View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13774_low_1 (Length: 823)
Name: NF13774_low_1
Description: NF13774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13774_low_1 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 776; Significance: 0; HSPs: 32)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 776; E-Value: 0
Query Start/End: Original strand, 1 - 808
Target Start/End: Complemental strand, 17645854 - 17645047
Alignment:
| Q |
1 |
ttggtgacagtaaaggtctataaggtgactgaggggatatatgattcatgttactttttggtgaagtcaacataaattcagaagtttgtgatagaggttc |
100 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17645854 |
ttggtgacagtaaaggtctatgaggtgattgaggggatatatgattcatgttactttttggtgaagtcaacataaattcagaagtttgtgatagaggttc |
17645755 |
T |
|
| Q |
101 |
cgtttgtgaggaagaatatccattcacaagctggttgcttatattcataggcaaagttgaactcgtagcattcagaaacactgaaggattagacacattt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17645754 |
cgtttgtgaggaagaatatccattcacaagctggttgcttatattcataggcaaagttgaactcgtagcattcagaaacactgaaggattagacacattt |
17645655 |
T |
|
| Q |
201 |
gtttgtgttgaaggaaaaccaatcacaagttggttactaccatttgtttgtgaagaatgaaaaccattaacaacttggttactaccattcataggataca |
300 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17645654 |
gtttgtgttgaaggaaaaccattcacaagttggttactaccatttgtttgtgaagaatgaaaaccattaacaacttggttactaccattcataggataca |
17645555 |
T |
|
| Q |
301 |
aatgttcctgagattgaattattggctgatgttgaacatttatattgttgaatacttttggttgaggagggcatagttgaaactggttacctcttgaatt |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
17645554 |
aatgttcctgagattgaattattggctgatgttgaacatttatattgttgaatacttttggttgaggaggccatagttgaaactggttacctcttgaatt |
17645455 |
T |
|
| Q |
401 |
acccaagttcaatgttggatcttgaaagtttctcatgaaagaagaaactggagactcaacaagattattttgtgagttgtaaacaatagaaggacgagta |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||| |
|
|
| T |
17645454 |
acccaagttcaatgttggatcttgaaagtttctcatgaaagaagaaactggagactcaacaagattattctgtgaattgtaaacaagagaaggacgagta |
17645355 |
T |
|
| Q |
501 |
ataggttgcacataatgtcctagcagcgcattgtatggagcttgtgaaggaggtactggagccggaaccttaaccgaaattggtatcctcacagtggaca |
600 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17645354 |
ataggttgcacatgatgtcctagcagcgcattgtatggagcttgtgaaggaggtactggagccggaaccttaaccgaaattggtatcctcacagtggaca |
17645255 |
T |
|
| Q |
601 |
atggtggaggccgaatcttctgcaaccttgtgacattttcctgatattttggtgaggaagggaaaccattcacaagttggttattggtgttaacattaaa |
700 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17645254 |
atggtggaggccgaatcttctgcaaccttgtgacattttcctgatattttggtgaggaagggaaaccattcacaagttggttattggtgttaacattaaa |
17645155 |
T |
|
| Q |
701 |
agttggattggtagcatgaaaagacgttgaaagattggacacatttgtttgtgttgaagggaagcctttcacaagttggttactgtaatttgtttgtgag |
800 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17645154 |
agttggattggtagcatgaaaagacgttgaaagattggacacatttgtttgtgttgaagggaagcctttcacaagttggttactgtaatttgtttgtgag |
17645055 |
T |
|
| Q |
801 |
gaatgaat |
808 |
Q |
| |
|
|||||||| |
|
|
| T |
17645054 |
gaatgaat |
17645047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 241 - 805
Target Start/End: Original strand, 16480667 - 16481231
Alignment:
| Q |
241 |
catttgtttgtgaagaatgaaaaccattaacaacttggttactaccattcataggatacaaatgttcctgagattgaattattggctgatgttgaacatt |
340 |
Q |
| |
|
|||||||||||| ||| |||||||||| || |||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| ||| |||| |
|
|
| T |
16480667 |
catttgtttgtgttgaaggaaaaccattgacgacttggttactaccattcgaaggataataatattcctgagattggattattggctgatattgcgcatt |
16480766 |
T |
|
| Q |
341 |
tatattgttgaatacttttggttgaggagggcatagttgaaactggttacctcttgaattacccaagttcaatgttggatcttgaaagtttctcatgaaa |
440 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||| | | || |||| ||| || |||||| |||||||||||||| |
|
|
| T |
16480767 |
tatattgttgaatacttgtggttgaggagggcaaacttgaaattggttacctcttgaataatcaaatttcattgtagggtcttgagagtttctcatgaaa |
16480866 |
T |
|
| Q |
441 |
gaagaaactggagactcaacaagattattttgtgagttgtaaacaatagaaggacgagtaataggttgcacataatgtcctagcagcgcattgtatggag |
540 |
Q |
| |
|
| ||| | |||| |||| ||||||||||||||| ||||||||| ||| ||||| | |||||| |||||||| || ||||| | | ||||||||||| |
|
|
| T |
16480867 |
gcagacattggaaactcgacaagattattttgtatattgtaaacagtaggaggacaattaatagattgcacatgattccctagaattgtattgtatggag |
16480966 |
T |
|
| Q |
541 |
cttgtgaaggaggtactggagccggaaccttaaccgaaattggtatcctcacagtggacaatggtggaggccgaatcttctgcaaccttgtgacattttc |
640 |
Q |
| |
|
||||||| |||||| || | || |||| | |||| ||||||| ||| ||| ||||||||||||||||||| || || ||||||||||| || | ||| |
|
|
| T |
16480967 |
cttgtgagtgaggtattgctgtcgaaaccatgaccggaattggtggccttacaatggacaatggtggaggccgcatattttgcaaccttgtaacctcttc |
16481066 |
T |
|
| Q |
641 |
ctgatattttggtgaggaagggaaaccattcacaagttggttattggtgttaacattaaaagttggattggtagcatgaaaagacgttgaaagattggac |
