |||||| |||||||||| |||| | ||||||| |||||||||| |||||||||||| ||||||||||    
T  39888589 caaaagcggaagaatctcaaatgatagggacagaatctaaattattatttttacagggactaaaacc 39888523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 28977730 - 28977663
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatt-tttacagagactaaaa 98  Q
    |||||||||||||| ||| |||||| | ||||||| |||||||||||| || ||||||| ||||||||    
T  28977730 gaccaaaagtggaaaaatatgaaatgatagggacagaatctaaattttcttatttacagggactaaaa 28977663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 39889629 - 39889676
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatttt 79  Q
    |||||||||||||||||||||||||   ||||||| ||||||||||||    
T  39889629 gaccaaaagtggaagaatctgaaatggtagggacataatctaaatttt 39889676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 17623050 - 17623083
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggac 65  Q
    ||||||||||||| ||||||||||||||||||||    
T  17623050 gaccaaaagtggaggaatctgaaattacagggac 17623083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 17721061 - 17721011
Alignment:
Q  46 gaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||||||||| ||||||||||||    |||||||||||| ||||||||||    
T  17721061 gaatctgaaattacaaggacaaaatcta----ttatttttacagggactaaaacc 17721011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 20875803 - 20875740
Alignment:
Q  36 aaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||||||||||||||| | ||||||| |||| ||| ||| ||||||||  ||||||||||    
T  20875803 aaaagtggaagaatctgaaataatagggacataatccaaacttt-tttttacaaggactaaaacc 20875740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 8e-42; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 7126153 - 7126271
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  7126153 atgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaaagactaaaac 7126252  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  7126253 cggaattcgctaatattac 7126271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 6817357 - 6817476
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaac 99  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||     
T  6817357 atgcatattctgctgatgtgatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatctaaatttttttttttacagagactaaaat 6817456  T
Q  100 cagaattcgctaaaattacg 119  Q
     | |||||||||| ||||||    
T  6817457 taaaattcgctaatattacg 6817476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 23979137 - 23979255
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||| ||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  23979137 atgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaac 23979236  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  23979237 cggaattcgctaatattac 23979255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24074445 - 24074327
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||| ||||||||| |||||||||    
T  24074445 atgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatatttttttttacagggactaaaac 24074346  T
Q  100 cagaattcgctaaaattac 118  Q
    |  |||||||||| |||||    
T  24074345 cgaaattcgctaatattac 24074327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14144043 - 14143926
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||||| |||||||||||||| |||  ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  14144043 atgcagattctactgacgtgatgaaatgaggtaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaacc 14143944  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  14143943 ggaattcgctaatattac 14143926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 17762424 - 17762307
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||| ||||||||||    
T  17762424 atgcagattctgcttacgtgattaaaggagggaccaaaagtggaagaatctgaaattacaggaacaaaatataaatcttttttttacagggactaaaacc 17762325  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  17762324 ggaattcgctaatattac 17762307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 6817264 - 6817147
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| ||||| ||||||||| || ||||||||| ||||||||||    
T  6817264 atgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacatggacataatctaaatcttttttttacagggactaaaacc 6817165  T
Q  101 agaattcgctaaaattac 118  Q
     |||||| |||| |||||    
T  6817164 ggaattcactaatattac 6817147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14411839 - 14411721
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||| ||||| ||| ||| ||||| |||||||||    
T  14411839 atgcaaattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacatagacaaaatataaatctttttttatacagggactaaaac 14411740  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  14411739 cggaattcgctaatattac 14411721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 41001596 - 41001706
Alignment:
Q  8 ttctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattc 107  Q
    ||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||  |||||||||| ||||||    
T  41001596 ttctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatcttttttttacaaggactaaaaccggaattc 41001695  T
Q  108 gctaaaattac 118  Q
    ||||| |||||    
T  41001696 gctaatattac 41001706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 4919226 - 4919366
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||| |||||| |||| |||||||||||| || ||||||| |||||||||||||||||||||||||||||||| |||| |||||||||  |||||||||    
T  4919226 atgcatattctgttgacttgatgaaaggagggatcaaaagtagaagaatctgaaattacagggacaaaatctaatttttttttttacaggaactaaaacc 4919325  T
Q  101 agaattcgctaaaatt------acgaaaagaggtatttacc 135  Q
     ||||||||||| |||      |||||||||||||||||||    
T  4919326 ggaattcgctaatattccagagacgaaaagaggtatttacc 4919366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 7126059 - 7125942
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||| || ||  || ||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||| |||||||| |    
T  7126059 atgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatcttttttttacagggactaaaatc 7125960  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  7125959 ggaattcgctaatattac 7125942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31799876 - 31799992
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||| |||||||||||||||||||||||| || |||||| ||||||||||||||||||| ||||||||||||||| ||| ||||||||| |||||||||    
T  31799876 atgcaaattctgctgacgtgatgaaaggagggatcaaaagaggaagaatctgaaattacatggacaaaatctaaatctttttttttacag-gactaaaac 31799974  T
Q  100 cagaattcgctaaaatta 117  Q
    | ||||||||||| ||||    
T  31799975 cggaattcgctaatatta 31799992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18336610 - 18336492
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    ||||| |||||||||| ||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||  |||| ||||||||| ||||||||    
T  18336610 atgcaaattctgctgatgtgatgaaaggagggatcaaaagcggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaa 18336511  T
Q  99 ccagaattcgctaaaatta 117  Q
     | ||||||||||| ||||    
T  18336510 tcggaattcgctaatatta 18336492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 24650935 - 24651053
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaatttt-atttttacagagactaaaac 99  Q
    |||| ||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||| |||||||| |||||  ||||||||  |||||||||    
T  24650935 atgcggattctgctgacgtgatgaaaggagggatcaaaagtggaagaatctaaaattacagggataaaatctagattttcttttttacatggactaaaac 24651034  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  24651035 cggaattcgctaatattac 24651053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 24837405 - 24837523
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||| |||| |||||||||||| || ||||||| ||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  24837405 atgcagattctgttgacttgatgaaaggagggagcaaaagtagaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaac 24837504  T
Q  100 cagaattcgctaaaattac 118  Q
      ||||||||||| |||||    
T  24837505 tggaattcgctaatattac 24837523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 27159193 - 27159308
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||||||||||||||||||||| || |||||||| ||||||||| | ||||||||||||||||||||||||||  ||||||||  ||||||||||    
T  27159193 atgcagattctgctgacgtgatgaaagaagggaccaaaaatggaagaatataaaattacagggacaaaatctaaattt--tttttacaaggactaaaacc 27159290  T
Q  101 agaattcgctaaaattac 118  Q
      |||||||||| |||||    
T  27159291 gaaattcgctaatattac 27159308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 29444948 - 29444830
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||| ||||| |||||||||  || ||||||||| ||||||||     
T  29444948 atgcagattctgctgacgtgatgaaaggagggaccaaaagtagaagaatatgaaattacaaggacataatctaaatccttttttttacagggactaaaat 29444849  T
Q  100 cagaattcgctaaaattac 118  Q
    ||||||||| ||| |||||    
T  29444848 cagaattcgttaatattac 29444830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20709448 - 20709565
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||| |||||||||| ||||||||||||  ||| |||||||||||||| |||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  20709448 atgcatattctgctgatgtgatgaaaggaaggacaaaaagtggaagaatatgaaattacatggacaaaatctaaatcttttttttacagggactaaaacc 20709547  T
Q  101 agaattcgctaaaattac 118  Q
    | |||||| ||| |||||    
T  20709548 aaaattcgttaatattac 20709565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 25779163 - 25779228
Alignment:
Q  155 taatttctttaagactagagtttttcatgaagacacatacacacaaacatgtaggtaagaaattat 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25779163 taatttctttaagactagagtttttcatgaagacacatacacacaaacatgtaggtaagaaattat 25779228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 17762518 - 17762630
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||| |||||||| ||||| || || ||| |||||||||||||||||||||||||||  |||||||||||||||| ||| ||||||||| |||||||||    
T  17762518 atgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattatggggacaaaatctaaatctttttttttacagggactaaaac 17762617  T
Q  100 cagaattcgctaa 112  Q
    |||||||||||||    
T  17762618 cagaattcgctaa 17762630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 30512429 - 30512312
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| ||||| || || ||| |||||||||||||| ||||||||||||||||||| ||||||||||  | ||||||||| ||||||||||    
T  30512429 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatcctttttttacagggactaaaacc 30512330  T
Q  101 agaattcgctaaaattac 118  Q
    | ||||| |||| |||||    
T  30512329 aaaattcactaatattac 30512312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 30552769 - 30552652
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| ||||| || || ||| |||||||||||||| ||||||||||||||||||| ||||||||||  | ||||||||| ||||||||||    
T  30552769 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatcctttttttacagggactaaaacc 30552670  T
Q  101 agaattcgctaaaattac 118  Q
    | ||||| |||| |||||    
T  30552669 aaaattcactaatattac 30552652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 14411906 - 14412018
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaa 104  Q
    |||||||||| ||||| || || ||| ||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||  ||    
T  14411906 agattctgcttacgtggtggaatgagggaccaaacgtggaagaatctgaaattacaaggacaaaatctaaattttttttttacagggactaaaaccgaaa 14412005  T
Q  105 ttcgctaaaatta 117  Q
    |||| ||| ||||    
T  14412006 ttcgttaatatta 14412018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 24837308 - 24837200
Alignment:
Q  4 cagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccag 102  Q
    ||||||||||| ||||| || || ||| |||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||| |||||||||| |    
T  24837308 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaaaccgg 24837209  T
Q  103 aattcgcta 111  Q
    |||||||||    
T  24837208 aattcgcta 24837200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 31799776 - 31799641
Alignment:
Q  7 attctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaat 105  Q
    |||||||| ||||| || ||  || ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||| ||||| ||||    
T  31799776 attctgcttacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactgaaaccggaat 31799677  T
Q  106 tcgctaaaatt------acgaaaagaggtatttacc 135  Q
    ||||||| |||      |||||||||||||||||||    
T  31799676 tcgctaatattatagggacgaaaagaggtatttacc 31799641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 24074538 - 24074649
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||| | |||  || |||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||| || ||||||    
T  24074538 atgcagattctgctgacgtggttaaataagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggattaaaac 24074637  T
Q  100 cagaattcgcta 111  Q
    | ||||||||||    
T  24074638 cggaattcgcta 24074649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 993889 - 993774
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| ||||| || || ||| |||||||||||||||||| |||||||||| |||| ||||||||  ||| ||||||||| ||||||||||    
T  993889 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggactaaatctaa--tttttttttacagggactaaaacc 993792  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  993791 ggaattcgctaatattac 993774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 14144137 - 14144255
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||| ||||||| || ||  || |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||     
T  14144137 atgcagattctggtgacgtggtggaataagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaat 14144236  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||| ||| |||||    
T  14144237 cggaattcgttaatattac 14144255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 18336726 - 18336804
Alignment:
Q  35 caaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||| |||||||||||    
T  18336726 caaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaa 18336804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 4919132 - 4918981
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    ||||| |||||||| ||||| || || ||| |||||||||||||||||| |||||||||||||||||||||||||  |||| |||||||||  |||||||    
T  4919132 atgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaaa 4919033  T
Q  99 ccagaattcgctaaaattac------gaaaagaggtatttacctaagtttat 144  Q
    ||  |||||||||| |||||      |||||||||||||||||  |||||||    
T  4919032 ccgaaattcgctaatattacagagatgaaaagaggtatttaccctagtttat 4918981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20709354 - 20709235
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa---ttttatttttacagagactaaa 97  Q
    |||||||||||||||||||| ||||| ||| |||||||||||||||||| |||||||||||||||| ||||||||   |||| |||| |||  |||||||    
T  20709354 atgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggacagaatctaaatcttttttttttcacatggactaaa 20709255  T
Q  98 accagaattcgctaaaatta 117  Q
    ||| |||||| |||| ||||    
T  20709254 accggaattcactaatatta 20709235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 993985 - 994093
Alignment:
Q  4 cagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccag 102  Q
    ||||||||| |||| |||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||  || ||||| ||||||||||      
T  993985 cagattctgttgacatgataaaaggagggaccaaaagtggaagaatctgcaattacagggacaaaatctaaatcttttattctacagggactaaaaccga 994084  T
Q  103 aattcgcta 111  Q
    |||||||||    
T  994085 aattcgcta 994093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 41001495 - 41001380
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| || || || || ||  |||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||||| ||||||||||    
T  41001495 atgcagattctgcttacatggtggaatgaaggaccaaaagtggaagaatatgaaattacagggacaaaatctaa--tttttttttacagggactaaaacc 41001398  T
Q  101 agaattcgctaaaattac 118  Q
      |||||||||| |||||    
T  41001397 gaaattcgctaatattac 41001380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 27159128 - 27159015
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaa 104  Q
    ||||| |||||||||| || ||  || ||||||||||||||||||||||||||||||||||||||| ||||| || |||| || |||||||||||   ||    
T  27159128 agattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatttaaatctttttttaactgagactaaaactgaaa 27159029  T
Q  105 ttcgctaaaattac 118  Q
    |||||||| |||||    
T  27159028 ttcgctaatattac 27159015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 29445073 - 29445159
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| |||||||||  ||||||||||| |||||    
T  29445073 gaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctttttttttacag-gactaaaactggaattcgctaatattac 29445159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 22571206 - 22571101
Alignment:
Q  14 tgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaaccagaattcgctaa 112  Q
    ||||||| ||||| ||| |||||||||||||||||| ||||||||||| || | |||||||| |||| ||||||||| |||||||| | |||||||||||    
T  22571206 tgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacagagatataatctaaatttttttttttacagggactaaaatcggaattcgctaa 22571107  T
Q  113 aattac 118  Q
     |||||    
T  22571106 tattac 22571101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24650842 - 24650726
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||| |||||||||| || || |||  ||||||||||||||||| |||||||||||| ||||||||||||| || |||||||| ||| |||||||    
T  24650842 atgcagattttgctgacgtggtggaatgagctaccaaaagtggaagaatatgaaattacaggaacaaaatctaaatctt-tttttacatagattaaaacc 24650744  T
Q  101 agaattcgctaaaattac 118  Q
      |||||| ||| |||||    
T  24650743 gaaattcgttaatattac 24650726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 20959330 - 20959437
Alignment:
Q  4 cagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccaga 103  Q
    ||||||||||| || || | ||| ||  ||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||  | ||||||||||  |    
T  20959330 cagattctgctaacatggttaaatgaacgaccaaaagtggaggaatctgaaattgcagggacaaaatctaaatttt-tttttatggtgactaaaaccgaa 20959428  T
Q  104 attcgctaa 112  Q
    |||||||||    
T  20959429 attcgctaa 20959437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 41424655 - 41424546
Alignment:
Q  4 cagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaaccag 102  Q
    |||||| ||||||| || | ||| ||| ||| ||||||||||||||||||||| ||||||||| |||||||| |||| ||||||||  |||  ||||| |    
T  41424655 cagattttgctgacatgtttaaatgagggactaaaagtggaagaatctgaaatgacagggacagaatctaaacttttttttttacaaggacctaaaccgg 41424556  T
Q  103 aattcgctaa 112  Q
    ||||||||||    
T  41424555 aattcgctaa 41424546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 28070570 - 28070501
Alignment:
Q  37 aaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattc 107  Q
    |||||||||||||||||||||||| ||||| ||||||||  || ||||||||| ||||||||| |||||||    
T  28070570 aaagtggaagaatctgaaattacaaggacagaatctaaacctt-tttttacagggactaaaactagaattc 28070501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 37281857 - 37281965
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||||| ||| ||| |||||||| |   | ||||||||||||| | |||| |||||||  ||| |||||| ||| |||||||||    
T  37281857 atgcagattctgctgacgtgattaaatgagagaccaaaaataacataatctgaaattacggagacataatctaa--tttgtttttataga-actaaaacc 37281953  T
Q  101 agaattcgctaa 112  Q
    | ||||||||||    
T  37281954 aaaattcgctaa 37281965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22571313 - 22571431
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttt-tacagagactaaaac 99  Q
    ||||||||| || ||||||| ||||| ||| || |||||   ||||||| |||||||||| | ||||||||||| |||| |||| || | ||||||||||    
T  22571313 atgcagattttgttgacgtggtgaaatgagggagcaaaacgagaagaatttgaaattacatgaacaaaatctaattttttttttatataaagactaaaac 22571412  T
Q  100 cagaattcgctaaaattac 118  Q
    |  |||||||||| |||||    
T  22571413 cgaaattcgctaatattac 22571431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 32234010 - 32233967
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 75  Q
    |||||||||||||||||||| |||| | ||||||||||||||||    
T  32234010 gaccaaaagtggaagaatctcaaatgatagggacaaaatctaaa 32233967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 20947059 - 20947097
Alignment:
Q  22 tgaaaggagtgaccaaaagtggaagaatctgaaattaca 60  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  20947059 tgaaatgagtgaccaaaagtggaggaatctgaaattaca 20947097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 28071735 - 28071817
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttattttt 85  Q
    |||||||||||||||  | | ||  ||| |||| |||||||||||||||||||||||| ||| | ||||||| |||| |||||    
T  28071735 gcagattctgctgactggtttaagtgagggacctaaagtggaagaatctgaaattacaaggatataatctaattttttttttt 28071817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 18336671 - 18336638
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggac 65  Q
    ||||||||||||| ||||||||||||||||||||    
T  18336671 gaccaaaagtggaggaatctgaaattacagggac 18336638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 41425727 - 41425798
Alignment:
Q  41 tggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaaccagaattcgct 110  Q
    |||||||||||||||| ||||||| | ||||||||  |||| ||||||||  ||| |||| |||||||||||    
T  41425727 tggaagaatctgaaatgacagggatagaatctaaactttttttttttacaaggaccaaaatcagaattcgct 41425798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 5e-40; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 39711214 - 39711075
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  39711214 atgcagattctgctgacgtgattaaaggagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttttttttacagggactaaaacc 39711115  T
Q  101 agaattcgctaaaatt-----acgaaaagaggtatttacc 135  Q
     ||||||||||| |||     |||||||||||||||||||    
T  39711114 ggaattcgctaatattacaagacgaaaagaggtatttacc 39711075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 24467863 - 24468001
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||||| |||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  24467863 atgcagattctactgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaac 24467962  T
Q  100 cagaattcgctaaaattac---gaaaagaggtatttacc 135  Q
    | |||||| |||| |||||   |||||||||||||||||    
T  24467963 cggaattcactaatattacatggaaaagaggtatttacc 24468001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4907198 - 4907316
