View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13775_low_25 (Length: 244)
Name: NF13775_low_25
Description: NF13775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13775_low_25 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 41389310 - 41389083
Alignment:
| Q |
1 |
aaaaatggagggcctgatttaacttacttgaaaagtatatactgtggttattcttcttttttggtataaaactatagcaccctactcaacttcaattatg |
100 |
Q |
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| T |
41389310 |
aaaaatggagggcctgatttaacttgcttgaaaagtatatactgtggttattcttcttttttggtataaaactatagcaccctactcaacttcaattatg |
41389211 |
T |
|
| Q |
101 |
attatggagaagcatgtagataaattgaaatgtctttgatttatagttaaagatcaagatcaactgttcaacattaccaattggtaattggtaaaacaaa |
200 |
Q |
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| T |
41389210 |
attatggagaagcatgtagataaattgaaatgtctttgatttatagttaaagatcaagatcaactgttcaacattaccaattggtaattggtaaaacaaa |
41389111 |
T |
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| Q |
201 |
ataaatgaaagaattaactatgccatgt |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
41389110 |
ataaatgaaagaattaactatgccatgt |
41389083 |
T |
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