740 |
Q |
| |
|
||| ||||| ||| | |||| |||||||||||||||||||||||| |||||||||| ||| || |||||||| ||| ||||||||||||| |||| | | |
|
|
| T |
16481067 |
ttgagattttcgtgtgtaaggaaaaccattcacaagttggttattgttgttaacattgaaattttgattggtaccattaaaagacgttgaaggattagcc |
16481166 |
T |
|
| Q |
741 |
acatttgtttgtgttgaagggaagcctttcacaagttggttactgtaatttgtttgtgaggaatg |
805 |
Q |
| |
|
| |||||||||| ||||||| || || |||| |||||||||| | |||||||||||||||||| |
|
|
| T |
16481167 |
atatttgtttgtattgaaggaaaaccattcagaagttggttattagcatttgtttgtgaggaatg |
16481231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 337 - 807
Target Start/End: Complemental strand, 17605437 - 17604967
Alignment:
| Q |
337 |
catttatattgttgaatacttttggttgaggagggcatagttgaaactggttacctcttgaattacccaagttcaatgttggatcttgaaagtttctcat |
436 |
Q |
| |
|
||||||||||||| ||||||| ||||||| ||||| | || | |||||||||||||||||||| | | ||||||| |||||| ||||||| ||||||||| |
|
|
| T |
17605437 |
catttatattgtttaatacttgtggttgaagagggtaaaggttaaactggttacctcttgaatcatcaaagttcattgttgggtcttgaacgtttctcat |
17605338 |
T |
|
| Q |
437 |
gaaagaagaaactggagactcaacaagattattttgtgagttgtaaacaatagaaggacgagtaataggttgcacataatgtcctagcagcgcattgtat |
536 |
Q |
| |
|
||||| ||| |||||| |||||||||||||||||| ||| ||||||||||||| ||| | ||||||||| ||||| ||||||||| || | ||||||| |
|
|
| T |
17605337 |
gaaagcagacactggaaactcaacaagattattttctgaattgtaaacaataggtggaaaattaataggttccacatgatgtcctagaagtgtattgtat |
17605238 |
T |
|
| Q |
537 |
ggagcttgtgaaggaggtactggagccggaaccttaaccgaaattggtatcctcacagtggacaatggtggaggccgaatcttctgcaaccttgtgacat |
636 |
Q |
| |
|
||||||||||||||||||||||| | |||| |||||| ||| ||| ||| ||| ||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
17605237 |
ggagcttgtgaaggaggtactggttttgaaaccataaccggaatcggttgccttacaatggacaatggtggaggccgaatcttctgcaaccttgtaacca |
17605138 |
T |
|
| Q |
637 |
tttcctgatattttggtgaggaagggaaaccattcacaagttggttattggtgttaacattaaaagttggattggtagcatgaaaagacgttgaaagatt |
736 |
Q |
| |
|
|||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||||||| ||| || |||||||| ||| || | || ||||| ||| |
|
|
| T |
17605137 |
tttcctgagattttggtgtggaagagaaaccattcacaagttggttattgttgttaacatggaaaatttgattggtaccattaagatacattgaattatt |
17605038 |
T |
|
| Q |
737 |
ggacacatttgtttgtgttgaagggaagcctttcacaagttggttactgtaatttgtttgtgaggaatgaa |
807 |
Q |
| |
|
| || ||||||||||||||||||||| || |||| || ||||||| | |||||||||| ||||||||| |
|
|
| T |
17605037 |
agccatatttgtttgtgttgaagggaaaccattcagaatttggttattagcatttgtttgtaaggaatgaa |
17604967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 180; E-Value: 9e-97
Query Start/End: Original strand, 261 - 804
Target Start/End: Complemental strand, 17632096 - 17631553
Alignment:
| Q |
261 |
aaaccattaacaacttggttactaccattcataggatacaaatgttcctgagattgaattattggctgatgttgaacatttatattgttgaatacttttg |
360 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||| ||| ||| |||||||||||||||||||||| |||| ||||||| ||||||||||||| || |
|
|
| T |
17632096 |
aaaccattcacaacttggttactaccattcagaggatcgtaatattcatgagattgaattattggctgatattgagcatttatgttgttgaatacttgtg |
17631997 |
T |
|
| Q |
361 |
gttgaggagggcatagttgaaactggttacctcttgaattacccaagttcaatgttggatcttgaaagtttctcatgaaagaagaaactggagactcaac |
460 |
Q |
| |
|
|||||| |||| | ||||||||| ||||| ||||||||| | | ||||||| | |||| |||||||||||||||||||||| || | ||||||||||| |
|
|
| T |
17631996 |
gttgagcagggtaaagttgaaacgggttaactcttgaatcatcaaagttcattattgggtcttgaaagtttctcatgaaagctgacaatggagactcaat |
17631897 |
T |
|
| Q |
461 |
aagattattttgtgagttgtaaacaatagaaggacgagtaataggttgcacataatgtcctagcagcgcattgtatggagcttgtgaaggaggtactgga |
560 |
Q |
| |
|
||||||||| ||||||| |||||| ||| ||||| | ||| || |||||||| || || ||| || | ||||| |||||||||||||||||||| ||| |
|
|
| T |
17631896 |
gagattatttggtgagttataaacattaggaggactattaacagattgcacatgatttcttagaagtgtattgtttggagcttgtgaaggaggtagtggt |
17631797 |
T |
|
| Q |
561 |
gccggaaccttaaccgaaattggtatcctcacagtggacaatggtggaggccgaatcttctgcaaccttgtgacattttcctgatattttggtgaggaag |
660 |
Q |
| |
|
| || |||| || | ||||| | ||| ||| |||||||||| |||||||||| ||| ||||||||||| | |||||| || | |||||| | ||| |
|
|
| T |
17631796 |
gtcgaaaccacgactggaattgatggccttacaatggacaatggcggaggccgaaccttttgcaaccttgtaagcttttcccgagactttggtatgtaag |
17631697 |
T |
|
| Q |
661 |
ggaaaccattcacaagttggttattggtgttaacattaaaagttggattggtagcatgaaaagacgttgaaagattggacacatttgtttgtgttgaagg |
760 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||||| |||||||| || || |||| ||||| |||| | ||||||||||||| |||||| |
|
|
| T |
17631696 |
ggaacccattcacaagttggttattgttgttaacattaaaagtttgattggtacaattaagagacattgaaggattagccacatttgtttgtaatgaagg |
17631597 |
T |
|
| Q |
761 |
gaagcctttcacaagttggttactgtaatttgtttgtgaggaat |
804 |
Q |
| |
|
||| || || | ||||||| || | ||||||||||||||||| |
|
|
| T |
17631596 |
gaaaccattgagaagttgggtattagcatttgtttgtgaggaat |
