View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13773_low_26 (Length: 236)

Name: NF13773_low_26
Description: NF13773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13773_low_26
NF13773_low_26
[»] chr8 (41 HSPs)
chr8 (1-100)||(31038366-31038465)
chr8 (135-186)||(18567412-18567462)
chr8 (135-186)||(8284564-8284614)
chr8 (136-183)||(10129238-10129284)
chr8 (136-183)||(27874678-27874724)
chr8 (136-183)||(28014855-28014901)
chr8 (140-186)||(13327942-13327987)
chr8 (139-189)||(22838354-22838403)
chr8 (135-183)||(1203736-1203783)
chr8 (139-183)||(13496709-13496752)
chr8 (139-183)||(38212944-38212987)
chr8 (136-183)||(3306052-3306098)
chr8 (136-183)||(6818152-6818198)
chr8 (136-183)||(7140456-7140502)
chr8 (136-183)||(9801803-9801849)
chr8 (136-183)||(14961660-14961706)
chr8 (136-183)||(26682203-26682249)
chr8 (136-183)||(31812248-31812294)
chr8 (137-183)||(2161522-2161567)
chr8 (137-183)||(5573421-5573466)
chr8 (137-183)||(39024855-39024900)
chr8 (139-181)||(40225987-40226028)
chr8 (138-183)||(12189587-12189631)
chr8 (138-183)||(12434015-12434059)
chr8 (134-183)||(35678270-35678318)
chr8 (138-183)||(39701802-39701846)
chr8 (135-183)||(45006104-45006151)
chr8 (136-183)||(9580106-9580152)
chr8 (136-183)||(26363987-26364033)
chr8 (152-183)||(36967082-36967113)
chr8 (136-183)||(38843839-38843885)
chr8 (133-183)||(7978013-7978062)
chr8 (137-183)||(14816124-14816169)
chr8 (137-183)||(14829571-14829616)
chr8 (134-183)||(16445731-16445779)
chr8 (134-183)||(19343831-19343879)
chr8 (139-184)||(31263033-31263077)
chr8 (155-183)||(297230-297258)
chr8 (137-173)||(15198898-15198933)
chr8 (154-186)||(40210835-40210867)
chr8 (136-176)||(43717549-43717588)
[»] chr7 (35 HSPs)
chr7 (136-186)||(9332093-9332142)
chr7 (134-183)||(4969908-4969956)
chr7 (137-189)||(820539-820590)
chr7 (137-183)||(3561876-3561921)
chr7 (141-187)||(18102232-18102277)
chr7 (137-183)||(39757108-39757153)
chr7 (131-183)||(19889475-19889526)
chr7 (135-183)||(24462951-24462998)
chr7 (139-183)||(25709399-25709442)
chr7 (138-186)||(36548459-36548506)
chr7 (136-183)||(7040249-7040295)
chr7 (136-183)||(7170137-7170183)
chr7 (136-183)||(32117949-32117995)
chr7 (136-183)||(46290145-46290191)
chr7 (137-183)||(33343123-33343168)
chr7 (137-183)||(34270396-34270441)
chr7 (139-183)||(384431-384473)
chr7 (138-183)||(8091311-8091355)
chr7 (139-184)||(8595031-8595075)
chr7 (134-183)||(12650955-12651004)
chr7 (136-184)||(12085928-12085975)
chr7 (139-183)||(29398134-29398177)
chr7 (139-183)||(29692540-29692583)
chr7 (139-183)||(45501594-45501637)
chr7 (140-183)||(5833490-5833532)
chr7 (140-183)||(26050462-26050504)
chr7 (140-183)||(26059821-26059863)
chr7 (137-183)||(5909280-5909325)
chr7 (137-183)||(23982753-23982798)
chr7 (141-183)||(26037228-26037269)
chr7 (137-183)||(33072116-33072161)
chr7 (137-183)||(47457459-47457504)
chr7 (138-179)||(22041725-22041765)
chr7 (134-183)||(42750418-42750466)
chr7 (139-183)||(22334021-22334064)
[»] chr1 (32 HSPs)
chr1 (134-183)||(6180321-6180369)
chr1 (136-183)||(30172014-30172060)
chr1 (136-183)||(30187555-30187601)
chr1 (136-183)||(35512860-35512906)
chr1 (137-183)||(313884-313929)
chr1 (137-183)||(6569983-6570028)
chr1 (137-183)||(34802102-34802147)
chr1 (134-183)||(5875210-5875258)
chr1 (135-179)||(25465297-25465340)
chr1 (135-183)||(39310782-39310829)
chr1 (136-183)||(6307637-6307683)
chr1 (136-183)||(23576411-23576457)
chr1 (136-183)||(39150324-39150370)
chr1 (136-183)||(51382449-51382495)
chr1 (137-183)||(1502718-1502763)
chr1 (137-183)||(6754606-6754651)
chr1 (137-183)||(36490914-36490959)
chr1 (137-179)||(38812879-38812920)
chr1 (138-183)||(13322011-13322055)
chr1 (138-183)||(30288863-30288907)
chr1 (135-183)||(41624964-41625011)
chr1 (136-183)||(3168065-3168111)
chr1 (136-183)||(17919588-17919634)
chr1 (136-183)||(22167470-22167516)
chr1 (140-183)||(35438850-35438892)
chr1 (136-183)||(44918159-44918205)
chr1 (138-180)||(5879102-5879143)
chr1 (138-183)||(10896488-10896532)
chr1 (139-176)||(23591840-23591876)
chr1 (151-183)||(8062339-8062371)
chr1 (140-176)||(41676561-41676596)
chr1 (139-183)||(51920431-51920474)
[»] chr4 (34 HSPs)
chr4 (135-183)||(27362526-27362573)
chr4 (138-186)||(29190815-29190862)
chr4 (136-183)||(18882264-18882310)
chr4 (136-183)||(54495634-54495680)
chr4 (137-183)||(35999945-35999990)
chr4 (134-183)||(3085805-3085853)
chr4 (137-186)||(49228786-49228834)
chr4 (139-183)||(47326892-47326935)
chr4 (139-183)||(47341688-47341731)
chr4 (140-183)||(16667385-16667427)
chr4 (136-183)||(19468329-19468375)
chr4 (139-186)||(53961454-53961500)
chr4 (139-181)||(4779436-4779477)
chr4 (137-183)||(17409959-17410004)
chr4 (137-183)||(19450898-19450943)
chr4 (142-183)||(24684972-24685012)
chr4 (139-183)||(23545611-23545654)
chr4 (136-183)||(23051379-23051425)
chr4 (140-183)||(23553705-23553747)
chr4 (136-183)||(27019395-27019441)
chr4 (136-183)||(39876965-39877011)
chr4 (136-183)||(40049693-40049739)
chr4 (136-183)||(50352437-50352483)
chr4 (140-183)||(52391433-52391475)
chr4 (136-183)||(53376405-53376451)
chr4 (137-183)||(4329729-4329774)