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||| |||||||||    
T  4907198 atgcagattctactgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttacagggactaaaac 4907297  T
Q  100 cagaattcgctaaaattac 118  Q
      ||||||||||| |||||    
T  4907298 tggaattcgctaatattac 4907316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 18462427 - 18462310
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||  |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  18462427 atgcagattctaatgacttgatgaaaggagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaacc 18462328  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  18462327 ggaattcgctaatattac 18462310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 29696706 - 29696589
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||||||| || ||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  29696706 atgcagattctgccgatgtgatgaaaggagtgacaaaaagtggaagaatatgaaattacggggacaaaatctaaatcttttttttacagagactaaaacc 29696607  T
Q  101 agaattcgctaaaattac 118  Q
      |||||||||| |||||    
T  29696606 gaaattcgctaatattac 29696589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 33628930 - 33629044
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaa-attttatttttacagagactaaaaccaga 103  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||| |||||||||| ||    
T  33628930 agattctgctgacgtgattaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatcaaattttttttttttacagggactaaaaccgga 33629029  T
Q  104 attcgctaaaattac 118  Q
    ||||||||| |||||    
T  33629030 attcgctaatattac 33629044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24467770 - 24467653
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||  |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||      
T  24467770 atgcagattctaatgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaatt 24467671  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  24467670 ggaattcgctaatattac 24467653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 29696794 - 29696911
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| ||||| || || ||| ||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||    
T  29696794 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacatggacaaaatctaatttttttttttacagtgactaaaacc 29696893  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  29696894 ggaattcgctaatattac 29696911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 42510156 - 42510039
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||| ||| ||||| ||| ||| |||||||||||||| ||||||||||||||||||||||||||| | ||||||||| || |||||||    
T  42510156 atgcagattctgctgatgtggtgaaatgagggactaaaagtggaagaatatgaaattacagggacaaaatctaaattatttttttacagggattaaaacc 42510057  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  42510056 ggaattcgctaatattac 42510039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 34749341 - 34749459
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||  ||||||||     
T  34749341 atgcagattctgctgacgtgattaaaggaggtaccaaaagtggaagaatctgaaattacagggataaaatctaaatctttttttttacaaggactaaaat 34749440  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||| ||| |||||    
T  34749441 cggaattcgataatattac 34749459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 39711308 - 39711426
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||| |||||||| ||||| || || ||| |||||||||||||||||| ||||||||| |||||||||||||||| ||| ||||||||| |||||||||    
T  39711308 atgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatctttttttttacagggactaaaac 39711407  T
Q  100 cagaattcgctaaaattac 118  Q
    ||||||||||||| |||||    
T  39711408 cagaattcgctaatattac 39711426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 48072103 - 48071985
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||| |||||||||| ||||||||||||| || ||||||||||| ||| |||||||||||||||||||||||||| ||| || ||||||  ||||||||    
T  48072103 atgcatattctgctgatgtgatgaaaggagggagcaaaagtggaataatatgaaattacagggacaaaatctaaatcttttttattacaggaactaaaac 48072004  T
Q  100 cagaattcgctaaaattac 118  Q
    ||||||||||||| |||||    
T  48072003 cagaattcgctaatattac 48071985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 52058153 - 52058035
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||| | ||||||| ||| |||||||||| ||||||||    
T  52058153 atgcagattctgctgatgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacatagtctaaatctttttttttacagaaactaaaac 52058054  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||| ||| |||||    
T  52058053 cggaattcgttaatattac 52058035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 52058256 - 52058362
Alignment:
Q  13 ctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgcta 111  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| |||||  |||||||||| |||||||||    
T  52058256 ctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatctaaatctttttttctacaggaactaaaaccaaaattcgcta 52058355  T
Q  112 aaattac 118  Q
    | |||||    
T  52058356 atattac 52058362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 39826286 - 39826400
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| |||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| |||||||||    
T  39826286 atgcagattttgctgacgtgatgaaagga----ccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaac 39826381  T
Q  100 cagaattcgctaaaattac 118  Q
    |  |||||||||| |||||    
T  39826382 cgaaattcgctaatattac 39826400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 8292946 - 8292834
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||| |||||||||||||||||| |||  |||||||| |||||||||    
T  8292946 atgcagattctgctgacgtgatgaaaagaggaaccaaaagtggaagaatatgaaatttcagggacaaaatctaaatcttttattttacagggactaaaac 8292847  T
Q  100 cagaattcgctaa 112  Q
    | | |||||||||    
T  8292846 cgggattcgctaa 8292834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 39970881 - 39971000
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||| |||||||||||||||||||||| || ||||||||||||||| |||| |||||||||||||||||||||||  |||| ||||||||| ||||||||    
T  39970881 atgcggattctgctgacgtgatgaaagaagggaccaaaagtggaaggatctaaaattacagggacaaaatctaaatcttttttttttacagggactaaaa 39970980  T
Q  99 ccagaattcgctaaaattac 118  Q
    ||  |||||| ||| |||||    
T  39970981 ccgaaattcgttaatattac 39971000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 17606447 - 17606328
Alignment:
Q  4 cagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-----ttttatttttacagagactaaaa 98  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||| ||||||||||||     |||| ||||||||| ||||||||    
T  17606447 cagattctgctgacgtgatgaaatgagggaccaaaagtggaagaatatgaaattacaggaacaaaatctaaatctttttttttttttacagggactaaaa 17606348  T
Q  99 ccagaattcgctaaaattac 118  Q
     | ||||||||||| |||||    
T  17606347 tcggaattcgctaatattac 17606328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4907104 - 4906986
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||| ||||||||| || || ||| |||||||||||||||||| ||||||||||||||||||||||||||  || ||||||||| |||||||||    
T  4907104 atgcagattcggctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcattttttttacagggactaaaac 4907005  T
Q  100 cagaattcgctaaaattac 118  Q
     ||||||| |||| |||||    
T  4907004 tagaattcactaatattac 4906986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 39826192 - 39826051
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||| ||||| || || ||| || |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||     
T  39826192 atgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaat 39826093  T
Q  100 cagaattcgctaaaatt------acgaaaagaggtatttacc 135  Q
    |  |||||||||| |||      |||||||||||||||||||    
T  39826092 cgaaattcgctaatattatatggacgaaaagaggtatttacc 39826051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 17606544 - 17606660
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||| ||| |||||||||| || ||  || ||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  17606544 atgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctt-tttttacagggactaaaacc 17606642  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  17606643 ggaattcgctaatattac 17606660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20995904 - 20996021
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||| || ||  || |||||||||||||||||| ||||||||||| |||||||||||||| || ||||||||  |||||||||     
T  20995904 atgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatcttttttttacatggactaaaact 20996003  T
Q  101 agaattcgctaaaattac 118  Q
    | |||||||||| |||||    
T  20996004 aaaattcgctaatattac 20996021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 34749279 - 34749162
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||| |||||||| ||||| || || ||| |||||||||||||||||| ||||||||| |||||||||||||||| || |||||| || |||||||| |    
T  34749279 atgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatcttttttttatagggactaaaatc 34749180  T
Q  101 agaattcgctaaaattac 118  Q
    |||||||||||| |||||    
T  34749179 agaattcgctaatattac 34749162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 8293043 - 8293185
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||| |||||| || || || ||| |||||||||||||||||| |||||||||||||||||||||||||  |||| ||||||||| ||||||||    
T  8293043 atgcagattcggctgacatggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaaa 8293142  T
Q  99 ccagaattcgctaaaatt------acgaaaagaggtatttacc 135  Q
    | |||||||| ||| |||      |||||||||||||||||||    
T  8293143 ctagaattcgttaatattatagggacgaaaagaggtatttacc 8293185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 43539489 - 43539377
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||| | ||||||||||||||||||||||||  || ||||||||  ||||||||     
T  43539489 atgcagattctgctgacgtgatgaaaggagggaccaaaagtggaacaatataaaattacagggacaaaatctaaatcgttttttttacaaggactaaaat 43539390  T
Q  100 cagaattcgctaa 112  Q
    | ||||| |||||    
T  43539389 cggaatttgctaa 43539377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 18462520 - 18462638
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||| ||||||| ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||| ||| ||| ||||   ||||||||    
T  18462520 atgcagattctgttgacgtggtgaaatgagagaccaaaagtggaagaatctgaaattacggggacaaaatctaaatctttttttatacaagaactaaaac 18462619  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||| ||||| |||||    
T  18462620 cggaatttgctaatattac 18462638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 30299369 - 30299276
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaa 98  Q
    |||||||| |||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||    
T  30299369 agattctgttgacttgatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacag-gactaaaa 30299276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 33628832 - 33628714
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||| |||||||| | ||| || || ||| ||||||||||| |||||||||||||||| |||||||||||||||| ||| ||||||| | |||||||||    
T  33628832 atgcaaattctgcttatgtggtggaatgagggaccaaaagtgaaagaatctgaaattacggggacaaaatctaaatctttttttttacggggactaaaac 33628733  T
Q  100 cagaattcgctaaaattac 118  Q
    ||||||||||||| |||||    
T  33628732 cagaattcgctaatattac 33628714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 48072197 - 48072315
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||| ||||| |||   |||||||||||||||| |||||||||||||||| ||||||||| ||| ||||||||  |||||||||    
T  48072197 atgcagattctgctgacgtggtgaaatgaggacccaaaagtggaagaatatgaaattacagggacataatctaaatatttttttttacaaggactaaaac 48072296  T
Q  100 cagaattcgctaaaattac 118  Q
    | |||||| |||| |||||    
T  48072297 cggaattcactaatattac 48072315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 17501967 - 17502083
Alignment:
Q  2 tgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacca 101  Q
    ||||||||||||||||  | | ||| ||| ||| ||||||||| ||||||||||||||||||||| |||||||| ||| |||||| || ||||||||||     
T  17501967 tgcagattctgctgacagggttaaacgagggactaaaagtggaggaatctgaaattacagggacagaatctaaactttttttttatagggactaaaaccg 17502066  T
Q  102 gaattcgctaaaattac 118  Q
    ||||||||||| |||||    
T  17502067 gaattcgctaatattac 17502083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 30252168 - 30252251
Alignment:
Q  35 caaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaaaatta 117  Q
    ||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  30252168 caaaaatggaagaatatgaaattacggggacaaaatctaaatctttatttttacagggactaaaaccagaattcgctaatatta 30252251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 30299467 - 30299585
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||||| || ||||| || || ||| |||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||  ||||||||    
T  30299467 atgcagattcttcttacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatctttttttttacaggaactaaaac 30299566  T
Q  100 cagaattcgctaaaattac 118  Q
    |  |||| ||||| |||||    
T  30299567 cgaaatttgctaatattac 30299585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 39970788 - 39970689
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    ||||||||| |||||||||| || || ||| |||||||||||||||||||||||||||||  |||||||||||||  |||| |||||||||||| |||||    
T  39970788 atgcagattttgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacatagacaaaatctaaatcttttttttttacagagattaaaa 39970689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 42510250 - 42510369
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||||||||||||||||||| ||| ||  | ||||||||||||||||||||| ||||  | ||||||||  |||| ||||||||  ||||||||    
T  42510250 atgcagattctgctgacgtgatgaaatgagggaatacaagtggaagaatctgaaattataggggtagaatctaaattttttttttttacaaggactaaaa 42510349  T
Q  99 ccagaattcgctaaaattac 118  Q
    || ||||||||||| |||||    
T  42510350 ccggaattcgctaatattac 42510369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20995811 - 20995747
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggac 65  Q
    ||||||||||||||||||||||||||| || ||||||||||| |||||| | |||||||||||||    
T  20995811 atgcagattctgctgacgtgatgaaagaagggaccaaaagtgaaagaatataaaattacagggac 20995747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 13229874 - 13229803
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatct 72  Q
    ||||||||| || |||| ||||||||||||||| ||||||||||||||| |||||||||| | |||||||||    
T  13229874 atgcagattatgttgacttgatgaaaggagtgatcaaaagtggaagaatatgaaattacaagcacaaaatct 13229803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 13229967 - 13230109
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaa-attttatttttac-agagactaaaa 98  Q
    |||||||||||||| ||||| || || ||| |||||||||||||||||  |||||||| || | ||||||||||  |||| ||||||| |||||||||||    
T  13229967 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaagatgaaattaaagaggcaaaatctaattttttttttttacaagagactaaaa 13230066  T
Q  99 ccagaattcgctaaaatt------acgaaaagaggtatttacc 135  Q
    ||  |||||||||| |||      |||||||||||||||||||    
T  13230067 ccgaaattcgctaatatttcagagacgaaaagaggtatttacc 13230109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 18342261 - 18342371
Alignment:
Q  7 attctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaatt 106  Q
    |||||||| ||||| || || ||| ||| |||||||||||||| |||||||||| | | ||||| |||||||| ||||||||| ||||||||||  ||||    
T  18342261 attctgcttacgtggtggaatgagggactaaaagtggaagaatatgaaattacaagaataaaatttaaatttt-tttttacagggactaaaaccgaaatt 18342359  T
Q  107 cgctaaaattac 118  Q
    |||||| |||||    
T  18342360 cgctaatattac 18342371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 16294187 - 16294281
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttat-ttttacagagactaaaa 98  Q
    ||||||||||||| || | |||  || ||||||||||||| |||| |||||||||| |||||||||||||||||| | |||||||| ||||||||    
T  16294187 agattctgctgacatggttaaataagggaccaaaagtggaggaatatgaaattacaaggacaaaatctaaattttttattttacagggactaaaa 16294281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7473934 - 7473862
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatcta 73  Q
    |||||||||||  ||||||| ||||| ||| |||||||||||||||||| ||||||||||| |||| ||||||    
T  7473934 atgcagattcttttgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacagagacataatcta 7473862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 17500909 - 17500793
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaacca 101  Q
    |||||||||||||||  | | ||  ||| |||||||||||||| ||||| |||| | |||||   |||||||| |||| ||||||||||||||||||||     
T  17500909 gcagattctgctgacaagtttaagtgagggaccaaaagtggaataatctcaaatgatagggatggaatctaaacttttttttttacagagactaaaaccg 17500810  T
Q  102 gaattcgctaaaattac 118  Q
    ||||||||||| |||||    
T  17500809 gaattcgctaatattac 17500793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 27039748 - 27039670
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgct 110  Q
    |||||| ||||||||||||| | |||  |||||||||||||||| ||| ||||||||  ||| |||||| |||||||||    
T  27039748 gaccaatagtggaagaatcttatattgtagggacaaaatctaaactttttttttacaaggaccaaaaccggaattcgct 27039670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 79
Target Start/End: Original strand, 215191 - 215226
Alignment:
Q  44 aagaatctgaaattacagggacaaaatctaaatttt 79  Q
    ||||||||||||||||| ||||||||||||||||||    
T  215191 aagaatctgaaattacaaggacaaaatctaaatttt 215226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 26266518 - 26266439
Alignment:
Q  40 gtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||||||||||| |||| | ||||||| ||||||||| ||| ||||||||||||| ||||||  | |||||||| |||||    
T  26266518 gtggaagaatctcaaatgatagggacagaatctaaatatttttttttacagagacaaaaaccgaatttcgctaatattac 26266439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 42510167 - 42510210
Alignment:
Q  22 tgaaaggagtgaccaaaagtggaagaatctgaaattacagggac 65  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||||    
T  42510167 tgaaatgagggaccaaaagtggaggaatctgaaattacagggac 42510210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 34749300 - 34749332
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacaggga 64  Q
    ||||||||||||| |||||||||||||||||||    
T  34749300 gaccaaaagtggaggaatctgaaattacaggga 34749332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 37236822 - 37236750
Alignment:
Q  39 agtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaaccagaattcgct 110  Q
    ||||||||||||||||||    |||||| |||||||| |||| |||||| || |||||||||| |||||||||    
T  37236822 agtggaagaatctgaaatgttggggacagaatctaaacttttctttttatagggactaaaaccggaattcgct 37236750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 43400857 - 43400785
Alignment:
Q  39 agtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaaccagaattcgct 110  Q
    ||||||||||||| | |||  ||||||| |||||||| |||| ||||||||| ||| |||||| |||||||||    
T  43400857 agtggaagaatcttatattgtagggacagaatctaaacttttttttttacagggaccaaaaccggaattcgct 43400785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 48072176 - 48072144
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacaggga 64  Q
    ||||||||||||| |||||||||||||||||||    
T  48072176 gaccaaaagtggaggaatctgaaattacaggga 48072144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 12218 - 12336
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| || |||||||||    
T  12218 atgcagattctgctgacgtgatgaaaggatggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaac 12317  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  12318 cggaattcgctaatattac 12336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 41600194 - 41600312
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| |||||||||    
T  41600194 atgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaac 41600293  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  41600294 cggaattcgctaatattac 41600312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 12006776 - 12006894
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| ||||||||     
T  12006776 atgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaat 12006875  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  12006876 cggaattcgctaatattac 12006894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 28218399 - 28218517
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| |||||||||    
T  28218399 atgcagattttgttgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaac 28218498  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  28218499 cggaattcgctaatattac 28218517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 6465996 - 6465879
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||||||| || ||||||||| ||||||||||    
T  6465996 atgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacaagaacataatctaaatattttttttacagggactaaaacc 6465897  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  6465896 ggaattcgctaatattac 6465879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20963731 - 20963847
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||| ||| || ||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  20963731 atgcaaattatgttgacgtgatgaaaggag-gaccaaaagtgaaagaatctgaaattacagggactaaatctaaattttatttttacagggactaaaacc 20963829  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  20963830 ggaattcgctaatattac 20963847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 28218321 - 28218202
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||||||||||||| || || ||| ||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| ||||||||    
T  28218321 atgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaa 28218222  T
Q  99 ccagaattcgctaaaattac 118  Q
    || ||||||||||| |||||    
T  28218221 ccggaattcgctaatattac 28218202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 23704803 - 23704686
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||  |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| || |||||||    
T  23704803 atgcagattctattgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatgtaaatcttttttttacagtgagtaaaacc 23704704  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  23704703 ggaattcgctaatattac 23704686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 23704897 - 23705014
