View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13772_high_15 (Length: 302)

Name: NF13772_high_15
Description: NF13772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13772_high_15
NF13772_high_15
[»] chr4 (9 HSPs)
chr4 (142-286)||(28983557-28983701)
chr4 (24-114)||(28983873-28983963)
chr4 (17-99)||(23722848-23722930)
chr4 (29-97)||(26071002-26071070)
chr4 (56-99)||(32951842-32951885)
chr4 (30-97)||(43343104-43343171)
chr4 (57-99)||(27925840-27925882)
chr4 (15-53)||(30543681-30543719)
chr4 (15-97)||(39068637-39068718)
[»] chr7 (7 HSPs)
chr7 (16-97)||(24684938-24685019)
chr7 (17-97)||(10461620-10461700)
chr7 (17-100)||(24954258-24954341)
chr7 (17-99)||(36107069-36107151)
chr7 (17-100)||(33439133-33439216)
chr7 (30-90)||(3935881-3935941)
chr7 (13-90)||(28363151-28363228)
[»] chr6 (5 HSPs)
chr6 (17-100)||(3100547-3100630)
chr6 (14-97)||(24261208-24261291)
chr6 (58-100)||(8769940-8769982)
chr6 (7-97)||(18999900-18999990)
chr6 (57-97)||(23769849-23769889)
[»] chr1 (14 HSPs)
chr1 (17-100)||(51250630-51250713)
chr1 (17-99)||(8059659-8059741)
chr1 (17-100)||(21969370-21969453)
chr1 (17-99)||(50050405-50050487)
chr1 (30-99)||(38036557-38036626)
chr1 (15-97)||(1246892-1246973)
chr1 (27-97)||(26262198-26262268)
chr1 (17-99)||(31199947-31200029)
chr1 (24-97)||(43312721-43312794)
chr1 (17-100)||(14796066-14796149)
chr1 (17-100)||(19584430-19584513)
chr1 (15-97)||(7145515-7145596)
chr1 (15-97)||(32829359-32829440)
chr1 (57-99)||(40710240-40710282)
[»] chr3 (10 HSPs)
chr3 (17-99)||(48432547-48432629)
chr3 (29-97)||(40949047-40949115)
chr3 (29-97)||(44269789-44269857)
chr3 (17-100)||(4773839-4773922)
chr3 (17-100)||(39084740-39084823)
chr3 (21-103)||(15042676-15042757)
chr3 (17-93)||(1672621-1672697)
chr3 (44-99)||(11345804-11345859)
chr3 (15-97)||(52965794-52965875)
chr3 (29-97)||(45222344-45222412)
[»] chr2 (7 HSPs)
chr2 (17-99)||(34899180-34899262)
chr2 (13-97)||(8423899-8423983)
chr2 (17-99)||(30357481-30357563)
chr2 (57-100)||(10789154-10789197)
chr2 (57-100)||(22416459-22416502)
chr2 (15-97)||(36441270-36441351)
chr2 (30-97)||(27451753-27451820)
[»] chr8 (9 HSPs)
chr8 (17-97)||(15004167-15004247)
chr8 (17-97)||(22343002-22343082)
chr8 (17-97)||(22354662-22354742)
chr8 (6-97)||(30233469-30233560)
chr8 (15-90)||(39330537-39330611)
chr8 (24-97)||(41492415-41492488)
chr8 (28-100)||(33365653-33365725)
chr8 (30-90)||(37780863-37780923)
chr8 (17-99)||(31628190-31628272)
[»] chr5 (7 HSPs)
chr5 (28-99)||(29289962-29290033)
chr5 (17-99)||(9889292-9889374)
chr5 (13-97)||(34696288-34696372)
chr5 (14-46)||(34866935-34866967)
chr5 (13-97)||(35667937-35668021)
chr5 (57-100)||(23928492-23928535)
chr5 (13-97)||(26362623-26362706)
[»] scaffold0017 (1 HSPs)
scaffold0017 (29-97)||(28791-28859)
[»] scaffold0001 (1 HSPs)
scaffold0001 (17-99)||(396852-396934)
[»] scaffold0123 (1 HSPs)
scaffold0123 (41-97)||(26396-26452)