17631553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 184 - 510
Target Start/End: Original strand, 17663948 - 17664273
Alignment:
| Q |
184 |
aaggattagacacatttgtttgtgttgaaggaaaaccaatcacaagttggttactaccatttgtttgtgaagaatgaaaaccattaacaacttggttact |
283 |
Q |
| |
|
||||||||||||| ||| ||||||| |||| |||||| |||||||||||||| | ||||||||||||| | ||| |||||||| |||| ||||||||| |
|
|
| T |
17663948 |
aaggattagacacgttttcttgtgttaaagggaaaccattcacaagttggttattgtcatttgtttgtgaggtatggaaaccattcacaagttggttact |
17664047 |
T |
|
| Q |
284 |
accattcataggatacaaatgttcctgagattgaattattggctgatgttgaacatttatattgttgaatacttttggttgaggagggcatagttgaaac |
383 |
Q |
| |
|
||||||||||||||| ||||||||| || |||||||||||| || ||| |||| || |||||||||||||| ||||||| ||||| | ||||||| |
|
|
| T |
17664048 |
accattcataggataatgatgttcctggtatggaattattggctaatattggacatctaaattgttgaatacttgtggttgatgagggtaggtttgaaac |
17664147 |
T |
|
| Q |
384 |
tggttacctcttgaattacccaagttcaatgttggatcttgaaagtttctcatgaaagaagaaactggagactcaacaagattattttgtgagttgtaaa |
483 |
Q |
| |
|
|||||||||||||||||| || |||| ||| ||||||||| ||||||||||||| ||||| ||||||||||| ||||||||||| ||| ||||||| |
|
|
| T |
17664148 |
tggttacctcttgaatta-tcatattcatcattgaatcttgaaattttctcatgaaagcagaaattggagactcaaaaagattattttctgaattgtaaa |
17664246 |
T |
|
| Q |
484 |
caatagaaggacgagtaataggttgca |
510 |
Q |
| |
|
||| || | ||| || ||||||||||| |
|
|
| T |
17664247 |
caaaaggatgaccagaaataggttgca |
17664273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 165 - 508
Target Start/End: Complemental strand, 17650130 - 17649787
Alignment:
| Q |
165 |
gtagcattcagaaacactgaaggattagacacatttgtttgtgttgaaggaaaaccaatcacaagttggttactaccatttgtttgtgaagaatgaaaac |
264 |
Q |
| |
|
|||||| || || ||| ||||||||||||||| ||| |||||||||||| |||||| |||||| ||||||| | ||||||||||||| | ||| |||| |
|
|
| T |
17650130 |
gtagcaatcggagacattgaaggattagacacgttttcttgtgttgaagggaaaccattcacaacttggttattgtcatttgtttgtgaggcatggaaac |
17650031 |
T |
|
| Q |
265 |
cattaacaacttggttactaccattcataggatacaaatgttcctgagattgaattattggctgatgttgaacatttatattgttgaatacttttggttg |
364 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||| ||||||||| || | |||||||| |||| ||| |||| || |||||||| ||||| |||||| |
|
|
| T |
17650030 |
cattcacaagttggttactaccattcataggataatgatgttcctggtatgggattattggttgatattggacatctaaattgttgactacttgtggttg |
17649931 |
T |
|
| Q |
365 |
aggagggcatagttgaaactggttacctcttgaattacccaagttcaatgttggatcttgaaagtttctcatgaaagaagaaactggagactcaacaaga |
464 |
Q |
| |
|
| ||||| | ||||||||||| ||||||||||||| | | |||| ||| ||||||||| ||||||||||||| ||||| |||||| || |||||| |
|
|
| T |
17649930 |
atgagggaaaggttgaaactggctacctcttgaattgtcatatttcatcattgaatcttgaaattttctcatgaaagcagaaattggagattcgacaaga |
17649831 |
T |
|
| Q |
465 |
ttattttgtgagttgtaaacaatagaaggacgagtaataggttg |
508 |
Q |
| |
|
||||||| ||| |||||||||| || ||||| |||||| ||||| |
|
|
| T |
17649830 |
ttattttctgaattgtaaacaaaaggaggaccagtaattggttg |
17649787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 275 - 631
Target Start/End: Original strand, 20751374 - 20751730
Alignment:
| Q |
275 |
ttggttactaccattcataggatacaaatgttcctgagattgaattattggctgatgttgaacatttatattgttgaatacttttggttgaggagggcat |
374 |
Q |
| |
|
||||| |||||||||||||||||| ||| ||| |||||||| |||||||||||| ||||||||||||||||||||||| || ||||||| ||||| | |
|
|
| T |
20751374 |
ttggtcactaccattcataggataataatattcttgagattgggttattggctgatattgaacatttatattgttgaataattgtggttgatgagggtaa |
20751473 |
T |
|
| Q |
375 |
agttgaaactggttacctcttgaattacccaagttcaatgttggatcttgaaagtttctcatgaaagaagaaactggagactcaacaagattattttgtg |
474 |
Q |
| |
|
||||||| ||||||||| ||||||| | ||| ||| ||| |||||||||||||||||||||| ||||| || |||||| |||||||||||||| |
|
|
| T |
20751474 |
ggttgaaaatggttaccttctgaattatcaaagctcatatttgactcttgaaagtttctcatgaaagcagaaattgaagactcgtcaagattattttgta |
20751573 |
T |
|
| Q |
475 |
agttgtaaacaatagaaggacgagtaataggttgcacataatgtcctagcagcgcattgtatggagcttgtgaaggaggtactggagccggaaccttaac |
574 |
Q |
| |
|
| |||| ||| | || ||||| ||||| || ||||||| ||||||||| | | || |||||||| ||||||||||| |||| ||||||||| ||| |
|
|
| T |
20751574 |
aattgttaactagaggaggaccagtaaaagactgcacatgatgtcctagaaatgtgttatatggagcagttgaaggaggtaatggatccggaacctgaac |
20751673 |
T |
|
| Q |
575 |
cgaaattggtatcctcacagtggacaatggtggaggccgaatcttctgcaaccttgt |
631 |
Q |
| |
|
||||||||| ||||||| ||||||| |||||||| ||| | |||||||||||||| |
|
|
| T |
20751674 |
tgaaattggtggcctcacaatggacaaaggtggaggtcgatttttctgcaaccttgt |
20751730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 183 - 485
Target Start/End: Original strand, 17676238 - 17676540
Alignment:
| Q |
183 |
gaaggattagacacatttgtttgtgttgaaggaaaaccaatcacaagttggttactaccatttgtttgtgaagaatgaaaaccattaacaacttggttac |
282 |
Q |
| |
|
|||||||||| ||||||| ||||||||||| |||||| |||||| ||||||| | |||||||||| || | ||| |||| ||| |||| |||||||| |