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| ||||| || || ||| |||||||||||||||||| |||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  23704897 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaacc 23704996  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  23704997 ggaattcgctaatattac 23705014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 7658205 - 7658319
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||   |||| ||||||||||||||||||||    
T  7658205 atgcagattttgctgacgtgatgaaaggagagaccaaaagtggaagaatcttaaattacagggacaaaatct---ttttttttttacagagactaaaacc 7658301  T
Q  101 agaattcgctaaaattac 118  Q
      |||||| ||| |||||    
T  7658302 gaaattcgttaatattac 7658319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 1250442 - 1250560
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||| |||   |||||||||||||||||    
T  1250442 atgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattaaagggacaaaatctaaatcttttagtttacagagactaaaac 1250541  T
Q  100 cagaattcgctaaaattac 118  Q
      ||||||||||| |||||    
T  1250542 tggaattcgctaatattac 1250560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 38879960 - 38880075
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||| |||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||||||    
T  38879960 atgcagattctgttgacttggtgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatttttttttt--aaagactaaaacc 38880057  T
Q  101 agaattcgctaaaattac 118  Q
     ||||| ||||| |||||    
T  38880058 ggaatttgctaatattac 38880075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 48672515 - 48672633
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||||| |||||||||    
T  48672515 atgcagattttgctaacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggataaaatctaaatctttttatttacagggactaaaac 48672614  T
Q  100 cagaattcgctaaaattac 118  Q
    |  |||||||||| |||||    
T  48672615 cgaaattcgctaatattac 48672633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 12006682 - 12006565
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| ||||| || || ||| || |||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| |    
T  12006682 atgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaatttttttttttacagggactaaaatc 12006583  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  12006582 ggaattcgctaatattac 12006565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 16995341 - 16995224
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||| || || | | ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||  |||||||||    
T  16995341 atgcagattctgctgacgtggtggaatgtgggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatattttttttacaggaactaaaacc 16995242  T
Q  101 agaattcgctaaaattac 118  Q
      |||||||||| |||||    
T  16995241 gaaattcgctaatattac 16995224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20458833 - 20458716
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| ||||| || || ||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||| ||||||||||    
T  20458833 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagcgacaaaatctaaattttttatttacagggactaaaacc 20458734  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||| ||| |||||    
T  20458733 ggaattcgttaatattac 20458716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25772567 - 25772684
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  25772567 atgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaac 25772666  T
Q  100 cagaattcgctaaaatta 117  Q
      |||||| |||| ||||    
T  25772667 tggaattcactaatatta 25772684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 20419678 - 20419537
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||| ||||| || || ||| |||||||| ||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  20419678 atgcagattctgcttacgtggtggaatgagggaccaaaaatggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaac 20419579  T
Q  100 cagaattcgctaaaatt------acgaaaagaggtatttacc 135  Q
    | ||||||||||| |||      |||||||||||||||||||    
T  20419578 cggaattcgctaatattatagggacgaaaagaggtatttacc 20419537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 23383736 - 23383854
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||| |||| |||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| ||| ||||| ||| ||||||||     
T  23383736 atgcagattctgttgacttgatgaaaggagggaccaaaggtggaagaatatgaaattacagggacaaaatctaaatcttttttttttcagggactaaaat 23383835  T
Q  100 cagaattcgctaaaattac 118  Q
    |||||||| |||| |||||    
T  23383836 cagaattcactaatattac 23383854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 44816977 - 44816857
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa---ttttatttttacagagactaaa 97  Q
    |||||||||||||| ||||| || || ||| |||||||||||||||||||||||||||||||||||||||| |||   |||| |||||||||||||||||    
T  44816977 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatcaaaatctttttttttttacagagactaaa 44816878  T
Q  98 accagaattcgctaaaattac 118  Q
    |||  |||||||||| |||||    
T  44816877 accgaaattcgctaatattac 44816857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 20419776 - 20419891
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaaccag 102  Q
    ||||| || |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||  |||| ||||||||| |||||||||| |    
T  20419776 agattttgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccgg 20419875  T
Q  103 aattcgctaaaattac 118  Q
    |||||| ||| |||||    
T  20419876 aattcgttaatattac 20419891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24195032 - 24195142
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||| |||||||| || ||| |||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||| |||||||||    
T  24195032 atgcagattctgcttacgtgatggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaaac 24195131  T
Q  100 cagaattcgct 110  Q
    | || ||||||    
T  24195132 cggatttcgct 24195142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 10409610 - 10409727
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| ||||| || || ||| || ||||||||||||||||| ||||||||| |||||||||||||| || ||||||||| |||||||| |    
T  10409610 atgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctaaaattacagagacaaaatctaaatcttttttttacagggactaaaatc 10409709  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  10409710 ggaattcgctaatattac 10409727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 48648465 - 48648581
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||  |||||||||||||| || |||||| ||||||||||| |    
T  48648465 atgcagattctgttgacgtgatgaaaggagggaccagaagtggaagaatctaaaattacatagacaaaatctaaatctt-tttttatagagactaaaatc 48648563  T
Q  101 agaattcgctaaaattac 118  Q
      |||||||||| |||||    
T  48648564 gaaattcgctaatattac 48648581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 48672421 - 48672301
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa---ttttatttttacagagactaaa 97  Q
    |||||||||||||||||||| || || ||| || ||||||||||||||||||||||||||| ||| |||||||||   |||| |||||||||||||||||    
T  48672421 atgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagagacgaaatctaaatctttttttttttacagagactaaa 48672322  T
Q  98 accagaattcgctaaaattac 118  Q
    |||  ||||| |||| |||||    
T  48672321 accgaaattcactaatattac 48672301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 25772505 - 25772388
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| ||||| || || ||| || ||||||||||||||| |||||||||| ||||||||||||||| || |||||||||| ||||||| |    
T  25772505 atgcagattctgcttacgtggtggaatgagggaacaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttttttttacagaaactaaaatc 25772406  T
Q  101 agaattcgctaaaattac 118  Q
      |||||||||| |||||    
T  25772405 gaaattcgctaatattac 25772388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 31851475 - 31851548
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaa 74  Q
    ||||| |||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  31851475 atgcatattctgctgatgtgatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaa 31851548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 7842546 - 7842470
Alignment:
Q  36 aaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgctaa 112  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||| ||||||||||||||||||||||    
T  7842546 aaaagtggaggaatctgaaattacagggacagaatctaaactttttttttacagggactaaaaccagaattcgctaa 7842470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 38879866 - 38879747
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||||||| ||||| || || ||| |||||||||||||||||| |||||||||||||||||||||||||  |||| |||||||||  |||||||    
T  38879866 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaaa 38879767  T
Q  99 ccagaattcgctaaaattac 118  Q
       ||||||||||| |||||    
T  38879766 ttggaattcgctaatattac 38879747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 7658113 - 7657993
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa---ttttatttttacagagactaaa 97  Q
    ||||||||| |||||||||||||||||||  ||||||||||| |||||| |||||||||| ||||| ||||||||   |||| ||||||||| || ||||    
T  7658113 atgcagattttgctgacgtgatgaaaggatggaccaaaagtgtaagaatttgaaattacatggacataatctaaatctttttttttttacagggattaaa 7658014  T
Q  98 accagaattcgctaaaattac 118  Q
    |||  |||||||||| |||||    
T  7658013 accgaaattcgctaatattac 7657993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20458927 - 20459044
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||| |||||| |||| |||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||  ||| ||||    
T  20458927 atgcaaattctgttgacttgatcaaaggagggaccaaaagtggaagaatctgaaattacagtgacaaaatctaaatctttttttttacaggtact-aaac 20459025  T
Q  100 cagaattcgctaaaattac 118  Q
    | |||||| |||| |||||    
T  20459026 cggaattccctaatattac 20459044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 41600100 - 41599982
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||| ||||| || || ||| || |||| ||||||||||||||||||||||||||||||||||||| ||| |||||| |  |||||||||    
T  41600100 atgcagattctgctaacgtggtggaatgagggatcaaatgtggaagaatctgaaattacagggacaaaatctaaatatttttttttatatggactaaaac 41600001  T
Q  100 cagaattcgctaaaattac 118  Q
    |  |||||||||| |||||    
T  41600000 cgaaattcgctaatattac 41599982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20963637 - 20963518
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||||||| | |||  | || ||| |||||||||||||||||||| ||||||||||||| |||||||||  |||| ||||||||| ||||||||    
T  20963637 atgcagattctgcttatgtggcggaatgagggaccaaaagtggaagaatctaaaattacagggactaaatctaaatcttttttttttacagggactaaaa 20963538  T
Q  99 ccagaattcgctaaaattac 118  Q
    | ||||||| |||| |||||    
T  20963537 ctagaattcactaatattac 20963518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 10409516 - 10409399
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| |||||| |||||||||| || ||| |||||| |||||||||||||||||| ||||||||||||||| ||| | |||||| | |||||| |    
T  10409516 atgcagattttgctgaagtgatgaaagaagggactaaaagtagaagaatctgaaattacaaggacaaaatctaaatctttttatttaca-acactaaacc 10409418  T
Q  100 cagaattcgctaaaattac 118  Q
    || |||||||||| |||||    
T  10409417 caaaattcgctaatattac 10409399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 23383642 - 23383523
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||||||| ||||| || || ||| ||| |||| ||||||||| |||||||| ||||||||||||||||  |||| |||||| || ||||||||    
T  23383642 atgcagattctgcttacgtggtggaatgagggacaaaaaatggaagaatatgaaattatagggacaaaatctaaatcttttttttttatagggactaaaa 23383543  T
Q  99 ccagaattcgctaaaattac 118  Q
    || |||||| |||| |||||    
T  23383542 ccggaattcactaatattac 23383523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 31851381 - 31851241
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||| ||||| ||| || ||||||||||| ||| ||||||||||  |||| |||||||||||| |||||||||  ||||||| |    
T  31851381 atgcagattctgctgacgtggtgaaaagagagatcaaaagtggaaaaatatgaaattacaatgacagaatctaaatttt-tttttacaggaactaaaatc 31851283  T
Q  101 agaattcgctaaaatt------acgaaaagaggtatttacct 136  Q
      ||||| |||| |||      ||||||||||||||||||||    
T  31851282 gaaattcactaatattaaaaggacgaaaagaggtatttacct 31851241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 14800894 - 14801002
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaacca 101  Q
    |||||||||||||||  | | ||  ||| ||||||  ||||||||||||||||| |||||||||||||||||| |||| ||||||||| ||||||||||     
T  14800894 gcagattctgctgactagttcaagtgagagaccaattgtggaagaatctgaaatgacagggacaaaatctaaacttttttttttacagggactaaaaccg 14800993  T
Q  102 gaattcgct 110  Q
     ||||||||    
T  14800994 aaattcgct 14801002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 15247886 - 15247994
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaacca 101  Q
    |||||||||||||||  | | ||  ||| ||||||  ||||||||||||||||| |||||||||||||||||| |||| ||||||||| ||||||||||     
T  15247886 gcagattctgctgactagttcaagtgagagaccaattgtggaagaatctgaaatgacagggacaaaatctaaacttttttttttacagggactaaaaccg 15247985  T
Q  102 gaattcgct 110  Q
     ||||||||    
T  15247986 aaattcgct 15247994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 48648403 - 48648306
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaa 98  Q
    ||||||||||| || ||||| || || ||| |||||||| || || |||||||||||||||||||||||||||||| || || |||||  ||||||||    
T  48648403 atgcagattctacttacgtggtggaatgagggaccaaaaatgaaaaaatctgaaattacagggacaaaatctaaatctttttcttacatggactaaaa 48648306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1250348 - 1250273
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 76  Q
    |||||||||| ||||||||| || || ||| |||||||||||||||||||| |||||| | ||||||||| |||||    
T  1250348 atgcagattcagctgacgtggtggaatgagagaccaaaagtggaagaatctaaaattaaaaggacaaaatttaaat 1250273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 14630437 - 14630368
Alignment:
Q  40 gtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgct 110  Q
    ||||||||||||||||| ||||||||| |||||||  ||| ||||||||| |||||||||| |||||||||    
T  14630437 gtggaagaatctgaaatgacagggacagaatctaaccttt-tttttacagggactaaaaccggaattcgct 14630368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 14795652 - 14795582
Alignment:
Q  40 gtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgct 110  Q
    ||||||||||||||||| ||||||||| ||| |||| ||| |||||||| ||||||||||  |||||||||    
T  14795652 gtggaagaatctgaaataacagggacataatataaactttttttttacaaagactaaaactggaattcgct 14795582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 15242644 - 15242574
Alignment:
Q  40 gtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgct 110  Q
    ||||||||||||||||| ||||||||| ||| |||| ||| |||||||| ||||||||||  |||||||||    
T  15242644 gtggaagaatctgaaataacagggacataatataaactttttttttacaaagactaaaactggaattcgct 15242574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 14646924 - 14646996
Alignment:
Q  40 gtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaaccagaattcgct 110  Q
    ||||||||||||||||| ||||||| | ||||||||  |||| ||||||||| |||||||||| |||||||||    
T  14646924 gtggaagaatctgaaatgacagggatagaatctaaactttttttttttacagggactaaaaccggaattcgct 14646996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 6466087 - 6466159
Alignment:
Q  47 aatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||||||||||||| ||||| |||| |||| ||| ||||||||||||||||||||  |||||||||| |||||    
T  6466087 aatctgaaattacacggacagaatccaaatctttttttttacagagactaaaaccgaaattcgctaatattac 6466159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 33131741 - 33131665
Alignment:
Q  35 caaaagtggaagaatctgaaattacagggacaaaatctaaattttatt-tttacagagactaaaaccagaattcgct 110  Q
    |||||| ||||||||||||||| | ||||||| |||||||||||| || ||||||| |||||||||| ||| |||||    
T  33131741 caaaagcggaagaatctgaaatgatagggacagaatctaaatttttttatttacagggactaaaaccggaaatcgct 33131665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 33162771 - 33162855
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttattttt 85  Q
    |||||||||||||||||||| ||||| ||  ||| |||||||||||||| ||||||||||  |||| |||| |||| || |||||    
T  33162771 atgcagattctgctgacgtggtgaaatgaaagactaaaagtggaagaatttgaaattacaatgacataatccaaatctttttttt 33162855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 44817071 - 44817142
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatct 72  Q
    |||||||||||  |||| |||||||| ||| ||||||||||| |||||| |||||||| | |||||||||||    
T  44817071 atgcagattctattgacttgatgaaaagagggaccaaaagtgaaagaatatgaaattataaggacaaaatct 44817142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 24194975 - 24194921
Alignment:
Q  32 gaccaaaagtg-gaagaatctgaaattacagggacaaaatctaaattttattttt 85  Q
    ||||||||||| || ||||||||||||||||||||||||||||||| || |||||    
T  24194975 gaccaaaagtgagaggaatctgaaattacagggacaaaatctaaatctttttttt 24194921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 23704876 - 23704843
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggac 65  Q
    ||||||||||||| ||||||||||||||||||||    
T  23704876 gaccaaaagtggaggaatctgaaattacagggac 23704843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 48648416 - 48648457
Alignment:
Q  24 aaaggagtgaccaaaagtggaagaatctgaaattacagggac 65  Q
    ||||||| |||||||| |||| ||||||||||||||||||||    
T  48648416 aaaggagggaccaaaattggaggaatctgaaattacagggac 48648457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 24195017 - 24194973
Alignment:
Q  21 atgaaaggagtgaccaaaagtggaagaatctgaaattacagggac 65  Q
    |||||| ||| ||||||||||||| ||||||||||||| ||||||    
T  24195017 atgaaatgagggaccaaaagtggaggaatctgaaattatagggac 24194973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 52552924 - 52553042
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||| ||||||||| |||||||||    
T  52552924 atgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatctttttttttacagggactaaaac 52553023  T
Q  100 cagaattcgctaaaattac 118  Q
     |||||||||||| |||||    
T  52553024 tagaattcgctaatattac 52553042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 14262272 - 14262390
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  14262272 atgcagattctgctgacgtgatgaaaggagggactaaaagtggaacaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaac 14262371  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  14262372 cggaattcgctaatattac 14262390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 33372548 - 33372430
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| | |||||||  ||||||||    
T  33372548 atgcagattttgctgacgtgatgaaaggagggaccaaaagtggaataatctgaaattacagggacaaaatctaaatctttttatttacaggaactaaaac 33372449  T
Q  100 cagaattcgctaaaattac 118  Q
    ||||||||||||| |||||    
T  33372448 cagaattcgctaatattac 33372430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 47575508 - 47575614
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||| |||||||||||| |||| ||||||||| ||||||||||    
T  47575508 atgcagattctgctgacgtgatgaaaggagagaccaaaagttgaaaaatctgaaattacagagacaaaatctaatttttttttttacagggactaaaacc 47575607  T
Q  101 agaattc 107  Q
    |||||||    
T  47575608 agaattc 47575614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 30500281 - 30500394
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaa 104  Q
    ||||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||| |||||||||  |||    
T  30500281 agattttgctgacgtgatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaattttttttttacagggactaaaactggaa 30500380  T
Q  105 ttcgctaaaattac 118  Q
    |||||||| |||||    
T  30500381 ttcgctaatattac 30500394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 14171822 - 14171940
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||| |||||||||    
T  14171822 atgcagattttgctgacgtgatgaaaggaaggaccaaaagtggaagaatcagaaattacagggacaaaatctaaatctttttatttacagggactaaaac 14171921  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  14171922 cggaattcgctaatattac 14171940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 16722133 - 16722015
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaac 99  Q
    |||||||||||| |||| ||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||||||||    
T  16722133 atgcagattctgttgacttgatgaaagaagggaccaaaagtggaagaatctgaaattacatggacaaaatctaaatttttttttttacagtgactaaaac 16722034  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  16722033 cggaattcgctaatattac 16722015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 45970057 - 45969939
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||| |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  45970057 atgcagattctgttgacttgatgaaaggagagaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaac 45969958  T
Q  100 cagaattcgctaaaattac 118  Q
    | |||||| |||| |||||    
T  45969957 cggaattcactaatattac 45969939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 43572629 - 43572732
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccag 102  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| |    
T  43572629 gcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacagaatctaaattttttttttacaggaactaaaaccgg 43572728  T
Q  103 aatt 106  Q
    ||||    
T  43572729 aatt 43572732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 9267117 - 9266999
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||| ||||| || || ||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  9267117 atgcagattctgcttacgtgctggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaac 9267018  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  9267017 cggaattcgctaatattac 9266999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14162013 - 14161895
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||| ||| |||||| ||  ||||||||    
T  14162013 atgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacataatctaaatctttttttttataggaactaaaac 14161914  T
Q  100 cagaattcgctaaaattac 118  Q
      ||||||||||| |||||    
T  14161913 tggaattcgctaatattac 14161895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 19113001 - 19113142
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||| ||| ||||||||| |||||||||    
T  19113001 atgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggataaaatctaaatctttttttttacagggactaaaac 19113100  T
Q  100 cagaattcgctaaaatt------acgaaaagaggtatttacc 135  Q
    | ||||||| ||| |||      |||||||||||||||||||    