Alignment Details
Target: chr4 (Bit Score: 133; Significance: 4e-69; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 142 - 286
Target Start/End: Complemental strand, 28983701 - 28983557
Alignment:
Q  142 caattattacatttaatttggatcatttgcggctgctgcatacttgcaaagtagatgcaacaattctatggttgatatgcacctgcgtagttgggacaaa 241  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  28983701 caattattacatttaatttggatcatttgcgactgctgcatacttgcaaagtagatgcaacaattctatggttgatatgcacctgcgtggttgcgacaaa 28983602  T
Q  242 tgatccaaattcaagtacattttataagatattatgatttaatat 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  28983601 tgatccaaattcaagtacattttataagatattatgatttaatat 28983557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 28983963 - 28983873
Alignment:
Q  24 tggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatcagcctacgtaataca 114  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28983963 tggttattttacctcatctaaatcggagtattttatatgatttgggtcttgggttaggccaaacccaacccaaatcagcctacgtaataca 28983873  T

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Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 23722930 - 23722848
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    |||||| ||| |||||||||| | | ||| |||||||   ||||||||| |||||||||||| ||||||||||||||||||||    
T  23722930 taacgggtggatattttacctaacccaaaccggagtaccctatatggttcgggtcttgggtttggccaaacccaacccaaatc 23722848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 26071070 - 26071002
Alignment:
Q  29 attttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    ||||||||||| | ||| |||||||   |||||||| ||||| ||||||| ||||||||||||||||||    
T  26071070 attttacctcacccaaaccggagtaccctatatggtatgggttttgggtttggccaaacccaacccaaa 26071002  T

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Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 32951842 - 32951885
Alignment:
Q  56 ttatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||    
T  32951842 ttatatggttcgggtcttgggtttggctaaacccaacccaaatc 32951885  T

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Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 43343104 - 43343171
Alignment:
Q  30 ttttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    ||||||| || | ||| |||||||| |||||||||| ||||||||||||  |||||| ||||||||||    
T  43343104 ttttaccacacccaaaccggagtatcttatatggttcgggtcttgggtttagccaaatccaacccaaa 43343171  T

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Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 27925840 - 27925882
Alignment:
Q  57 tatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    ||||||||| |||||||||||| | ||||||||||||||||||    
T  27925840 tatatggttcgggtcttgggtttgaccaaacccaacccaaatc 27925882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 30543719 - 30543681
Alignment:
Q  15 tataacggatggttattttacctcatctaaatcggagta 53  Q
    ||||||||||||||||||||||||||| ||| |||||||    
T  30543719 tataacggatggttattttacctcatccaaaccggagta 30543681  T

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Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 39068637 - 39068718
Alignment:
Q  15 tataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||||| |||||||||||||||| | ||| ||||| |  |||| |||||| ||| ||| ||| ||||||||||||||||||    
T  39068637 tataacgggtggttattttacctcacccaaaccggagaaccttatttggttt-ggttttgagtttggccaaacccaacccaaa 39068718  T

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Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 24685019 - 24684938
Alignment:
Q  16 ataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||||||||||||||||||||| |||||||||||| |  ||| ||||| |||| ||||||| ||||||||||||||||||    
T  24685019 ataacggatggttattttacctcacctaaatcggagtctcctatgtggttcgggttttgggtttggccaaacccaacccaaa 24684938  T