|
|
| T |
17676238 |
gaaggattaggcacattttcatgtgttgaagggaaaccattcacaacttggttattgtcatttgtttgggaggcatggaaactattcacaagttggttac |
17676337 |
T |
|
| Q |
283 |
taccattcataggatacaaatgttcctgagattgaattattggctgatgttgaacatttatattgttgaatacttttggttgaggagggcatagttgaaa |
382 |
Q |
| |
|
|||||||||||||||| ||||||||| || |||||||||| |||| ||| |||| || |||||||| ||||| ||||||| ||||| | ||||||| |
|
|
| T |
17676338 |
taccattcataggataatgatgttcctggtatggaattattggttgatattggacatctaaattgttgactacttgtggttgatgagggaaaggttgaaa |
17676437 |
T |
|
| Q |
383 |
ctggttacctcttgaattacccaagttcaatgttggatcttgaaagtttctcatgaaagaagaaactggagactcaacaagattattttgtgagttgtaa |
482 |
Q |
| |
|
|||||||||||||||||| | |||||| ||| ||||||||| | ||||||||||| ||||| ||||||||| ||||||||||||| ||| |||||| |
|
|
| T |
17676438 |
ctggttacctcttgaattgtcatagttcatcattgaatcttgaaattctctcatgaaagcagaaattggagactcgacaagattattttctgaattgtaa |
17676537 |
T |
|
| Q |
483 |
aca |
485 |
Q |
| |
|
||| |
|
|
| T |
17676538 |
aca |
17676540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 182 - 576
Target Start/End: Original strand, 16481154 - 16481551
Alignment:
| Q |
182 |
tgaaggattagacacatttgtttgtgttgaaggaaaaccaatcacaagttggttactaccatttgtttgtgaagaatgaaaaccattaacaacttggtta |
281 |
Q |
| |
|
||||||||||| || |||||||||| |||||||||||||| ||| |||||||||| || ||||||||||||| ||||| |||| ||| |||| ||||||| |
|
|
| T |
16481154 |
tgaaggattagccatatttgtttgtattgaaggaaaaccattcagaagttggttattagcatttgtttgtgaggaatggaaacaattcacaatttggtta |
16481253 |
T |
|
| Q |
282 |
ctaccattcataggatacaaatgttcctgagattgaattattggctgatgttgaacatttatattgttgaatacttttggttgaggagggcatagttgaa |
381 |
Q |
| |
|
|||||||| || ||||| ||||||| || |||| |||||||||||||| |||||||||||| |||||||| |||| || |||| |||| | |||||| |
|
|
| T |
16481254 |
ctaccattaattggataataatgttcatgggatttaattattggctgatattgaacatttatgttgttgaagacttgtgattgatgaggataaggttgaa |
16481353 |
T |
|
| Q |
382 |
actggttacctcttgaattacccaagttcaatgttgga-----tcttgaaagtttctcatgaaagaagaaactggagactcaacaagattattttgtgag |
476 |
Q |
| |
|
|||| ||||||| ||||||||| | |||| ||| ||| |||||| |||||||||| ||||||| | |||| ||| |||||||||| | || || |
|
|
| T |
16481354 |
actgattacctcctgaattaccaatgttcgatg--ggagtatgtcttgagagtttctcatcgaagaagatattggaaacttaacaagattactatgcgaa |
16481451 |
T |
|
| Q |
477 |
ttgtaaacaatagaagg--acgagtaataggttgcacataatgtcctagcagcgcattgtatggagcttgtgaaggaggtactggagccggaaccttaac |
574 |
Q |
| |
|
|||| |||| |||||| || || ||||| |||||| |||| || | || ||||||||| | ||||||||||||||| |||||||| ||||| ||| |
|
|
| T |
16481452 |
ttgtcaaca--agaaggttaccggtgataggctgcacaagatgtgctggaagtgcattgtatagcgcttgtgaaggaggtcttggagccgaaacctgaac |
16481549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 188 - 563
Target Start/End: Complemental strand, 17605040 - 17604662
Alignment:
| Q |
188 |
attagacacatttgtttgtgttgaaggaaaaccaatcacaagttggttactaccatttgtttgtgaagaatgaaaaccattaacaacttggttactacca |
287 |
Q |
| |
|
||||| || |||||||||||||||||| |||||| ||| || ||||||| || ||||||||||| | ||||||||| |||| |||| ||||||||||||| |
|
|
| T |
17605040 |
attagccatatttgtttgtgttgaagggaaaccattcagaatttggttattagcatttgtttgtaaggaatgaaaatcattcacaaattggttactacca |
17604941 |
T |
|
| Q |
288 |
ttcataggatacaaatgttcctgagattgaattattggctgatgttgaacatttatattgttgaatacttttggttgaggagggcatagttgaaactggt |
387 |
Q |
| |
|
|| ||||||| ||||||| ||||||| ||||||||| |||| ||||| ||||||||||||||| |||| || |||| ||||| | | |||||||| | |
|
|
| T |
17604940 |
ttagtaggataataatgttcttgagatttaattattggatgatattgaaaatttatattgttgaagacttgtgattgatgagggtaaggctgaaactgat |
17604841 |
T |
|
| Q |
388 |
tacctcttgaattacccaagttcaatg---ttggatcttgaaagtttctcatgaaagaagaaactggagactcaacaagattattttgtgagttgtaaac |
484 |
Q |
| |
|
|||||| ||||||||| | ||||| | | | |||||| |||||||||| |||||||| | |||| ||||||||| |||| ||||||| || | ||| |
|
|
| T |
17604840 |
tacctcctgaattaccaatgttcagcggaaataggtcttgagagtttctcatcaaagaagatattggaaactcaacaatattactttgtgaattttcaac |
17604741 |
T |
|
| Q |
485 |
aatagaaggacgagtaataggttgcacataatgtcctagcagcgcattgtatggagcttgtgaaggaggtactggagcc |
563 |
Q |
| |
|
|| | | || |||||||| |||| | || | || | || ||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
17604740 |
aagatgattaccggtaataggctgcataggatatactggaagtgcattgtatagagcctgtgaaggaggtactggagcc |
17604662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 182 - 519
Target Start/End: Complemental strand, 17645127 - 17644787
Alignment:
| Q |
182 |
tgaaggattagacacatttgtttgtgttgaaggaaaaccaatcacaagttggttactaccatttgtttgtgaagaatgaaaaccattaacaacttggtta |
281 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||| || || |||||||||||||||| |||||||||||| ||||||| |||||| |||| |||| || |
|
|
| T |
17645127 |
tgaaagattggacacatttgtttgtgttgaagggaagcctttcacaagttggttactgtaatttgtttgtgaggaatgaataccattcacaagttggcta |