chr4 (137-183)||(9759140-9759185)
chr4 (133-183)||(23438290-23438339)
chr4 (137-183)||(33632201-33632246)
chr4 (137-183)||(34941413-34941458)
chr4 (136-182)||(42479889-42479934)
chr4 (137-179)||(49181211-49181252)
chr4 (138-179)||(13214415-13214455)
chr4 (139-183)||(46803934-46803977)
[»] chr2 (34 HSPs)
chr2 (135-183)||(6109524-6109571)
chr2 (136-183)||(8065258-8065304)
chr2 (136-183)||(16126556-16126602)
chr2 (136-183)||(12016801-12016847)
chr2 (136-183)||(24729574-24729620)
chr2 (136-183)||(27665041-27665087)
chr2 (136-183)||(38248417-38248463)
chr2 (136-179)||(43388478-43388520)
chr2 (139-181)||(5853463-5853504)
chr2 (137-183)||(9747452-9747497)
chr2 (140-186)||(16123410-16123455)
chr2 (139-181)||(16493532-16493573)
chr2 (141-183)||(19228560-19228601)
chr2 (141-183)||(26003348-26003389)
chr2 (134-183)||(15411617-15411665)
chr2 (135-183)||(7757782-7757829)
chr2 (139-179)||(11660894-11660933)
chr2 (139-183)||(15231966-15232009)
chr2 (139-183)||(20566017-20566060)
chr2 (135-179)||(25295849-25295892)
chr2 (136-176)||(29157826-29157865)
chr2 (136-183)||(4821411-4821457)
chr2 (136-183)||(5583555-5583601)
chr2 (152-183)||(8770898-8770929)
chr2 (136-183)||(9450392-9450438)
chr2 (135-182)||(34817881-34817927)
chr2 (139-181)||(22704674-22704715)
chr2 (136-182)||(29142210-29142255)
chr2 (151-180)||(15749211-15749240)
chr2 (155-183)||(13351226-13351254)
chr2 (135-183)||(17265539-17265586)
chr2 (139-183)||(23932700-23932743)
chr2 (135-183)||(35729252-35729299)
chr2 (139-179)||(45062337-45062376)
[»] scaffold0111 (1 HSPs)
scaffold0111 (136-183)||(37111-37157)
[»] chr5 (17 HSPs)
chr5 (136-183)||(3398355-3398401)
chr5 (136-183)||(4047547-4047593)
chr5 (137-183)||(2795658-2795703)
chr5 (134-183)||(11636866-11636914)
chr5 (135-183)||(8103576-8103623)
chr5 (139-187)||(12641993-12642040)
chr5 (140-183)||(28630013-28630056)
chr5 (136-183)||(30839916-30839962)
chr5 (139-186)||(31365950-31365996)
chr5 (136-183)||(36597714-36597760)
chr5 (141-183)||(30893764-30893805)
chr5 (135-183)||(6863691-6863738)
chr5 (139-183)||(32019984-32020027)
chr5 (152-183)||(41350337-41350368)
chr5 (139-183)||(23995416-23995459)
chr5 (140-180)||(29855898-29855937)
chr5 (139-183)||(40980508-40980551)
[»] chr3 (29 HSPs)
chr3 (136-183)||(23523081-23523127)
chr3 (136-183)||(38389582-38389628)
chr3 (136-183)||(50204538-50204584)
chr3 (137-183)||(3863464-3863509)
chr3 (135-180)||(51618185-51618229)
chr3 (139-183)||(40930186-40930229)
chr3 (136-183)||(2571403-2571449)
chr3 (140-183)||(8165781-8165823)
chr3 (136-183)||(10307901-10307947)
chr3 (136-183)||(11611111-11611157)
chr3 (136-183)||(16875022-16875068)
chr3 (128-187)||(32553497-32553555)
chr3 (137-183)||(29686455-29686500)
chr3 (139-181)||(33474473-33474514)
chr3 (135-189)||(42180181-42180234)
chr3 (133-183)||(51401575-51401624)
chr3 (139-183)||(20938192-20938235)
chr3 (140-183)||(40497182-40497224)
chr3 (136-183)||(45983641-45983687)
chr3 (140-182)||(31318777-31318818)
chr3 (154-183)||(23803060-23803089)
chr3 (138-183)||(36426408-36426452)
chr3 (139-183)||(36812393-36812435)
chr3 (134-183)||(41151768-41151816)
chr3 (143-183)||(11611049-11611088)
chr3 (139-183)||(13495429-13495472)
chr3 (135-179)||(25633137-25633180)
chr3 (139-179)||(35414809-35414848)
chr3 (135-183)||(37055362-37055409)
[»] scaffold0061 (1 HSPs)
scaffold0061 (137-183)||(52777-52822)
[»] scaffold0017 (1 HSPs)
scaffold0017 (137-183)||(145812-145857)
[»] chr6 (29 HSPs)
chr6 (137-183)||(34692489-34692534)
chr6 (138-183)||(29863301-29863345)
chr6 (139-183)||(10887164-10887207)
chr6 (135-183)||(28943765-28943812)
chr6 (136-183)||(13391810-13391856)
chr6 (136-183)||(17552584-17552630)
chr6 (139-190)||(24979149-24979199)
chr6 (137-183)||(2830679-2830724)
chr6 (137-183)||(3853078-3853123)
chr6 (137-183)||(14228124-14228169)
chr6 (137-183)||(18332686-18332731)
chr6 (140-186)||(31069583-31069628)
chr6 (133-183)||(32614938-32614987)
chr6 (134-183)||(3261213-3261261)
chr6 (138-183)||(31568244-31568288)
chr6 (135-183)||(6016991-6017038)
chr6 (143-183)||(20979107-20979146)
chr6 (139-183)||(27819627-27819670)
chr6 (137-183)||(17596476-17596521)
chr6 (136-181)||(8467790-8467834)
chr6 (138-183)||(29065424-29065468)
chr6 (138-183)||(29120277-29120321)
chr6 (139-180)||(30591163-30591203)
chr6 (134-183)||(33017859-33017907)
chr6 (139-183)||(4371974-4372017)
chr6 (138-174)||(28470001-28470036)
chr6 (139-183)||(29074438-29074481)
chr6 (139-183)||(29079202-29079245)
chr6 (139-183)||(29107011-29107054)
[»] scaffold0011 (1 HSPs)
scaffold0011 (138-183)||(13220-13264)
[»] scaffold0073 (1 HSPs)
scaffold0073 (136-183)||(16532-16578)
[»] scaffold0192 (1 HSPs)
scaffold0192 (152-186)||(13575-13609)
[»] scaffold0727 (1 HSPs)
scaffold0727 (140-183)||(5826-5868)
[»] scaffold0136 (1 HSPs)
scaffold0136 (152-183)||(1455-1486)
[»] scaffold0018 (1 HSPs)
scaffold0018 (136-183)||(182177-182223)
[»] scaffold0155 (1 HSPs)
scaffold0155 (137-183)||(3411-3456)
[»] scaffold0128 (1 HSPs)
scaffold0128 (138-183)||(44293-44337)
[»] scaffold0036 (1 HSPs)
scaffold0036 (139-180)||(94018-94058)