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Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 10461620 - 10461700
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    ||||||||||  ||||||||||| | ||| |||||||   |||||||||||||| ||||||| ||||||||||||||||||    
T  10461620 taacggatggacattttacctcacccaaaccggagtaccctatatggtttgggttttgggtttggccaaacccaacccaaa 10461700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 24954341 - 24954258
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatca 100  Q
    |||||| ||| |||||||||| ||| ||| |||||||  |||||||||| |||||||||||| | |||||||||| ||||||||    
T  24954341 taacgggtggatattttacctaatccaaaccggagtaccttatatggttcgggtcttgggtttgtccaaacccaatccaaatca 24954258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 36107151 - 36107069
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    |||||| ||| |||||||||| | | ||| |||||||   ||||||||| |||||||||||| ||||||||||||||||||||    
T  36107151 taacgggtggatattttacctaacccaaaccggagtaccctatatggttcgggtcttgggtttggccaaacccaacccaaatc 36107069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 33439133 - 33439216
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatca 100  Q
    |||||| ||| |||||||||  | | ||| ||||||||  ||||||||| ||||||| |||| |||||||||||||||||||||    
T  33439133 taacgggtggatattttaccaaacccaaaccggagtatcctatatggttcgggtcttaggtttggccaaacccaacccaaatca 33439216  T

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Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 3935941 - 3935881
Alignment:
Q  30 ttttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaaccca 90  Q
    ||||| |||||| ||| ||||||||  ||||||||| |||||||||||| |||||||||||    
T  3935941 ttttatctcatccaaaccggagtatcctatatggttcgggtcttgggtttggccaaaccca 3935881  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 28363228 - 28363151
Alignment:
Q  13 aatataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaaccca 90  Q
    |||||||||| |||   ||||| |||| | ||| ||||||||  ||||||||| |||||||||||| |||||||||||    
T  28363228 aatataacgggtggacgttttatctcacccaaaccggagtatcctatatggttcgggtcttgggtttggccaaaccca 28363151  T

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Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 3100630 - 3100547
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatca 100  Q
    |||||| ||| |||||||||| ||| ||| |||||||   ||||||||| |||||||||||| |||||||||||||||||||||    
T  3100630 taacgggtggatattttacctaatccaaaccggagtaccctatatggttcgggtcttgggtttggccaaacccaacccaaatca 3100547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 24261291 - 24261208
Alignment:
Q  14 atataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    ||||||| | ||||| |||||||||| | ||| ||||||||| ||| |||||||||| |||||||   ||||||||||||||||    
T  24261291 atataactggtggttgttttacctcacccaaaccggagtattctatgtggtttgggttttgggttttaccaaacccaacccaaa 24261208  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 8769982 - 8769940
Alignment:
Q  58 atatggtttgggtcttgggttaggccaaacccaacccaaatca 100  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  8769982 atatggttcgggtcttgggtttggccaaacccaacccaaatca 8769940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 18999900 - 18999990
Alignment:
Q  7 tccaagaatataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    ||||| |||||||||| |||  ||||||||||| | ||| | ||||| | ||||| ||| || ||||||||| ||||||||||||||||||    
T  18999900 tccaataatataacgggtggacattttacctcacccaaaccagagtactctatatagttcggatcttgggtttggccaaacccaacccaaa 18999990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 23769889 - 23769849
Alignment:
Q  57 tatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||| ||||||||| ||||| ||||||||||||||||||    
T  23769889 tatatgctttgggtctggggttcggccaaacccaacccaaa 23769849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 51250713 - 51250630
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatca 100  Q
    |||||||||  |||||||||| | | |||||||||||   ||||||||| |||||||||||| |||||||||||||||||||||    
T  51250713 taacggatgaatattttacctaacccaaatcggagtaccctatatggttcgggtcttgggtttggccaaacccaacccaaatca 51250630  T

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Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 8059659 - 8059741
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    |||||| ||| |||||||||| | | ||| |||||||   |||||||||||||||||||||| ||||||||||||||||||||    
T  8059659 taacgggtggatattttacctaacccaaaccggagtaccctatatggtttgggtcttgggtttggccaaacccaacccaaatc 8059741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 21969370 - 21969453
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatca 100  Q
    |||||| ||| |||||||||| | | ||| |||||||   ||||||||| |||||||||||| |||||||||||||||||||||    
T  21969370 taacgggtggatattttacctaacccaaaccggagtaccctatatggttcgggtcttgggtttggccaaacccaacccaaatca 21969453  T