T  19113101 cggaattcgttaatattatagggacgaaaagaggtatttacc 19113142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20853932 - 20854049
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| || |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  20853932 atgcagattatgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacag-gactaaaac 20854030  T
Q  100 cagaattcgctaaaattac 118  Q
    |  |||||||||| |||||    
T  20854031 cgaaattcgctaatattac 20854049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 43572533 - 43572413
Alignment:
Q  2 tgcagattctgctgacgtgatga---aaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaa 97  Q
    |||||||||||||||| ||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||    
T  43572533 tgcagattctgctgacttgatgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatttttctttttacagggactaaa 43572434  T
Q  98 accagaattcgctaaaattac 118  Q
    |||  |||||||||| |||||    
T  43572433 accgaaattcgctaatattac 43572413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 30500183 - 30500067
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||| || ||  || |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  30500183 atgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatttt-tttttacagggactaaaacc 30500085  T
Q  101 agaattcgctaaaattac 118  Q
      |||||||||| |||||    
T  30500084 gaaattcgctaatattac 30500067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4204850 - 4204752
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaac 99  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||  ||||||||    
T  4204850 atgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacataatctaaatcttttttttacaggaactaaaac 4204752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5800747 - 5800629
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||||||||  || ||||||||| |||||||||    
T  5800747 atgcagattctgctgacgtgatgaaaggagggaccaaaaatggaagaatatgaaattacagggacataatctaaatccttttttttacagggactaaaac 5800648  T
Q  100 cagaattcgctaaaattac 118  Q
    |  |||||| ||| |||||    
T  5800647 cgaaattcgttaatattac 5800629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14262178 - 14262060
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||| ||| || ||  || ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||    
T  14262178 atgcagattctgctgatgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatatttttttttacaaggactaaaac 14262079  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  14262078 cggaattcgctaatattac 14262060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14171728 - 14171611
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||| || || ||| || ||||||||||||||| |||||||||||||||||||||||||| || |||||||||| | ||||| |    
T  14171728 atgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatttgaaattacagggacaaaatctaaatcttttttttacagaaattaaaatc 14171629  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  14171628 ggaattcgctaatattac 14171611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 45003635 - 45003519
Alignment:
Q  4 cagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccag 102  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||  ||||| || |||| ||||| |    
T  45003635 cagattctgttgacgtgatgaaaggagggacaaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttatagggactgaaaccgg 45003536  T
Q  103 aattcgctaaaattacg 119  Q
    |||| ||||| ||||||    
T  45003535 aatttgctaatattacg 45003519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 17649246 - 17649356
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||| |||| |||| ||||||| ||||||| |||||| |||||||||||||||||||||||||||||| || ||||| |||  |||||||||    
T  17649246 atgcagattctgttgacttgataaaaggagagaccaaatgtggaataatctgaaattacagggacaaaatctaaatcttttttttccaggaactaaaacc 17649345  T
Q  101 agaattcgcta 111  Q
     ||||||||||    
T  17649346 ggaattcgcta 17649356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 35995914 - 35996029
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| | |||||| |||||  ||| ||||||||| |||||||| |    
T  35995914 atgcagattctgcggacgtgatgaaagaagggaccaaaagtggaagaatctgaaattactgagacaaattctaa--tttttttttacagggactaaaatc 35996011  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  35996012 ggaattcgctaatattac 35996029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 49986652 - 49986551
Alignment:
Q  19 tgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaaccagaattcgctaaaatt 116  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||  |||| ||||||||| |||||||||| |||||| |||| |||    
T  49986652 tgatgaaaggagagaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttttttacagtgactaaaaccggaattctctaatatt 49986553  T
Q  117 ac 118  Q
    ||    
T  49986552 ac 49986551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 14162107 - 14162224
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||| ||| |||||||||| || ||  || ||||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||| ||||||||||    
T  14162107 atgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctcttttttacagggactaaaacc 14162206  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  14162207 ggaattcgctaatattac 14162224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15328696 - 15328815
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||||||||||||| || ||  || |||||||||||||| |||||||||||||||||||||||||||||  |||| ||||||  | ||||||||    
T  15328696 atgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatcttttttttttattgggactaaaa 15328795  T
Q  99 ccagaattcgctaaaattac 118  Q
    ||| |||||||||| |||||    
T  15328796 ccaaaattcgctaatattac 15328815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 19112907 - 19112788
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||||||| ||||| || ||  || |||||||||||||||||| ||||||| |||||||||||||||||  |||| ||||||||| ||||||||    
T  19112907 atgcagattctgcttacgtggtggaataagggaccaaaagtggaagaatatgaaattccagggacaaaatctaaatcttttttttttacagggactaaaa 19112808  T
Q  99 ccagaattcgctaaaattac 118  Q
    || ||||||||||| |||||    
T  19112807 ccggaattcgctaatattac 19112788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 21633038 - 21632940
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaa 98  Q
    |||||||||||| |||| |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| || ||| ||||||||| ||||||||    
T  21633038 atgcagattctgttgacttgatgaaaggagggaccaaaagtgaaagaatctgaaattacagggacaacatctagatctttttttttacagggactaaaa 21632940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21633132 - 21633250
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||||| || ||||| || || ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| || |||||||||    
T  21633132 atgcagattcttcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaac 21633231  T
Q  100 cagaattcgctaaaattac 118  Q
       |||||||||| |||||    
T  21633232 tgaaattcgctaatattac 21633250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 38283688 - 38283574
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaaccaga 103  Q
    |||||||||||||||||||||||||| || ||||||||||| ||| |||||||| ||| |||||||||||| |||| ||||||||  |||||||||| ||    
T  38283688 agattctgctgacgtgatgaaaggagggatcaaaagtggaacaatatgaaattataggaacaaaatctaaatttttttttttacaaggactaaaaccgga 38283589  T
Q  104 attcgctaaaattac 118  Q
    ||||| ||| |||||    
T  38283588 attcgttaatattac 38283574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38283786 - 38283864
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaatttt 79  Q
    ||||||||||||||||||||||||||  || || |||||||||||||||||||||||| ||||||||||||||||||||    
T  38283786 atgcagattctgctgacgtgatgaaataagggatcaaaagtggaagaatctgaaattatagggacaaaatctaaatttt 38283864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9267211 - 9267328
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||| |||| |||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||   | | | ||||| |||||||| |    
T  9267211 atgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgatattacagggacaaaatctaaaaaatttatatacagggactaaaatc 9267310  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  9267311 ggaattcgctaatattac 9267328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 45003732 - 45003849
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| ||||| || || ||| |||||||||||||||||| |||||||| |||||| |||||||||| || |||||||||  |||||||||    
T  45003732 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattatagggactaaatctaaatcttttttttacaggaactaaaacc 45003831  T
Q  101 agaattcgctaaaattac 118  Q
      |||||||||| |||||    
T  45003832 gaaattcgctaatattac 45003849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 11003874 - 11003756
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||| ||| || |||| |||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| | ||| | ||||||| |||||||||    
T  11003874 atgcatattttgttgacttgatgaaaggatggaccaaaagtggaagaatctgaaattacaaggacaaaatctaagtctttttatttacagggactaaaac 11003775  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||| ||| |||||    
T  11003774 cggaattcggtaatattac 11003756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 35995820 - 35995746
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 75  Q
    |||||||||||||| ||||| || || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35995820 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 35995746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 52552834 - 52552734
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat---tttatttttacagagactaaa 97  Q
    ||||||||||||||||| || || ||  || || ||||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||    
T  52552834 atgcagattctgctgacatggtggaataagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctatttttttttacagagactaaa 52552735  T
Q  98 a 98  Q
    |    
T  52552734 a 52552734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 32998371 - 32998486
Alignment:
Q  2 tgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacca 101  Q
    |||| ||||||||||| || | ||| ||| ||| ||||||||| ||||||||||||||||||||| |||||||| ||| |||||||||  ||||| ||||    
T  32998371 tgcaaattctgctgacatggttaaacgagggactaaaagtggaggaatctgaaattacagggacagaatctaaacttt-tttttacaggaactaacacca 32998469  T
Q  102 gaattcgctaaaattac 118  Q
    ||||||||||| |||||    
T  32998470 gaattcgctaatattac 32998486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 33372641 - 33372759
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||| || || | | || |||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||  |||||||     
T  33372641 atgcagattctgctgacgtggtggaatggg-gatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttaacaggaactaaaat 33372739  T
Q  100 cagaattcgctaaaattacg 119  Q
    |  |||||||||| ||||||    
T  33372740 cgaaattcgctaatattacg 33372759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 15328602 - 15328507
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaa 98  Q
    |||||||||||| ||||||||||||| ||| |||  ||| ||||||||| ||||||||||||||||||||||||  ||| ||||||||| ||||||||    
T  15328602 atgcagattctgttgacgtgatgaaaagagggacacaaactggaagaatatgaaattacagggacaaaatctaa--tttttttttacagggactaaaa 15328507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16722227 - 16722345
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||| || || || ||  || |||||||||||||||||| |||||||||||||||||||||||||| ||| ||| ||||| |||||||||    
T  16722227 atgcagattctgcttacatggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttgtacagggactaaaac 16722326  T
Q  100 cagaattcgctaaaattac 118  Q
       |||||||||| |||||    
T  16722327 tgaaattcgctaatattac 16722345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 36990931 - 36991013
Alignment:
Q  36 aaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||||||||||||||| |||||||||||||| |||||||| ||| ||||||||| ||||||||||  |||||||||| |||||    
T  36990931 aaaagtggaagaatctaaaattacagggacagaatctaaactttttttttacagggactaaaaccgaaattcgctaatattac 36991013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 37016371 - 37016453
Alignment:
Q  36 aaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||||||||||||||| |||||||||||||| |||||||| ||| ||||||||| ||||||||||  |||||||||| |||||    
T  37016371 aaaagtggaagaatctaaaattacagggacagaatctaaactttttttttacagggactaaaaccgaaattcgctaatattac 37016453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 17465616 - 17465721
Alignment:
Q  14 tgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaa 112  Q
    ||||||||||||||||| ||||||||||| |||||||| || ||||||||||||||| ||||| |||  ||||||||||| ||||||   ||||||||||    
T  17465616 tgacgtgatgaaaggagggaccaaaagtgaaagaatctaaagttacagggacaaaatttaaatattttattttacagagattaaaactgaaattcgctaa 17465715  T
Q  113 aattac 118  Q
     |||||    
T  17465716 tattac 17465721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 19720433 - 19720357
Alignment:
Q  43 gaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    ||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||| ||||||||||| |||||    
T  19720433 gaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattac 19720357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20853838 - 20853719
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    ||||||||||| || ||||| || || ||| |||||||||||||||||| |||||||| ||||||||||||||||  |||| ||||||||| |  |||||    
T  20853838 atgcagattctacttacgtggtggaatgagggaccaaaagtggaagaatatgaaattatagggacaaaatctaaatcttttttttttacagggtttaaaa 20853739  T
Q  99 ccagaattcgctaaaattac 118  Q
    ||  |||||||||| |||||    
T  20853738 ccgaaattcgctaatattac 20853719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 45970183 - 45970270
Alignment:
Q  33 accaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||||||||||||||||||||||||||||||||||||| ||||  |||| ||||||||| ||||||||||  ||||| |||| |||||    
T  45970183 accaaaagtggaagaatctgaaattacagggacaaaatttaaatcttttttttttacagggactaaaaccgaaattcactaatattac 45970270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 49986764 - 49986882
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaatt--ttatttttacagagactaaaa 98  Q
    |||||||||||||| ||||| || || ||| |||||||||||||||||| ||||||||||  |||||||||||||||  || |||||||||  |||||||    
T  49986764 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattaca-agacaaaatctaaatttcttttttttacaggaactaaaa 49986862  T
Q  99 ccagaattcgctaaaattac 118  Q
    ||  |||||||||| |||||    
T  49986863 ccgaaattcgctaatattac 49986882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 5800872 - 5800958
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||| |||| ||||| ||||||||||| |||||    
T  5800872 gaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggact-aaaccggaattcgctaatattac 5800958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 35740955 - 35740841
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccag 102  Q
    |||||||||||||| ||| |  |  ||| ||| |||||||||||||| | ||||||||||||||||||||||| ||| ||||||| | |||||||||| |    
T  35740955 gcagattctgctgatgtgttttattgagggactaaaagtggaagaatttaaaattacagggacaaaatctaaacttt-tttttacggggactaaaaccgg 35740857  T
Q  103 aattcgctaaaattac 118  Q
    |||||||||| |||||    
T  35740856 aattcgctaatattac 35740841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 35741823 - 35741938
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccag 102  Q
    |||||||||||||| ||| | ||  ||| ||| ||||| |||||||||| |||| ||||||||| |||||||| ||| ||||||||| |||||||||  |    
T  35741823 gcagattctgctgatgtgttcaattgagggactaaaagcggaagaatctaaaatgacagggacataatctaaactttttttttacagggactaaaactgg 35741922  T
Q  103 aattcgctaaaattac 118  Q
    |||||||||| |||||    
T  35741923 aattcgctaatattac 35741938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17465510 - 17465392
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagg-gacaaaatctaaat-tttatttttacagagactaaaa 98  Q
    |||||||||||||| ||||| || || ||| || ||||| |||||||||||||||||||||| ||| ||||||||||  || |||||||||  |||||||    
T  17465510 atgcagattctgcttacgtggtggaatgagagatcaaaaatggaagaatctgaaattacaggagacgaaatctaaatcattttttttacaggtactaaaa 17465411  T
Q  99 ccagaattcgctaaaatta 117  Q
     ||||||||||||| ||||    
T  17465410 tcagaattcgctaatatta 17465392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 45058761 - 45058843
Alignment:
Q  35 caaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgctaaaatta 117  Q
    ||||| ||||||||||||||||||||| |||||||||||||| |  ||||||| | ||||||||| |||||||||||| ||||    
T  45058761 caaaaatggaagaatctgaaattacagagacaaaatctaaatctcttttttacggggactaaaactagaattcgctaatatta 45058843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 36989975 - 36989861
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccag 102  Q
    |||||||||||||| ||| | ||  ||| ||| |||||||||||||| | |||| ||| ||||| ||| |||| ||| |||||||||  |||||||| ||    
T  36989975 gcagattctgctgatgtgttcaattgagggactaaaagtggaagaatttaaaatgacacggacataatttaaactttttttttacaggaactaaaactag 36989876  T
Q  103 aattcgctaaaatta 117  Q
    |||||||||| ||||    
T  36989875 aattcgctaatatta 36989861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 37015415 - 37015301
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccag 102  Q
    |||||||||||||| ||| | ||  ||| ||| |||||||||||||| | |||| ||| ||||| ||| |||| ||| |||||||||  |||||||| ||    
T  37015415 gcagattctgctgatgtgttcaattgagggactaaaagtggaagaatttaaaatgacacggacataatttaaactttttttttacaggaactaaaactag 37015316  T
Q  103 aattcgctaaaatta 117  Q
    |||||||||| ||||    
T  37015315 aattcgctaatatta 37015301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 32997342 - 32997242
Alignment:
Q  7 attctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaatt 106  Q
    |||||||||||  | | ||| |||||||||||||||||||||||| |||| | | |||   |||||||| ||| ||||||||| |||||||||| |||||    
T  32997342 attctgctgacaagtttaaatgagtgaccaaaagtggaagaatcttaaatgatatggatggaatctaaactttttttttacagggactaaaaccggaatt 32997243  T
Q  107 c 107  Q
    |    
T  32997242 c 32997242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4204944 - 4204999
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaat 56  Q
    ||||||||||| |||||||||| ||| ||| || ||||||||||||||||||||||    
T  4204944 atgcagattctactgacgtgataaaaagagggatcaaaagtggaagaatctgaaat 4204999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 1068920 - 1068972
Alignment:
Q  36 aaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttaca 88  Q
    ||||||||||||||||||||| |||||||||||||  ||| ||| ||||||||    
T  1068920 aaaagtggaagaatctgaaatgacagggacaaaattaaaactttttttttaca 1068972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 3425916 - 3426002
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||||||||||||||||||| |||| | | |||   ||||||| |||| ||||||  | |||||||||| ||||||||||| |||||    
T  3425916 gaccaaaagtggaagaatctcaaatgataaggatggaatctaatttttttttttattgggactaaaaccggaattcgctaatattac 3426002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 3424882 - 3424798
Alignment:
Q  36 aaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||||||||||||||| |||| | |||||  |||||||||  |||| ||||||||| ||| |||||| ||| ||||||| |||||    
T  3424882 aaaagtggaagaatctcaaatgatagggatgaaatctaaactttttttttttacagggaccaaaaccggaaatcgctaatattac 3424798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 16722206 - 16722173
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggac 65  Q
    ||||||||||||| ||||||||||||||||||||    
T  16722206 gaccaaaagtggaggaatctgaaattacagggac 16722173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 49986743 - 49986710
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggac 65  Q
    ||||||||||||| ||||||||||||||||||||    
T  49986743 gaccaaaagtggaggaatctgaaattacagggac 49986710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 27946185 - 27946133
Alignment:
Q  66 aaaatctaaattttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    ||||||||||| || ||||||||| ||||||||||  |||||||||| |||||    
T  27946185 aaaatctaaatcttttttttacagggactaaaaccgaaattcgctaatattac 27946133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 7e-39; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 32017740 - 32017857
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  32017740 atgcatattccgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaacc 32017839  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  32017840 ggaattcgctaatattac 32017857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 9481324 - 9481206
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||||||||  || ||||||||| |||||||||    
T  9481324 atgcagattctgctgacgtgatgaaaggagggaccaaaattggaagaatatgaaattacagggacataatctaaatccttttttttacagggactaaaac 9481225  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  9481224 cggaattcgctaatattac 9481206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9854123 - 9854239
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaatt-ttatttttacagagactaaaac 99  Q
    ||||||||| |||||||||| ||||| ||| |||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||  ||||||||||    
T  9854123 atgcagattttgctgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaattattatttttac--agactaaaac 9854220  T
Q  100 cagaattcgctaaaattac 118  Q
    ||||||||||||| |||||    
T  9854221 cagaattcgctaatattac 9854239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 18500456 - 18500316
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| ||||| || || ||| |||||||||||||||||| |||||||||||||||||||||||||| || || |||||| ||||||||||    
T  18500456 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttcttacagggactaaaacc 18500357  T
Q  101 agaattcgctaaaatt------acgaaaagaggtatttacc 135  Q
      |||||||||| |||      |||||||||||||||||||    
T  18500356 gaaattcgctaatattatagggacgaaaagaggtatttacc 18500316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 30618104 - 30617991
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| ||| |||||||||||||||||||||||||||   |||||| || |||||||| |    
T  30618104 atgcagattctgctgacgtgataaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaatt---tttttaaag-gactaaaatc 30618009  T
Q  101 agaattcgctaaaattac 118  Q
    ||||||| |||| |||||    
T  30618008 agaattcactaatattac 30617991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 10321967 - 10322056