17645028 |
T |
|
| Q |
282 |
ctaccattcataggatacaaatgttcctgagattgaattattggctgatgttgaacatttatattgttgaatacttttggttgaggagggcatagttgaa |
381 |
Q |
| |
|
||| ||| |||||||| |||||| |||||||||| |||||| |||| |||||||||| ||||||| || ||| || |||||||||| | |||| | |
|
|
| T |
17645027 |
ctatgattgataggataataatgtttttgagattgaaatattggatgattttgaacatttgtattgttcaaggcttgtgattgaggagggtaaggttgga |
17644928 |
T |
|
| Q |
382 |
actggttacctcttgaattacccaagttca---atgttggatcttgaaagtttctcatgaaagaagaaactggagactcaacaagattattttgtgagtt |
478 |
Q |
| |
|
|||||||||||||||||||||| | ||||| |||| |||||||||||||||||| ||| ||| |||||| || || ||||||| ||||||| || |
|
|
| T |
17644927 |
actggttacctcttgaattaccaatgttcagcggcgttgagtcttgaaagtttctcatggaagtagatactggaaacccagaaagattactttgtgaatt |
17644828 |
T |
|
| Q |
479 |
gtaaacaatagaaggacgagtaataggttgcacataatgtc |
519 |
Q |
| |
|
|| ||||| ||||| || |||||| ||||||| ||||| |
|
|
| T |
17644827 |
gttaacaaggagaggaccagaaataggatgcacatgatgtc |
17644787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 275 - 631
Target Start/End: Original strand, 17950001 - 17950357
Alignment:
| Q |
275 |
ttggttactaccattcataggatacaaatgttcctgagattgaattattggctgatgttgaacatttatattgttgaatacttttggttgaggagggcat |
374 |
Q |
| |
|
||||| ||| |||||||||||||| ||| ||| |||||||| ||||||| | || ||| ||||||||||||||||||| || ||||||| ||||| | |
|
|
| T |
17950001 |
ttggtcactgccattcataggataataatattcttgagattgggttattggattatattggacatttatattgttgaataattgtggttgatgagggtaa |
17950100 |
T |
|
| Q |
375 |
agttgaaactggttacctcttgaattacccaagttcaatgttggatcttgaaagtttctcatgaaagaagaaactggagactcaacaagattattttgtg |
474 |
Q |
| |
|
||||||| |||||||| ||||||||| ||||||| ||| |||||||||||||||||||||| ||||| ||||||||| |||||||||| |||| |
|
|
| T |
17950101 |
ggttgaaaagggttaccttatgaattaccaaagttcatatttgactcttgaaagtttctcatgaaagcagaaattggagactcgtcaagattattctgtg |
17950200 |
T |
|
| Q |
475 |
agttgtaaacaatagaaggacgagtaataggttgcacataatgtcctagcagcgcattgtatggagcttgtgaaggaggtactggagccggaaccttaac |
574 |
Q |
| |
|
| |||| ||| | || ||||| ||||| | ||||||| ||||||| | | || || |||||||| |||||||| | || || | ||||| ||| ||| |
|
|
| T |
17950201 |
aattgttaactagaggaggactagtaacatactgcacatgatgtcctggaaatgcgttatatggagcctgtgaaggcgataatgcatccggagcctgaac |
17950300 |
T |
|
| Q |
575 |
cgaaattggtatcctcacagtggacaatggtggaggccgaatcttctgcaaccttgt |
631 |
Q |
| |
|
||| ||| ||||||| |||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
17950301 |
taaaaccggtggcctcacaatggacaatggtggaggtcgattcttctgcaaccttgt |
17950357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 275 - 631
Target Start/End: Original strand, 17953853 - 17954209
Alignment:
| Q |
275 |
ttggttactaccattcataggatacaaatgttcctgagattgaattattggctgatgttgaacatttatattgttgaatacttttggttgaggagggcat |
374 |
Q |
| |
|
||||| ||| |||||||||||||| ||| ||| |||||||| ||||||| | || ||| ||||||||||||||||||| || ||||||| ||||| | |
|
|
| T |
17953853 |
ttggtcactgccattcataggataataatattcttgagattgggttattggattatattggacatttatattgttgaataattgtggttgatgagggtaa |
17953952 |
T |
|
| Q |
375 |
agttgaaactggttacctcttgaattacccaagttcaatgttggatcttgaaagtttctcatgaaagaagaaactggagactcaacaagattattttgtg |
474 |
Q |
| |
|
||||||| |||||||| ||||||||| ||||||| ||| |||||||||||||||||||||| ||||| ||||||||| |||||||||| |||| |
|
|
| T |
17953953 |
ggttgaaaagggttaccttatgaattaccaaagttcatatttgactcttgaaagtttctcatgaaagcagaaattggagactcgtcaagattattctgtg |
17954052 |
T |
|
| Q |
475 |
agttgtaaacaatagaaggacgagtaataggttgcacataatgtcctagcagcgcattgtatggagcttgtgaaggaggtactggagccggaaccttaac |
574 |
Q |
| |
|
| |||| ||| | || ||||| ||||| | ||||||| ||||||| | | || || |||||||| |||||||| | || || | ||||| ||| ||| |
|
|
| T |
17954053 |
aattgttaactagaggaggactagtaacatactgcacatgatgtcctggaaatgcgttatatggagcctgtgaaggcgataatgcatccggagcctgaac |
17954152 |
T |
|
| Q |
575 |
cgaaattggtatcctcacagtggacaatggtggaggccgaatcttctgcaaccttgt |
631 |
Q |
| |
|
||| ||| ||||||| |||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
17954153 |
taaaaccggtggcctcacaatggacaatggtggaggtcgattcttctgcaaccttgt |
17954209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 182 - 403
Target Start/End: Complemental strand, 17631629 - 17631408
Alignment:
| Q |
182 |
tgaaggattagacacatttgtttgtgttgaaggaaaaccaatcacaagttggttactaccatttgtttgtgaagaatgaaaaccattaacaacttggtta |
281 |
Q |
| |
|
||||||||||| ||||||||||||| |||||| |||||| | | ||||||| || || ||||||||||||| |||| ||||||| |||| |||||| |
|
|
| T |
17631629 |
tgaaggattagccacatttgtttgtaatgaagggaaaccattgagaagttgggtattagcatttgtttgtgaggaattggaaccattcacaaattggttg |
17631530 |
T |
|
| Q |
282 |
ctaccattcataggatacaaatgttcctgagattgaattattggctgatgttgaacatttatattgttgaatacttttggttgaggagggcatagttgaa |
381 |
Q |
| |
|
|||||||| |||||||| ||||||| |||||| ||||||||| | || ||||||||||||||||||||| |||| || |||| |||| | ||||| |
|
|
| T |
17631529 |