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Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 50050405 - 50050487
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    |||||| ||| |||||||||| | | ||| |||| |||  ||||||||| |||||||||||| ||||||||||||||||||||    
T  50050405 taacgggtggatattttacctaacccaaaccggaatatcctatatggttcgggtcttgggtttggccaaacccaacccaaatc 50050487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 38036557 - 38036626
Alignment:
Q  30 ttttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    |||||||||| | ||| || |||||  ||||||||||||||||| |||| ||||||||||||||||||||    
T  38036557 ttttacctcacccaaaccgaagtatcctatatggtttgggtcttaggtttggccaaacccaacccaaatc 38036626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 1246892 - 1246973
Alignment:
Q  15 tataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||||| ||||||||||| |||| ||||| || ||||   ||| |||||||| ||||||||| ||||||||||||||||||    
T  1246892 tataacgggtggttattttatctcacctaaaccgaagtacactatttggtttgg-tcttgggtttggccaaacccaacccaaa 1246973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 26262268 - 26262198
Alignment:
Q  27 ttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    ||||||||||||| | ||| | |||||  |||||||||||| || ||||||| ||||||||||||||||||    
T  26262268 ttattttacctcacccaaaccagagtaccttatatggtttgagttttgggttgggccaaacccaacccaaa 26262198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 31200029 - 31199947
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    |||||| ||| |||||||||| | | ||| |||| ||  |||||||||| |||||||||||| ||| ||||||||||||||||    
T  31200029 taacgggtggatattttacctaacccaaaccggaataccttatatggttcgggtcttgggtttggctaaacccaacccaaatc 31199947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 43312794 - 43312721
Alignment:
Q  24 tggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    ||||||||||||||||   |||||| | || |||||||||||| ||| ||||||| | ||||||||||||||||    
T  43312794 tggttattttacctcactcaaatcgaaatactttatatggtttaggttttgggtttgaccaaacccaacccaaa 43312721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 14796066 - 14796149
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatca 100  Q
    |||||| ||| |||||||||| | | ||| |||||||   ||||| ||| |||||||||||| | |||||||||||||||||||    
T  14796066 taacgggtggatattttacctaacccaaaccggagtaccctatatagttcgggtcttgggtttgaccaaacccaacccaaatca 14796149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 19584513 - 19584430
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatca 100  Q
    |||||| ||| |||||||||| | | ||| |||||||   ||||||||| || ||||||||| | |||||||||||||||||||    
T  19584513 taacgggtggatattttacctaacccaaaccggagtaccctatatggttcggatcttgggtttgaccaaacccaacccaaatca 19584430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 7145596 - 7145515
Alignment:
Q  15 tataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||||| ||||||||||| |||| ||||| || ||||   ||| |||||||| ||||||||| |||||||| |||||||||    
T  7145596 tataacgggtggttattttatctcacctaaaccgaagtacactatttggtttgg-tcttgggtttggccaaactcaacccaaa 7145515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 32829440 - 32829359
Alignment:
Q  15 tataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||||  |||||||||||||||| | ||| |||||||   ||| |||||||| | ||||||| ||||||||||||||||||    
T  32829440 tataacgagtggttattttacctcacccaaaccggagtagcctatttggtttggtt-ttgggtttggccaaacccaacccaaa 32829359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 40710240 - 40710282
Alignment:
Q  57 tatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    ||||||||| ||||||||||||  |||||||||||||||||||    
T  40710240 tatatggttcgggtcttgggtttagccaaacccaacccaaatc 40710282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 48432629 - 48432547
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    |||||| ||| |||||||||| | | ||| ||||||||  ||||||||| |||||||||||| ||||||||||||||||||||    
T  48432629 taacgggtggatattttacctaacccaaaccggagtatcctatatggttcgggtcttgggtttggccaaacccaacccaaatc 48432547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 40949115 - 40949047
Alignment:
Q  29 attttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    ||||||||||| | |||||| |||||  ||||||||||||||||||| || ||||||||||||| ||||    