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacaga 90  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||| ||| ||| |||| ||||||||||    
T  10321967 atgcagattctgctgacgtgatgaaaggaaggaccaaaagtgaaagaatctgaaattacagggacataatttaatttttttttttacaga 10322056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 24732076 - 24731959
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaa----attttatttttacagagactaaaacc 100  Q
    ||||| || |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||     |||| ||||||||| ||||||||||    
T  24732076 agattatgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaatttttttttttttttacagggactaaaacc 24731977  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  24731976 ggaattcgctaatattac 24731959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 26385417 - 26385302
Alignment:
Q  4 cagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccag 102  Q
    ||||||||||| ||||| || || ||| |||||||||||||||||| | |||||||||||||||||||||||| ||| ||| ||||  ||||||||||||    
T  26385417 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatataaaattacagggacaaaatctaaatctttttttctacatggactaaaaccag 26385318  T
Q  103 aattcgctaaaattac 118  Q
    |||||||||| |||||    
T  26385317 aattcgctaatattac 26385302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 19284258 - 19284129
Alignment:
Q  14 tgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaa 112  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||   |||||||||  |||||||||||    
T  19284258 tgacatgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttacgtggactaaaactggaattcgctaa 19284159  T
Q  113 aatt------acgaaaagaggtatttacct 136  Q
     |||      ||||||||||||||||||||    
T  19284158 tattacatgaacgaaaagaggtatttacct 19284129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 14681024 - 14680927
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaa 98  Q
    |||||||||||||||||||| ||||| ||  |||||||||||||||||| ||||||||||  ||||||||||||||| | ||||||||| ||||||||    
T  14681024 atgcagattctgctgacgtggtgaaatgaaggaccaaaagtggaagaatatgaaattacaaagacaaaatctaaattatttttttacagggactaaaa 14680927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 33637701 - 33637586
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||| | ||||||||||||| ||   |||||| ||||||||||     
T  33637701 atgcagattctgctgacgtaatgaaaggagggaccaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaact 33637603  T
Q  101 agaattcgctaaaatta 117  Q
    | |||| ||||| ||||    
T  33637602 aaaatttgctaatatta 33637586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 2299545 - 2299667
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatcta-----aattttatttttacagagacta 95  Q
    |||||||||||| |||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||      ||||| |||| ||||  ||||    
T  2299545 atgcagattctgttgacttgatgaaaggagggataaaaagtggaagaatctgaaattacagggacaaaatctattatttatttttttttaacaggaacta 2299644  T
Q  96 aaaccagaattcgctaaaattac 118  Q
    ||||| ||||||||||| |||||    
T  2299645 aaaccggaattcgctaatattac 2299667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 3230099 - 3230216
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||| ||||||||||||| || |||||||||||| |||||| |||||||| | ||||||||||||||| |||  |||||||| ||||||||     
T  3230099 atgcagattctgttgacgtgatgaaaaga-tgaccaaaagtgaaagaatatgaaattatatggacaaaatctaaatcttttattttacagggactaaaat 3230197  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  3230198 cggaattcgctaatattac 3230216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 9154990 - 9154909
Alignment:
Q  33 accaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaaa 113  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| | ||||||||||||    
T  9154990 accaaaactggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgctaaa 9154909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 24732174 - 24732271
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaa 97  Q
    |||||||||||||| ||||| || || ||| |||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||| |||||||    
T  24732174 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacatggacaaaatctaaatctttttttttacagggactaaa 24732271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 26385523 - 26385628
Alignment:
Q  14 tgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaa 112  Q
    |||| |||||||||||| |||||||||||||||||| ||||||| |||| |||| |||||||| ||| ||||||||| |||||||| | |||||||||||    
T  26385523 tgacttgatgaaaggagagaccaaaagtggaagaatatgaaattgcaggaacaacatctaaatctttgtttttacagggactaaaatcggaattcgctaa 26385622  T
Q  113 aattac 118  Q
     |||||    
T  26385623 tattac 26385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 33714629 - 33714507
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa---ttttatttttacagagac--ta 95  Q
    |||||||||||||| ||||| || || ||| |||||||||||||||||| |||||||||| ||||||||||||||   |||| ||||||||| |||  ||    
T  33714629 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttttacagggactata 33714530  T
Q  96 aaaccagaattcgctaaaattac 118  Q
    ||||| ||||||||||| |||||    
T  33714529 aaaccggaattcgctaatattac 33714507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 30459043 - 30458959
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttattttt 85  Q
    |||||||||||||||||||| ||||| ||| ||| |||||| ||||||||||||||||||| |||| ||||||||| || |||||    
T  30459043 atgcagattctgctgacgtggtgaaatgagagactaaaagttgaagaatctgaaattacagtgacataatctaaatctttttttt 30458959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 32017678 - 32017570
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||| || ||  |  |||||||||||||||||||||||||||||   ||||||||||||| || |||||||||||||||||| |    
T  32017678 atgcagattctgctgacgtggtggaataaaggaccaaaagtggaagaatctgaaattaca--aacaaaatctaaatgtt-tttttacagagactaaaatc 32017582  T
Q  101 agaattcgctaa 112  Q
      ||||||||||    
T  32017581 gaaattcgctaa 32017570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 17142798 - 17142700
Alignment:
Q  22 tgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    ||||| ||| |||||||||||||||||| |||||||||||||||| ||||||||  |||| ||||||||||||||||| |   |||||||||| |||||    
T  17142798 tgaaacgagagaccaaaagtggaagaatttgaaattacagggacataatctaaattttttttttttacagagactaaacctgaaattcgctaatattac 17142700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 9481418 - 9481516
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaa 98  Q
    ||||| ||| |||||||||| || ||  || ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| ||| ||||    
T  9481418 atgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctttttttttacagggacgaaaa 9481516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 10321872 - 10321757
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||| ||||||||||| ||||| ||| || |||||||| |||||| |||||||||||||| | |||||||  | | ||||| ||| ||||||||||    
T  10321872 atgcagatactgctgacgtggtgaaatgagggagcaaaagtgtaagaatatgaaattacagggatataatctaa--tattttttttcagggactaaaacc 10321775  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  10321774 ggaattcgctaatattac 10321757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 30459141 - 30459253
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaa 104  Q
    ||||| |||| ||||||||||||||| ||||||||||| |||||||||||||||||  |||| |||| ||  ||| ||||||| |||| |||||||  ||    
T  30459141 agattatgctaacgtgatgaaaggagagaccaaaagtgaaagaatctgaaattacaatgacataatc-aatctttttttttacggagattaaaaccgaaa 30459239  T
Q  105 ttcgctaaaattac 118  Q
    |||||||| |||||    
T  30459240 ttcgctaatattac 30459253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 30618201 - 30618281
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttattttt 85  Q
    |||||||||||||||| || ||  || ||| |||||||||||||||| |||||||||||||||||||||||| || |||||    
T  30618201 agattctgctgacgtggtggaataagagacaaaaagtggaagaatctaaaattacagggacaaaatctaaatatttttttt 30618281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 14681119 - 14681236
Alignment:
Q  2 tgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaacc 100  Q
    |||||||||| |||||||  | |||  || ||||||||||||| |||||| ||||| || ||||||| ||||||| |||  |||||||||||||||| ||    
T  14681119 tgcagattctactgacgtagttaaataagggaccaaaagtggaggaatctaaaattgcaaggacaaagtctaaatattttattttacagagactaaagcc 14681218  T
Q  101 agaattcgctaaaattac 118  Q
    | |||||||||| |||||    
T  14681219 aaaattcgctaatattac 14681236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 21069626 - 21069546
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaaccagaattcgct 110  Q
    |||| ||| ||||||||||||| |||||||||||| ||||||||  |||| ||||||||| |||||||||| |||||||||    
T  21069626 gacctaaaatggaagaatctgatattacagggacagaatctaaactttttttttttacagggactaaaaccggaattcgct 21069546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 21070803 - 21070883
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaaccagaattcgct 110  Q
    |||| ||||||||||||||||| |||||||||| | ||||||||  |||| |||||||||||||||| ||| |||||||||    
T  21070803 gacctaaagtggaagaatctgatattacagggatagaatctaaactttttttttttacagagactaataccggaattcgct 21070883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 33637764 - 33637831
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaa 68  Q
    |||||||||||||||||||| || || ||| || |||||||| |||||| ||||||||||||||||||    
T  33637764 atgcagattctgctgacgtggtggaatgagggatcaaaagtgaaagaatatgaaattacagggacaaa 33637831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18500583 - 18500641
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattac 59  Q
    |||||||||||| || | |||||||||||| |||||||||||||||||||| |||||||    
T  18500583 atgcagattctgttgccttgatgaaaggagggaccaaaagtggaagaatctaaaattac 18500641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 15941409 - 15941337
Alignment:
Q  37 aaagtggaagaatctgaaattacagggacaaaatctaaatt-ttatttttacagagactaaaaccagaattcg 108  Q
    ||||||| ||||||| ||||||| | || |||||||||||| || ||||||||| |||||||||| |||||||    
T  15941409 aaagtggtagaatctaaaattacggagataaaatctaaattattttttttacagggactaaaaccggaattcg 15941337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 17142801 - 17142834
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggac 65  Q
    ||||||||||||| ||||||||||||||||||||    
T  17142801 gaccaaaagtggaggaatctgaaattacagggac 17142834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 26385441 - 26385474
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggac 65  Q
    ||||||||||||| ||||||||||||||||||||    
T  26385441 gaccaaaagtggaggaatctgaaattacagggac 26385474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 30618148 - 30618112
Alignment:
Q  29 agtgaccaaaagtggaagaatctgaaattacagggac 65  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  30618148 agtgatcaaaagtgggagaatctgaaattacagggac 30618112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15868 - 15982
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||   |||| ||||||||||||||||||||    
T  15868 atgcagattctgctgacgtgatgaaaggagagaccaaaagtgaaagaatatgaaattacagggacaaaatct---ttttttttttacagagactaaaacc 15964  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  15965 ggaattcgctaatattac 15982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 5e-37; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22263427 - 22263547
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa---ttttatttttacagagactaaa 97  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||   |||| |||||||||||||||||    
T  22263427 atgcagattatgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctgaatctttttttttttacagagactaaa 22263526  T
Q  98 accagaattcgctaaaattac 118  Q
    ||| ||||||||||| |||||    
T  22263527 accggaattcgctaatattac 22263547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 26236269 - 26236151
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||| ||| ||| ||||| |||||||||    
T  26236269 atgcaaattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatctgaaattacagggacaaaatataaatctttttttatacagggactaaaac 26236170  T
Q  100 cagaattcgctaaaattac 118  Q
    ||||||||||||| |||||    
T  26236169 cagaattcgctaatattac 26236151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 19251606 - 19251495
Alignment:
Q  7 attctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaatt 106  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| || ||||||||| ||||||||||  ||||    
T  19251606 attctgctgatgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccgaaatt 19251507  T
Q  107 cgctaaaattac 118  Q
    |||||| |||||    
T  19251506 cgctaatattac 19251495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 23854902 - 23855008
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||| | ||||||||||    
T  23854902 atgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatataaaattacagagacaaaatctaaattttttttttacggggactaaaacc 23855001  T
Q  101 agaattc 107  Q
     ||||||    
T  23855002 ggaattc 23855008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 26135959 - 26135841
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||     
T  26135959 atgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaat 26135860  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  26135859 cggaattcgctaatattac 26135841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17463233 - 17463117
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||| |||| |||||||| ||| |||||||||||| |||| ||||||||||||||||||||||||| |||| ||||||||| ||||||||||    
T  17463233 atgcagattctgttgacttgatgaaatgagggaccaaaagtgggagaacctgaaattacagggacaaaatctaatttttttttttacagcgactaaaacc 17463134  T
Q  101 agaattcgctaaaatta 117  Q
     ||||||||||| ||||    
T  17463133 ggaattcgctaatatta 17463117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 34548712 - 34548598
Alignment:
Q  4 cagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccaga 103  Q
    |||||||| |||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||| || ||||||||| ||||||||||| |    
T  34548712 cagattctactgacgtgatgaaaggagtgaccaaaggtggaacaatatgaaattacatggacaaaatctaaatcttttttttacagggactaaaaccaaa 34548613  T
Q  104 attcgctaaaattac 118  Q
    |||| |||| |||||    
T  34548612 attcactaatattac 34548598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 39878244 - 39878126
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||| | | ||||||||| |||||||||    
T  39878244 atgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattacagatacataatctaaatatctttttttacagggactaaaac 39878145  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  39878144 cggaattcgctaatattac 39878126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20498887 - 20498771
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||| ||||||||||    
T  20498887 atgcagattctactgacgtgataaaaggagggaccaaaagtggaagaatctgaaa-tacagggacataatctaaatattttttttacagggactaaaacc 20498789  T
Q  101 agaattcgctaaaattac 118  Q
      |||||||||| |||||    
T  20498788 gtaattcgctaatattac 20498771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22263333 - 22263216
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||| || ||  || |||||||||||||||||| |||||||||||||||||||||||||| || |||| | |||||||||||||    
T  22263333 atgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttcatagagactaaaacc 22263234  T
Q  101 agaattcgctaaaattac 118  Q
    ||||||| |||| |||||    
T  22263233 agaattctctaatattac 22263216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 17850822 - 17850940
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaa---attttatttttacagagactaaa 97  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||   ||||||  ||||||| |||||||    
T  17850822 atgcagattttgctgacgtgatgaaaagagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaagcatttta--tttacagtgactaaa 17850919  T
Q  98 accagaattcgctaaaattac 118  Q
    |||  |||||||||| |||||    
T  17850920 accgaaattcgctaatattac 17850940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 15106303 - 15106420
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||| |||||||||| || || ||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |    
T  15106303 atgcagattttgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatttt-tttttacagggactaaaatc 15106401  T
Q  101 agaattcgctaaaattacg 119  Q
      |||||||||| ||||||    
T  15106402 gaaattcgctaatattacg 15106420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 19251706 - 19251823
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||| ||||| ||| |||| ||||||||||||| |||||||||| ||||| ||||||||| || ||||||||| ||||||||||    
T  19251706 atgcagattctgctgacgtggtgaaatgagggaccgaaagtggaagaatatgaaattacaaggacagaatctaaatcttttttttacagggactaaaacc 19251805  T
Q  101 agaattcgctaaaattac 118  Q
     |||||| |||| |||||    
T  19251806 ggaattcactaatattac 19251823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 26560790 - 26560909
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaa--attttatttttacagagactaaaa 98  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| | |||||||||||||   |||| ||||||| | ||||||||    
T  26560790 atgcagattctgctgacgtgatgaaaggagagaccaaaagtggaagaatatgaaattatatggacaaaatctaatttttttttttttaccgggactaaaa 26560889  T
Q  99 ccagaattcgctaaaattac 118  Q
     | ||||||||||| |||||    
T  26560890 tcggaattcgctaatattac 26560909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 42670955 - 42671067
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||| |||||||||  || ||||||||| |||||||||    
T  42670955 atgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatatgaaattacagggacataatctaaatccttttttttacagggactaaaac 42671054  T
Q  100 cagaattcgctaa 112  Q
       ||||||||||    
T  42671055 tgaaattcgctaa 42671067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 15106209 - 15106090
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||  ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||| ||| | ||||||| || ||||||    
T  15106209 atgcagatttagctgacgtgatgaaaggagggaccaaaagtggaataatctaaaattacagggacaaaatctaaatctttttatttacagggattaaaac 15106110  T
Q  100 cagaattcgctaaaattacg 119  Q
    |  |||||||||| ||||||    
T  15106109 cgaaattcgctaatattacg 15106090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20498981 - 20499087
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||| ||| ||||| ||  ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  20498981 atgcagattctgctgatgtggtgaaatgaaggaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatctttttttttacagtgactaaaac 20499080  T
Q  100 cagaatt 106  Q
    | |||||    
T  20499081 cggaatt 20499087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 23806188 - 23806306
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||| ||| |||||||||| || || ||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  23806188 atgcaaattttgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaac 23806287  T
Q  100 cagaattcgctaaaattac 118  Q
    |  |||||||||| |||||    
T  23806288 cgaaattcgctaatattac 23806306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 17850728 - 17850611
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||||||| || || ||| || ||||||||||||||||| ||||||||| |||||||||||||| || |||||| || |||||||| |    
T  17850728 atgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatcttaaattacagagacaaaatctaaatcttttttttatagggactaaaatc 17850629  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  17850628 ggaattcgctaatattac 17850611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 26236331 - 26236448
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| ||||| || || ||| |||||||| |||||||||||||||||||||||||||||||||||| || ||||| ||  ||||||||||    
T  26236331 atgcagattctgcttacgtggtggaatgagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttccaaggactaaaacc 26236430  T
Q  101 agaattcgctaaaattac 118  Q
      |||||||||| |||||    
T  26236431 gaaattcgctaatattac 26236448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 17463327 - 17463445
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||| || || || || ||| || ||||||||||||||| || ||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  17463327 atgcagattctgcttacatggtggaatgagggatcaaaagtggaagaatatgcaattacagggacaaaatctaaatctttttttttacagggactaaaac 17463426  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  17463427 cggaattcgctaatattac 17463445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 13254626 - 13254521
Alignment:
Q  14 tgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaa 112  Q
    |||||||||||||||||  |||||||||| ||||||||||||||||| ||||||||||||||| |||  |||||||| || |||||||| ||||||||||    
T  13254626 tgacgtgatgaaaggaggaaccaaaagtgaaagaatctgaaattacaaggacaaaatctaaatcttttattttacagggagtaaaaccaaaattcgctaa 13254527  T
Q  113 aattac 118  Q
     |||||    
T  13254526 tattac 13254521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 26560696 - 26560600
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaa 98  Q
    |||||||||||||||||||| || ||  || |||||||||||||||||||||||||||||||||| |||||||||| || ||||||||| ||||||||    
T  26560696 atgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggactaaatctaaatctt-tttttacagggactaaaa 26560600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 23806094 - 23806022
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatcta 73  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||    
T  23806094 atgcggattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctaaaattacaggggcaaaatcta 23806022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 30390601 - 30390483
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaa-attttatttttacagagactaaaac 99  Q
    ||||||||| |||| ||||| || || ||| |||||||||||||||||| ||||||||||||||||||||||||  |||| ||||||||| || |||||     
T  30390601 atgcagattttgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaattttttttttttacagggattaaaat 30390502  T
Q  100 cagaattcgctaaaattac 118  Q
    | ||||||||||| |||||    
T  30390501 cggaattcgctaatattac 30390483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 118
Target Start/End: Complemental strand, 23854797 - 23854712
Alignment:
Q  34 ccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||||  |||||||||| |||||    
T  23854797 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattac 23854712  T