Alignment Details
Target: chr8 (Bit Score: 96; Significance: 3e-47; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 31038366 - 31038465
Alignment:
Q  1 attgacgatgaagattgttatgatttgtgtacttctcctttggtagaaatttgtactaattatcaatgtatatgtctgaaacgtttctaattaagttaaa 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31038366 attgaagatgaagattgttatgatttgtgtacttctcctttggtagaaatttgtactaattatcaatgtatatgtctgaaacgtttctaattaagttaaa 31038465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 18567412 - 18567462
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaatta 186  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18567412 tagggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaatta 18567462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 8284564 - 8284614
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaatta 186  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  8284564 tagggtttttctatcat-gtgcaaatttgtacatgttaagaagtttaaatta 8284614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 10129284 - 10129238
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10129284 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 10129238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 27874678 - 27874724
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  27874678 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 27874724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 28014855 - 28014901
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  28014855 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 28014901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 13327942 - 13327987
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagtttaaatta 186  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  13327942 tttttctatcat-gtgcaaatttgcacatgttaagaagtttaaatta 13327987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 22838403 - 22838354
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaattaaaa 189  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  22838403 gtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaaataaaa 22838354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 1203783 - 1203736
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  1203783 tagggtttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 1203736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 13496709 - 13496752
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  13496709 gtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 13496752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 38212944 - 38212987
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  38212944 gtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 38212987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 3306052 - 3306098
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  3306052 agggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 3306098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 6818198 - 6818152
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  6818198 agggtttttctatcat-gtgcaaatttgtacatgttaagaagtttaaa 6818152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 7140456 - 7140502
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  7140456 agggtttttctatcat-gtgcaaatttgcacatattaagaagtttaaa 7140502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 9801849 - 9801803
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||    
T  9801849 agggtttttcaatcat-gtgcaaatttgcacatgttaagaagtttaaa 9801803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 14961660 - 14961706
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  14961660 agggtttttctatcat-gtgcaaatttgcacatgctaagaagtttaaa 14961706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 26682249 - 26682203
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  26682249 agggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 26682203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 31812294 - 31812248
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  31812294 agggtttttctatcat-gtgcaaatttgcacatattaagaagtttaaa 31812248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 2161567 - 2161522
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  2161567 gggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 2161522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 5573466 - 5573421
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  5573466 gggtttttctatcat-gtgcaaatttgtacatgttaagaagtttaaa 5573421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 39024855 - 39024900
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  39024855 gggtttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 39024900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 40225987 - 40226028
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagttta 181  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  40225987 gtttttctatcat-gtgcaaatttgcacatgttaagaagttta 40226028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 12189587 - 12189631
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||    
T  12189587 ggtttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 12189631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 12434015 - 12434059
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||    
T  12434015 ggtttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 12434059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 35678270 - 35678318
Alignment:
Q  134 ttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||| |||||| ||||||||||||||||| |||||||||||||    
T  35678270 ttagggtttttttatcat-gtgcaaatttgcacatgataagaagtttaaa 35678318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 39701802 - 39701846
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||    
T  39701802 ggtttttctatcat-gtgcaaatttgcacatgttaacaagtttaaa 39701846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 45006151 - 45006104
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||    
T  45006151 tagggtttttctatcataa-gcaaatttgcacatgttaagaagtttaaa 45006104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 9580106 - 9580152
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||| |||||| |||||||||| ||||||||||||||||||||    
T  9580106 agggtttttttatcat-gtgcaaatttacacatgttaagaagtttaaa 9580152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 26363987 - 26364033
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  26363987 agggtttttctatcat-gtgcaaatttgcgcatgttaagaaatttaaa 26364033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 183
Target Start/End: Original strand, 36967082 - 36967113
Alignment:
Q  152 tgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||||||||||||||||||    
T  36967082 tgtgcaaatttgcacatgttaagaagtttaaa 36967113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 38843885 - 38843839
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||||||    
T  38843885 agggtttttctatcat-gtgtaaatttgcacatgctaagaagtttaaa 38843839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 7978062 - 7978013
Alignment:
Q  133 tttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||||||  |||||||||||| ||||||| |||||||||    
T  7978062 tttagggtttttctatcata-tgcaaatttgcaaatgttaaaaagtttaaa 7978013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 14816124 - 14816169
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  14816124 gggtttttctatcat-gtgcaaatttgcacatgataagaaatttaaa 14816169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 14829616 - 14829571
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  14829616 gggtttttctatcat-gtgcaaatttgcacatgataagaaatttaaa 14829571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 16445731 - 16445779
Alignment:
Q  134 ttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||| |||||||||| || |||||||||||||||| ||||||||||||||    
T  16445731 ttagagtttttctattat-gtgcaaatttgcacatattaagaagtttaaa 16445779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 19343831 - 19343879
Alignment:
Q  134 ttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||| |||||| ||||||||||||||||||||| | |||||||    
T  19343831 ttagggtttttttatcat-gtgcaaatttgcacatgttaacacgtttaaa 19343879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 31263077 - 31263033
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaat 184  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||    
T  31263077 gtttttctatcata-tgcaaatttgcacatgttaagtagtttaaat 31263033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 183
Target Start/End: Complemental strand, 297258 - 297230
Alignment:
Q  155 gcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||||||||||||||||    
T  297258 gcaaatttgcacatgttaagaagtttaaa 297230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 15198898 - 15198933
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaa 173  Q
    ||||||||||||||| |||||||||||||||||||||    
T  15198898 gggtttttctatcat-gtgcaaatttgcacatgttaa 15198933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 186
Target Start/End: Original strand, 40210835 - 40210867
Alignment:
Q  154 tgcaaatttgcacatgttaagaagtttaaatta 186  Q
    |||||||||||||||||||||| ||||||||||    
T  40210835 tgcaaatttgcacatgttaagacgtttaaatta 40210867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 43717549 - 43717588
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaa 176  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  43717549 agggtttttctatcat-gtgcaaatttacacatgttaagaa 43717588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 9332142 - 9332093
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaatta 186  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9332142 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaatta 9332093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 4969956 - 4969908
Alignment:
Q  134 ttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4969956 ttagggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 4969908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 820539 - 820590
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaattaaaa 189  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  820539 gggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaaataaaa 820590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 3561876 - 3561921
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  3561876 gggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 3561921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 18102232 - 18102277
Alignment:
Q  141 ttttctatcattgtgcaaatttgcacatgttaagaagtttaaattaa 187  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  18102232 ttttctatcat-gtgcaaatttgcacatgttaagaagtttaaattaa 18102277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 39757108 - 39757153
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  39757108 gggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 39757153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 19889526 - 19889475