T  40949115 attttacctcacccaaatcgaagtatcctatatggtttgggtcttggatttggccaaacccaactcaaa 40949047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 44269857 - 44269789
Alignment:
Q  29 attttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||| |||| | ||| |||||||  ||||||||||||||| ||||||| ||||||||||||||||||    
T  44269857 attttatctcacccaaaccggagtaccttatatggtttgggttttgggtttggccaaacccaacccaaa 44269789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 4773922 - 4773839
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatca 100  Q
    |||||| ||| |||||||||| | | ||| |||||||   ||||||||| ||| |||||||| |||||||||||||||||||||    
T  4773922 taacgggtggatattttacctaacccaaaccggagtaccctatatggttcgggccttgggtttggccaaacccaacccaaatca 4773839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 39084823 - 39084740
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatca 100  Q
    |||||| ||| |||||||||| | | ||| |||||||   ||||| ||| |||||||||||| |||||||||||||||||||||    
T  39084823 taacgggtggatattttacctaacccaaaccggagtaccctatatagttagggtcttgggtttggccaaacccaacccaaatca 39084740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 15042676 - 15042757
Alignment:
Q  21 ggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatcagcc 103  Q
    ||||||||||||||||||| | || | | |||||  ||||||| ||||||||||||| |||||||| |||||||||| |||||    
T  15042676 ggatggttattttacctcaccaaactag-agtatcctatatggattgggtcttgggtaaggccaaatccaacccaaaccagcc 15042757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 1672621 - 1672697
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacc 93  Q
    ||||||||||  |||||| |||| | ||| |||||||  ||||||||||||||| |||| || ||||||||||||||    
T  1672621 taacggatggacattttatctcacccaaaccggagtaccttatatggtttgggttttggatttggccaaacccaacc 1672697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 11345804 - 11345859
Alignment:
Q  44 aatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    ||||||||||  ||||||| || |||||||||||| |||||||| |||||||||||    
T  11345804 aatcggagtaccttatatgattcgggtcttgggtttggccaaactcaacccaaatc 11345859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 52965794 - 52965875
Alignment:
Q  15 tataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||| ||| ||| |||||||||||| | |||||||||||   ||| |||||||| | ||||||| ||||||||||||||||||    
T  52965794 tatatcgggtgggtattttacctcacccaaatcggagtaccctatttggtttggtt-ttgggtttggccaaacccaacccaaa 52965875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 45222412 - 45222344
Alignment:
Q  29 attttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    ||||||||||| | ||| ||| |||   ||||||||| |||||||||||| || |||||||||||||||    
T  45222412 attttacctcacccaaaccggggtaccctatatggttcgggtcttgggtttggtcaaacccaacccaaa 45222344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 34899262 - 34899180
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    |||||||||| |||||||||| | | ||| |||||||   ||||| |||||||||||||||| ||||||||||||||||||||    
T  34899262 taacggatggatattttacctaacccaaaccggagtaccctatatagtttgggtcttgggtttggccaaacccaacccaaatc 34899180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 8423899 - 8423983
Alignment:
Q  13 aatataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    ||||||||||||||  ||||||||||| | ||| ||||||| | ||||||||| |||| ||||||| || |||||||||||||||    
T  8423899 aatataacggatggacattttacctcacccaaaccggagtactctatatggttcgggttttgggtttggtcaaacccaacccaaa 8423983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 30357481 - 30357563
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    |||||| ||| |||||||||| | | ||| |||||||   ||||||||| |||||||||||| ||||||||||||||||||||    
T  30357481 taacgggtggatattttacctaacccaaaccggagtaccctatatggttcgggtcttgggtttggccaaacccaacccaaatc 30357563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 100
Target Start/End: Original strand, 10789154 - 10789197
Alignment:
Q  57 tatatggtttgggtcttgggttaggccaaacccaacccaaatca 100  Q
    ||||||||| |||||||||||| |||||||||||||||||||||    
T  10789154 tatatggttcgggtcttgggtttggccaaacccaacccaaatca 10789197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 22416502 - 22416459
Alignment:
Q  57 tatatggtttgggtcttgggttaggccaaacccaacccaaatca 100  Q
    ||||||||| |||||||||||| |||||||||||||||||||||    
T  22416502 tatatggttcgggtcttgggtttggccaaacccaacccaaatca 22416459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 36441351 - 36441270
