View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13772_high_7 (Length: 487)
Name: NF13772_high_7
Description: NF13772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13772_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 453; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 18 - 481
Target Start/End: Original strand, 5173458 - 5173922
Alignment:
| Q |
18 |
tctttgatctctgctacccatcttccggacggcctttgacgaactcctacaaacctgtggtgacctcttgatgatttctttcggctacggattccattat |
117 |
Q |
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| T |
5173458 |
tctttgatctctgctacccatcttccggacggcctttgacgaactcctacaaacctgtggtgacctcttgatgatttctttcggctacggattccattat |
5173557 |
T |
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| Q |
118 |
cagttgcttgtgctaccatgtttgcaaattccgggttattgagttagatttctaatgataaaaatagatttgatgtctcaattgtgtcactaaattt-gg |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
5173558 |
cagttgcttgtgctaccatgtttgcaaattccgggttattgagttagatttctaatgataaaaatagatttgatgtctcaattgtgtcactaaattttgg |
5173657 |
T |
|
| Q |
217 |
atgacgaaccttttgaacttcaattgtagatcatttataaacttaaatttgaaagcagcatttttagctataggataatgacaagtaacaacatgtcaaa |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5173658 |
atgacgaaccttttgaacttcaattgtagatcatttataaacttaaatttgaaagcagcatttttagctataggataatgacaagtaacaacatgtcaaa |
5173757 |
T |
|
| Q |
317 |
agcctatgcacataattatttatcgttgtaaatcggatatccttcacgtgcaactatatagactaatccctcgagttaaatagagtcacgagggtgatac |
416 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5173758 |
agcctatgcacataattatttatcgttgtaaatcggatatccttcacgtgcaactatatagactaatccctcgagttaaatagagtcacgagggtgatac |
5173857 |
T |
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| Q |
417 |
aactctccattaagagttttaacgctgctgcattctcagagctggattgaaacctaggtcctatg |
481 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
5173858 |
aactctccattaagagttttaacgctgctgcattctcagagctggattgaaacctaggacctatg |
5173922 |
T |
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