Alignment:
Q  131 agtttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  19889526 agttaagggtttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 19889475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 24462951 - 24462998
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||    
T  24462951 tagggtatttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 24462998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 25709399 - 25709442
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  25709399 gtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 25709442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 36548459 - 36548506
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaatta 186  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  36548459 ggtttttttatcat-gtgcaaatttgcacatgttaagaagtttaaatta 36548506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 7040249 - 7040295
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  7040249 agggtttttatatcat-gtgcaaatttgcacatgttaagaagtttaaa 7040295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 7170183 - 7170137
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  7170183 agggtttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 7170137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 32117995 - 32117949
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  32117995 agggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 32117949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 46290191 - 46290145
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  46290191 agggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 46290145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 33343168 - 33343123
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  33343168 gggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 33343123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 34270441 - 34270396
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  34270441 gggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 34270396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 384431 - 384473
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  384431 gtttttctatcattg--caaatttgcacatgttaagaagtttaaa 384473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 8091311 - 8091355
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||    
T  8091311 ggtttttctatcat-gtgcaaatttacacatgttaagaagtttaaa 8091355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 8595075 - 8595031
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaat 184  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||    
T  8595075 gtttttctatcat-gtgcaaatttacacatgttaagaagtttaaat 8595031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 12651004 - 12650955
Alignment:
Q  134 ttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||| ||||||||||| || |||||||||||||||| ||||||    
T  12651004 ttagggtttttatatcattgtgctaaattgcacatgttaagaaatttaaa 12650955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 12085928 - 12085975
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaat 184  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  12085928 agggtttttctatcat-gtgcaaatttgcacataataagaagtttaaat 12085975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 29398134 - 29398177
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| || ||||||||||||||||||||||||||||    
T  29398134 gtttttctatcat-gttcaaatttgcacatgttaagaagtttaaa 29398177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 29692540 - 29692583
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||    
T  29692540 gtttttctatcat-gtgcaaatttgtacatgttaagaagtttaaa 29692583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 45501637 - 45501594
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||    
T  45501637 gtttttctatcat-gtgcaaatttgcacatcttaagaagtttaaa 45501594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 5833532 - 5833490
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  5833532 tttttctatcat-gtgcaaatttgcacatgttaaaaagtttaaa 5833490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 26050462 - 26050504
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||| |||||||||||||||||||||||| ||||||    
T  26050462 tttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 26050504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 26059821 - 26059863
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||| |||||||||||||||||||||||| ||||||    
T  26059821 tttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 26059863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 5909280 - 5909325
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||||    
T  5909280 gggtttttctatcat-gtgtaaatttgcacatgataagaagtttaaa 5909325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 23982753 - 23982798
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||||||    
T  23982753 gggtttttctatcat-gtgcaaatttgcacacgttaagaaatttaaa 23982798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 26037269 - 26037228
Alignment:
Q  141 ttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  26037269 ttttctatcat-gtgcaaatttgcagatgttaagaagtttaaa 26037228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 33072161 - 33072116
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||||    
T  33072161 gggtttttctatcat-gtgcaaatttgtacatgttaagaaatttaaa 33072116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 47457459 - 47457504
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| ||||||||||||||||||||| || ||||||    
T  47457459 gggtttttctatcat-gtgcaaatttgcacatgttaaaaaatttaaa 47457504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 22041725 - 22041765
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtt 179  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  22041725 ggtttttctatcat-gtgcaaatttgcacttgttaagaagtt 22041765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 42750466 - 42750418
Alignment:
Q  134 ttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||| |||||||||||  |||||||||||| |||||||||||||||||    
T  42750466 ttaggggttttctatcata-tgcaaatttgcatatgttaagaagtttaaa 42750418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 22334021 - 22334064
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||||    
T  22334021 gtttttcaatcat-gtgcaaatttgtacatgttaagaagtttaaa 22334064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 6180369 - 6180321
Alignment:
Q  134 ttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6180369 ttagggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 6180321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 30172060 - 30172014
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  30172060 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 30172014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 30187601 - 30187555
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  30187601 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 30187555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 35512906 - 35512860
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  35512906 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 35512860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 313929 - 313884
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  313929 gggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 313884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 6569983 - 6570028
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  6569983 gggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 6570028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 34802147 - 34802102
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  34802147 gggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 34802102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 5875210 - 5875258
Alignment:
Q  134 ttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  5875210 ttaggatttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 5875258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 25465340 - 25465297
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtt 179  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  25465340 tagggtttttctatcat-gtgcaaatttgcacatgttaagaagtt 25465297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 39310782 - 39310829
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  39310782 tagggtttttctatcat-gtgcaaatttgcacatgttaaaaagtttaaa 39310829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 6307683 - 6307637
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  6307683 agggtttttatatcat-gtgcaaatttgcacatgttaagaagtttaaa 6307637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 23576411 - 23576457
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  23576411 agggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 23576457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 39150324 - 39150370
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  39150324 agggtttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 39150370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 51382495 - 51382449
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  51382495 agggtttttctatcat-gtgcaactttgcacatgttaagaagtttaaa 51382449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 1502718 - 1502763
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  1502718 gggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 1502763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 6754651 - 6754606
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  6754651 gggtttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 6754606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 36490959 - 36490914
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||    
T  36490959 gggtttttctatcat-gagcaaatttgcacatgttaagaagtttaaa 36490914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 38812920 - 38812879
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtt 179  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  38812920 gggtttttctatcat-gtgcaaatttgcacatgttaagaagtt 38812879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 13322055 - 13322011
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||    
T  13322055 ggtttttctatcat-gtgcaaatttgcatatgttaagaagtttaaa 13322011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 30288863 - 30288907
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||    
T  30288863 ggtttttctatcat-gtgcaaatttacacatgttaagaagtttaaa 30288907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 41625011 - 41624964
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||||||    
T  41625011 tagggtttttctatcat-gtgcaaatttgcatatgataagaagtttaaa 41624964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 3168065 - 3168111
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| ||||||||||||||| ||||| |||||||||    