ctaccattaataggataataatgttcttgagatgtaattattggattatattgaacatttatattgttgaagacttgtgattgattagggtaagattgaa |
17631430 |
T |
|
| Q |
382 |
actggttacctcttgaattacc |
403 |
Q |
| |
|
|||| ||||||| ||||||||| |
|
|
| T |
17631429 |
actgattacctcctgaattacc |
17631408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 17605725 - 17605450
Alignment:
| Q |
1 |
ttggtgacagtaaaggtctataaggtgactgaggggatatatgattcatgttactttttggtgaagtcaacataaattcagaagtttgtgatagaggttc |
100 |
Q |
| |
|
||||||| || ||||| |||||||||| || |||||||| |||||||||||| || ||||| | ||||||||||| ||||||| ||||||| || || |
|
|
| T |
17605725 |
ttggtgatagcaaaggcttataaggtgattggggggatatgaaattcatgttactcttcggtgatggcaacataaatttagaagttggtgatagggggtc |
17605626 |
T |
|
| Q |
101 |
c---gtttgtgaggaagaatatccattcacaagctggttgcttatattcataggcaaagttgaactcgtagcattcagaaacactgaaggattagacaca |
197 |
Q |
| |
|
||||||||||||||| | ||| ||||| | ||||| | |||||| ||||||| | |||||||||||| | |||||||||||||||||| |
|
|
| T |
17605625 |
atttgtttgtgaggaagaaaaaccaatcacaggttggttacggtcgttcatataaaaagttgggttggtagcattcagagatactgaaggattagacaca |
17605526 |
T |
|
| Q |
198 |
tttgtttgtgttgaaggaaaaccaatcacaagttggttactaccatttgtttgtgaagaatgaaaaccattaacaa |
273 |
Q |
| |
|
||||||||||| ||||| |||||| ||||||||| ||| | ||||||||||||||||||| |||||||| |||| |
|
|
| T |
17605525 |
tttgtttgtgtcgaagggaaaccattcacaagttcattaatgacatttgtttgtgaagaatggaaaccattcacaa |
17605450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 17632314 - 17632068
Alignment:
| Q |
1 |
ttggtgacagtaaaggtctataaggtgactgaggggatatatgattcatgttactttttggtgaagtcaacataaattcagaagtttgtgatagaggttc |
100 |
Q |
| |
|
||||||| |||| | | |||||||||||||| ||||||| |||||||||| ||| |||||||| ||| ||||||||| ||||| ||||||| || || |
|
|
| T |
17632314 |
ttggtgatagtagatgcctataaggtgactggggggataggaaattcatgttattttctggtgaaggcaatataaattcaaaagttggtgatagggggtc |
17632215 |
T |
|
| Q |
101 |
c---gtttgtgaggaagaatatccattcacaagctggttgcttatattcataggcaaagttgaactcgtagcattcagaaacactgaaggattagacaca |
197 |
Q |
| |
|
||||||||||||||| | || ||||||| ||||| | ||||||| | ||||| | | |||||||||||| |||||||||||||||||| | |
|
|
| T |
17632214 |
atttgtttgtgaggaagaaaaatcaatcacaagttggttattgtcgttcatagagagagttggattggtagcattcagagacactgaaggattagacata |
17632115 |
T |
|
| Q |
198 |
tttgtttgtgttgaaggaaaaccaatcacaagttggttactaccatt |
244 |
Q |
| |
|
||| ||||||||||||| |||||| |||||| ||||||||||||||| |
|
|
| T |
17632114 |
tttatttgtgttgaagggaaaccattcacaacttggttactaccatt |
17632068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 16480370 - 16480610
Alignment:
| Q |
1 |
ttggtgacagtaaaggtctataaggtgactgaggggatatatgattcatgttactttttggtgaagtcaacataaattcagaagtttgtgatagaggttc |
100 |
Q |
| |
|
||||||| |||| ||| |||||||||||||| ||||||| ||||||||| |||| ||||||| ||||||||||||| || || ||||| | || || |
|
|
| T |
16480370 |
ttggtgatagtagaggcctataaggtgactggggggataggaaattcatgttgtttttcggtgaaggcaacataaattcaaaatttggtgatggggggtc |
16480469 |
T |
|
| Q |
101 |
c---gtttgtgaggaagaatatccattcacaagctggttgcttatattcataggcaaagttgaactcgtagcattcagaaacactgaaggattagacaca |
197 |
Q |
| |
|
||||||||||||||| | ||| ||||| | ||||| || |||||||||||||||| | | |||||||||||| ||| |||| |||||||||| |
|
|
| T |
16480470 |
atttgtttgtgaggaagaaaaaccaatcacaggttggttactatcgttcataggcaaagttggattggtagcattcagagtcaccgaagaattagacaca |
16480569 |
T |
|
| Q |
198 |
tttgtttgtgttgaaggaaaaccaatcacaagttggttact |
238 |
Q |
| |
|
|||||||||| |||| ||||||||||||| |||||||||| |
|
|
| T |
16480570 |
tttgtttgtgaggaagaaaaaccaatcacaggttggttact |
16480610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 275 - 519
Target Start/End: Complemental strand, 18766710 - 18766466
Alignment:
| Q |
275 |
ttggttactaccattcataggatacaaatgttcctgagattgaattattggctgatgttgaacatttatattgttgaatacttttggttgaggagggcat |
374 |
Q |
| |
|
||||| ||||||||||||| |||| ||| ||| |||||||| |||||||||||| ||| ||||||||||||||||||| || ||||||| ||||| | |
|
|
| T |
18766710 |
ttggtcactaccattcataagataataatattcttgagattgggttattggctgatattggacatttatattgttgaataattgtggttgatgagggtaa |
18766611 |
T |
|
| Q |
375 |
agttgaaactggttacctcttgaattacccaagttcaatgttggatcttgaaagtttctcatgaaagaagaaactggagactcaacaagattattttgtg |
474 |
Q |
| |
|
||||||| ||||||| ||||||||| ||||||| ||| ||||||||||||||||| |||| ||||| || ||||||| |||||||||| || |
|
|
| T |
18766610 |
ggttgaaaaatgttaccttctgaattaccaaagttcatatttgactcttgaaagtttctcataaaagcagaaattgaagactcatagagattattttatg |
18766511 |
T |
|
| Q |
475 |
agttgtaaacaatagaaggacgagtaataggttgcacataatgtc |
519 |
Q |
| |
|
| |||| ||| | || ||||| ||||| || ||||||| ||||| |
|
|
| T |
18766510 |
aattgttaactagaggaggaccagtaacagactgcacatgatgtc |
18766466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 16480573 - 16480715
Alignment:
| Q |
102 |
gtttgtgaggaagaatatccattcacaagctggttgcttatattcataggcaaagttgaactcgtagcattcagaaacactgaaggattagacacatttg |
201 |