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Target: chr2; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 33290285 - 33290401
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||| |  ||||||| |||||  || |||||||||||||||||| |||||||||| || |||||||| |||||| ||||||||| || |||||||    
T  33290285 atgcagatttttttgacgtggtgaaattagggaccaaaagtggaagaatatgaaattacaaggtcaaaatct-aattttttttttacagggattaaaacc 33290383  T
Q  101 agaattcgctaaaattac 118  Q
    |||||||||||| |||||    
T  33290384 agaattcgctaatattac 33290401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 13254677 - 13254790
Alignment:
Q  6 gattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaaccaga 103  Q
    ||||||||| | ||| ||||| ||| ||||||||||||||||||||||||||||| |||  |||| ||||  |||| |||||||||||||||||||| ||    
T  13254677 gattctgcttatgtggtgaaatgagggaccaaaagtggaagaatctgaaattaca-ggattaaatttaaatcttttttttttacagagactaaaaccgga 13254775  T
Q  104 attcgctaaaattac 118  Q
    ||||||||| |||||    
T  13254776 attcgctaatattac 13254790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 33290191 - 33290073
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttat-ttttacagagactaaaac 99  Q
    |||||||||||||||||||| | |||  || ||||||||||||| || | |||||||||| ||||| |||||||||||| | |||||||| |||||||||    
T  33290191 atgcagattctgctgacgtggttaaataagggaccaaaagtggaggagtatgaaattacaaggacagaatctaaattttttattttacagggactaaaac 33290092  T
Q  100 cagaattcgctaaaattac 118  Q
      ||||||||||| |||||    
T  33290091 tggaattcgctaatattac 33290073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 12418960 - 12419076
Alignment:
Q  2 tgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacca 101  Q
    |||||||||||||||| || | ||| ||| ||| ||||||||| ||||| |||||| || ||||| |||||||| ||| |||||| || ||||||||||     
T  12418960 tgcagattctgctgacatggttaaatgagggactaaaagtggaggaatcggaaatttcatggacagaatctaaactttttttttatagggactaaaaccg 12419059  T
Q  102 gaattcgctaaaattac 118  Q
    ||||||||||| |||||    
T  12419060 gaattcgctaatattac 12419076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 12431020 - 12431136
Alignment:
Q  2 tgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacca 101  Q
    |||||||||||||||| || | ||| ||| ||| ||||||||| ||||| |||||| || ||||| |||||||| ||| |||||| || ||||||||||     
T  12431020 tgcagattctgctgacatggttaaatgagggactaaaagtggaggaatcggaaatttcatggacagaatctaaactttttttttatagggactaaaaccg 12431119  T
Q  102 gaattcgctaaaattac 118  Q
    ||||||||||| |||||    
T  12431120 gaattcgctaatattac 12431136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 26136053 - 26136171
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||||||| |||||||| || ||| || ||||||||||||||| ||||||||||  |||||||||||||  |||| ||||||||| ||||||||    
T  26136053 atgcagattctgcttacgtgatggaacgagagatcaaaagtggaagaatatgaaattacaatgacaaaatctaaatcttttttttttacag-gactaaaa 26136151  T
Q  99 ccagaattcgctaaaattac 118  Q
    ||  |||||| ||| |||||    
T  26136152 ccgaaattcgttaatattac 26136171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 23046813 - 23046739
Alignment:
Q  37 aaagtggaagaatctgaaattacagggacaaaatctaaatt-ttatttttacagagactaaaaccagaattcgct 110  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||| |||||| |||||| |||||||||    
T  23046813 aaagtggaagaatctgaaattacagggacagaatctaaattattttttttatagagaccaaaaccggaattcgct 23046739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 30959943 - 30960025
Alignment:
Q  36 aaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    ||||||||| |||| |||||||||||||||| |||||||| ||| ||||||||  |||||||||| ||||||||||| |||||    
T  30959943 aaaagtggaggaatatgaaattacagggacataatctaaactttttttttacatggactaaaaccggaattcgctaatattac 30960025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 44098894 - 44098968
Alignment:
Q  37 aaagtggaagaatctgaaattacagggacaaaatctaaatt-ttatttttacagagactaaaaccagaattcgct 110  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||  || ||||||||||||||||    
T  44098894 aaagtggaagaatctgaaattacagggacataatctaaattattttttttacaggaaccaaaaccagaattcgct 44098968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 42670851 - 42670748
Alignment:
Q  11 tgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaa---attttatttttacagagactaaaaccagaattc 107  Q
    |||||||||| || ||  || |||||||||||||||||| |||||||||| |||||||||||||    |||| ||||||||| |||||||||| ||||||    
T  42670851 tgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaattttttttttttttacagggactaaaaccggaattc 42670752  T
Q  108 gcta 111  Q
    ||||    
T  42670751 gcta 42670748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 13284648 - 13284767
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatcta--aattttat----ttttacagagactaaaa 98  Q
    |||||||| ||||||| | ||| ||| ||||||||||||| ||||||||||||||| ||||||||||||   |||||||    |||||||| ||||||||    
T  13284648 agattctgttgacgtggttaaatgagggaccaaaagtggaggaatctgaaattacaaggacaaaatctatttattttattttattttacagggactaaaa 13284747  T
Q  99 ccagaattcgctaaaattac 118  Q
    ||  |||||||||| |||||    
T  13284748 ccgaaattcgctaatattac 13284767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 21482151 - 21482233
Alignment:
Q  36 aaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||||||||||||||| |||| |||||||||||||||||| | | ||||||||  |||||||||  ||||||||||| |||||    
T  21482151 aaaagtggaagaatctaaaatgacagggacaaaatctaaactatttttttacaaggactaaaactggaattcgctaatattac 21482233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 30958794 - 30958708
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||||||||||||||||||| |||| | |||||  ||||||||| ||| ||||||||| ||||||||||  |||||||||| |||||    
T  30958794 gaccaaaagtggaagaatctcaaatgatagggatgaaatctaaactttttttttacagggactaaaaccgaaattcgctaatattac 30958708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39878338 - 39878402
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggac 65  Q
    ||||||||||||||| |||| ||||| ||| ||||||||||| || |||||||||||||||||||    
T  39878338 atgcagattctgctggcgtggtgaaatgagggaccaaaagtgaaaaaatctgaaattacagggac 39878402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13284550 - 13284484
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaa 67  Q
    |||||||||||| || |||| ||||| ||| ||| |||||||||||||| |||||||||||||||||    
T  13284550 atgcagattctgttgtcgtggtgaaatgagggactaaaagtggaagaatatgaaattacagggacaa 13284484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 34548705 - 34548771
Alignment:
Q  45 agaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaattcgcta 111  Q
    |||||||| ||||||| ||||||||||||||| || |||||| |  |||||||| ||||||||||||    
T  34548705 agaatctgtaattacaaggacaaaatctaaatcttttttttatatggactaaaatcagaattcgcta 34548771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 5928337 - 5928393
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttaca 88  Q
    ||||||||||  ||||||||||||| | || ||||||||||||| ||| ||||||||    
T  5928337 gaccaaaagtataagaatctgaaatgatagagacaaaatctaaactttttttttaca 5928393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 21481141 - 21481025
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaacca 101  Q
    |||||||||||||| ||| | ||  ||| ||| |||||||||||||||| |||| |   ||||| |||||||| |||| ||||||||  |||||||||      
T  21481141 gcagattctgctgatgtgtttaattgagagactaaaagtggaagaatctaaaatgatgaggacataatctaaatttttttttttacaaggactaaaactg 21481042  T
Q  102 gaattcgctaaaattac 118  Q
    ||||||| ||| |||||    
T  21481041 gaattcgttaatattac 21481025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 33290275 - 33290231
Alignment:
Q  21 atgaaaggagtgaccaaaagtggaagaatctgaaattacagggac 65  Q
    |||||| ||| ||||||||||||| | ||||||||||||||||||    
T  33290275 atgaaatgagggaccaaaagtggaggtatctgaaattacagggac 33290231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 1548 - 1455
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaa 98  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||    
T  1548 agattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatctaaatcttttttttacagggactaaaa 1455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 1646 - 1760
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||||| ||| |||   ||| ||||||||||||||||||||||||||||| ||||| |||||||   || |||||| || ||||||||||    
T  1646 atgcagattctgctgatgtggtgatgtgagggaccaaaagtggaagaatctgaaattacaaggacataatctaa---ttttttttatagggactaaaacc 1742  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||| ||| |||||    
T  1743 ggaattcgttaatattac 1760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 7435 - 7554
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    ||||||||| || |||| |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||  |||| ||||||||| ||||||||    
T  7435 atgcagattttgttgacttgatgaaaggatagaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaa 7534  T
Q  99 ccagaattcgctaaaattac 118  Q
    || ||||||||||| |||||    
T  7535 ccggaattcgctaatattac 7554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 7337 - 7250
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaaccagaattcgctaaaattac 118  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||  ||||| ||||||||||||||| |||||    
T  7337 gaccgaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaacaccagaattcgctaatattac 7250  T

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Target: scaffold0141 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 8558 - 8670
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||||||| || || ||| |||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| || |||||||||    
T  8558 atgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatctttttttttaaagggactaaaac 8657  T
Q  100 cagaattcgctaa 112  Q
    | |||||||||||    
T  8658 cggaattcgctaa 8670  T

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Target: scaffold0141; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 8465 - 8349
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    ||||||||| || ||||||||||||||||| ||||||||||| |||||||||  ||||| |||||||||||||||| ||| | ||||| | |||||||||    
T  8465 atgcagattttgttgacgtgatgaaaggagagaccaaaagtgaaagaatctg--attactgggacaaaatctaaatctttttatttacggggactaaaac 8368  T
Q  100 cagaattcgctaaaattac 118  Q
    |  |||||||||| |||||    
T  8367 cgaaattcgctaatattac 8349  T

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Target: scaffold0361 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4799 - 4916
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    |||||||||||||| ||||| || || ||| |||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||| || |||||||    
T  4799 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttatttttacagggattaaaacc 4898  T
Q  101 agaattcgctaaaattac 118  Q
     ||||| ||||| |||||    
T  4899 ggaatttgctaatattac 4916  T

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Target: scaffold0361; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4705 - 4586
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    |||||||||||| |||| |||| ||||||| |||||||||| ||||||||| |||||||||||||||||| ||||  |||| ||||||||| ||||||||    
T  4705 atgcagattctgttgacttgataaaaggagggaccaaaagtagaagaatctcaaattacagggacaaaatttaaatcttttttttttacagggactaaaa 4606  T
Q  99 ccagaattcgctaaaattac 118  Q
     | ||||||||||| |||||    
T  4605 tcggaattcgctaatattac 4586  T