T  3168065 agggtttttctatcat-gtgcaaatttgcacacgttaaaaagtttaaa 3168111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 17919634 - 17919588
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| ||||||||||||||||  |||||||||||||    
T  17919634 agggtttttctatcat-gtgcaaatttgcacataataagaagtttaaa 17919588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 22167516 - 22167470
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  22167516 agggttttcctatcat-gtgcaaatttgcacatgataagaagtttaaa 22167470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 35438892 - 35438850
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||| |||||||||||||||||||||||| ||||||    
T  35438892 tttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 35438850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 44918205 - 44918159
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  44918205 agggtttttctatcat-gtgcaaatttacacatgttaagaaatttaaa 44918159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 5879102 - 5879143
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagttt 180  Q
    |||||||||||||| ||| ||||||||||||||||||||||||    
T  5879102 ggtttttctatcat-gtgtaaatttgcacatgttaagaagttt 5879143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 10896532 - 10896488
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||||    
T  10896532 ggtttttctatcat-gtgtaaaattgcacatgttaagaagtttaaa 10896488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 23591876 - 23591840
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaa 176  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  23591876 gtttttctatcat-gtgcaaatttgcacatgttaagaa 23591840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 8062371 - 8062339
Alignment:
Q  151 ttgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||||||||| |||||||||    
T  8062371 ttgtgcaaatttgcacatgttaaaaagtttaaa 8062339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 41676561 - 41676596
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaa 176  Q
    |||||||||||| ||||||||||||||||||||||||    
T  41676561 tttttctatcat-gtgcaaatttgcacatgttaagaa 41676596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 51920431 - 51920474
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||    
T  51920431 gtttttctatcat-gtgcaaatttgcacatgttaataaatttaaa 51920474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 27362573 - 27362526
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27362573 tagggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 27362526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 29190815 - 29190862
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaatta 186  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29190815 ggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaatta 29190862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 18882264 - 18882310
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  18882264 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 18882310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 54495634 - 54495680
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  54495634 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 54495680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 35999945 - 35999990
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  35999945 gggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 35999990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 3085853 - 3085805
Alignment:
Q  134 ttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  3085853 ttagggtttttctatcat-gtgcaaatttgcacattttaagaagtttaaa 3085805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 49228834 - 49228786
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaatta 186  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  49228834 gggtttttctatcat-gtgcaaatttgcacgtgttaagaagtttaaatta 49228786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 47326892 - 47326935
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  47326892 gtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 47326935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 47341688 - 47341731
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  47341688 gtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 47341731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 16667385 - 16667427
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  16667385 tttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 16667427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 19468375 - 19468329
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||    
T  19468375 agggtttttctattat-gtgcaaatttgcacatgttaagaagtttaaa 19468329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 186
Target Start/End: Complemental strand, 53961500 - 53961454
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaatta 186  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  53961500 gtttttctatcgt-gtgcaaatttgcacatgttaagaagtttaaatta 53961454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 4779436 - 4779477
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagttta 181  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  4779436 gtttttctatcat-gtgcaaatttgcacatgttaagaagttta 4779477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 17410004 - 17409959
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  17410004 gggtttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 17409959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 19450898 - 19450943
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||| || |||||||||||||||||||||||||||||||    
T  19450898 gggtttttctattat-gtgcaaatttgcacatgttaagaagtttaaa 19450943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 24685012 - 24684972
Alignment:
Q  142 tttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  24685012 tttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 24684972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 23545654 - 23545611
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  23545654 gtttttctatcat-gtgcaaatttgcacatgttaataagtttaaa 23545611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 23051379 - 23051425
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  23051379 agggtttttctatcat-gtgcaaatttgcacatgataagaaatttaaa 23051425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 23553747 - 23553705
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  23553747 tttttctatcat-gtgcaaatttgcacatgttaaaaagtttaaa 23553705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 27019441 - 27019395
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  27019441 agggtttttctatcat-gtgcaaatttgcatatgttaaaaagtttaaa 27019395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 39877011 - 39876965
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  39877011 agggtttttctatcat-gtgtaaatttgcacatgttaagaaatttaaa 39876965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 40049739 - 40049693
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| || |||||||||||||||||||||||| ||||||    
T  40049739 agggtttttctattat-gtgcaaatttgcacatgttaagaaatttaaa 40049693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 50352483 - 50352437
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  50352483 agggtttttctatcata-tgcaaatttgcacatgttaagaaatttaaa 50352437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 52391475 - 52391433
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||| ||| |||||||||||||||||||||||||||    
T  52391475 tttttctatcat-gtgtaaatttgcacatgttaagaagtttaaa 52391433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 53376405 - 53376451
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  53376405 agggtttttttatcat-gtgaaaatttgcacatgttaagaagtttaaa 53376451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 4329774 - 4329729
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  4329774 gggtttttctatcat-gtgcaaatttgcatatgttaaaaagtttaaa 4329729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 9759140 - 9759185
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| || ||||||||||||||||||||| ||||||    
T  9759140 gggtttttctatcat-gtacaaatttgcacatgttaagaaatttaaa 9759185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 23438339 - 23438290
Alignment:
Q  133 tttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| || ||||||||||||||||||| |||| ||||||    
T  23438339 tttagggtttttctattat-gtgcaaatttgcacatgttgagaattttaaa 23438290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 33632201 - 33632246
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||||    
T  33632201 gggtttttctatcat-gtgcgaatttgcacatgttaaaaagtttaaa 33632246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 34941458 - 34941413
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||    
T  34941458 gggtttttctatcat-gtgcgaatttgcacatgataagaagtttaaa 34941413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 42479889 - 42479934
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaa 182  Q
    |||| ||||||||||| |||||||||||||||||||||||| |||||    
T  42479889 agggattttctatcat-gtgcaaatttgcacatgttaagaaatttaa 42479934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 49181252 - 49181211
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtt 179  Q
    ||||||||||||||| |||||||||||||| ||||||||||||    
T  49181252 gggtttttctatcat-gtgcaaatttgcacctgttaagaagtt 49181211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 13214415 - 13214455
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtt 179  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  13214415 ggtttttctattat-gtgcaaatttgcacatgttaagaagtt 13214455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 46803977 - 46803934
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||    
T  46803977 gtttttctatcat-gtgcaaatttgcacatattaaaaagtttaaa 46803934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 6109571 - 6109524
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6109571 tagggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 6109524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 8065304 - 8065258
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  8065304 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 8065258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 16126556 - 16126602
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  16126556 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 16126602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 12016847 - 12016801
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  12016847 agggtttttctatcat-gtgcaaatttgcacatattaagaagtttaaa 12016801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 24729574 - 24729620
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  24729574 agggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 24729620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 27665041 - 27665087