Alignment:
Q  15 tataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||||| |||||||||||||||| | ||| |||||||  |||| |||||| ||| ||||||| ||||||| ||||||||||    
T  36441351 tataacgggtggttattttacctcacccaaaccggagtaccttatttggttt-ggttttgggtttggccaaatccaacccaaa 36441270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 27451753 - 27451820
Alignment:
Q  30 ttttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||||||| | |||  |||||||  ||||||||| |||||||||||| |||||||||||| |||||    
T  27451753 ttttacctcacccaaactggagtatcctatatggttcgggtcttgggtttggccaaacccaatccaaa 27451820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 15004247 - 15004167
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||| ||| |||||||||||| | ||| |||||||   |||||||||||||| ||||||| ||||||||||||||||||    
T  15004247 taacgggtggatattttacctcacccaaaccggagtaccctatatggtttgggttttgggtttggccaaacccaacccaaa 15004167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 22343002 - 22343082
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||| ||| |||||||||||| | ||| |||||||   |||||||||||||| ||||||| ||||||||||||||||||    
T  22343002 taacgggtggatattttacctcacccaaaccggagtaccctatatggtttgggttttgggtttggccaaacccaacccaaa 22343082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 22354662 - 22354742
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||| ||| |||||||||||| | ||| |||||||   |||||||||||||| ||||||| ||||||||||||||||||    
T  22354662 taacgggtggatattttacctcacccaaaccggagtaccctatatggtttgggttttgggtttggccaaacccaacccaaa 22354742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 30233469 - 30233560
Alignment:
Q  6 gtccaagaatataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||| | ||||||||||| ||||||||||||| || || |||||||   | ||||||| |||||||||||| || |||||||||||||||    
T  30233469 gtccaatagtataacggatgattattttacctcaccttaaccggagtaccctctatggttcgggtcttgggtttggtcaaacccaacccaaa 30233560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 39330611 - 39330537
Alignment:
Q  15 tataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaaccca 90  Q
    |||||| | ||||||||||||||||||||||||||||||   ||| |||||| ||| ||||||| |||||||||||    
T  39330611 tataacaggtggttattttacctcatctaaatcggagtaccctatttggttt-ggttttgggtttggccaaaccca 39330537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 41492488 - 41492415
Alignment:
Q  24 tggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||||||||||||| ||||| |||||||   ||||| ||| |||| ||||||| |||||| |||||||||||    
T  41492488 tggttattttacctcacctaaaccggagtacactatatagttcgggttttgggtttggccaaccccaacccaaa 41492415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 33365653 - 33365725
Alignment:
Q  28 tattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatca 100  Q
    |||||||||| ||| ||| |||||||   ||||||||| |||||||||||| ||||||||| ||| |||||||    
T  33365653 tattttacctaatccaaaccggagtaccctatatggttcgggtcttgggtttggccaaacctaactcaaatca 33365725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 37780923 - 37780863
Alignment:
Q  30 ttttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaaccca 90  Q
    |||||||||| | ||||||||||||  ||||||||| |||||||||||| | |||||||||    
T  37780923 ttttacctcacccaaatcggagtatcctatatggttcgggtcttgggtttgcccaaaccca 37780863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 31628190 - 31628272
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    |||||| ||| |||||||||| | | |||  |||||||  ||||||||| ||||||||||||  || ||||||||||||||||    
T  31628190 taacgggtggatattttacctaacccaaactggagtatcctatatggttcgggtcttgggtttagctaaacccaacccaaatc 31628272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 29289962 - 29290033
Alignment:
Q  28 tattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    ||||||| || | ||||| ||||||| | ||||||||| |||||||||||| ||||||||||||||||||||    
T  29289962 tattttatctaacctaaaccggagtactctatatggttcgggtcttgggtttggccaaacccaacccaaatc 29290033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 9889292 - 9889374
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    |||||| ||| |||||||||| | | ||| |||||||   ||||||||| |||||| ||||| ||||||||||||||||||||    
T  9889292 taacgggtggatattttacctaacccaaaccggagtaccctatatggttcgggtctcgggtttggccaaacccaacccaaatc 9889374  T