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Target: scaffold0361; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 4778 - 4745
Alignment:
Q  32 gaccaaaagtggaagaatctgaaattacagggac 65  Q
    ||||||||||||| ||||||||||||||||||||    
T  4778 gaccaaaagtggaggaatctgaaattacagggac 4745  T

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Target: scaffold0185 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 4010 - 3893
Alignment:
Q  2 tgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaacc 100  Q
    |||||||||||||||| || ||||| ||| |||||| ||||||||||| |||||||||||||||| ||||||||| ||| ||||||||| ||||||||||    
T  4010 tgcagattctgctgacatggtgaaatgagcgaccaacagtggaagaatttgaaattacagggacataatctaaatctttttttttacagggactaaaacc 3911  T
Q  101 agaattcgctaaaattac 118  Q
     ||||||||||| |||||    
T  3910 ggaattcgctaatattac 3893  T

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Target: scaffold0185; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 4105 - 4203
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaa 98  Q
    |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||   ||| ||||||||| ||| ||||||||| || |||||    
T  4105 atgcagattctgctgacgtgatgaaaggagggaccaaaaatgaaagaatctgaaattacaacaacataatctaaatatttttttttacagggattaaaa 4203  T

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Target: scaffold0477 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 4988 - 5101
Alignment:
Q  5 agattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaaccagaa 104  Q
    |||||||||| ||||| || || ||| |||||||||||||||||||| ||||||||||||| |||||||||| || |||||||   ||| |||||| |||    
T  4988 agattctgcttacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggactaaatctaaatattttttttactaggacaaaaaccggaa 5087  T
Q  105 ttcgctaaaattac 118  Q
    |||||||| |||||    
T  5088 ttcgctaatattac 5101  T

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Target: scaffold0881 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 362 - 249
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaa 98  Q
    ||||| |||||||| | ||| || || ||| |||||||||||||||||||||||||||  |||| ||||||||||  |||| ||||||| || |||||||    
T  362 atgcaaattctgcttatgtggtggaatgagggaccaaaagtggaagaatctgaaattatggggagaaaatctaaatcttttttttttacggaaactaaaa 263  T
Q  99 ccagaattcgctaa 112  Q
    ||||||||||||||    
T  262 ccagaattcgctaa 249  T

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Target: scaffold0881; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 455 - 561
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-tttatttttacagagactaaaac 99  Q
    |||||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||  | ||||||||||||| |||  |||||||| || ||||||    
T  455 atgcagattctgctgatgtgattaaaggagataccaaaagtggaataatctgaaattac--gaacaaaatctaaatcttttattttacagggagtaaaac 552  T
Q  100 cagaattcg 108  Q
    | |||||||    
T  553 cggaattcg 561  T

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Target: scaffold0352 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 4807 - 4697
Alignment:
Q  3 gcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-ttttatttttacagagactaaaacca 101  Q
    |||||||||||||||  ||| ||   || ||||||||||||| ||||||||||||||||||||| |||||||| |||| |||||| || |||||||||      
T  4807 gcagattctgctgacaagatcaagcaagggaccaaaagtggaggaatctgaaattacagggacagaatctaaacttttttttttatagggactaaaactg 4708  T
Q  102 gaattcgctaa 112  Q
    |||||||||||    
T  4707 gaattcgctaa 4697  T

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Target: scaffold0352; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 5948 - 6027
Alignment:
Q  35 caaaagtggaagaatctgaaattacagggacaaaatctaaa--ttttatttttacagagactaaaaccagaattcgctaa 112  Q
    |||||||||| ||||||||||||||||||||| ||||||||  |||| ||||||||| |||||||| | |||||||||||    
T  5948 caaaagtggaggaatctgaaattacagggacagaatctaaactttttttttttacagggactaaaatcggaattcgctaa 6027  T

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Target: scaffold0157 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 137 - 255
Alignment:
Q  2 tgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaa---ttttatttttacagagactaaaa 98  Q
    ||||||||||||||||  | | ||| |||  || ||||||||| ||||||||||||| ||||||||||||||||   |||| |||| | || ||||||||    
T  137 tgcagattctgctgacagggttaaacgaggaactaaaagtggaggaatctgaaattatagggacaaaatctaaactttttttttttaatagggactaaaa 236  T
Q  99 ccagaattcgctaaaatta 117  Q
    |  ||||||||||| ||||    
T  237 ctggaattcgctaatatta 255  T

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Target: scaffold0220 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 27625 - 27730
Alignment:
Q  1 atgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttatttttacagagactaaaacc 100  Q
    ||||||||||||||||  |  | ||| ||| |||| ||| ||||||||||||| |||||||||||| |||||||| ||| || ||| |  ||| ||||||    
T  27625 atgcagattctgctgatttctttaaatgagagaccgaaattggaagaatctgatattacagggacataatctaaacttttttcttataaggaccaaaacc 27724  T
Q  101 agaatt 106  Q
    ||||||    
T  27725 agaatt 27730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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