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  27665041 agggtttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 27665087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 38248417 - 38248463
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  38248417 agggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 38248463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 43388478 - 43388520
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtt 179  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  43388478 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtt 43388520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 5853463 - 5853504
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagttta 181  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  5853463 gtttttctatcat-gtgcaaatttgcacatgttaagaagttta 5853504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 9747497 - 9747452
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  9747497 gggtttttctatcat-gtgcaaattttcacatgttaagaagtttaaa 9747452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 16123455 - 16123410
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagtttaaatta 186  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||    
T  16123455 tttttctatcat-gtgcaaatttgcacatgataagaagtttaaatta 16123410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 16493532 - 16493573
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagttta 181  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  16493532 gtttttctatcat-gtgcaaatttgcacatgttaagaagttta 16493573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 19228601 - 19228560
Alignment:
Q  141 ttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  19228601 ttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 19228560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 26003348 - 26003389
Alignment:
Q  141 ttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  26003348 ttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 26003389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 15411617 - 15411665
Alignment:
Q  134 ttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  15411617 ttaggggttttctaacat-gtgcaaatttgcacatgttaagaagtttaaa 15411665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 7757782 - 7757829
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  7757782 tagggtttttctatcat-gtgcaaatttacacatgttaagaaatttaaa 7757829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 11660894 - 11660933
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtt 179  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  11660894 gtttttctatcat-gtgcaaatttgcacatgttaagaagtt 11660933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 15232009 - 15231966
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||| || |||||||||||||||||||||||||||||||    
T  15232009 gtttttctattat-gtgcaaatttgcacatgttaagaagtttaaa 15231966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 20566017 - 20566060
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  20566017 gtttttctatcat-gtgcaaatttacacatgttaagaagtttaaa 20566060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 25295849 - 25295892
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtt 179  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||    
T  25295849 tagggtttttctatcatt-tgcaaatttgcacatgttaggaagtt 25295892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 29157826 - 29157865
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaa 176  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  29157826 agggtttttctatcat-gtgcaaatttgcacatgttaagaa 29157865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 4821457 - 4821411
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| || ||||||||||||||||| |||||||||||||    
T  4821457 agggtttttctattat-gtgcaaatttgcacatgataagaagtttaaa 4821411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 5583555 - 5583601
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| | |||||||||||||||||||||| ||||||    
T  5583555 agggtttttctatcat-gcgcaaatttgcacatgttaagaaatttaaa 5583601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 183
Target Start/End: Original strand, 8770898 - 8770929
Alignment:
Q  152 tgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||||||||||||||||||    
T  8770898 tgtgcaaatttgcacatgttaagaagtttaaa 8770929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 9450438 - 9450392
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  9450438 agggtttttctatcat-gtgcaaatctgcacatgttaagaaatttaaa 9450392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 34817927 - 34817881
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaa 182  Q
    ||||||||||||||||| ||||||| || |||||||||||||||||||    
T  34817927 tagggtttttctatcat-gtgcaaacttacacatgttaagaagtttaa 34817881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 22704715 - 22704674
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagttta 181  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  22704715 gtttttctatcat-gtgcaaatttgcacatcttaagaagttta 22704674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 29142255 - 29142210
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaa 182  Q
    |||||||||||||||| |||||||||| |||||||| ||||||||||    
T  29142255 agggtttttctatcat-gtgcaaatttacacatgtttagaagtttaa 29142210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 180
Target Start/End: Original strand, 15749211 - 15749240
Alignment:
Q  151 ttgtgcaaatttgcacatgttaagaagttt 180  Q
    ||||||||||||||||||||||||||||||    
T  15749211 ttgtgcaaatttgcacatgttaagaagttt 15749240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 183
Target Start/End: Original strand, 13351226 - 13351254
Alignment:
Q  155 gcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||||||||||||||||    
T  13351226 gcaaatttgcacatgttaagaagtttaaa 13351254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 17265586 - 17265539
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||| || ||||||||||| ||||||||| ||||||    
T  17265586 tagggtttttctatcat-gtccaaatttgcacttgttaagaaatttaaa 17265539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 23932743 - 23932700
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| ||||||||||||| || ||||||||||||||    
T  23932743 gtttttctatcat-gtgcaaatttgcatatattaagaagtttaaa 23932700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 35729299 - 35729252
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| ||| || |||||||||||||||| |||||||||||    
T  35729299 tagggtttttctaacat-gtacaaatttgcacatgttgagaagtttaaa 35729252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 45062376 - 45062337
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtt 179  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  45062376 gtttttctatcat-gtgcaaatttgcacatattaagaagtt 45062337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 37111 - 37157
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  37111 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 37157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 3398401 - 3398355
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  3398401 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 3398355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 4047593 - 4047547
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  4047593 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 4047547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 2795703 - 2795658
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  2795703 gggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 2795658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 11636914 - 11636866
Alignment:
Q  134 ttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  11636914 ttagggtttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 11636866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 8103576 - 8103623
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  8103576 tagggtttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 8103623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 12641993 - 12642040
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaattaa 187  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||    
T  12641993 gtttttctataat-gtgcaaatttgcacatgttaagaagtttaaattaa 12642040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 28630056 - 28630013
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||| ||||||||||||||||| |||||||||||||    
T  28630056 tttttctatcatcgtgcaaatttgcacatgataagaagtttaaa 28630013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 30839962 - 30839916
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  30839962 agggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 30839916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 186
Target Start/End: Original strand, 31365950 - 31365996
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaatta 186  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  31365950 gtttttctatcat-gtgcaaatttgtacatgttaagaagtttaaatta 31365996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 36597760 - 36597714
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  36597760 agggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 36597714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 30893805 - 30893764
Alignment:
Q  141 ttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  30893805 ttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 30893764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 6863738 - 6863691
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  6863738 tagggtttttctatcat-gtgcaaatttgcacatgttaaaaaatttaaa 6863691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 32019984 - 32020027
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||    
T  32019984 gtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 32020027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 183
Target Start/End: Complemental strand, 41350368 - 41350337
Alignment:
Q  152 tgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||||||||||||||||||    
T  41350368 tgtgcaaatttgcacatgttaagaagtttaaa 41350337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 23995416 - 23995459
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||| || ||||||||||| |||||||||||||||||||    
T  23995416 gtttttctattat-gtgcaaatttgtacatgttaagaagtttaaa 23995459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 29855898 - 29855937
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagttt 180  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  29855898 tttttctatcat-gtgtaaatttgcacatgttaagaagttt 29855937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 40980551 - 40980508
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||    
T  40980551 gtttttctatcat-gtgcaaatttgcacatattaaaaagtttaaa 40980508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 23523127 - 23523081
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  23523127 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 23523081  T