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Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 34696372 - 34696288
Alignment:
Q  13 aatataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||||||| |||  ||||||||||| | ||| |||| ||| ||||||||||  |||||| |||| ||||||||||| ||||||    
T  34696372 aatataacgggtggacattttacctcacccaaaccggaatatcttatatggttcaggtcttaggtttggccaaacccagcccaaa 34696288  T

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Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 34866935 - 34866967
Alignment:
Q  14 atataacggatggttattttacctcatctaaat 46  Q
    |||||||||||||||||||||||||||||||||    
T  34866935 atataacggatggttattttacctcatctaaat 34866967  T

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Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 35667937 - 35668021
Alignment:
Q  13 aatataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    |||||||||||||   ||||||||||| | ||| || |||| | ||||||||||||||||||| || || ||||| |||||||||    
T  35667937 aatataacggatgaacattttacctcacccaaaccgcagtactctatatggtttgggtcttggatttggtcaaactcaacccaaa 35668021  T

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Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 100
Target Start/End: Original strand, 23928492 - 23928535
Alignment:
Q  57 tatatggtttgggtcttgggttaggccaaacccaacccaaatca 100  Q
    ||||||||| |||||||||||| | |||||||||||||||||||    
T  23928492 tatatggttcgggtcttgggtttgaccaaacccaacccaaatca 23928535  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 26362706 - 26362623
Alignment:
Q  13 aatataacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    ||||||| ||||||   ||||||| |||| ||| |||||||| |||||||||  ||||||||||||  ||||||||||| |||||    
T  26362706 aatataatggatggactttttaccgcatccaaaccggagtatattatatggtc-gggtcttgggtttagccaaacccaatccaaa 26362623  T

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Target: scaffold0017 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 28791 - 28859
Alignment:
Q  29 attttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    ||||||||||| | |||||| |||||  |||||||||  ||||||||||| ||||||||||||||||||    
T  28791 attttacctcacccaaatcgaagtatcctatatggttcaggtcttgggtttggccaaacccaacccaaa 28859  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 396934 - 396852
Alignment:
Q  17 taacggatggttattttacctcatctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaatc 99  Q
    |||||| ||| |||||||||| | | ||| |||||||   ||||||||| ||||||||||||  |||||||||||||||||||    
T  396934 taacgggtggatattttacctaacccaaaccggagtaccctatatggttcgggtcttgggtttagccaaacccaacccaaatc 396852  T

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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 26452 - 26396
Alignment:
Q  41 ctaaatcggagtattttatatggtttgggtcttgggttaggccaaacccaacccaaa 97  Q
    ||||| ||||||||  | ||||||| |||||||||||| ||||||||||||| ||||    
T  26452 ctaaaccggagtatcctttatggttcgggtcttgggtttggccaaacccaactcaaa 26396  T

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