Q |
| |
|
||||||||||||||| | ||| ||||| | ||||| || |||||||||||||||| | | |||||||||||| |||||||| |||||||||||||| |
|
|
| T |
16480573 |
gtttgtgaggaagaaaaaccaatcacaggttggttactgccgttcataggcaaagttggattggtagcattcagagtcactgaagaattagacacatttg |
16480672 |
T |
|
| Q |
202 |
tttgtgttgaaggaaaaccaatcacaagttggttactaccatt |
244 |
Q |
| |
|
|||||||||||||||||||| | || | ||||||||||||||| |
|
|
| T |
16480673 |
tttgtgttgaaggaaaaccattgacgacttggttactaccatt |
16480715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 210 - 462
Target Start/End: Complemental strand, 29883565 - 29883313
Alignment:
| Q |
210 |
gaaggaaaaccaatcacaagttggttactaccatttgtttgtgaagaatgaaaaccattaacaacttggttactaccattcataggatacaaatgttcct |
309 |
Q |
| |
|
||||||||||| ||||| |||||||| |||||||| |||| || || | |||||||| |||| ||| ||||||||||||||||||| | ||| | |
|
|
| T |
29883565 |
gaaggaaaaccgttcacatgttggttaataccatttatttgcgataaaaggaaaccattcacaagctggctactaccattcataggataatattgtggtt |
29883466 |
T |
|
| Q |
310 |
gagattgaattattggctgatgttgaacatttatattgttgaatacttttggttgaggagggcatagttgaaactggttacctcttgaattacccaagtt |
409 |
Q |
| |
|
| |||||||||||| ||| ||||||||| | |||||| ||||||| || ||||| |||| | ||||||||||||||||||||||| || | ||||| |
|
|
| T |
29883465 |
gggattgaattattaattgagattgaacattcacattgttcaatacttgtgattgagtagggtaaggttgaaactggttacctcttgaactatcaaagtt |
29883366 |
T |
|
| Q |
410 |
caatgttggatcttgaaagtttctcatgaaagaagaaactggagactcaacaa |
462 |
Q |
| |
|
|| ||| | |||||| ||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
29883365 |
catcattgagttttgaaaatttctcatgaaagcagaaattggagattcaacaa |
29883313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 652 - 801
Target Start/End: Complemental strand, 17650189 - 17650040
Alignment:
| Q |
652 |
gtgaggaagggaaaccattcacaagttggttattggtgttaacattaaaagttggattggtagcatgaaaagacgttgaaagattggacacatttgtttg |
751 |
Q |
| |
|
|||||||| |||| |||||||||||||||||| || |||| ||| ||| | | |||||||||| |||| ||||| |||| ||||| ||| ||| |
|
|
| T |
17650189 |
gtgaggaaaggaacccattcacaagttggttactgttgttcacaaggaaattcgaattggtagcaatcggagacattgaaggattagacacgttttcttg |
17650090 |
T |
|
| Q |
752 |
tgttgaagggaagcctttcacaagttggttactgtaatttgtttgtgagg |
801 |
Q |
| |
|
|||||||||||| || ||||||| ||||||| ||| |||||||||||||| |
|
|
| T |
17650089 |
tgttgaagggaaaccattcacaacttggttattgtcatttgtttgtgagg |
17650040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 652 - 805
Target Start/End: Complemental strand, 17605617 - 17605464
Alignment:
| Q |
652 |
gtgaggaagggaaaccattcacaagttggttattggtgttaacattaaaagttggattggtagcatgaaaagacgttgaaagattggacacatttgtttg |
751 |
Q |
| |
|
||||||||| |||||| ||||| |||||||| | ||| | || ||||||||| |||||||||| | ||| |||| |||| |||||||||||||| |
|
|
| T |
17605617 |
gtgaggaagaaaaaccaatcacaggttggttacggtcgttcatataaaaagttgggttggtagcattcagagatactgaaggattagacacatttgtttg |
17605518 |
T |
|
| Q |
752 |
tgttgaagggaagcctttcacaagttggttactgtaatttgtttgtgaggaatg |
805 |
Q |
| |
|
||| |||||||| || |||||||||| ||| || |||||||||||| ||||| |
|
|
| T |
17605517 |
tgtcgaagggaaaccattcacaagttcattaatgacatttgtttgtgaagaatg |
17605464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 652 - 784
Target Start/End: Complemental strand, 17632206 - 17632074
Alignment:
| Q |
652 |
gtgaggaagggaaaccattcacaagttggttattggtgttaacattaaaagttggattggtagcatgaaaagacgttgaaagattggacacatttgtttg |
751 |
Q |
| |
|
||||||||| ||| || ||||||||||||||||| ||| | | | ||||||||||||||||| | |||| |||| |||| |||| |||| |||| |
|
|
| T |
17632206 |
gtgaggaagaaaaatcaatcacaagttggttattgtcgttcatagagagagttggattggtagcattcagagacactgaaggattagacatatttatttg |
17632107 |
T |
|
| Q |
752 |
tgttgaagggaagcctttcacaagttggttact |
784 |
Q |
| |
|
|||||||||||| || ||||||| ||||||||| |
|
|
| T |
17632106 |
tgttgaagggaaaccattcacaacttggttact |
17632074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 757
Target Start/End: Complemental strand, 18766839 - 18766729
Alignment:
| Q |
647 |
ttttggtgaggaagggaaaccattcacaagttggttattggtgttaacattaaaagttggattggtagcatgaaaagacgttgaaagattggacacattt |
746 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||| ||| | | ||| |||||||||||| || ||||| ||||||||| ||||||| | |
|
|
| T |
18766839 |
tttttgtgaggaagggaaaccattcaaaagttggttattgtcgttcatagggaaaattggattggtaggattaaaaggaactgaaagattagacacatct |
18766740 |
T |
|
| Q |
747 |
gtttgtgttga |
757 |
Q |
| |
|
|||||||||| |
|
|
| T |
18766739 |
ttttgtgttga |
18766729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 656 - 801
Target Start/End: Original strand, 17663874 - 17664019
Alignment:
| Q |
656 |
ggaagggaaaccattcacaagttggttattggtgttaacattaaaagttggattggtagcatgaaaagacgttgaaagattggacacatttgtttgtgtt |
755 |
Q |
| |
|
||||||||||||||| ||||||| |||| | |||| ||| || | |||||||||||| | |||| || || |||| ||||| ||| ||||||| |
|
|
| T |
17663874 |