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Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 38389628 - 38389582
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  38389628 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 38389582  T

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Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 50204584 - 50204538
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  50204584 agggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 50204538  T

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Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 3863509 - 3863464
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  3863509 gggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 3863464  T

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Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 51618229 - 51618185
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagttt 180  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  51618229 tagggtttttctatcat-gtgcaaatttgcacatgttaagaagttt 51618185  T

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Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 40930229 - 40930186
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  40930229 gtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 40930186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 2571449 - 2571403
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  2571449 agggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 2571403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 8165823 - 8165781
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  8165823 tttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 8165781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 10307947 - 10307901
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  10307947 agggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 10307901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 11611157 - 11611111
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  11611157 agggtttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 11611111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 16875022 - 16875068
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||    
T  16875022 agggtttttctatcgt-gtgcaaatttgcacatgttaagaagtttaaa 16875068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 32553555 - 32553497
Alignment:
Q  128 ataagtttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaattaa 187  Q
    |||| ||| ||||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  32553555 ataatttttgggtttttctatcat-gtgtaaatttacacatgttaagaagtttaaattaa 32553497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 29686500 - 29686455
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  29686500 gggtttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 29686455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 33474473 - 33474514
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagttta 181  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  33474473 gtttttctatcat-gtgcaaatttgcacatgttaagaagttta 33474514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 42180234 - 42180181
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaattaaaa 189  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  42180234 taggatttttctatcat-gtgtaaatttgcacatgttaagaagtttaaaataaaa 42180181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 51401624 - 51401575
Alignment:
Q  133 tttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| || || ||||||||||||||||||||||||||||    
T  51401624 tttagggtttttctattat-gtacaaatttgcacatgttaagaagtttaaa 51401575  T

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Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 20938235 - 20938192
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||    
T  20938235 gtttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 20938192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 40497224 - 40497182
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||| ||||||||||||||||| |||||||||||||    
T  40497224 tttttctatcat-gtgcaaatttgcacatgataagaagtttaaa 40497182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 45983687 - 45983641
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||| |||||| ||||||||||||||| |||||||||||||||    
T  45983687 agggtttttttatcat-gtgcaaatttgcacaggttaagaagtttaaa 45983641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 31318818 - 31318777
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagtttaa 182  Q
    |||||||||||| ||| ||||||||||||||||||||||||||    
T  31318818 tttttctatcat-gtgaaaatttgcacatgttaagaagtttaa 31318777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 183
Target Start/End: Original strand, 23803060 - 23803089
Alignment:
Q  154 tgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||||||||||||||||    
T  23803060 tgcaaatttgcacatgttaagaagtttaaa 23803089  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 36426408 - 36426452
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||    
T  36426408 ggtttttctatcat-gtgtaaatttacacatgttaagaagtttaaa 36426452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 36812435 - 36812393
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||| ||||  |||||||||||||||||||||||||||    
T  36812435 gtttttctatccttgt--aaatttgcacatgttaagaagtttaaa 36812393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 41151816 - 41151768
Alignment:
Q  134 ttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||| |||||||||||| |||||||||| |||||| |||||||||||||    
T  41151816 ttaggatttttctatcat-gtgcaaatttacacatgataagaagtttaaa 41151768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 11611088 - 11611049
Alignment:
Q  143 ttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  11611088 ttctatcat-gtgcaaatttgcacatgataagaagtttaaa 11611049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 13495472 - 13495429
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||    
T  13495472 gtttttctatcat-gtgaaaatttgcacatgataagaagtttaaa 13495429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 25633180 - 25633137
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtt 179  Q
    ||||||||||||||||| ||||||||||| || ||||||||||||    
T  25633180 tagggtttttctatcat-gtgcaaatttgaacttgttaagaagtt 25633137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 35414809 - 35414848
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtt 179  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  35414809 gtttttctatcat-gtgcaaatttacacatgttaagaagtt 35414848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 37055362 - 37055409
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||| |||||||||||| ||| |||||||||||| ||||||||||||||    
T  37055362 taggatttttctatcat-gtgaaaatttgcacatattaagaagtttaaa 37055409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 52777 - 52822
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  52777 gggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 52822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 145857 - 145812
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  145857 gggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 145812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 34692534 - 34692489
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  34692534 gggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 34692489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 29863301 - 29863345
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  29863301 ggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 29863345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 10887207 - 10887164
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  10887207 gtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 10887164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 28943765 - 28943812
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  28943765 tagggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 28943812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 13391856 - 13391810
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  13391856 agggtttttctatcat-gtgcaaatttgcgcatgttaagaagtttaaa 13391810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 17552584 - 17552630
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  17552584 agggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 17552630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 24979149 - 24979199
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaattaaaat 190  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  24979149 gtttttctatcat-gtgcaaatttgcacatgttaagatgtttaaaataaaat 24979199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 2830679 - 2830724
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||    
T  2830679 gggtttttctatcat-gtacaaatttgcacatgttaagaagtttaaa 2830724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 3853123 - 3853078
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  3853123 gggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 3853078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 14228124 - 14228169
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  14228124 gggtttttctatcat-gtgcaaatttgcacatgttaagaaatttaaa 14228169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 18332686 - 18332731
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  18332686 gggtttttctatcat-gtgcaaattttcacatgttaagaagtttaaa 18332731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 31069583 - 31069628
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagtttaaatta 186  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||    
T  31069583 tttttctatcat-gtgcaaatttacacatgttaagaagtttaaatta 31069628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 32614938 - 32614987
Alignment:
Q  133 tttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  32614938 tttaaggtttttctatcat-gtacaaatttgcacatgttaagaagtttaaa 32614987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 3261261 - 3261213
Alignment:
Q  134 ttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  3261261 ttagggtttttctatcat-gtgcaaatttacacatgttaaaaagtttaaa 3261213  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 31568288 - 31568244
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||    
T  31568288 ggtttttctatcat-gtgcaaatttgcacatgttaaaaagtttaaa 31568244  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 6017038 - 6016991
Alignment:
Q  135 tagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  6017038 taggatttttctatcat-gtgcaaatttgcacatgttaaaaagtttaaa 6016991  T

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Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 20979146 - 20979107
Alignment:
Q  143 ttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  20979146 ttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 20979107  T

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Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 27819627 - 27819670
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| || ||||||||||||||||||||||||||||    
T  27819627 gtttttctatcat-gtacaaatttgcacatgttaagaagtttaaa 27819670  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 17596521 - 17596476
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  17596521 gggtttttctatcat-gtgcaaatttgtacatgataagaagtttaaa 17596476  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 8467834 - 8467790
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagttta 181  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||    
T  8467834 agggtttttctatcata-tgcaaatttgtacatgttaagaagttta 8467790  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 29065424 - 29065468
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||||    
T  29065424 ggtttttctatcat-gtgcaaacttgcacatgttaaaaagtttaaa 29065468  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 29120277 - 29120321
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||||    
T  29120277 ggtttttctatcat-gtgcaaacttgcacatgttaaaaagtttaaa 29120321  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 30591163 - 30591203
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagttt 180  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  30591163 gtttttctatcat-gtgcaaatttacacatgttaagaagttt 30591203  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 33017907 - 33017859
Alignment:
Q  134 ttagggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| || ||||||||||||||||||||| || ||||||    
T  33017907 ttagggtttttctattat-gtgcaaatttgcacatgttaaaaaatttaaa 33017859  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 4372017 - 4371974
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||    
T  4372017 gtttttctatcat-gcgcaaatttacacatgttaagaagtttaaa 4371974  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 28470036 - 28470001
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaag 174  Q
    |||||||||||||| ||||||||||||||||||||||    
T  28470036 ggtttttctatcat-gtgcaaatttgcacatgttaag 28470001  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 29074438 - 29074481
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  29074438 gtttttctatcat-gtgcaaacttgcacatgttaaaaagtttaaa 29074481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 29079202 - 29079245
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  29079202 gtttttctatcat-gtgcaaacttgcacatgttaaaaagtttaaa 29079245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 29107011 - 29107054
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  29107011 gtttttctatcat-gtgcaaacttgcacatgttaaaaagtttaaa 29107054  T

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Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 13264 - 13220
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  13264 ggtttttctatcat-gtgcaaatttgcacatgttaagaagtttaaa 13220  T

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Target: scaffold0073 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 16532 - 16578
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  16532 agggtttttatatcat-gtgcaaatttgcacatgttaagaagtttaaa 16578  T

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Target: scaffold0192 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 186
Target Start/End: Original strand, 13575 - 13609
Alignment:
Q  152 tgtgcaaatttgcacatgttaagaagtttaaatta 186  Q
    |||||||||||||||||||||||||||||||||||    
T  13575 tgtgcaaatttgcacatgttaagaagtttaaatta 13609  T

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Target: scaffold0727 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 5868 - 5826
Alignment:
Q  140 tttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  5868 tttttctatcat-gtgcaaatttgcacatgttaaaaagtttaaa 5826  T

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Target: scaffold0136 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 183
Target Start/End: Original strand, 1455 - 1486
Alignment:
Q  152 tgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||||||||||||||||||||    
T  1455 tgtgcaaatttgcacatgttaagaagtttaaa 1486  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 182223 - 182177
Alignment:
Q  136 agggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||    
T  182223 agggtttttctatcat-gtgtaaatttgtacatgttaagaagtttaaa 182177  T

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Target: scaffold0155 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 3411 - 3456
Alignment:
Q  137 gggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  3411 gggtttttctatcat-gtgtaaatttgcacatattaagaagtttaaa 3456  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 44293 - 44337
Alignment:
Q  138 ggtttttctatcattgtgcaaatttgcacatgttaagaagtttaaa 183  Q
    |||||||||||||| |||||||||||||||| |||| |||||||||    
T  44293 ggtttttctatcat-gtgcaaatttgcacatattaaaaagtttaaa 44337  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 94018 - 94058
Alignment:
Q  139 gtttttctatcattgtgcaaatttgcacatgttaagaagttt 180  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  94018 gtttttctatcat-gtgcaaatttgcatatgttaagaagttt 94058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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