ggaagggaaaccattgacaagtttgttactattgttcacaaggaacttcggattggtagcaaccatagacattaaaggattagacacgttttcttgtgtt |
17663973 |
T |
|
| Q |
756 |
gaagggaagcctttcacaagttggttactgtaatttgtttgtgagg |
801 |
Q |
| |
|
||||||| || ||||||||||||||| ||| |||||||||||||| |
|
|
| T |
17663974 |
aaagggaaaccattcacaagttggttattgtcatttgtttgtgagg |
17664019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 18766942 - 18766857
Alignment:
| Q |
1 |
ttggtgacagtaaaggtctataaggtgactgaggggatatatgattcatgttactttttggtgaagtcaacataaattcagaagtt |
86 |
Q |
| |
|
||||||| ||| ||| |||||||||||||||||||||||| |||||||||||||| | ||| | ||||| ||| ||||||||| |
|
|
| T |
18766942 |
ttggtgatagttgagggctataaggtgactgaggggatataaaattcatgttactttctaatgatggcaacaaaaactcagaagtt |
18766857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 461
Target Start/End: Original strand, 29880324 - 29880441
Alignment:
| Q |
344 |
attgttgaatacttttggttgaggagggcatagttgaaactggttacctcttgaattacccaagttcaatgttggatcttgaaagtttctcatgaaagaa |
443 |
Q |
| |
|
|||||| ||||||| || |||||||||| | ||||| |||||||||||||||||| | ||||||| |||| | |||||| ||||||||||||| | |
|
|
| T |
29880324 |
attgttcaatacttgtgattgaggagggtaagactgaaattggttacctcttgaattatcaaagttcatcgttgagttttgaaaatttctcatgaaagca |
29880423 |
T |
|
| Q |
444 |
gaaactggagactcaaca |
461 |
Q |
| |
|
|| ||| |||| |||||| |
|
|
| T |
29880424 |
gacactagagattcaaca |
29880441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 20751159 - 20751227
Alignment:
| Q |
18 |
ctataaggtgactgaggggatatatgattcatgttactttttggtgaagtcaacataaattcagaagtt |
86 |
Q |
| |
|
|||||||||||||||||||||| | || ||||||||||| | |||||| |||| ||||||||||||| |
|
|
| T |
20751159 |
ctataaggtgactgaggggatagaaaatccatgttactttctagtgaaggtaacaaaaattcagaagtt |
20751227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 16475512 - 16475591
Alignment:
| Q |
1 |
ttggtgacagtaaaggtctataaggtgactgaggggatatatgattcatgttactttttggtgaagtcaacataaattca |
80 |
Q |
| |
|
||||||| |||| ||| |||||||||||||| ||||||| ||||||||| |||| ||||||| ||||||||||||| |
|
|
| T |
16475512 |
ttggtgatagtagaggcctataaggtgactggggggataggaaattcatgttgtttttcggtgaaggcaacataaattca |
16475591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 588 - 653
Target Start/End: Original strand, 17676643 - 17676708
Alignment:
| Q |
588 |
ctcacagtggacaatggtggaggccgaatcttctgcaaccttgtgacattttcctgatattttggt |
653 |
Q |
| |
|
|||||| |||||||||||||||| ||| ||||||| |||||||| || || ||||| |||||||| |
|
|
| T |
17676643 |
ctcacaatggacaatggtggaggtcgattcttctgtaaccttgtaaccttagcctgagattttggt |
17676708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 17949778 - 17949863
Alignment:
| Q |
1 |
ttggtgacagtaaaggtctataaggtgactgaggggatatatgattcatgttactttttggtgaagtcaacataaattcagaagtt |
86 |
Q |
| |
|
||||||| ||| ||| |||||||||||||||||| ||| | |||||||||||||| | |||||| ||||| ||| || |||||| |
|
|
| T |
17949778 |
ttggtgatagttgagggctataaggtgactgagggaatagaaaattcatgttactttctagtgaaggcaacaaaaactctgaagtt |
17949863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 17953630 - 17953715
Alignment:
| Q |
1 |
ttggtgacagtaaaggtctataaggtgactgaggggatatatgattcatgttactttttggtgaagtcaacataaattcagaagtt |
86 |
Q |
| |
|
||||||| ||| ||| |||||||||||||||||| ||| | |||||||||||||| | |||||| ||||| ||| || |||||| |
|
|
| T |
17953630 |
ttggtgatagttgagggctataaggtgactgagggaatagaaaattcatgttactttctagtgaaggcaacaaaaactctgaagtt |
17953715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 165 - 281
Target Start/End: Complemental strand, 32670122 - 32670006
Alignment:
| Q |
165 |
gtagcattcagaaacactgaaggattagacacatttgtttgtgttgaaggaaaaccaatcacaagttggttactaccatttgtttgtgaagaatgaaaac |
264 |
Q |
| |
|
|||||||||||| |||||||||||||||||| || |||||||| || || ||||||| | |||||||||||||||||||||| |||||| | ||||||| |
|
|
| T |
32670122 |
gtagcattcagagacactgaaggattagacagatatgtttgtgatggagcaaaaccattgacaagttggttactaccatttgcttgtgatgtgtgaaaac |
32670023 |
T |
|
| Q |
265 |
cattaacaacttggtta |
281 |
Q |
| |
|
||| |||| ||||||| |
|
|
| T |
32670022 |
aattcacaagttggtta |
32670006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 588 - 631
Target Start/End: Complemental strand, 32669717 - 32669674
Alignment:
| Q |
588 |
ctcacagtggacaatggtggaggccgaatcttctgcaaccttgt |
631 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
32669717 |
ctcacaatggacaatggtggaggccgattcttctgcaaccttgt |
32669674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 419 - 475
Target Start/End: Complemental strand, 32669883 - 32669827
Alignment:
| Q |
419 |
atcttgaaagtttctcatgaaagaagaaactggagactcaacaagattattttgtga |
475 |
Q |
| |
|
||||||||| | ||||||||||| ||||| |||||| ||||||||||| |||||||| |
|
|
| T |
32669883 |
atcttgaaaatctctcatgaaagcagaaattggagattcaacaagattgttttgtga |
32669827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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